Citrus Sinensis ID: 022226

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Protein Sequence
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTfiyyrnrtrppltvSIICKIFGLGLISCCVQTCLYvgigyssptlssaivdlTPAFTFILALISRgidcdfvqgastsgSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAernpnswrlkpdtelIAIGCSAFFAVALRSLAHTwachkkgpvyvsmyKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSViwgqseeekmiddkdidslkssspkapllqtksifcrn
Flexible Loop (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDslkssspkapllqtksifcrn
Low Complexity Region (SEG)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSeeekmiddkdidslkssspkapllQTKSIFCRN
Disordered region (IsUnstruct)
**SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISOPRED)
***VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG***********************************
Disordered Region (DISEMBL)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Disordered Region (DISPRO)
*WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS*********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSIFCRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	300	2.2.26 [Sep-21-2011]
Q94JU2	367	WAT1-related protein At3g	yes	no	0.95	0.776	0.393	1e-54
Q945L4	339	WAT1-related protein At5g	no	no	0.933	0.825	0.373	1e-47
F4JK59	347	WAT1-related protein At4g	no	no	0.89	0.769	0.380	3e-44
Q9FL08	368	WAT1-related protein At5g	no	no	0.923	0.752	0.330	3e-37
Q9LV20	383	WAT1-related protein At3g	no	no	0.913	0.715	0.292	2e-32
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.926	0.731	0.291	2e-32
F4KHA8	370	WAT1-related protein At5g	no	no	0.51	0.413	0.420	1e-30
O80638	374	WAT1-related protein At2g	no	no	0.873	0.700	0.292	2e-30
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.92	0.766	0.319	7e-30
F4I5D5	375	WAT1-related protein At1g	no	no	0.936	0.749	0.269	8e-27

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  213 bits (543), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 193/351 (54%), Gaps = 66/351 (18%)

Query: 6   VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPP 65
           VTA +V +EC  VG +TL KAA  KG S  V IVYS   AA+ +LLPS F  +R+RT PP
Sbjct: 13  VTA-LVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAAL-LLLPSLFCSFRSRTLPP 70

Query: 66  LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF 125
           +  SI+ KI  LG+I CC     Y GI YSSPTL+SAI +LTPAFTF+LA++ R     F
Sbjct: 71  MNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSF 130

Query: 126 VQGASTS--------------------------------------------GSFFLS--- 138
            + +S +                                            G+ FL+   
Sbjct: 131 KRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNPNWILGAGFLAVEY 190

Query: 139 ----LLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDTELIA 193
               L YIVQT I+REYP E        + V+  + +V L  E N   +W++KP+  L++
Sbjct: 191 FCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIALVS 250

Query: 194 IGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGAT 253
           I CS  F   + +  HTWA   KGP++V+M+KPL I  A+ MGV  L D+LY+GS++GAT
Sbjct: 251 IVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLIGAT 310

Query: 254 IVAFGFYSVIWGQSEEEKMIDDK-----------DIDSLKSSSPKAPLLQT 293
           ++  GFY+V+WG+++E  +++D            D+DS  S S KAPLL++
Sbjct: 311 VITIGFYTVMWGKAKEVALVEDDNKANHEEANEADLDS-PSGSQKAPLLES 360

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 176/324 (54%), Gaps = 44/324 (13%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           MV  E   VG +TL KAA +KG S FV++VYS  F ++ +LLP TF  +R+R+ PPLT S
Sbjct: 17  MVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSL-LLLPLTFFSFRSRSLPPLTFS 75

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGA 129
           I+C +  LGLI+   Q   Y GI YSSPTLSSA+ ++ PAFTFILA++ R  +    + +
Sbjct: 76  ILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLGKKS 135

Query: 130 STS--------------------------------GSFFLSLLYI-------VQTSIIRE 150
           S +                                G   L+L YI       V    +  
Sbjct: 136 SVAKVLGTILSIIGALVVTLYHGPMLMSSHSDWIIGGGLLALQYILVSVSYLVMAHTMGR 195

Query: 151 YPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGCSAFFAVALRSLAH 209
           YP  ++ T +  V + +    V+L+AE+ NP +W ++ D  LI +  +         + H
Sbjct: 196 YPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSGYYVI-H 254

Query: 210 TWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE 269
           TWA   KGPVY+SM+KPL I+ A +     LG++LYLGSV+G  +++ GFY V+WG+++E
Sbjct: 255 TWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGGILISIGFYMVLWGKAKE 314

Query: 270 EKMIDDKDIDSLKSSSPKAPLLQT 293
           +K+     I+S  S S  APLL  
Sbjct: 315 DKVDIIGAIES--SPSHNAPLLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  179 bits (453), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/315 (38%), Positives = 168/315 (53%), Gaps = 48/315 (15%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A+EC  VGSS L KAA  +G S +V + Y+    A  +LL  + I+ R+R+ P    S
Sbjct: 21  MIAIECTTVGSSILYKAATLRGFSFYVFVFYAYV-GATLVLLLLSLIFGRSRSLPTAKSS 79

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGA 129
           +  KIF L L+    +     GI YSSPTLSSAI +LTPAFTFILA+  R         A
Sbjct: 80  LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query: 130 ----------STSGSFFL-----------------------------------SLLYIVQ 144
                     S SG+  +                                   S+ +I+Q
Sbjct: 140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSFESSWIIGGLLLGLQFLLLSVWFILQ 199

Query: 145 TSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVAL 204
           T I+  YPEE+   F   +  T+ S  V L+ E++ NSW+LKP   L ++  S  F  +L
Sbjct: 200 THIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIYSGLFDTSL 259

Query: 205 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW 264
            S+ HTW  H KGPVY+S++KPL I  A+ M    LGDTL+LGSV+G+ I++FGFY+VIW
Sbjct: 260 GSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILSFGFYTVIW 319

Query: 265 GQSEEE--KMIDDKD 277
           G++ E+  K + D +
Sbjct: 320 GKAREDSTKTVSDSE 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  155 bits (392), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 168/351 (47%), Gaps = 74/351 (21%)

Query: 8   AVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNR----TR 63
           A M AVEC  VGS+TL KAA  +G S +V + YS   + + +LLP + I+ R+R     +
Sbjct: 22  AAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTL-LLLPLSVIFGRSRRLPAAK 80

Query: 64  PPL------------------------------------------TVSIICKIFGLGLIS 81
            PL                                          T+++I ++  + L S
Sbjct: 81  SPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRLRS 140

Query: 82  CCVQTCL----------YVGIGYSSPTL--SSAIVDLTPAFTFILALISRGIDCDFVQGA 129
              Q  +           V + Y  P +  S++   + P  T    L S  I+  ++ G 
Sbjct: 141 SATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTS--IESSWIIGG 198

Query: 130 S--TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 187
               S  F +S+ YI+QT ++  YPEE+   F   +F T+ S  V L AE N  SW LKP
Sbjct: 199 LLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKP 258

Query: 188 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 247
           D  L AI  S  F     +L HTW  H KGPVY+S+++PL I  A+ MG   LGD L+LG
Sbjct: 259 DISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLG 318

Query: 248 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 296
           SV+G+ I+  GFY+VIWG++ E         D++K+   S ++PLL T  I
Sbjct: 319 SVIGSMILCIGFYTVIWGKARE---------DTIKTVAGSEQSPLLLTHII 360

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200 PE=2 SV=1

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 150/335 (44%), Gaps = 61/335 (18%)

Query: 19  GSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYY-RNRTRPPLTVSIICKIFGL 77
           G   +++ A+N G S  V  VY N  A   +LL   F Y+   + RPPLT+S++ + F L
Sbjct: 48  GFHIVSRVALNIGVSKVVYPVYRNLLA---LLLIGPFAYFFEKKERPPLTISLLAQFFFL 104

Query: 78  GLISCCVQTCLYV-GIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQ--------- 127
            LI        Y+ G+ Y++PT +SA+ +  PA TFI+A   R    D V+         
Sbjct: 105 ALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIMACALRLEHIDLVRKHGVAKVLG 164

Query: 128 --------------------------------GASTSGSFFLSLLY------------IV 143
                                           G+  S S  L  LY            ++
Sbjct: 165 TLVSIGGATVITLYRGFPIFDQGLNMQKEEVVGSDNSHSLTLGWLYLMGHCLSWAGWMVL 224

Query: 144 QTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVA 203
           Q  ++++YP +L  T   C F  IQ  V+AL  E + N+W +    EL  I  +   A  
Sbjct: 225 QAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIASG 284

Query: 204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI 263
           L     TW  +K GPV+V++++PL  +    M   +LGD LY G +VGA  +  G Y V+
Sbjct: 285 LVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYLVL 344

Query: 264 WGQSEEEKMI---DDKDIDSLKSSSPKAPLLQTKS 295
           WG++EE K+      +D +SL     +A   ++ S
Sbjct: 345 WGKNEERKLALEESQQDPESLTKHLLEAQHKKSNS 379

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 157/336 (46%), Gaps = 58/336 (17%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           MV ++    G   L+KA +NKG S++VL+VY +A A I ++ P  F Y+  + RP +T+ 
Sbjct: 19  MVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATI-VMAPFAF-YFDKKVRPKMTLM 76

Query: 70  IICKIFGLGLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALI----------- 117
           I  KI  LGL+   + Q   Y+G+ Y++ T ++A+ ++ PA TF+LA I           
Sbjct: 77  IFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCI 136

Query: 118 -------------------------------SRGIDCDFVQGAS-----------TSGSF 135
                                          ++G+      G             T G F
Sbjct: 137 RSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAVLVTIGCF 196

Query: 136 FLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAI 194
             +   I+Q   +R YP EL  T   C+  TI+ T VAL+ E+ NP++W +  DT+L+  
Sbjct: 197 SYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTA 256

Query: 195 GCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATI 254
             S     AL           +GPV+V+ + PL ++   IM   +  + +YLG V+GA +
Sbjct: 257 TYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYLGRVLGAVV 316

Query: 255 VAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPL 290
           +  G Y VIWG+ ++ K      +D  +S+ PK  L
Sbjct: 317 ICAGLYLVIWGKGKDYKYNSTLQLDD-ESAQPKLEL 351

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 11/164 (6%)

Query: 135 FFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAI 194
             +S+ YI+QT ++  YPEE+   F+  +  T+ S  V L AE++ NS+ LKP   L ++
Sbjct: 207 LLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSLASV 266

Query: 195 GCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATI 254
             S     +  S+ HTW  H KGPVY+S++KPL IV A+ MGV  LGD LYLGSV+G+ I
Sbjct: 267 MYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVIGSLI 326

Query: 255 VAFGFYSVIWGQSEEEKMIDDKDIDSLKS--SSPKAPLLQTKSI 296
           ++ GFY+VIWG++ E         DS+K+   + ++PLL + +I
Sbjct: 327 LSLGFYTVIWGKARE---------DSIKTVAGTEQSPLLPSHTI 361

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 70/332 (21%)

Query: 19  GSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT-RPPLTVSIICKIFGL 77
           G S + K A+N+G S  VL  Y +  A IFI   + F Y+ +R  RP +T+SI  KI  L
Sbjct: 21  GLSIIAKFALNQGMSPHVLASYRHIVATIFI---APFAYFLDRKIRPKMTLSIFFKILLL 77

Query: 78  GLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR----------------- 119
           GL+   + Q   Y G+ Y+S T ++A+ ++ PAF FI+A I R                 
Sbjct: 78  GLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHSQAKILG 137

Query: 120 ------------------------------------GIDCDFVQGASTSG------SFFL 137
                                               G+  D  +GAS         + F+
Sbjct: 138 TIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASLIAIGCICWAGFI 197

Query: 138 SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGC 196
           +L    Q   ++ YP EL  T   C   +I+ST+VAL  ER NP++W +  D++L+A   
Sbjct: 198 NL----QAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLDSKLLAAVY 253

Query: 197 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA 256
                  +           +GPV+V+ + PL +V   I+G  +L + ++LG ++GA ++ 
Sbjct: 254 GGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLGRILGAIVIV 313

Query: 257 FGFYSVIWGQSEEEKMIDDKDID-SLKSSSPK 287
            G YSV+WG+S++E      D+D  L  S+P+
Sbjct: 314 LGLYSVLWGKSKDEPSSSFSDMDKELPLSTPQ 345

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  131 bits (329), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 170/344 (49%), Gaps = 68/344 (19%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+ VE   VG STL K A +KG + +  + YS   A++ +L  S F   R+ + PPL+VS
Sbjct: 21  MLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLP-SLFFTNRSSSLPPLSVS 79

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTF----------------- 112
           I+ KI  LG +        Y+GI YSSPTL+SAI ++TPA TF                 
Sbjct: 80  ILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKERS 139

Query: 113 --------ILALISRGI------------------------------DCDFVQGAS--TS 132
                   IL+LI   +                              + D++ G +  T 
Sbjct: 140 SLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLTM 199

Query: 133 GSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDTEL 191
              F+S+ +I+Q  I+  YP     +F+  V V+I ++ + L+ E+N P+ W +  D  L
Sbjct: 200 QGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDITL 259

Query: 192 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 251
           I I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L D+LYLG ++G
Sbjct: 260 ITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 318

Query: 252 ATIVAFGFYSVIWGQSEEEKMIDDKDIDSLK-SSSPKAPLLQTK 294
             ++  GFY+V+WG++ EEK       D L  S   K PLL  +
Sbjct: 319 GILITLGFYAVMWGKANEEK-------DQLSFSEKEKTPLLLNR 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  121 bits (303), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 72/353 (20%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN-RTRPPL-T 67
           M  +E   +  + + K A+  G S FV +VY+NAF +I +LLP +F+++RN RT   + +
Sbjct: 16  MAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSI-LLLPFSFLFHRNERTEQSIFS 74

Query: 68  VSIICKIFGLGLISCCV-QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFV 126
             ++ ++F LG     + Q   +VG+ +SSP +  A+    P+F+F+L++I      D+ 
Sbjct: 75  WPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIILGRSKLDWR 134

Query: 127 QGA----------STSGSFFLSLL---YIVQTS------IIREYPEELMAT------FIC 161
             +          S SG+F   L    +I   S       ++  P+ L+        F+ 
Sbjct: 135 NTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLVYYNLPDNWFLG 194

Query: 162 CVFV-----------------------------------TIQSTVVALIAERNPNSWRLK 186
           C+F+                                   TIQ  + +L  ER+ ++W+++
Sbjct: 195 CIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMERDLSAWKIQ 254

Query: 187 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 246
           P+ +L  I  +  F   +R+  H      KGP YV ++KP GI +A + G +   ++L+ 
Sbjct: 255 PNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTSFFVNSLHY 314

Query: 247 GSVVGATIVAFGFYSVIWGQ--SEEEKMIDDKDIDSLKS------SSPKAPLL 291
           GSV+GA I   G+++V WGQ    EEK   +++  S+K+         K PLL
Sbjct: 315 GSVLGAAIAGVGYFTVSWGQLKESEEKQSSNEERKSIKTIHHRDEDEYKVPLL 367

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
359473431	348	PREDICTED: auxin-induced protein 5NG4-li	0.973	0.839	0.505	1e-89
255581154	354	Auxin-induced protein 5NG4, putative [Ri	0.98	0.830	0.501	1e-89
296086520	350	unnamed protein product [Vitis vinifera]	0.98	0.84	0.477	1e-87
255581150	348	Auxin-induced protein 5NG4, putative [Ri	0.97	0.836	0.511	2e-86
225424734	341	PREDICTED: auxin-induced protein 5NG4-li	0.95	0.835	0.477	2e-85
225424732	351	PREDICTED: auxin-induced protein 5NG4 [V	0.98	0.837	0.455	1e-81
296086528	317	unnamed protein product [Vitis vinifera]	0.866	0.820	0.496	2e-77
372477640	347	auxin-induced nodulin [Copaifera officin	0.983	0.850	0.456	8e-76
356502006	349	PREDICTED: auxin-induced protein 5NG4-li	0.963	0.828	0.457	4e-73
388507862	346	unknown [Lotus japonicus]	0.946	0.820	0.445	9e-70

>gi|359473431|ref|XP_002265468.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/348 (50%), Positives = 226/348 (64%), Gaps = 56/348 (16%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MWS  + A+M+ +ECLEVG STL+KAAM +G SDFV +VYSNA + + ILL    +++R 
Sbjct: 1   MWSSDLMALMLIIECLEVGLSTLSKAAMRRGMSDFVFVVYSNALS-VPILLFCCLLFHRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRG 120
           R  PPLT+SI+C+IF LG ISC  Q  L+VGI YSSPTL+SA+ DL PAFTFILA+ISR 
Sbjct: 60  RFPPPLTLSILCRIFILGFISCSTQMFLFVGIRYSSPTLASAMTDLVPAFTFILAIISRM 119

Query: 121 IDCDFVQGASTS----------------------------------------------GS 134
              D   G+  +                                              G 
Sbjct: 120 EKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIGG 179

Query: 135 FFLS-------LLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 187
           F L+       L Y+VQTSIIR+YP ELM TFIC +FVT+QS++V+LIAER+P++WRLKP
Sbjct: 180 FLLAISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLKP 239

Query: 188 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 247
           D ELIA+G SA   +A R  AH W  HKKGPV+V+M+KP+ IV A++MGVT LGD L+LG
Sbjct: 240 DVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHLG 299

Query: 248 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 295
           SV+GA I+AFGFY+V+WG+++EE  I+D     + SSS K PLLQ KS
Sbjct: 300 SVIGAAIIAFGFYTVMWGKAKEE--IEDMTTSGIDSSSHKDPLLQNKS 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581154|ref|XP_002531390.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528983|gb|EEF30974.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 231/349 (66%), Gaps = 55/349 (15%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MW  GVTAVM+ +E LEVG +T+ KAAM+KG S ++L+VYSN  A I +LL S+ I+YR 
Sbjct: 4   MWGSGVTAVMLTLEFLEVGMNTVTKAAMSKGMSHYILVVYSNMIA-ISLLLSSSLIFYRK 62

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRG 120
           R  P +T+SIIC+IF L L+SC  Q   Y+GIGYSSPTL+SA++DLTPAFTFIL + SR 
Sbjct: 63  RIAPAITLSIICRIFVLSLLSCAGQVFTYIGIGYSSPTLASAMIDLTPAFTFILGVFSRM 122

Query: 121 IDCDF-----------------------------VQGASTSG------------------ 133
              D                              + G S+SG                  
Sbjct: 123 ERLDLRIKSGQAKSIGTMVLIIGGLVFTLYKGLPITGISSSGDELHKEMLFLSPSNWAIG 182

Query: 134 -------SFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 186
                  S  L+L++++QT IIR+YP  L+     C FVTI S  V+L+AE++PN+WR+K
Sbjct: 183 GFFLAAHSIILALIFVIQTWIIRDYPSVLITNLFTCTFVTILSASVSLVAEKDPNAWRIK 242

Query: 187 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 246
           PD +LI+IG +A FAV+LRS+ HTWACHKKGPVY SM+KP+G+V A+ MGV+ LGDTLYL
Sbjct: 243 PDIQLISIGFTAVFAVSLRSVVHTWACHKKGPVYTSMFKPIGMVIAVFMGVSFLGDTLYL 302

Query: 247 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 295
           GSV+GA I+AFGFY+V+WG+++EE  ++DK+  S + SSPKAPLLQ KS
Sbjct: 303 GSVIGAVIIAFGFYAVMWGKTQEENTVEDKEDCSFEPSSPKAPLLQNKS 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086520|emb|CBI32109.3| unnamed protein product [Vitis vinifera]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 166/348 (47%), Positives = 225/348 (64%), Gaps = 54/348 (15%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MWS  +  VM+ +E LE+G +T++KAAM++G S+FV +VYSN FA  F+LL S  +++R 
Sbjct: 1   MWSFKLMLVMLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLL-SCLLFHRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRG 120
           +T PPLT SI+C+IF LGLISC +Q  +YVGI YSSPTL+SA+ DL PAFTFILA+I+R 
Sbjct: 60  KTPPPLTTSILCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRM 119

Query: 121 IDCDF---------------VQGA------------------------------------ 129
            + D                + GA                                    
Sbjct: 120 ENLDLRVRSSRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGG 179

Query: 130 --STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 187
             S   +F L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+P
Sbjct: 180 ILSAIAAFMLAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRP 239

Query: 188 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 247
           D ELIAI  SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYLG
Sbjct: 240 DIELIAIVYSAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLG 299

Query: 248 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 295
           SVVGA I+A GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 300 SVVGAAIIAIGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581150|ref|XP_002531388.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528981|gb|EEF30972.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 177/346 (51%), Positives = 225/346 (65%), Gaps = 55/346 (15%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           MW  GVTA MVA E  EVG +T+ KAAM++G S FV  VYSNAFA + IL+PS+FI+YR 
Sbjct: 1   MWGTGVTAAMVATEFTEVGINTMMKAAMSRGMSQFVYTVYSNAFA-LLILIPSSFIFYRR 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRG 120
           R RP LTVSII + F LGL+SCCVQ  +  G+ YSSPTLS+A++DLTPAFTF+LA+ISR 
Sbjct: 60  RPRPQLTVSIIFRTFLLGLLSCCVQMFMNTGVKYSSPTLSAAMIDLTPAFTFLLAIISRM 119

Query: 121 IDCDF---------------VQGA------------------------------------ 129
              D+               V GA                                    
Sbjct: 120 EKLDYKSQSTQAKSIGTIVSVAGALIVTLYKGQPITTLPSESNSLNQPLLLLSSTWVTGG 179

Query: 130 --STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKP 187
              T+G+  L+LLYIVQT I+++ P EL+ T I C FVT+ S++VAL+AE++ +SW LKP
Sbjct: 180 IFCTAGALCLALLYIVQTWILKDCPAELIITCIACFFVTVLSSIVALVAEKDISSWILKP 239

Query: 188 DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG 247
           D ELIA  CSA FAV++RS+ H WAC KKGP+Y SM+KPLGI+ A  +G   LGDTLY G
Sbjct: 240 DIELIATFCSAVFAVSIRSVVHAWACRKKGPLYASMFKPLGIIIATFLGFYFLGDTLYDG 299

Query: 248 SVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSS-SPKAPLLQ 292
           SV+G  I+A GFYSV+WG+++EEKM  D+   S +SS SPKAPLL+
Sbjct: 300 SVIGGIIIALGFYSVLWGKAQEEKMGKDERNSSFESSASPKAPLLR 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424734|ref|XP_002266639.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/339 (47%), Positives = 220/339 (64%), Gaps = 54/339 (15%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+ +E LE+G +T++KAAM++G S+FV +VYSN FA  F+LL S  +++R +T PPLT S
Sbjct: 1   MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLL-SCLLFHRRKTPPPLTTS 59

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF---- 125
           I+C+IF LGLISC +Q  +YVGI YSSPTL+SA+ DL PAFTFILA+I+R  + D     
Sbjct: 60  ILCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRS 119

Query: 126 -----------VQGA--------------------------------------STSGSFF 136
                      + GA                                      S   +F 
Sbjct: 120 SRAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFM 179

Query: 137 LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGC 196
           L++L++ QTSIIR YP ELM T ICC FV +QS++V+L+AERNP++WRL+PD ELIAI  
Sbjct: 180 LAVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVY 239

Query: 197 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVA 256
           SA   V LRS+A  W   +KGP + +M+KP+GI+ A++MGVT LGDTLYLGSVVGA I+A
Sbjct: 240 SAVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIA 299

Query: 257 FGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 295
            GFY+V+WG+ +EE +++D     ++SSS   PLLQ K+
Sbjct: 300 IGFYTVMWGKDKEETLLEDVPAHGMESSSHNVPLLQNKT 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424732|ref|XP_002266096.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086521|emb|CBI32110.3| unnamed protein product [Vitis vinifera]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 159/349 (45%), Positives = 226/349 (64%), Gaps = 55/349 (15%)

Query: 1   MWSVGVTAV-MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYR 59
           MWS  +TAV ++ +ECL+VG  TL+KAAM +G SD+V +VYSNA A + +L   + +++R
Sbjct: 1   MWSSELTAVILLTIECLDVGLITLSKAAMRRGMSDYVFVVYSNALA-VPVLFLCSLLFHR 59

Query: 60  NRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR 119
            R+ PPLT SI+C+IF LGL+SC +Q   ++GIGYSSPTL+SA+ +L PAFT++LA+++R
Sbjct: 60  RRSPPPLTPSILCRIFLLGLVSCSLQMLKFIGIGYSSPTLASAMTNLIPAFTYVLAIVTR 119

Query: 120 GIDCDF-----------------------------VQGASTSGS---------------- 134
               D                              ++ AST+ S                
Sbjct: 120 MEKLDLKVKSSRAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIG 179

Query: 135 --------FFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK 186
                   F +++L + QTSIIR+YP EL+ T I  +F T+QS++V+LIAER+P++WRL+
Sbjct: 180 GFLTAAAAFMVAVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLR 239

Query: 187 PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYL 246
            D ELIA+G S  F VALR   + W  H+KGPV+V+M+KP GIV A+IMGVT LGD L+L
Sbjct: 240 LDMELIAVGYSGIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHL 299

Query: 247 GSVVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKS 295
           GSV+GA I+A GFY+V+WG+++EEKM +D     + +SS + PLLQ KS
Sbjct: 300 GSVIGAAIIALGFYTVVWGKAKEEKMAEDIAACGVNTSSHRVPLLQNKS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086528|emb|CBI32117.3| unnamed protein product [Vitis vinifera]

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 157/316 (49%), Positives = 201/316 (63%), Gaps = 56/316 (17%)

Query: 33  SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGI 92
           SDFV +VYSNA + + ILL    +++R R  PPLT+SI+C+IF LG ISC  Q  L+VGI
Sbjct: 2   SDFVFVVYSNALS-VPILLFCCLLFHRRRFPPPLTLSILCRIFILGFISCSTQMFLFVGI 60

Query: 93  GYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGASTS-------------------- 132
            YSSPTL+SA+ DL PAFTFILA+ISR    D   G+  +                    
Sbjct: 61  RYSSPTLASAMTDLVPAFTFILAIISRMEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKG 120

Query: 133 --------------------------GSFFLS-------LLYIVQTSIIREYPEELMATF 159
                                     G F L+       L Y+VQTSIIR+YP ELM TF
Sbjct: 121 PQIAFASSTFKILDENLRSQISNWVIGGFLLAISAVSIALFYVVQTSIIRDYPAELMLTF 180

Query: 160 ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV 219
           IC +FVT+QS++V+LIAER+P++WRLKPD ELIA+G SA   +A R  AH W  HKKGPV
Sbjct: 181 ICHIFVTMQSSIVSLIAERDPSAWRLKPDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPV 240

Query: 220 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDID 279
           +V+M+KP+ IV A++MGVT LGD L+LGSV+GA I+AFGFY+V+WG+++EE  I+D    
Sbjct: 241 FVAMFKPVAIVIAVVMGVTFLGDVLHLGSVIGAAIIAFGFYTVMWGKAKEE--IEDMTTS 298

Query: 280 SLKSSSPKAPLLQTKS 295
            + SSS K PLLQ KS
Sbjct: 299 GIDSSSHKDPLLQNKS 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|372477640|gb|AEX97055.1| auxin-induced nodulin [Copaifera officinalis]

 Score =  290 bits (741), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 158/346 (45%), Positives = 219/346 (63%), Gaps = 51/346 (14%)

Query: 1   MWSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRN 60
           M  VGVT+VMVAV+  EVG +T+ K+A   G S+FV +VYSN F A+ IL+PS+ +Y+R 
Sbjct: 1   MQGVGVTSVMVAVQFAEVGVNTMIKSANTNGMSNFVYVVYSN-FLALCILVPSSLLYHRK 59

Query: 61  RTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR- 119
           +  PPLTVSI+C++F +G  +   QT +Y GIGYSSPTLS + VDL PAFTF++A++SR 
Sbjct: 60  KAAPPLTVSIVCRMFLVGFFASSAQTLMYTGIGYSSPTLSCSQVDLIPAFTFLIAVVSRM 119

Query: 120 --------GIDCDFV---------------QGASTSGSFFL------------------- 137
                   G     V               +G   +G++ L                   
Sbjct: 120 ENLNPKLKGSQAKMVGTVVSITGALIVTLYKGLPLTGAYQLHETLRSPKSNWLLGGLLLA 179

Query: 138 ------SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTEL 191
                 S + ++QT II+EYP EL+ T I C F  I ST++A+IAE+NP +W L  D EL
Sbjct: 180 VASLGNSFVLVIQTWIIKEYPTELVVTTISCGFAVIVSTIIAVIAEKNPKAWSLHLDMEL 239

Query: 192 IAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVG 251
           +AI   A F V++RS+  TWAC KKGP+YV+M+ PLG+V A+ MG   LGD LYLGS++G
Sbjct: 240 LAIIFCAIFVVSIRSVVQTWACRKKGPLYVAMFNPLGMVIAVGMGFIFLGDALYLGSIIG 299

Query: 252 ATIVAFGFYSVIWGQSEEEKMIDDKD-IDSLKSSSPKAPLLQTKSI 296
           A ++A GFY+V+WG+++EEKM+D+K+ + SL SSS   PLLQ K+I
Sbjct: 300 AGVIAVGFYAVLWGKAQEEKMLDEKNGMGSLHSSSSSTPLLQNKNI 345

Source: Copaifera officinalis

Species: Copaifera officinalis

Genus: Copaifera

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502006|ref|XP_003519813.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/345 (45%), Positives = 209/345 (60%), Gaps = 56/345 (16%)

Query: 4   VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
           V V+A MVA   LEVG +TL KAA   G S+FV IVYSN F A+F L+PSTF+Y+R R  
Sbjct: 6   VSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSN-FLALFFLIPSTFLYHRKRAP 64

Query: 64  PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR---- 119
           PP+  SI+ +IF L  +S  VQT  Y GI YSSPTL+SA+ DL PAFTFI A+ISR    
Sbjct: 65  PPIPSSILWRIFLLCCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMENL 124

Query: 120 -------------------------------------------------GIDCDFVQGA- 129
                                                             +  D++ G  
Sbjct: 125 NLKLRSSHAKIIGTVISIAGALIITLYKGMPLTGSSMRNLVLGGSEAYLSVQLDWIIGGF 184

Query: 130 -STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPD 188
              + S  LS+L+IVQT II++YPEEL+ T ICC  V I ST+VAL AE NP +W LK +
Sbjct: 185 LLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAWILKSN 244

Query: 189 TELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGS 248
            ELIA+  SA F V++RS+ +TWA  KKGPVYV+M+ PLG+V AI MGV  LG++LYLGS
Sbjct: 245 KELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESLYLGS 304

Query: 249 VVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQT 293
           ++GA  +  GFY+V+W Q+++EK++++K+ +    +S  APLL T
Sbjct: 305 MIGAATIGIGFYAVMWAQAQDEKLVNEKNENHDFVTSSSAPLLST 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507862|gb|AFK41997.1| unknown [Lotus japonicus]

 Score =  269 bits (688), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 155/348 (44%), Positives = 203/348 (58%), Gaps = 64/348 (18%)

Query: 4   VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR 63
           V VT  MVA + LEVG +TL K+A + G S++V IVYSN  A  F LLP+T +++R    
Sbjct: 6   VTVTTAMVATQLLEVGLNTLVKSATDSGLSNYVFIVYSNLLALCF-LLPATILHHRKSAP 64

Query: 64  PPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR---- 119
           PP+  SI+ +IF L  +S  VQT LY GIGYSSPTL+SA++DL PAFTF LA+ISR    
Sbjct: 65  PPIPSSILRRIFLLSCLSTAVQTLLYNGIGYSSPTLASAMIDLVPAFTFTLAVISRMENL 124

Query: 120 ----------------------------------GIDCDFVQGASTS----------GSF 135
                                             G   + V G S +          G F
Sbjct: 125 NLKLHSSQAKIVGTLVSIAGALILTLYQGMPIIRGSMQNLVLGGSGTYLSVQSNWILGGF 184

Query: 136 FL-------SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPD 188
            L       S+LYIVQT I+REYPEEL+ T +CC  V + S +V LIAE    +W L+PD
Sbjct: 185 LLATACFIVSVLYIVQTWIMREYPEELVVTTVCCSMVVVLSAIVGLIAEGTSRAWILRPD 244

Query: 189 TELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGS 248
            EL+A+  SA F V +RS+ + WA  KKGP+YV+M+ PLG+V A+++GV  LGD LYLGS
Sbjct: 245 KELVAVCYSAIFVVTMRSVVYAWAFRKKGPIYVAMFSPLGMVIAVVLGVLFLGDILYLGS 304

Query: 249 VVGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLLQTKSI 296
           ++GA I+A GFY VIW Q++EE        +   SSS  APL+ +K I
Sbjct: 305 LIGAVIIAIGFYGVIWAQAQEE--------NDFASSSSSAPLIYSKGI 344

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.513	0.419	0.394	4.8e-58
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.376	0.333	0.517	1.8e-48
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.476	0.405	0.333	9.7e-46
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.476	0.399	0.333	4.1e-43
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.423	0.315	0.312	3.9e-36
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.493	0.395	0.317	5.2e-35
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.42	0.328	0.349	1.6e-34
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.43	0.376	0.341	2.7e-34
TAIR|locus:2176065	359	UMAMIT21 "AT5G64700" [Arabidop	0.43	0.359	0.325	4.2e-34
TAIR|locus:2173189	377	UMAMIT15 "Usually multiple aci	0.466	0.371	0.313	1.5e-32

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
 Identities = 62/157 (39%), Positives = 100/157 (63%)

Query:   114 LALISRGIDCDFVQGAS-TSGSFF-LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTV 171
             ++L S+  + +++ GA   +  +F + L YIVQT I+REYP E        + V+  + +
Sbjct:   168 VSLRSQSTNPNWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTAL 227

Query:   172 VALIAERNP-NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIV 230
             V L  E N   +W++KP+  L++I CS  F   + +  HTWA   KGP++V+M+KPL I 
Sbjct:   228 VTLFTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIA 287

Query:   231 FAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS 267
              A+ MGV  L D+LY+GS++GAT++  GFY+V+WG++
Sbjct:   288 IAVAMGVIFLRDSLYIGSLIGATVITIGFYTVMWGKA 324

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
 Identities = 59/114 (51%), Positives = 78/114 (68%)

Query:     6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPP 65
             +   MV  E   VG +TL KAA +KG S FV++VYS  F ++ +LLP TF  +R+R+ PP
Sbjct:    13 ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSL-LLLPLTFFSFRSRSLPP 71

Query:    66 LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISR 119
             LT SI+C +  LGLI+   Q   Y GI YSSPTLSSA+ ++ PAFTFILA++ R
Sbjct:    72 LTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFR 125

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 49/147 (33%), Positives = 90/147 (61%)

Query:   124 DFVQGAS--TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-P 180
             D++ G +  T    F+S+ +I+Q  I+  YP     +F+  V V+I ++++ L+ E+N P
Sbjct:   186 DWLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNP 245

Query:   181 NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLL 240
             + W ++ D  LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++M    L
Sbjct:   246 SVWIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFL 304

Query:   241 GDTLYLGSVVGATIVAFGFYSVIWGQS 267
              D+LYLG ++G  ++  GFY+V+WG++
Sbjct:   305 NDSLYLGCLIGGLLITLGFYAVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 49/147 (33%), Positives = 91/147 (61%)

Query:   124 DFVQGAS--TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-P 180
             D++ G +  T    F+S+ +I+QT I+REYPE    + +  + ++I ++++ L+ E+N P
Sbjct:   186 DWLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNP 245

Query:   181 NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLL 240
             + W +  D  L  I  +     ++  + H+WA   K P+Y++++KPL I+ A++MG   L
Sbjct:   246 SIWIIHFDITLFTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFL 304

Query:   241 GDTLYLGSVVGATIVAFGFYSVIWGQS 267
              D+LYLG ++G  ++  GFY V+WG++
Sbjct:   305 NDSLYLGCLIGGILITLGFYVVMWGKA 331

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
 Identities = 40/128 (31%), Positives = 73/128 (57%)

Query:   140 LYIVQTSIIREYPE-ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSA 198
             L+++Q  I++ Y + +L  T + C   T+Q+  V  + E NP++WR+  D  L+A   S 
Sbjct:   213 LFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGWDMNLLAAAYSG 272

Query:   199 FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFG 258
               A ++          K+GPV+ + + PL +V   +MG  +L + ++LG V+GA ++  G
Sbjct:   273 IVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKIFLGGVIGAVLIVIG 332

Query:   259 FYSVIWGQ 266
              Y+V+WG+
Sbjct:   333 LYAVLWGK 340

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
 Identities = 48/151 (31%), Positives = 80/151 (52%)

Query:   120 GIDCDFVQGAS--TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAE 177
             G+  D  +GAS    G    +    +Q   ++ YP EL  T   C   +I+ST+VAL  E
Sbjct:   174 GVKQDLTKGASLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIE 233

Query:   178 R-NPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMG 236
             R NP++W +  D++L+A          +           +GPV+V+ + PL +V   I+G
Sbjct:   234 RGNPSAWAIHLDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILG 293

Query:   237 VTLLGDTLYLGSVVGATIVAFGFYSVIWGQS 267
               +L + ++LG ++GA ++  G YSV+WG+S
Sbjct:   294 SIILAEVMFLGRILGAIVIVLGLYSVLWGKS 324

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
 Identities = 44/126 (34%), Positives = 69/126 (54%)

Query:   142 IVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFA 201
             ++Q  ++++YP +L  T   C F  IQ  V+AL  E + N+W +    EL  I  +   A
Sbjct:   223 VLQAPVLKQYPAKLTLTSFTCFFGLIQFLVIALFVETDLNNWIIVSWEELFTILYAGIIA 282

Query:   202 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS 261
               L     TW  +K GPV+V++++PL  +    M   +LGD LY G +VGA  +  G Y 
Sbjct:   283 SGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVFIMLGLYL 342

Query:   262 VIWGQS 267
             V+WG++
Sbjct:   343 VLWGKN 348

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 44/129 (34%), Positives = 72/129 (55%)

Query:   139 LLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSA 198
             L  I+Q+ +++EYP +L    + C+F  IQS V A+   RNP+ W+++    L+++    
Sbjct:   191 LWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKIEFGLPLLSMAYCG 250

Query:   199 FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFG 258
                  L      WA  KKGPV+ ++Y PL ++   I+   L  +T YLGSV GA ++  G
Sbjct:   251 IMVTGLTYWLQVWAIEKKGPVFTALYTPLALILTCIVSSFLFKETFYLGSVGGAVLLVCG 310

Query:   259 FYSVIWGQS 267
              Y  +WG++
Sbjct:   311 LYLGLWGKT 319

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2176065 UMAMIT21 "AT5G64700" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
 Identities = 42/129 (32%), Positives = 77/129 (59%)

Query:   139 LLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSA 198
             L  ++Q  +++ YP +L  T + C+  +IQS V+A+  ER+ ++W+L  +  L+A+    
Sbjct:   202 LWLVLQGRVLKVYPSKLYFTTLHCLLSSIQSFVIAIALERDISAWKLGWNLRLVAVIYCG 261

Query:   199 FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFG 258
             F    +     +W   K+GPV++SM+ PL ++F ++    LL + + LGS+VG  ++  G
Sbjct:   262 FIVTGVAYYLQSWVIEKRGPVFLSMFTPLSLLFTLLSSAILLCEIISLGSIVGGLLLIIG 321

Query:   259 FYSVIWGQS 267
              Y V+WG+S
Sbjct:   322 LYCVLWGKS 330

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2173189 UMAMIT15 "Usually multiple acids move in and out Transporters 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
 Identities = 47/150 (31%), Positives = 83/150 (55%)

Query:   124 DFVQGAS--TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAER-NP 180
             D  +G+    +  F  S   I+Q  I+ +Y  EL  T + C+   +++TV+ LI ER N 
Sbjct:   181 DIARGSIMLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNM 240

Query:   181 NSWRLKPDTELIAIGCSAFFAVALRSLAHT---WACHKKGPVYVSMYKPLGIVFAIIMGV 237
             + W++ PD  L+A    + +   +  LA+    WA  ++GPV+VS + PL +V   I+  
Sbjct:   241 SVWKINPDVTLLA----SIYGGLVSGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILST 296

Query:   238 TLLGDTLYLGSVVGATIVAFGFYSVIWGQS 267
              +  + +Y+G V+G+ ++  G Y V+WG+S
Sbjct:   297 FVFLEKVYVGRVIGSVVIVIGIYLVLWGKS 326

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	300
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	1e-27
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	6e-21
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	6e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  109 bits (274), Expect = 1e-27
 Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 7/162 (4%)

Query: 131 TSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDT 189
           T    F+S+ +I+Q  I+ EYP     +F+  V V+I ++++ L+ E+N P+ W +  D 
Sbjct: 195 TIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI 254

Query: 190 ELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV 249
            LI I   A    ++  + H+W    KGP+Y++++KPL I+ A++MG   L D+LYLG +
Sbjct: 255 TLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCL 313

Query: 250 VGATIVAFGFYSVIWGQSEEEKMIDDKDIDSLKSSSPKAPLL 291
           +G  ++  GFY+V+WG++ EE     KD     S   K PLL
Sbjct: 314 IGGILITLGFYAVMWGKANEE-----KDQLLSFSGKEKTPLL 350

Length = 358

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score = 91.2 bits (226), Expect = 6e-21
 Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 1/123 (0%)

Query: 10  MVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVS 69
           M+A E   VG STL K A +KG + +  + YS   A++ +LLPS F   R+R+ PPL+VS
Sbjct: 18  MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASL-LLLPSLFFTNRSRSLPPLSVS 76

Query: 70  IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGA 129
           I+ KI  LG +        Y+GI YS+PTL+SAI ++TPA TFILA+I R     F + +
Sbjct: 77  ILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 130 STS 132
           S +
Sbjct: 137 SVA 139

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 48/274 (17%), Positives = 87/274 (31%), Gaps = 35/274 (12%)

Query: 23  LNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS- 81
           L+  A+          +++ A   +   L    +           +     +  L L+  
Sbjct: 21  LSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGL 80

Query: 82  CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILA------------------LISRGIDC 123
                 L++ + Y+S +++S I+ L P FT +LA                  L   G+  
Sbjct: 81  ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLL 140

Query: 124 DFVQGASTSGSFFLSLL-----------YIVQTSIIREYPEELMATFICCVFVTIQSTVV 172
             + G        L LL           Y      +       +A  +  +   +   + 
Sbjct: 141 ILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLF 200

Query: 173 ALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFA 232
            L     P   R       + +     F+  L  L   +A    G   V++   L  VFA
Sbjct: 201 FLSGFGAPILSR-----AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFA 255

Query: 233 IIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ 266
            ++GV LLG+ L    ++GA +V  G        
Sbjct: 256 ALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRA 289

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	300
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	99.98
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.98
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.94
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.93
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.92
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.86
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.82
COG2962	293	RarD Predicted permeases [General function predict	99.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.79
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.51
KOG2765	416	consensus Predicted membrane protein [Function unk	99.47
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.43
COG2510	140	Predicted membrane protein [Function unknown]	99.43
COG2510	140	Predicted membrane protein [Function unknown]	99.19
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.14
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.1
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.04
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.95
PRK15430	296	putative chloramphenical resistance permease RarD;	98.93
KOG1580	337	consensus UDP-galactose transporter related protei	98.91
KOG2766	336	consensus Predicted membrane protein [Function unk	98.87
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.85
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.81
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.77
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.77
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.73
KOG1581	327	consensus UDP-galactose transporter related protei	98.72
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.7
PLN00411	358	nodulin MtN21 family protein; Provisional	98.68
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.67
PRK11272	292	putative DMT superfamily transporter inner membran	98.58
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.55
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.53
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.5
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.38
PRK11689	295	aromatic amino acid exporter; Provisional	98.38
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.34
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.26
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.08
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.06
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.99
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.9
COG2962	293	RarD Predicted permeases [General function predict	97.88
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.86
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.83
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.76
PRK13499	345	rhamnose-proton symporter; Provisional	97.73
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.72
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.66
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.61
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.6
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.45
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.42
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.35
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.33
COG2076	106	EmrE Membrane transporters of cations and cationic	97.3
PRK11431	105	multidrug efflux system protein; Provisional	97.25
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.15
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.09
KOG1582	367	consensus UDP-galactose transporter related protei	97.07
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.91
PRK13499	345	rhamnose-proton symporter; Provisional	96.9
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.89
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.73
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.55
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.54
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.52
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.4
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.21
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.32
KOG2922	335	consensus Uncharacterized conserved protein [Funct	94.91
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.66
KOG2765	416	consensus Predicted membrane protein [Function unk	94.03
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	92.99
KOG1580	337	consensus UDP-galactose transporter related protei	90.85
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	89.91
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	86.75
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	86.67
PRK02237	109	hypothetical protein; Provisional	85.15
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	84.63
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	84.48
KOG4831	125	consensus Unnamed protein [Function unknown]	83.02
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	82.65
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	81.73
KOG1581	327	consensus UDP-galactose transporter related protei	80.65
KOG1443	349	consensus Predicted integral membrane protein [Fun	80.37
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	80.13

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=5.2e-37  Score=282.61  Aligned_cols=267  Identities=39%  Similarity=0.708  Sum_probs=225.3

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 022226            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (300)
Q Consensus         2 ~~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   81 (300)
                      +..|++.+|+.+.++.+...++.|.+++.|++|..+.++|+.+|+++ ++++.+.++|+++.++.+++++..+.+.|+++
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~-Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLL-LLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHH-HHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999999999999 99887765543332455688888999999998


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHH------hccC----------------------cc---------
Q 022226           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALIS------RGID----------------------CD---------  124 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~------l~e~----------------------~~---------  124 (300)
                      +.++.+++.|++|+++++++++.++.|+++.++++++      ++||                      ++         
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~  168 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP  168 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence            6677789999999999999999999999999999999      5888                      11         


Q ss_pred             ------------------ccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCC-CCcc
Q 022226          125 ------------------FVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PNSW  183 (300)
Q Consensus       125 ------------------~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~  183 (300)
                                        +.+|+  .+.++++|+.|.+.+|+..+++++....+++++.++++...+.+...+++ ...|
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~  248 (358)
T PLN00411        169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW  248 (358)
T ss_pred             ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence                              12376  88999999999999999988887756778888888888777777766542 2233


Q ss_pred             cccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          184 RLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       184 ~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      ..........++|.+++ +.++|.+|++++++.||++++++.+++|+++.++|++++||++++.+++|+++|+.|++++.
T Consensus       249 ~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        249 IIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             eeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            32222335568888875 67899999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccchhhh
Q 022226          264 WGQSEEE  270 (300)
Q Consensus       264 ~~~~~~~  270 (300)
                      ++++|+.
T Consensus       328 ~~~~~~~  334 (358)
T PLN00411        328 WGKANEE  334 (358)
T ss_pred             hhhhhhh
Confidence            7555443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=4.7e-31  Score=238.21  Aligned_cols=255  Identities=11%  Similarity=0.022  Sum_probs=207.3

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 022226            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISC   82 (300)
Q Consensus         3 ~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~   82 (300)
                      +.+++.++++++++|+.+++++|.+.++ +||.+++++|+.+++++ ++++.  ++++   .+.+++++......|.+..
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~-l~~~~--~~~~---~~~~~~~~~~~~~~g~~~~   82 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLI-LIAIF--KPWR---LRFAKEQRLPLLFYGVSLG   82 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHH-HHHHH--hHHh---ccCCHHHHHHHHHHHHHHH
Confidence            5688999999999999999999999987 99999999999999998 77654  2222   1234566677778888776


Q ss_pred             HHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC------------------------ccccchh--hhHHHHH
Q 022226           83 CVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID------------------------CDFVQGA--STSGSFF  136 (300)
Q Consensus        83 ~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~------------------------~~~~~G~--~l~a~~~  136 (300)
                      ..+.++++|++|++++.++++.++.|+++.+++.   +|+                        .....|+  .++++++
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~---~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~  159 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS---RRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGAC  159 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHH
Confidence            7778899999999999999999999999998873   222                        1123577  9999999


Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 022226          137 LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  216 (300)
Q Consensus       137 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~  216 (300)
                      |+.|.+..||..++++. ... .+...++++...+.....+++ ..+   +...|..++++++++++++|.+|+++++|.
T Consensus       160 ~a~~~v~~r~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~  233 (293)
T PRK10532        160 WAIYILSGQRAGAEHGP-ATV-AIGSLIAALIFVPIGALQAGE-ALW---HWSILPLGLAVAILSTALPYSLEMIALTRL  233 (293)
T ss_pred             HHHHHHHHHHHhccCCc-hHH-HHHHHHHHHHHHHHHHHccCc-ccC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999998877664 554 456677777777766543321 111   223466778999999999999999999999


Q ss_pred             CCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhcc
Q 022226          217 GPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  273 (300)
Q Consensus       217 ~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~~  273 (300)
                      +++++|++.++||+++.++|++++||+++..+++|+++|+.|+....++++|+.|.|
T Consensus       234 ~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~  290 (293)
T PRK10532        234 PTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIK  290 (293)
T ss_pred             ChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999999999999999999999999998877665544433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.98  E-value=1.8e-30  Score=234.22  Aligned_cols=250  Identities=16%  Similarity=0.146  Sum_probs=208.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHH
Q 022226            7 TAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQ   85 (300)
Q Consensus         7 ~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~   85 (300)
                      .+.++...++||.+++.+|.+.++ +||.+++++|+.+++++ ++++...+++  +  ..+++++......|.++ ..++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~-ll~~~~~~~~--~--~~~~~~~~~~~~~g~~~~~~~~   83 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGIL-LLAFLLLRGH--P--LPTLRQWLNAALIGLLLLAVGN   83 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHH-HHHHHHHhCC--C--CCcHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999886 99999999999999998 8887644322  2  22456777788889887 7788


Q ss_pred             HHHHHhc-cccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------c----cccchh--hhHHHHHH
Q 022226           86 TCLYVGI-GYSSPTLSSAIVDLTPAFTFILALISRGID---------------------C----DFVQGA--STSGSFFL  137 (300)
Q Consensus        86 ~~~~~al-~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~----~~~~G~--~l~a~~~~  137 (300)
                      .+++++. +++++++++++.++.|+++.+++.+ +|||                     +    ....|+  .++++++|
T Consensus        84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~  162 (292)
T PRK11272         84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW  162 (292)
T ss_pred             HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence            8999998 9999999999999999999999986 6998                     1    113577  99999999


Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 022226          138 SLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKG  217 (300)
Q Consensus       138 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~  217 (300)
                      +.|.+..||..++. + ...+.+++.++++.+.+.....+.+..  ..++...|..++++++++++++|.+|++++++.+
T Consensus       163 a~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~  238 (292)
T PRK11272        163 AFGSVWSSRLPLPV-G-MMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR  238 (292)
T ss_pred             HHHHHHHHhcCCCc-c-hHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999998876443 3 556778888888887777665433211  1123457889999999999999999999999999


Q ss_pred             CceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          218 PVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       218 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      +++++.+.+++|+++++++++++||+++..+++|+++++.|+++.+++++
T Consensus       239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998876443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.98  E-value=4.7e-30  Score=232.35  Aligned_cols=249  Identities=16%  Similarity=0.149  Sum_probs=196.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHH
Q 022226            7 TAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQ   85 (300)
Q Consensus         7 ~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~   85 (300)
                      .+..++++++||.+++++|.+.++ +||..++++|+.++++. ++++.  . ++    +.++   ......|++. ...+
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~-l~~~~--~-~~----~~~~---~~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFP-AIFFV--A-RP----KVPL---NLLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHH-HHHHh--c-CC----CCch---HHHHHHHHHHHHHHH
Confidence            466889999999999999999986 99999999999998877 66543  1 21    2223   2344456655 5566


Q ss_pred             HHHHHhccc-cChhhHhhhhhhhHHHHHHHHHHHhccC---------------------c--c----ccchh--hhHHHH
Q 022226           86 TCLYVGIGY-SSPTLSSAIVDLTPAFTFILALISRGID---------------------C--D----FVQGA--STSGSF  135 (300)
Q Consensus        86 ~~~~~al~~-~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~--~----~~~G~--~l~a~~  135 (300)
                      .+++.+++| .++++++++.++.|+++.+++++++|||                     +  +    ...|+  ++.+++
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal  153 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF  153 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence            677889988 5889999999999999999999999999                     1  1    12588  999999


Q ss_pred             HHHHHHHHHHHHHhhcCch--hHHHHHHHHHHHHHHHHHHHHhcCCC---CcccccCchhHHHHHHHHHHHHHHHHHHHH
Q 022226          136 FLSLLYIVQTSIIREYPEE--LMATFICCVFVTIQSTVVALIAERNP---NSWRLKPDTELIAIGCSAFFAVALRSLAHT  210 (300)
Q Consensus       136 ~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~  210 (300)
                      +|+.|.+..||..++.+++  .....+.+..+.+...+.+...+++.   ..+...+...|..++|+++++++++|.+|+
T Consensus       154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~  233 (299)
T PRK11453        154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWG  233 (299)
T ss_pred             HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999986655432  23445666666555554444444321   112223446799999999999999999999


Q ss_pred             HHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          211 WACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       211 ~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      +++++.++.+++.+.+++|+++.++|++++||+++..+++|+++++.|+++..+.++
T Consensus       234 ~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        234 TLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            999999999999999999999999999999999999999999999999998876554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=2.8e-29  Score=226.88  Aligned_cols=247  Identities=13%  Similarity=0.095  Sum_probs=191.6

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 022226            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (300)
Q Consensus         2 ~~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   81 (300)
                      +|.|+++.++.++++||.+++.+|.+.++ +||..+.++|+.+|+++ ++++.  .+++ . ++.+    ++....|.++
T Consensus         1 ~~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~-l~~~~--~~~~-~-~~~~----~~~~~~~~l~   70 (295)
T PRK11689          1 TSQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLL-LLLTV--GFPR-L-RQFP----KRYLLAGGLL   70 (295)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHH-HHHHc--cccc-c-cccc----HHHHHHHhHH
Confidence            46788999999999999999999999987 99999999999999998 77652  1111 1 1112    2233445555


Q ss_pred             -HHHHHHHHHhcc----ccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------cc-----------
Q 022226           82 -CCVQTCLYVGIG----YSSPTLSSAIVDLTPAFTFILALISRGID---------------------CD-----------  124 (300)
Q Consensus        82 -~~~~~~~~~al~----~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~~-----------  124 (300)
                       ..++.+++.|++    ++++++++++.++.|+++.+++++++|||                     ++           
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence             677777777765    46788999999999999999999999999                     11           


Q ss_pred             ---ccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHH
Q 022226          125 ---FVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAF  199 (300)
Q Consensus       125 ---~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i  199 (300)
                         ...|+  +++|+++|+.|.+..||..+++++ .....   ..+++.+.+.....+.+..+   .+...|..+++.+ 
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~~~~---~~~~~~l~~~~~~~~~~~~~---~~~~~~~~l~~~~-  222 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-ITLFF---ILTALALWIKYFLSPQPAMV---FSLPAIIKLLLAA-  222 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hhHHH---HHHHHHHHHHHHHhcCcccc---CCHHHHHHHHHHH-
Confidence               12377  999999999999999998777654 44322   23333333333332211111   2335687888888 


Q ss_pred             HHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          200 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       200 ~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      ++++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++...++
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            4799999999999999999999999999999999999999999999999999999999998887544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=1.1e-28  Score=223.18  Aligned_cols=260  Identities=11%  Similarity=0.055  Sum_probs=189.0

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-C-CCCHHHHHHHHHHHH
Q 022226            2 WSVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR-P-PLTVSIICKIFGLGL   79 (300)
Q Consensus         2 ~~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~-~-~~~~~~~~~~~~~gl   79 (300)
                      ++.|+++++++++++||.+++.+|.. ++ ++|.++.++|++++.++ ++++...+++.+.. . ..+++.+. ....+.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~-l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFF-MVVLMSICRQWSYLKTLIQTPQKIF-MLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHH-HHHHHHHHccHHHHHHHHcCHHHHH-HHHHHH
Confidence            35689999999999999999999986 54 99999999999999988 77765443211000 0 11333332 334666


Q ss_pred             HH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCcc---c---------------cch---h-hhHHHHH
Q 022226           80 IS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCD---F---------------VQG---A-STSGSFF  136 (300)
Q Consensus        80 ~g-~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~---~---------------~~G---~-~l~a~~~  136 (300)
                      ++ ..++.++++|++++++++++++.++.|+++.+++++++|||.+   +               ..|   . .++++++
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~l~aa~~  160 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS  160 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHH
Confidence            66 8899999999999999999999999999999999999999911   0               011   1 7789999


Q ss_pred             HHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 022226          137 LSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHK  215 (300)
Q Consensus       137 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~  215 (300)
                      |+.|.+..|+..++.. +....+.+.+.++.+...+..   +.....+...+...+..+.+.++ .+.++|.+|++++++
T Consensus       161 ~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~  236 (296)
T PRK15430        161 FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATR  236 (296)
T ss_pred             HHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhc
Confidence            9999998888653321 113334455555544322211   11111111111112333334454 788999999999999


Q ss_pred             cCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          216 KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       216 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      .|++++|++.+++|+++.++|++++||++++.+++|+++|+.|+.+........
T Consensus       237 ~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~  290 (296)
T PRK15430        237 LRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT  290 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998888776544333

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.96  E-value=9.9e-28  Score=212.44  Aligned_cols=230  Identities=14%  Similarity=0.141  Sum_probs=195.0

Q ss_pred             HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhcccc
Q 022226           17 EVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQTCLYVGIGYS   95 (300)
Q Consensus        17 w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~~al~~~   95 (300)
                      ||.+++..|.+++++.|+....+.|+..+.+. +.+....  +  +    +++++.+....|.++ .+++.+++.|++|+
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~-l~~~~~~--~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLL-LLPLLRR--R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHh--c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            89999999999887689999999999998887 7765422  2  1    234457788888888 89999999999999


Q ss_pred             ChhhHhhhhhhhHHHHHHHHHHHhccC-------------------------ccccchh--hhHHHHHHHHHHHHHHHHH
Q 022226           96 SPTLSSAIVDLTPAFTFILALISRGID-------------------------CDFVQGA--STSGSFFLSLLYIVQTSII  148 (300)
Q Consensus        96 ~~~~a~~i~~l~Pi~~~ila~~~l~e~-------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~~  148 (300)
                      ++++++++.++.|+++.+++.+++|||                         +....|+  +++++++|+.+.+..|+..
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999                         1223577  8999999999999999988


Q ss_pred             hhcCc-hhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhh
Q 022226          149 REYPE-ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPL  227 (300)
Q Consensus       149 ~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l  227 (300)
                      ++.+. ......+.+.++.+...+.....+++. ..   +...|..+++.++++++++|.+|++++++.++++++.+.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            77653 134555778888888888777544322 11   34568889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCcccchhhhhHHHHhhhh
Q 022226          228 GIVFAIIMGVTLLGDTLYLGSVVGATIVAFGF  259 (300)
Q Consensus       228 ~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv  259 (300)
                      +|+++.+++++++||+++..+++|+++++.|+
T Consensus       228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.94  E-value=1.3e-25  Score=203.48  Aligned_cols=242  Identities=12%  Similarity=0.092  Sum_probs=188.7

Q ss_pred             HHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccChhhH
Q 022226           21 STLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLS  100 (300)
Q Consensus        21 ~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a  100 (300)
                      .+..|.++++-.+|..++++|+.++.+. +.+......++ + ++.+++++..+...|+++..++.+.+.|++|++++++
T Consensus        18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~   94 (302)
T TIGR00817        18 NIYNKKLLNVFPYPYFKTLISLAVGSLY-CLLSWSSGLPK-R-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT   94 (302)
T ss_pred             HHHHHHHHhhCChhHHHHHHHHHHHHHH-HHHHHHhCCCC-C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            3578999886467999999999998877 65542111122 2 4567888899999999997888999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHhccC------------------------ccccchh--hhHHHHHHHHHHHHHHHHHh--hcC
Q 022226          101 SAIVDLTPAFTFILALISRGID------------------------CDFVQGA--STSGSFFLSLLYIVQTSIIR--EYP  152 (300)
Q Consensus       101 ~~i~~l~Pi~~~ila~~~l~e~------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~~~--~~~  152 (300)
                      +++.++.|+++.+++++++|||                        +....|+  +++|+++|++|.+..||..+  +++
T Consensus        95 ~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~  174 (302)
T TIGR00817        95 HTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD  174 (302)
T ss_pred             HHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence            9999999999999999999999                        1123588  99999999999999999877  666


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCCC---cccc----cC-chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecc
Q 022226          153 EELMATFICCVFVTIQSTVVALIAERNPN---SWRL----KP-DTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMY  224 (300)
Q Consensus       153 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~----~~-~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~  224 (300)
                      + ...+.+++..+++.+.|.....|+...   ++..    .. ...+...+..+..+....+.+++.++++.+|.+.+.+
T Consensus       175 ~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~  253 (302)
T TIGR00817       175 K-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG  253 (302)
T ss_pred             c-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH
Confidence            5 889999999999999998876654210   1100    00 0112112222222222223455689999999999999


Q ss_pred             hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          225 KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       225 ~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      .+++|++++++|++++||+++..+++|+++++.|++++++.|
T Consensus       254 ~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       254 NCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             hhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999988644

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.93  E-value=6.7e-24  Score=190.48  Aligned_cols=246  Identities=14%  Similarity=0.166  Sum_probs=180.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCCHHHHHHHHHHHHHH-HHH
Q 022226            7 TAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYY-RNRTRPPLTVSIICKIFGLGLIS-CCV   84 (300)
Q Consensus         7 ~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~gl~g-~~~   84 (300)
                      ..+.+.++++|+...+.+|...++ -++.  .++++..+++. +.|+...+. ++.+ +..+++. ......+.++ ..+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~-l~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVL-LTPYGLWYLAQVGW-SRLPATF-WLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHH-HHHHHHHhcccCCC-CCcchhh-HHHHHHHHHHHHHH
Confidence            467789999999999999976554 3443  47788777777 777765432 2222 2223333 4344444444 889


Q ss_pred             HHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------c----cccchh--hhHHHHHH
Q 022226           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID---------------------C----DFVQGA--STSGSFFL  137 (300)
Q Consensus        85 ~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~----~~~~G~--~l~a~~~~  137 (300)
                      +.+++.|+++.++++++.+.++.|+++.+++++++|||                     +    ....|+  +++++++|
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~  156 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGT  156 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999                     1    112355  88999999


Q ss_pred             HHHHHHHHHHHhhcCch---hHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 022226          138 SLLYIVQTSIIREYPEE---LMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  214 (300)
Q Consensus       138 a~~~v~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~  214 (300)
                      +.|.+..|+..++.++.   ...+.+.+..+++...+.....++..  +. .+...+..+++.+.+.+.++|.+|+++++
T Consensus       157 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~  233 (281)
T TIGR03340       157 AIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PYARQILPSATLGGLMIGGAYALVLWAMT  233 (281)
T ss_pred             HHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999888765444321   12233333333222222222112111  11 12234667788889999999999999999


Q ss_pred             hcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhh
Q 022226          215 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  261 (300)
Q Consensus       215 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l  261 (300)
                      +.|+++++.+.+++|+++.++|++++||+++..+++|+++++.|+++
T Consensus       234 ~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       234 RLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            99999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.92  E-value=2.3e-23  Score=184.42  Aligned_cols=228  Identities=10%  Similarity=-0.011  Sum_probs=164.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCHHH-HHHHHHHH
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNR----TRPPLTVSI-ICKIFGLG   78 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~----~~~~~~~~~-~~~~~~~g   78 (300)
                      .|+++.+++++++||.+++++|. .++ +||.+++++|+++++++ ++++...+++++    +.++.++++ +..+...|
T Consensus         1 ~~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         1 FKGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPF-MLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG   77 (256)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHH-HHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence            37899999999999999999998 455 99999999999999987 777654332211    101112222 34466677


Q ss_pred             HHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCccc------------------cch---h-hhHHHHH
Q 022226           79 LISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF------------------VQG---A-STSGSFF  136 (300)
Q Consensus        79 l~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~------------------~~G---~-~l~a~~~  136 (300)
                      .+...++.++++|++++++++++++.+++|+++++++++++|||.+.                  ..|   . ++.++++
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~~~~l~aa~~  157 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLPWEALVLAFS  157 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence            77788999999999999999999999999999999999999999110                  012   2 6889999


Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 022226          137 LSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKK  216 (300)
Q Consensus       137 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~  216 (300)
                      |+.|.+..|+..++ +. ....... +...+...+... .+++.......+...|..+++.|++ +.++|.+|++++++.
T Consensus       158 ~a~~~i~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~  232 (256)
T TIGR00688       158 FTAYGLIRKALKNT-DL-AGFCLET-LSLMPVAIYYLL-QTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRL  232 (256)
T ss_pred             HHHHHHHHhhcCCC-Cc-chHHHHH-HHHHHHHHHHHH-HhccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcC
Confidence            99999998887543 22 2222111 111112111111 1111110111122368888888876 889999999999999


Q ss_pred             CCceeecchhhHHHHHHHHHHHH
Q 022226          217 GPVYVSMYKPLGIVFAIIMGVTL  239 (300)
Q Consensus       217 ~~~~~s~~~~l~Pi~a~i~~~~~  239 (300)
                      |+++++++.|++|+++.+++.+.
T Consensus       233 ~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       233 PLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=1.1e-22  Score=187.80  Aligned_cols=244  Identities=14%  Similarity=0.092  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 022226           17 EVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPL--TVSIICKIFGLGLISCCVQTCLYVGIG   93 (300)
Q Consensus        17 w~~~~~~~K~~~~~~~~-p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~--~~~~~~~~~~~gl~g~~~~~~~~~al~   93 (300)
                      -.......|.++++ .| |..++.+|++++.++ ...+.....++ + ++.  .++.+..++..|+++...+...+.|++
T Consensus        61 s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~-~~~~~~~~~~~-~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~  136 (350)
T PTZ00343         61 NVLYVVDNKLALNM-LPLPWTISSLQLFVGWLF-ALLYWATGFRK-I-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMG  136 (350)
T ss_pred             HHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHH-HHHHHHhCCCC-C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34456778999987 99 999999999999876 55544322222 1 333  234667888899999444555679999


Q ss_pred             ccChhhHhhhhhhhHHHHHHHHHHHhccC------------------------ccccchh--hhHHHHHHHHHHHHHHHH
Q 022226           94 YSSPTLSSAIVDLTPAFTFILALISRGID------------------------CDFVQGA--STSGSFFLSLLYIVQTSI  147 (300)
Q Consensus        94 ~~~~~~a~~i~~l~Pi~~~ila~~~l~e~------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~  147 (300)
                      +++++.++++.++.|+++++++++++|||                        +....|+  +++|+++++.+.+..|+.
T Consensus       137 ~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~  216 (350)
T PTZ00343        137 LGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKT  216 (350)
T ss_pred             hccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999                        1123588  999999999999999998


Q ss_pred             HhhcC------chhHHHHHHHHHHHHHHHHHHHHhcCCC--Cccc----ccCchhHHHHHHHHHHHHHHHHHHHHH----
Q 022226          148 IREYP------EELMATFICCVFVTIQSTVVALIAERNP--NSWR----LKPDTELIAIGCSAFFAVALRSLAHTW----  211 (300)
Q Consensus       148 ~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~~i~~t~~~~~l~~~----  211 (300)
                      .++.+      ++.....++.+.+++.++|+....|...  ..+.    ......+..+++ .++.+++.|++|+.    
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~  295 (350)
T PTZ00343        217 MKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFY  295 (350)
T ss_pred             hcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            76542      1244666678899999998887665421  1110    001112334445 35678999999995    


Q ss_pred             HhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          212 ACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       212 a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      ++++.++...+...+++|++++++|++++||++++.+++|+++++.|++++++-
T Consensus       296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999998754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=1.1e-20  Score=169.06  Aligned_cols=251  Identities=19%  Similarity=0.195  Sum_probs=191.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-H
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-C   82 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~   82 (300)
                      .......++..+.|+.+....|...++..++....+.|+.++.+. +.+.....+...+  +.+. .+.+..+.+.++ .
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~   81 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALL-LLPLLLLEPRGLR--PALR-PWLLLLLLALLGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHH-HHHHHHhhccccc--cccc-chHHHHHHHHHHHH
Confidence            345677788889999999999999875467777777799998876 5544322111111  1111 135566666666 8


Q ss_pred             HHHHHHHHhccccChhhHhhhhhhhHHHHHHHHH-HHhccC---------------------cc------ccchh--hhH
Q 022226           83 CVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILAL-ISRGID---------------------CD------FVQGA--STS  132 (300)
Q Consensus        83 ~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~-~~l~e~---------------------~~------~~~G~--~l~  132 (300)
                      .++.+++.++++++++.++.+.++.|+++.++++ ++++||                     ++      ...|+  .+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~  161 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALA  161 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHH
Confidence            9999999999999999999999999999999997 666999                     11      13677  999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCchhHHHH-HHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 022226          133 GSFFLSLLYIVQTSIIREYPEELMATF-ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTW  211 (300)
Q Consensus       133 a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~  211 (300)
                      ++++++.+.+..|+.. +.+. ..... +...  ...............   .......|..+.+.+++++++++.+|++
T Consensus       162 a~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~  234 (292)
T COG0697         162 AALLWALYTALVKRLS-RLGP-VTLALLLQLL--LALLLLLLFFLSGFG---APILSRAWLLLLYLGVFSTGLAYLLWYY  234 (292)
T ss_pred             HHHHHHHHHHHHHHhc-CCCh-HHHHHHHHHH--HHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887 5443 45554 4443  222222222111111   1123356888999999999999999999


Q ss_pred             HhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          212 ACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       212 a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      ++++.+++.++++.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999988865

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.88  E-value=4.6e-21  Score=162.57  Aligned_cols=248  Identities=13%  Similarity=0.017  Sum_probs=204.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 022226            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (300)
Q Consensus         6 ~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~   85 (300)
                      ++.+++.+++.-=....+.|..... +.|...+.+|..+++++ ++++.  +..  + .+.+++++..+...|......|
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLI-ll~l~--RPw--r-~r~~~~~~~~~~~yGvsLg~MN   85 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALI-LLALF--RPW--R-RRLSKPQRLALLAYGVSLGGMN   85 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHH-HHHHh--hHH--H-hccChhhhHHHHHHHHHHHHHH
Confidence            5777877777777778889999888 99999999999999998 77764  222  1 3567777799999999888999


Q ss_pred             HHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------ccccchh--hhHHHHHHHHHHH
Q 022226           86 TCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID---------------------CDFVQGA--STSGSFFLSLLYI  142 (300)
Q Consensus        86 ~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~~~~~G~--~l~a~~~~a~~~v  142 (300)
                      .+||.++++++.+.+..+.++-|+.+.+++..-.++-                     +....|.  ++.++.||+.|++
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv  165 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSRRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIV  165 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhccchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999888765433332                     2224777  9999999999999


Q ss_pred             HHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceee
Q 022226          143 VQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVS  222 (300)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s  222 (300)
                      ..+|..+..+. -+.+...+.+++++.+|++....+.  .  ..++.-...-+.++++++.+.|.+-+.+++|.+....+
T Consensus       166 ~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~ag~--~--l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         166 LGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQAGP--A--LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             HcchhcccCCC-chHHHHHHHHHHHHHhhhhhhhcch--h--hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            99998866666 7888899999999999988743221  1  11233466777889999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          223 MYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       223 ~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      ..+.+||.++.+.|++++||.+|..|+.|.++|+.+..=.+..
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999999999999776644443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.86  E-value=4.4e-19  Score=160.95  Aligned_cols=256  Identities=15%  Similarity=0.172  Sum_probs=194.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 022226           12 AVECLEVGSSTLNKAAMNKGTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYV   90 (300)
Q Consensus        12 ~~~~~w~~~~~~~K~~~~~~~~-p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~   90 (300)
                      ..+++-..+.+.+....+.|.+ |..-.++-+..-.++ ..+....++++++..+.-++.+++.++.+++....+++...
T Consensus        20 ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~v-y~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~   98 (334)
T PF06027_consen   20 VLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALV-YTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVL   98 (334)
T ss_pred             HHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHH-HhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence            4556666667777666555554 555556666555555 55655444332111222235567788888888889999999


Q ss_pred             hccccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------------------ccccchh--hhHHHH
Q 022226           91 GIGYSSPTLSSAIVDLTPAFTFILALISRGID---------------------------------CDFVQGA--STSGSF  135 (300)
Q Consensus        91 al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------------------~~~~~G~--~l~a~~  135 (300)
                      |++||+.+.+.++..+.-+++++++++++|||                                 ++..+||  ++.+++
T Consensus        99 a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~  178 (334)
T PF06027_consen   99 AYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAI  178 (334)
T ss_pred             HhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHH
Confidence            99999999999999999999999999999999                                 2346899  999999


Q ss_pred             HHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 022226          136 FLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  214 (300)
Q Consensus       136 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~  214 (300)
                      .||++++..++..++.+. ....+...+++.++..+...+.|.+. ...+. + ...........++...-|.+....++
T Consensus       179 lya~~nV~~E~~v~~~~~-~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w-~-~~~~~~~v~~~~~lf~~y~l~p~~l~  255 (334)
T PF06027_consen  179 LYAVSNVLEEKLVKKAPR-VEFLGMLGLFGFIISGIQLAILERSGIESIHW-T-SQVIGLLVGYALCLFLFYSLVPIVLR  255 (334)
T ss_pred             HHHHHHHHHHHhcccCCH-HHHHHHHHHHHHHHHHHHHHheehhhhhccCC-C-hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988875 77888888899988888877777642 11111 1 12222222223355667778889999


Q ss_pred             hcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhh
Q 022226          215 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  271 (300)
Q Consensus       215 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~  271 (300)
                      ..+|+.+.+-..+..+++++++++++||++++..++|.++|+.|+.++...+++.++
T Consensus       256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            999999999999999999999999999999999999999999999999876655543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.82  E-value=5.9e-21  Score=162.99  Aligned_cols=249  Identities=15%  Similarity=0.105  Sum_probs=190.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~   84 (300)
                      ++..++.++ ..+..+.++.+..++  .+|.+..-.|+.+-.++ -.|..+..+.....|+..+   .++.++|..|+.+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mli-t~pcliy~~~~v~gp~g~R---~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLI-TYPCLIYYMQPVIGPEGKR---KWLILRGFMGFTG  110 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhh-hheEEEEEeeeeecCCCcE---EEEEeehhhhhhH
Confidence            344444455 666666666666654  58999999998877776 6665444332221134444   6788899999888


Q ss_pred             HHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC--------------------------------------cccc
Q 022226           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID--------------------------------------CDFV  126 (300)
Q Consensus        85 ~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~--------------------------------------~~~~  126 (300)
                      ..++|++++|.+.++|++|...+|.++.+++|.++||+                                      +...
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            88999999999999999999999999999999999999                                      1112


Q ss_pred             chh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCccccc-CchhHHHHHHHHHHHHH
Q 022226          127 QGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLK-PDTELIAIGCSAFFAVA  203 (300)
Q Consensus       127 ~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~i~~t~  203 (300)
                      .|.  ++.++++-|.-+++.|++.++.+. ...+.+..+++.+...+....++    .|..+ ...+|+.++.+|++ ..
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr~l~~~lGvf-gf  264 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDRWLFVNLGVF-GF  264 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----ceecCccccceEEEEEehhh-hh
Confidence            344  777777777777888999888876 55566666777776666555443    23322 23456666777874 57


Q ss_pred             HHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      +++.+...++++-.++.+++..+.+-+++.+|.++++||.|++++++|+++|+.+.+.+..+|
T Consensus       265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999999999988776543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.80  E-value=2.6e-17  Score=143.22  Aligned_cols=261  Identities=8%  Similarity=0.010  Sum_probs=205.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--CCCHHHHHHHHHHHHH
Q 022226            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP--PLTVSIICKIFGLGLI   80 (300)
Q Consensus         3 ~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~--~~~~~~~~~~~~~gl~   80 (300)
                      ..|+++.-+.+.++||..+...|.. ++ +++.++...|...+..+ ++.+....++.+...  ..+++.+..+.+.++.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~-~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPF-MLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            3589999999999999999999976 55 99999999999999887 666554443321111  2234455556666666


Q ss_pred             HHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC------------------ccccchh----hhHHHHHHH
Q 022226           81 SCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID------------------CDFVQGA----STSGSFFLS  138 (300)
Q Consensus        81 g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~------------------~~~~~G~----~l~a~~~~a  138 (300)
                      -..+...|.+|..+-..-+++.=.+..|++..+++.+++|||                  +.+..|.    .+.=+++|+
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~sf~  161 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALALSFG  161 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999                  2333444    888889999


Q ss_pred             HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 022226          139 LLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGP  218 (300)
Q Consensus       139 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~  218 (300)
                      .|....|+.  +.++ .+-.+..++.-.+..+.+.+..++.+....-.+...+..+...|+ .|.++..+|..+-++++-
T Consensus       162 ~Ygl~RK~~--~v~a-~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpl  237 (293)
T COG2962         162 LYGLLRKKL--KVDA-LTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPL  237 (293)
T ss_pred             HHHHHHHhc--CCch-HHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCH
Confidence            999765553  3444 777777777777777777666655432111123344666666776 789999999999999999


Q ss_pred             ceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhh
Q 022226          219 VYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEE  270 (300)
Q Consensus       219 ~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~  270 (300)
                      +..+..+|++|..-.+++++++||+++..+.+.-++|-.|+.++....-+++
T Consensus       238 s~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~  289 (293)
T COG2962         238 STLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTA  289 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999887654443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.79  E-value=3e-17  Score=147.94  Aligned_cols=239  Identities=14%  Similarity=0.075  Sum_probs=180.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-HHHHHHHHHHHHHHHHH
Q 022226            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLT-VSIICKIFGLGLISCCV   84 (300)
Q Consensus         6 ~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~gl~g~~~   84 (300)
                      +++..++++++||.+++..|...  |.++.++.  |..++.++ +....... |+   ++.+ ++.+..-.+.|.+-..+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~-~~~~~~~~-~~---~~~~~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALI-LSIAIAIF-VL---PEFWALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHH-HHHHHHHH-hC---CcccccHHHHHHHHHHHHHHhh
Confidence            46788999999999999999875  58888775  78888877 65544432 22   2223 33333344444444788


Q ss_pred             HHHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhccC----------------------------c-------cc-cc
Q 022226           85 QTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRGID----------------------------C-------DF-VQ  127 (300)
Q Consensus        85 ~~~~~~al~~~~~~~a~~i~~-l~Pi~~~ila~~~l~e~----------------------------~-------~~-~~  127 (300)
                      +.+++.++++++.+.+-.+.+ +.|+++.+++.+++||+                            +       .. ..
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~  152 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKK  152 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhh
Confidence            999999999999999998888 88899999999999998                            1       11 46


Q ss_pred             hh--hhHHHHHHHHHHHHHHHHHhhcCchhHH---HHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHH
Q 022226          128 GA--STSGSFFLSLLYIVQTSIIREYPEELMA---TFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAV  202 (300)
Q Consensus       128 G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t  202 (300)
                      |.  .++++++|+.|.+..|+.  ++++ ...   ..+.++.++.+..+..  .+.+  .+  .+...+..++ .|++ +
T Consensus       153 Gi~~~l~sg~~y~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~--~~~~--~~--~~~~~~~~~~-~Gi~-~  221 (290)
T TIGR00776       153 GILLLLMSTIGYLVYVVVAKAF--GVDG-LSVLLPQAIGMVIGGIIFNLGH--ILAK--PL--KKYAILLNIL-PGLM-W  221 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc--CCCc-ceehhHHHHHHHHHHHHHHHHH--hccc--ch--HHHHHHHHHH-HHHH-H
Confidence            77  999999999999988875  3554 666   4444444544433322  1111  12  1223354555 7887 7


Q ss_pred             HHHHHHHHHHhh-hcCCceeecchhhHHHHHHHHHHHHhcCcccchhh----hhHHHHhhhhhhhhc
Q 022226          203 ALRSLAHTWACH-KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFYSVIW  264 (300)
Q Consensus       203 ~~~~~l~~~a~~-~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~----iG~~lil~Gv~l~~~  264 (300)
                      ++++.+|..+.+ +.+++.++++.+++|+.+.+++++++||+.+..++    +|+++++.|+.+...
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            999999999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.57  E-value=1.7e-12  Score=117.83  Aligned_cols=231  Identities=13%  Similarity=0.123  Sum_probs=176.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHH
Q 022226           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTF  112 (300)
Q Consensus        33 ~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~  112 (300)
                      .|..+++..+....+. -.+.....+++    +.++..+......+.+..+...+-+.+++|++.+.-.++-++.|+.++
T Consensus        31 ~~~~lt~~q~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm  105 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALF-SFILLSLFKFP----KSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM  105 (303)
T ss_pred             ccHHHHHHHHHHHHHH-HHHHHHhcccc----CCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence            4899999999998887 55544333311    122233466667777778888999999999999999999999999999


Q ss_pred             HHHHHHhccC----------------------------------ccccchh--hhHHHHHHHHHHHHHHHHHhhcCc-hh
Q 022226          113 ILALISRGID----------------------------------CDFVQGA--STSGSFFLSLLYIVQTSIIREYPE-EL  155 (300)
Q Consensus       113 ila~~~l~e~----------------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~-~~  155 (300)
                      +++.+++|+|                                  ..+..|+  .+++.++-+...+.++|..++++. +.
T Consensus       106 i~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~  185 (303)
T PF08449_consen  106 ILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPW  185 (303)
T ss_pred             HHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence            9999999999                                  0112388  888888999999999998776543 37


Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hcCCCC--cccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHH
Q 022226          156 MATFICCVFVTIQSTVVALI--AERNPN--SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVF  231 (300)
Q Consensus       156 ~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~  231 (300)
                      ..+++..+++.+...+....  .++...  ......+..+..++...+ ...++....+...++.++...+++..+.-+.
T Consensus       186 ~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~  264 (303)
T PF08449_consen  186 ELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFL  264 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHH
Confidence            78889999998888877776  222111  111122334445555544 5566777777899999999999999999999


Q ss_pred             HHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          232 AIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       232 a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      +++++++++||++++.+++|.++++.|+.+..+.++|+
T Consensus       265 sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  265 SILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999988655443

; GO: 0055085 transmembrane transport

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.51  E-value=5e-14  Score=110.13  Aligned_cols=125  Identities=20%  Similarity=0.308  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 022226          135 FFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  214 (300)
Q Consensus       135 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~  214 (300)
                      ++|+.+.+..|+..++.|+ ...+++.+..+++ ..+.....+...  ....+...+...++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISP-LSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCCH-HHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4688899999999888875 9999999999998 666666554432  22234456778888899889999999999999


Q ss_pred             hcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          215 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       215 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      +.++++++++.+++|+++.++++++++|+++..+++|+++++.|++++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998865

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.47  E-value=1.4e-12  Score=117.00  Aligned_cols=197  Identities=13%  Similarity=0.114  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC--------------------------------cc
Q 022226           77 LGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID--------------------------------CD  124 (300)
Q Consensus        77 ~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~--------------------------------~~  124 (300)
                      ...+-+..++.+..|+++++++..+++.++..+|+..++.++..||                                .+
T Consensus       165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~  244 (416)
T KOG2765|consen  165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR  244 (416)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence            3444488999999999999999999999999999999999999999                                12


Q ss_pred             ccchh--hhHHHHHHHHHHHHHHHHHhhcC---chhHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHHHHHHHH
Q 022226          125 FVQGA--STSGSFFLSLLYIVQTSIIREYP---EELMATFICCVFVTIQSTVVALIAERN-PNSWRLKPDTELIAIGCSA  198 (300)
Q Consensus       125 ~~~G~--~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~  198 (300)
                      ..+|+  ++++|+.|+.|.++.||...+.+   +...+.++.-++..++++|..++...- -..+..|+..+...++..+
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~  324 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNN  324 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhh
Confidence            25888  99999999999999888766553   112233455556666666655554331 1245555666677788888


Q ss_pred             HHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhcc
Q 022226          199 FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  273 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~~  273 (300)
                      +++|+++=++|.+|+-..++..+..-+.++...+++.+.++=+.++++..++|.+.|++|.+++++..+-.++++
T Consensus       325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~~~  399 (416)
T KOG2765|consen  325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKKDP  399 (416)
T ss_pred             HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999997655554443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.43  E-value=2.1e-12  Score=116.21  Aligned_cols=247  Identities=15%  Similarity=0.149  Sum_probs=185.8

Q ss_pred             HHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccChhh
Q 022226           22 TLNKAAMN--KGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTL   99 (300)
Q Consensus        22 ~~~K~~~~--~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~   99 (300)
                      ...|..++  +.-.|..++..++..+.+. .+....++.++.. +..++..+..++..|++.+++.++-..++.+.+.+.
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~-~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALA-LLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHH-HHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhH
Confidence            45688887  4467999999988888876 6655544333322 222344567888889998999999999999999999


Q ss_pred             HhhhhhhhHHHHHHHHHHHhccC------------------------ccccchh--hhHHHHHHHHHHHHHHHHHh----
Q 022226          100 SSAIVDLTPAFTFILALISRGID------------------------CDFVQGA--STSGSFFLSLLYIVQTSIIR----  149 (300)
Q Consensus       100 a~~i~~l~Pi~~~ila~~~l~e~------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~~~----  149 (300)
                      ...+-.++|+++.++++++.+|+                        +-...|.  ++++.++.+...+..+++.+    
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~  191 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGE  191 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            99999999999999999999999                        1224677  89999999999999888763    


Q ss_pred             hcCchhHHHHHHHHHHHHHHH-HHHHHhcCCCC-cccc-cCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchh
Q 022226          150 EYPEELMATFICCVFVTIQST-VVALIAERNPN-SWRL-KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKP  226 (300)
Q Consensus       150 ~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~~~~-~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~  226 (300)
                      +.++ .....++.-.+.+.++ |.....|++.. .+.. ++.......++.. +....-...-+..+.+.+|..-+..+.
T Consensus       192 ~~~~-~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~  269 (316)
T KOG1441|consen  192 SLNS-MNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGH  269 (316)
T ss_pred             ccCc-hHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhcc
Confidence            2444 8888888888888888 77776555332 0011 1111222333333 233333445557899999999999999


Q ss_pred             hHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhc
Q 022226          227 LGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKM  272 (300)
Q Consensus       227 l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~  272 (300)
                      +.-++.+..|+++++|+.++.+..|.++.+.|++++.+.|.+++++
T Consensus       270 ~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  270 MKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             ceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            9999999999999999999999999999999999999766665543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.43  E-value=3.6e-12  Score=97.75  Aligned_cols=132  Identities=19%  Similarity=0.161  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      ++++++.+++-.+..|---++.++ ...+....++..+.+..+....+... .....+...|..+...| ++++++..+|
T Consensus         8 ALLsA~fa~L~~iF~KIGl~~vdp-~~At~IRtiVi~~~l~~v~~~~g~~~-~~~~~~~k~~lflilSG-la~glswl~Y   84 (140)
T COG2510           8 ALLSALFAGLTPIFAKIGLEGVDP-DFATTIRTIVILIFLLIVLLVTGNWQ-AGGEIGPKSWLFLILSG-LAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhccccCc-cHHHHHHHHHHHHHHHHHHHhcCcee-cccccCcceehhhhHHH-HHHHHHHHHH
Confidence            788999999998887665566765 77888888888877777766554321 11112556788888888 5899999999


Q ss_pred             HHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          210 TWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      ++|++..+++++.++.-+.|+++.+++++++||++|..+++|++||..|+.++..
T Consensus        85 f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          85 FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999999999999987654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.19  E-value=2e-10  Score=88.26  Aligned_cols=123  Identities=8%  Similarity=0.003  Sum_probs=105.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCV   84 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~   84 (300)
                      +..++.++++++||...++.|..+++ +||...++.|.....++ ++.+.+..++.+.....+.|.|..+.+.|+.+...
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~-l~~v~~~~g~~~~~~~~~~k~~lflilSGla~gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIF-LLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHH-HHHHHHhcCceecccccCcceehhhhHHHHHHHHH
Confidence            34678899999999999999999986 99999999999998888 88777666654332235777888888899877899


Q ss_pred             HHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCcc--ccchh
Q 022226           85 QTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCD--FVQGA  129 (300)
Q Consensus        85 ~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~--~~~G~  129 (300)
                      ..+||.|++...++.++-+-.+.|.++.++++++++||.+  ..+|.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~  127 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGI  127 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999933  23566

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.14  E-value=1.9e-10  Score=89.71  Aligned_cols=107  Identities=21%  Similarity=0.217  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhcc
Q 022226           15 CLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQTCLYVGIG   93 (300)
Q Consensus        15 ~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~~al~   93 (300)
                      ++||...+..|...++ .||...+++|+.++++. +.... ..+++.. ...+.+++......|.++ ..++.+++.|++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGIL-LILLL-ILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHHH-HHHHH-hhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4799999999999987 99999999999999852 22322 2233222 355667778888889987 899999999999


Q ss_pred             ccChhhHhhhhhhhHHHHHHHHHHHhccCccc
Q 022226           94 YSSPTLSSAIVDLTPAFTFILALISRGIDCDF  125 (300)
Q Consensus        94 ~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~  125 (300)
                      +++++.++.+.++.|+++.++++++++|+.++
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~  108 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSW  108 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            99999999999999999999999999999543

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.10  E-value=5.2e-08  Score=86.51  Aligned_cols=265  Identities=10%  Similarity=0.075  Sum_probs=194.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIV--YSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~--~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   81 (300)
                      .++....+.-++.-..+-+..|.++.+.=-|..+..  .+.+...+. +...-..+.-+  .++++++..++..-..++-
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~-v~~lk~~~lv~--~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLV-VLVLKRLGLVN--FRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HHHHHHhceee--cCCcChHHHHHHccHHHHH
Confidence            355666677777777788889999877334444444  787777766 55443222222  2577888888888888887


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCcc------------------------ccchh--hhHHHH
Q 022226           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCD------------------------FVQGA--STSGSF  135 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~------------------------~~~G~--~l~a~~  135 (300)
                      .++...-..+++|.+...-+++-++.|+++++....++|.++.                        ...|-  ++...+
T Consensus        88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~  167 (314)
T KOG1444|consen   88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCL  167 (314)
T ss_pred             HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHH
Confidence            7777777889999999999999999999999999999997711                        11233  777788


Q ss_pred             HHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHHHhcCCC---Cccc-ccCchhHHHHHHHHHHHHHHHHHHHH
Q 022226          136 FLSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIAERNP---NSWR-LKPDTELIAIGCSAFFAVALRSLAHT  210 (300)
Q Consensus       136 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~~~~~~~~l~~~~i~~t~~~~~l~~  210 (300)
                      +-+.+.+..|+..+..+ ....++++..+.+.+......+++++..   .+.+ ......+.++...++++-++.|..+ 
T Consensus       168 ~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~-  246 (314)
T KOG1444|consen  168 TTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF-  246 (314)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH-
Confidence            88888877776543321 1267888999999888888887776511   1110 1123457788888888888887655 


Q ss_pred             HHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhc
Q 022226          211 WACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKM  272 (300)
Q Consensus       211 ~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~  272 (300)
                      +..+..+++..+++....-..+.+-+.++.|++.++...+|..+-+.|-.++++.+.++++.
T Consensus       247 ~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  247 LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            48899999999999988888888888888999999999999999998888888766555433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.04  E-value=3.6e-09  Score=94.93  Aligned_cols=130  Identities=15%  Similarity=0.097  Sum_probs=99.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .+.++++|+.+.+..|+..++.+.   ...+.+..+++...|........ ..|...+. .+......+.+.....+..+
T Consensus         6 ~~~aa~~~a~~~~~~k~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         6 VVFSALMHAGWNLMAKSHADKEPD---FLWWALLAHSVLLTPYGLWYLAQ-VGWSRLPA-TFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHhhcCCchhH---HHHHHHHHHHHHHHHHHHHhccc-CCCCCcch-hhHHHHHHHHHHHHHHHHHH
Confidence            578999999999999977666432   34555666666666665532111 23433222 33334444555778889999


Q ss_pred             HHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          210 TWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      ++++++.+++.++++.+..|+++.+++++++||+++..+++|.++++.|+.++..
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.95  E-value=1.8e-08  Score=89.00  Aligned_cols=116  Identities=17%  Similarity=0.161  Sum_probs=96.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTS--DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS   81 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~--p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   81 (300)
                      .++..+.++++++|+...+..|...++ .+  +.....+|+.+++++ +.+......++   +..+.+.+..+...|.++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALL-LLPFAWFLGPN---PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHH-HHHHHHhcCCC---CCcchHHHHHHHHHHHHH
Confidence            467889999999999999999999865 66  455666889999998 88876553332   233566667788889888


Q ss_pred             -HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCcc
Q 022226           82 -CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCD  124 (300)
Q Consensus        82 -~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~  124 (300)
                       ...+.++++++++.+++.++.+.++.|+++.++++++++|+.+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~  245 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLS  245 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence             8899999999999999999999999999999999999999943

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.93  E-value=8.9e-09  Score=93.15  Aligned_cols=134  Identities=12%  Similarity=0.126  Sum_probs=105.2

Q ss_pred             cchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCccc--ccCchhHHHHHHHHHHH
Q 022226          126 VQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR--LKPDTELIAIGCSAFFA  201 (300)
Q Consensus       126 ~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~i~~  201 (300)
                      ..|.  .++++++|+...+..|.. .+.++ .++.+++++++.+++.+......+.. ...  ..+...+ .....+.+.
T Consensus         7 ~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~-~~~~~~R~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~   82 (296)
T PRK15430          7 RQGVLLALAAYFIWGIAPAYFKLI-YYVPA-DEILTHRVIWSFFFMVVLMSICRQWS-YLKTLIQTPQKI-FMLAVSAVL   82 (296)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh-cCCCH-HHHHHHHHHHHHHHHHHHHHHHccHH-HHHHHHcCHHHH-HHHHHHHHH
Confidence            4677  889999999999888765 56765 89999999999887776654332111 100  0011222 233356667


Q ss_pred             HHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          202 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       202 t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      .++.+.++++++++.+++.++...++.|++..++++++++|+++..+++|.++.+.|+.++.
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            78889999999999999999999999999999999999999999999999999999998765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.91  E-value=4.5e-08  Score=83.08  Aligned_cols=181  Identities=14%  Similarity=0.070  Sum_probs=133.1

Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC-------------------------------ccccchh-
Q 022226           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID-------------------------------CDFVQGA-  129 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~-------------------------------~~~~~G~-  129 (300)
                      .+.++.-..|+|+.+=....+=-++-|+=+++++..+.+++                               ++...|. 
T Consensus        96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GEl  175 (337)
T KOG1580|consen   96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGEL  175 (337)
T ss_pred             HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHH
Confidence            67777888999999877777778899999999999888777                               1223455 


Q ss_pred             h-hHHHHHHHHHHHHHHHHHhhcCc-hhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCchhHHHHHHHHHHHHHHH
Q 022226          130 S-TSGSFFLSLLYIVQTSIIREYPE-ELMATFICCVFVTIQSTVVALIAERN--PNSWRLKPDTELIAIGCSAFFAVALR  205 (300)
Q Consensus       130 ~-l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~i~~t~~~  205 (300)
                      . +++--.=+.-...+.++++++.. ..+++.+..+.+++.+.....++++.  ...+....+..|.-+...++ ++.++
T Consensus       176 LL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LG  254 (337)
T KOG1580|consen  176 LLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLG  254 (337)
T ss_pred             HHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhh
Confidence            3 33322223334566777666542 26788888888887766555544331  01111113344666777776 77889


Q ss_pred             HHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          206 SLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       206 ~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      ++..+..+...||-.-|++....-.|+++.++++++.+++..|++|.++++.|+..=.
T Consensus       255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999999999999999999999999999999999999987533

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.87  E-value=2e-08  Score=86.15  Aligned_cols=216  Identities=9%  Similarity=0.044  Sum_probs=159.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHH
Q 022226           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTF  112 (300)
Q Consensus        33 ~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~  112 (300)
                      .|..-.|.-+.+-+++ -.|+..++++-   .+   ..|...++.+++..-.+++...|.||++-..+..+-.-....+.
T Consensus        47 ~Pt~QtFl~Y~LLalV-Y~~~~~fR~~~---~~---~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~  119 (336)
T KOG2766|consen   47 APTSQTFLNYVLLALV-YGPIMLFRRKY---IK---AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVL  119 (336)
T ss_pred             CccHHHHHHHHHHHHH-HhhHHHhhhHH---HH---HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHH
Confidence            4777888888888888 88887664321   12   22344566666665667777889999999999999888888899


Q ss_pred             HHHHHHhccC--------------------------------ccccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHH
Q 022226          113 ILALISRGID--------------------------------CDFVQGA--STSGSFFLSLLYIVQTSIIREYPEELMAT  158 (300)
Q Consensus       113 ila~~~l~e~--------------------------------~~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~  158 (300)
                      +++|+++|.|                                .+..+||  .++++-+|+..++...-+.++.+. ...+
T Consensus       120 ~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm  198 (336)
T KOG2766|consen  120 VLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELM  198 (336)
T ss_pred             HHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHH
Confidence            9999999988                                2345888  999999999999988888888876 8888


Q ss_pred             HHHHHHHHHHHHHHHHHhcC-CCCcccccCchhHHHHHHHH-HHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHH
Q 022226          159 FICCVFVTIQSTVVALIAER-NPNSWRLKPDTELIAIGCSA-FFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMG  236 (300)
Q Consensus       159 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~  236 (300)
                      ....++|++...+- .+.+. +....+  +  .|-...|+. ..+..+-|.+.-..+|..+++...+-....-.|+.+. 
T Consensus       199 ~~lgLfGaIIsaIQ-~i~~~~~~~tl~--w--~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i-  272 (336)
T KOG2766|consen  199 GFLGLFGAIISAIQ-FIFERHHVSTLH--W--DSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI-  272 (336)
T ss_pred             HHHHHHHHHHHHHH-HhhhccceeeEe--e--hHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH-
Confidence            88899999988887 43433 221111  1  122222332 2233344445557788889999988888888888888 


Q ss_pred             HHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          237 VTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       237 ~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                       ..+|-+.++...+.-+.+..|..++.
T Consensus       273 -~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  273 -RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             -HHHhcchhhhhHHHHHHHHHhhEEee
Confidence             56788899999999999999998873

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.87  E-value=2.2e-06  Score=77.34  Aligned_cols=257  Identities=12%  Similarity=0.102  Sum_probs=170.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCC------CHHHHHHH
Q 022226            7 TAVMVAVECLEVGSSTLNKAAMNKG---TSDFVLIVYSNAFAAIFILLPSTFIYYRN---RTRPPL------TVSIICKI   74 (300)
Q Consensus         7 ~~~l~~~~~~w~~~~~~~K~~~~~~---~~p~~~~~~R~~~a~l~~ll~~~~~~~~~---~~~~~~------~~~~~~~~   74 (300)
                      ++.++...+.++......|++-..+   ..|...++.-=.+-.++ ...+.+...|+   +....+      ++++..++
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~-c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~   95 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVF-CLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV   95 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHH-HHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence            5667788899999999999986554   56666666665655555 44444443211   111122      23456778


Q ss_pred             HHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC--------------------------------
Q 022226           75 FGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID--------------------------------  122 (300)
Q Consensus        75 ~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~--------------------------------  122 (300)
                      .+.+++.++.+-+.|.++.+.+++.-.+..++-.+.|+++..+++++|                                
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~  175 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSE  175 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCC
Confidence            888888877777999999999999999999999999999999999999                                


Q ss_pred             ---ccccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHH-HHHHHHHHHHHHHHHhcCCC-C---cccccCchhHH
Q 022226          123 ---CDFVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFI-CCVFVTIQSTVVALIAERNP-N---SWRLKPDTELI  192 (300)
Q Consensus       123 ---~~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~-~---~~~~~~~~~~~  192 (300)
                         ++...|.  .+.+++.-+...+...|+.++-+.+..+-=. ..++|.++.+...+..+... .   .+...+...|.
T Consensus       176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~  255 (345)
T KOG2234|consen  176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWL  255 (345)
T ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHH
Confidence               1224666  6666666666667667766553322222222 23334433333333322211 1   11111233455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          193 AIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       193 ~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      .++..++     +=.+-...+|+.|-..=.-...+..+++.+.++.++|-++|....+|..+|+.++.++...+.++
T Consensus       256 vVl~~a~-----gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  256 VVLLNAV-----GGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHhc-----cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            5544443     33344456666666665666668889999999999999999999999999999999999666555

>TIGR00688 rarD rarD protein

Probab=98.85  E-value=2.8e-08  Score=87.93  Aligned_cols=133  Identities=12%  Similarity=0.182  Sum_probs=103.2

Q ss_pred             hh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCC---CcccccCchh-HHHHHHHHHHH
Q 022226          128 GA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP---NSWRLKPDTE-LIAIGCSAFFA  201 (300)
Q Consensus       128 G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~~i~~  201 (300)
                      |.  .++++++|+...+..|.. .+.++ .++.++.++++++.+.+......+.-   ..+....... +..+...|++ 
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~-~~~~~-~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLL-KPLPA-TDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh-ccCCH-HHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            55  788999999999998874 46765 99999999999887766554432210   0111111122 3345555554 


Q ss_pred             HHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          202 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       202 t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      .++.+.++++++++.++..++...++.|+++.++++++++|+++..+++|..+.+.|+.++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999999999999988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.81  E-value=1e-08  Score=81.03  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=67.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHH--HhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          194 IGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVT--LLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       194 l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~--~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      .+++|+++++++|.+|++++++.|.+.+.++..+.++...+.++.  ++||++|+.+++|.++|+.|++++.++++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            457788999999999999999999999999999999888888885  89999999999999999999999875433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.77  E-value=4.2e-07  Score=79.83  Aligned_cols=184  Identities=14%  Similarity=0.162  Sum_probs=131.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC------------------------
Q 022226           67 TVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID------------------------  122 (300)
Q Consensus        67 ~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~------------------------  122 (300)
                      ++++..++.+.+++..+.+.+.+.++++.+++.-.++.++-.+++++++++++|+|                        
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            46677888899999989999999999999999999999999999999999999999                        


Q ss_pred             -c----------------cccchh--hhHHHHHHHHHHHHHHHHHhhcCchhH-HHHHHHHHHHHHHHHHHHHhcCCC--
Q 022226          123 -C----------------DFVQGA--STSGSFFLSLLYIVQTSIIREYPEELM-ATFICCVFVTIQSTVVALIAERNP--  180 (300)
Q Consensus       123 -~----------------~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~--  180 (300)
                       .                +...|.  .++++++-++..+...|+.|+.+.+.. -.....++|.++.++.....+.+.  
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence             0                113566  777778888888888887776543222 333334444444444433322211  


Q ss_pred             --CcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 022226          181 --NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIV  255 (300)
Q Consensus       181 --~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~li  255 (300)
                        ..++..+...|..++     .+.++=.+-...+|+.|...=..-..+..+.+.+.++.++|.+++....+|+.+|
T Consensus       173 ~~g~f~G~~~~~~~~i~-----~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIVIF-----LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHHHHH-----HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence              112221222333333     3344444566688888988888888899999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.77  E-value=1.1e-07  Score=77.06  Aligned_cols=134  Identities=13%  Similarity=0.193  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHhh------cCchhHHHHHHHHHHHHHHHHHHHHhcCCCC--ccc-cc------CchhHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIRE------YPEELMATFICCVFVTIQSTVVALIAERNPN--SWR-LK------PDTELIAI  194 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~-~~------~~~~~~~l  194 (300)
                      ++.|.++.+++.+..|+..++      ..++..+..+....+.+.+.+.....|++..  ... ..      ....+..+
T Consensus         5 ~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (153)
T PF03151_consen    5 ALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLL   84 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHH
Confidence            688999999999998886554      2235888999999999999999888877431  111 00      12335555


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          195 GCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       195 ~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +..++.. ..-....+..+++.+|...++...+..+..+++|++++||+++..+++|.++.+.|.+++++
T Consensus        85 ~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   85 ILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5566544 44455667799999999999999999999999999999999999999999999999987753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.73  E-value=4.3e-08  Score=75.78  Aligned_cols=108  Identities=12%  Similarity=0.194  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHH
Q 022226          160 ICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTL  239 (300)
Q Consensus       160 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~  239 (300)
                      +...++.+..........+....+.......+...+..|++....++.+|.+++++.+ ..++....+.|+++.+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            3444555555554444322111111112234556666677677789999999999999 488899999999999999999


Q ss_pred             hcCcccchhhhhHHHHhhhhhhhhccchh
Q 022226          240 LGDTLYLGSVVGATIVAFGFYSVIWGQSE  268 (300)
Q Consensus       240 l~E~~~~~~~iG~~lil~Gv~l~~~~~~~  268 (300)
                      ++|+++...++|.++++.|+.++.+.+.+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999999876544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.72  E-value=8.9e-07  Score=78.05  Aligned_cols=229  Identities=14%  Similarity=0.137  Sum_probs=157.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHH
Q 022226           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTF  112 (300)
Q Consensus        33 ~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~  112 (300)
                      ++..+++.+-+.+.++ -...  ++.++..  ....+.+......+........+-|.|++|.+=..-.+--++=-+=++
T Consensus        50 ~~~fL~~~q~l~~~~~-s~~~--l~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLV-SYAM--LKWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             ccHHHHHHHHHHHHHH-HHHH--Hhccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            6888888888888876 4332  2223211  122333466677777777888888999999976666666666666778


Q ss_pred             HHHHHHhccC---------------------------------ccccchh-hhHHHHHHHHHH-HHHHHHHhhcC-chhH
Q 022226          113 ILALISRGID---------------------------------CDFVQGA-STSGSFFLSLLY-IVQTSIIREYP-EELM  156 (300)
Q Consensus       113 ila~~~l~e~---------------------------------~~~~~G~-~l~a~~~~a~~~-v~~~~~~~~~~-~~~~  156 (300)
                      +++.++.++|                                 ++...|. .+..-+.+=.++ ..++++-+++. ....
T Consensus       125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~  204 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLH  204 (327)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhH
Confidence            8888888888                                 1223555 444444433333 45666655422 2377


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC-C--cccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHH
Q 022226          157 ATFICCVFVTIQSTVVALIAERNP-N--SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAI  233 (300)
Q Consensus       157 ~~~~~~~~~~i~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~  233 (300)
                      ++++..+++++....... ..+.. .  ++...++..+.-++.... +..+++...++-+++-|+-....++.+-=++++
T Consensus       205 mM~~vNLf~~i~~~~~li-~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si  282 (327)
T KOG1581|consen  205 MMFGVNLFSAILNGTYLI-LQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSI  282 (327)
T ss_pred             HHHHHHHHHHHHHHHhhh-cCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHH
Confidence            888888888887766533 22211 1  122223445555666665 456778888889999999999999999999999


Q ss_pred             HHHHHHhcCcccchhhhhHHHHhhhhhhhhccchh
Q 022226          234 IMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  268 (300)
Q Consensus       234 i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~  268 (300)
                      +.+.+.+|++++..+++|..+++.|+++-..-++|
T Consensus       283 ~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  283 MLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999987654444

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.70  E-value=4e-07  Score=82.27  Aligned_cols=119  Identities=10%  Similarity=0.042  Sum_probs=93.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~   83 (300)
                      .+.++.+.++++|+...+..|...++ .+|...... ..++++. +.+.......  . ...+...+......|+++ .+
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~-~~~~~~~-l~~~~~~~~~--~-~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAE-HGPATVAIG-SLIAALI-FVPIGALQAG--E-ALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHH-HHHHHHH-HHHHHHHccC--c-ccCCHHHHHHHHHHHHHHHHH
Confidence            36778999999999999999998765 788777544 4566666 7776544322  1 233555555567889998 88


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCccc--cchh
Q 022226           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF--VQGA  129 (300)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~--~~G~  129 (300)
                      .+.+|++++++.+++.++.+.++.|+++.++++++++|+.+.  ..|.
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~  269 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLAL  269 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence            999999999999999999999999999999999999999443  4666

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.68  E-value=2.4e-07  Score=85.89  Aligned_cols=133  Identities=11%  Similarity=0.091  Sum_probs=105.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      ++..-++|+.+.++.|...++--++....++.+.++++++.++++..+++. .+...+...|..+..+|+++ .+.+.++
T Consensus        18 ~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~~~~~~~~~~l~l~g~~g-~~~~~~~   95 (358)
T PLN00411         18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLPPLSVSILSKIGLLGFLG-SMYVITG   95 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchHHHHHHHHHHHHHH-HHHHHHH
Confidence            667778888888888876655333488999999999999988887654321 11111223466777778776 4566688


Q ss_pred             HHHhhhcCCceeecchhhHHHHHHHHHHHH------hcCcccchhhhhHHHHhhhhhhhhc
Q 022226          210 TWACHKKGPVYVSMYKPLGIVFAIIMGVTL------LGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~------l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +.++++.+++.++.+.++.|+++.++++++      ++|+++..+++|.++-+.|+.++..
T Consensus        96 ~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         96 YIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999      6999999999999999999988764

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.67  E-value=4.7e-06  Score=73.59  Aligned_cols=243  Identities=14%  Similarity=0.083  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCCCHHHH-HHHHHHHHHHHHHHHHHHHhccc
Q 022226           18 VGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRT--RPPLTVSII-CKIFGLGLISCCVQTCLYVGIGY   94 (300)
Q Consensus        18 ~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~--~~~~~~~~~-~~~~~~gl~g~~~~~~~~~al~~   94 (300)
                      +..+...+...+. --|+..+......-.++ -.......+++.+  ....+|+.. .++...|+..+.--.+-.++++|
T Consensus        30 ~Ltf~~~~~~~~f-~fPLf~ts~h~~v~flf-a~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~y  107 (349)
T KOG1443|consen   30 GLTFYFKWLTKNF-HFPLFVTSLHLAVKFLF-AALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEY  107 (349)
T ss_pred             HHHHHhhhhhcCc-CCchHHHHHHHHHHHHH-HHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeee
Confidence            3344455544443 45777777766554443 1111111112111  024566544 45556677667777788999999


Q ss_pred             cChhhHhhhhhhhHHHHHHHHHHHhccCcc------------------------ccchh------hhHHHHHHHHHHHHH
Q 022226           95 SSPTLSSAIVDLTPAFTFILALISRGIDCD------------------------FVQGA------STSGSFFLSLLYIVQ  144 (300)
Q Consensus        95 ~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~------------------------~~~G~------~l~a~~~~a~~~v~~  144 (300)
                      ++.+.-+..-+..++|+.+++.++.-||.+                        ...|.      .+.+++-|+.-..+.
T Consensus       108 VtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll  187 (349)
T KOG1443|consen  108 VTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLL  187 (349)
T ss_pred             eeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHH
Confidence            999999999999999999999999889821                        13455      444555566666555


Q ss_pred             HHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCC-----CcccccCc-hhHHHHHHHHHHHHHHHHHHH---HHHhhh
Q 022226          145 TSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-----NSWRLKPD-TELIAIGCSAFFAVALRSLAH---TWACHK  215 (300)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~-~~~~~l~~~~i~~t~~~~~l~---~~a~~~  215 (300)
                      ++.....+.|........-.-.+.++|..+..|+..     ..|...+. ..+..+.+.++ +...++.+-   +..+.+
T Consensus       188 ~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~  266 (349)
T KOG1443|consen  188 RNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSR  266 (349)
T ss_pred             hcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeee
Confidence            543322233466777766677777888888888743     12222222 12333433333 333444333   357788


Q ss_pred             cCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          216 KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       216 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      .+....|+..-..-+-..+++.++.+|.++...+.|..+...|+.+..
T Consensus       267 Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  267 TSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             ccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999999999999999998873

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.58  E-value=7.8e-07  Score=80.30  Aligned_cols=128  Identities=12%  Similarity=0.027  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .++..+.|+...+..|...++.++ ...+++.+.++++.++++....+..   .  .+...+.....+|++.....+.++
T Consensus        13 ~~~~~~iWg~~~~~~K~~~~~~~p-~~~~~~R~~~a~l~ll~~~~~~~~~---~--~~~~~~~~~~~~g~~~~~~~~~~~   86 (292)
T PRK11272         13 LFALYIIWGSTYLVIRIGVESWPP-LMMAGVRFLIAGILLLAFLLLRGHP---L--PTLRQWLNAALIGLLLLAVGNGMV   86 (292)
T ss_pred             HHHHHHHHhhHHHHHHHHhccCCH-HHHHHHHHHHHHHHHHHHHHHhCCC---C--CcHHHHHHHHHHHHHHHHHHHHHH
Confidence            566778899999998877777765 9999999999998887776543221   1  123456666677777666778888


Q ss_pred             HHHh-hhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          210 TWAC-HKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       210 ~~a~-~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +.+. ++.+++.++...++.|+++.+++++ ++|+++..+++|..+.+.|+++...
T Consensus        87 ~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         87 TVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence            8898 9999999999999999999999986 7999999999999999999988764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.55  E-value=9.5e-07  Score=80.01  Aligned_cols=123  Identities=15%  Similarity=0.118  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .+++++.|+...+..|...++.++ ....++.+.++++...+...   .+  ..      .+..+...++......+.++
T Consensus         9 ~l~~~~~Wg~~~~~~k~~~~~~~p-~~~~~~R~~~a~~~l~~~~~---~~--~~------~~~~~~~~g~~~~~~~~~~~   76 (299)
T PRK11453          9 ALLVVVVWGLNFVVIKVGLHNMPP-LMLAGLRFMLVAFPAIFFVA---RP--KV------PLNLLLGYGLTISFGQFAFL   76 (299)
T ss_pred             HHHHHHHHhhhHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHhc---CC--CC------chHHHHHHHHHHHHHHHHHH
Confidence            678899999999999887778875 99999999887765544321   11  00      12223333444444555566


Q ss_pred             HHHhhh-cCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          210 TWACHK-KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       210 ~~a~~~-~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +.++++ .+++.++.+.++.|+++.++++++++|+++..+++|.++.+.|+.+...
T Consensus        77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            778876 6888999999999999999999999999999999999999999988764

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.53  E-value=4.8e-07  Score=69.70  Aligned_cols=68  Identities=12%  Similarity=0.044  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          197 SAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       197 ~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      .+++..++++.+|..++++.+.+.+.+..++.++++.++|++++||+++..+++|.++++.|+.++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34467788999999999999999999999999999999999999999999999999999999987653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.50  E-value=1.6e-06  Score=78.66  Aligned_cols=120  Identities=10%  Similarity=0.083  Sum_probs=94.4

Q ss_pred             HHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 022226          140 LYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV  219 (300)
Q Consensus       140 ~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~  219 (300)
                      +++.+|...++.+.|...+.+++.++.+...+.......+...   .+..+|..++..|++. ...+.+.+.++++.+++
T Consensus        17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s   92 (302)
T TIGR00817        17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLK---ISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVS   92 (302)
T ss_pred             HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHH
Confidence            3456777777767779999999988877655541111111111   1344677788888874 77789999999999999


Q ss_pred             eeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          220 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       220 ~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      ..+++..+.|+++.++++++++|+++..++.|.++.+.|+.+..
T Consensus        93 ~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        93 FTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999998654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.39  E-value=3.9e-06  Score=77.74  Aligned_cols=124  Identities=8%  Similarity=-0.022  Sum_probs=94.0

Q ss_pred             HHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 022226          140 LYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV  219 (300)
Q Consensus       140 ~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~  219 (300)
                      +.+.+|...++.|-|..++.++++++.+...+....-..+...+. .....|..++.+|++..+. +...+.++++.+++
T Consensus        64 ~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~~~-~~~~~~sl~~~svs  141 (350)
T PTZ00343         64 YVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHLFV-HFGAVISMGLGAVS  141 (350)
T ss_pred             HHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHH
Confidence            345677777788745999999999998765544321111111111 0123466777788766544 66677999999999


Q ss_pred             eeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          220 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       220 ~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      .++++..++|++++++++++++|+++..++.|.++++.|+.+....
T Consensus       142 ~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~  187 (350)
T PTZ00343        142 FTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK  187 (350)
T ss_pred             HHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence            9999999999999999999999999999999999999999987643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.38  E-value=2.5e-05  Score=68.94  Aligned_cols=181  Identities=12%  Similarity=0.080  Sum_probs=125.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhccC------------------------
Q 022226           68 VSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRGID------------------------  122 (300)
Q Consensus        68 ~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~-l~Pi~~~ila~~~l~e~------------------------  122 (300)
                      .+.+..-++.|++-.++|...+.+.++.+.+.+--+.. .+=+.+.+++.++++|.                        
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            36777778888888999999999999999999887765 56667899999999998                        


Q ss_pred             ------c------cccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHH---HHHHHHHHHHHHHHHhcCCCCcccc
Q 022226          123 ------C------DFVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFI---CCVFVTIQSTVVALIAERNPNSWRL  185 (300)
Q Consensus       123 ------~------~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~  185 (300)
                            +      +...|.  .+++.+.|..|.+..|-  .+.++ .....=   .++.++++..   ...+...  .  
T Consensus       122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~-~~~~lPqaiGm~i~a~i~~---~~~~~~~--~--  191 (269)
T PF06800_consen  122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSG-WSAFLPQAIGMLIGAFIFN---LFSKKPF--F--  191 (269)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCCh-hHhHHHHHHHHHHHHHHHh---hcccccc--c--
Confidence                  0      112345  88888999999887654  23333 444333   3333332222   2222211  1  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccch----hhhhHHHHhhhhhh
Q 022226          186 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLG----SVVGATIVAFGFYS  261 (300)
Q Consensus       186 ~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~----~~iG~~lil~Gv~l  261 (300)
                       ....|..++ .|+ .=.++-..+..+.++.|.+..-.+.-+..+++.+.|.++++|+=+..    ..+|.++++.|..+
T Consensus       192 -~k~~~~nil-~G~-~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  192 -EKKSWKNIL-TGL-IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             -ccchHHhhH-HHH-HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence             112233332 222 33456677888999999999999999999999999999999988765    45688888877653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.38  E-value=5.4e-06  Score=74.95  Aligned_cols=126  Identities=10%  Similarity=0.009  Sum_probs=92.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      ++.+++.|+...+..|...++.++ ....++.+..+++++.++..   .+  ...   ...+..++. +.+.....+.++
T Consensus         9 ~l~a~~~Wg~~~~~~k~~~~~~~P-~~~~~~R~~~a~l~l~~~~~---~~--~~~---~~~~~~~~~-~~l~~~~~~~~~   78 (295)
T PRK11689          9 GLIAILLWSTMVGLIRGVSESLGP-VGGAAMIYSVSGLLLLLTVG---FP--RLR---QFPKRYLLA-GGLLFVSYEICL   78 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCh-HHHHHHHHHHHHHHHHHHcc---cc--ccc---cccHHHHHH-HhHHHHHHHHHH
Confidence            678899999999999988888875 99999999999887765421   11  111   011222222 222333334444


Q ss_pred             HHHh----hhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          210 TWAC----HKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       210 ~~a~----~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      +.++    +..++..++.+.++.|+++.++++++++|+++..+++|.++-+.|+.++...
T Consensus        79 ~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         79 ALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            4455    4567788899999999999999999999999999999999999999887743

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.34  E-value=8.1e-07  Score=68.64  Aligned_cols=83  Identities=23%  Similarity=0.295  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHH
Q 022226           39 VYSNAFAAIFILLPSTFIYYRNRTR-PPLTVSIICKIFGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILAL  116 (300)
Q Consensus        39 ~~R~~~a~l~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~gl~g-~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~  116 (300)
                      .+|+.++.++ +......+++.+.. +..+.+.+.+....|+++ ..++.++++|+++.+ +.++.+.++.|+++.++++
T Consensus         2 a~r~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLF-LLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHH-HHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            5899999998 77776664332110 122234456777778888 689999999999999 5899999999999999999


Q ss_pred             HHhccCc
Q 022226          117 ISRGIDC  123 (300)
Q Consensus       117 ~~l~e~~  123 (300)
                      +++|||.
T Consensus        80 ~~~~er~   86 (113)
T PF13536_consen   80 LFFKERL   86 (113)
T ss_pred             HHhcCCC
Confidence            9999993

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.26  E-value=5.3e-05  Score=64.18  Aligned_cols=247  Identities=12%  Similarity=0.107  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 022226           14 ECLEVGSSTLNKAAMNK-GTS-DFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVG   91 (300)
Q Consensus        14 ~~~w~~~~~~~K~~~~~-~~~-p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~a   91 (300)
                      ++.--.+..-.|..++. |.+ -+.+.+.+.+...+. ++.+-+.+.-+.|     ..+........++....-+.---+
T Consensus        15 c~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~-l~iLk~l~~~~fR-----~t~aK~WfpiSfLLv~MIyt~SKs   88 (309)
T COG5070          15 CFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVG-LLILKFLRLVEFR-----LTKAKKWFPISFLLVVMIYTSSKS   88 (309)
T ss_pred             HHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHH-HHHHHHHhHhhee-----hhhhhhhcCHHHHHHHHHHhcccc
Confidence            33333455556666544 222 245566777766665 5554333222221     111222223333333444444567


Q ss_pred             ccccChhhHhhhhhhhHHHHHHHHHHHhccC---------------------c----------cccchh--hhHHHHHHH
Q 022226           92 IGYSSPTLSSAIVDLTPAFTFILALISRGID---------------------C----------DFVQGA--STSGSFFLS  138 (300)
Q Consensus        92 l~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~---------------------~----------~~~~G~--~l~a~~~~a  138 (300)
                      ++|.+...-+++-+++.+.++..-..++|.|                     .          ....|-  +...+++-+
T Consensus        89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Nclssa  168 (309)
T COG5070          89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSA  168 (309)
T ss_pred             eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHH
Confidence            9999999999999999999999999999888                     1          112344  677777778


Q ss_pred             HHHHHHHHHHh--hcCchhHHHHHHHHHHHHHHHHHHHHhcCCC-Cccc-ccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 022226          139 LLYIVQTSIIR--EYPEELMATFICCVFVTIQSTVVALIAERNP-NSWR-LKPDTELIAIGCSAFFAVALRSLAHTWACH  214 (300)
Q Consensus       139 ~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~  214 (300)
                      .+-...|+..+  ...+ ...+++..+.+.+.++.+..++|++. .+.. ..+.....++...|+.+-+++| .-.|.++
T Consensus       169 afVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy-~saWcvr  246 (309)
T COG5070         169 AFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY-CSAWCVR  246 (309)
T ss_pred             HHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh-ccceeEe
Confidence            88776665433  2223 67889999999999999999887642 2111 1123446677788876666665 5678999


Q ss_pred             hcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchh
Q 022226          215 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  268 (300)
Q Consensus       215 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~  268 (300)
                      -.+++.-|++..+.-.-..+-|.+++||+.+...+....+=..+-.++...+++
T Consensus       247 VtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         247 VTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             ehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999887766555555544433

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.08  E-value=7e-05  Score=66.56  Aligned_cols=136  Identities=16%  Similarity=0.152  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .+..++.|+......|...++..+...........+.+...+......  ......  ...+......+.+.....+.++
T Consensus        12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   87 (292)
T COG0697          12 LLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP--RGLRPA--LRPWLLLLLLALLGLALPFLLL   87 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc--cccccc--ccchHHHHHHHHHHHHHHHHHH
Confidence            666778888888877776665233244445466666655333322111  001111  1113455566677888999999


Q ss_pred             HHHhhhcCCceeecchhhHHHHHHHHHH-HHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          210 TWACHKKGPVYVSMYKPLGIVFAIIMGV-TLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~l~Pi~a~i~~~-~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      +.++++.++..++.+.+..|++..+++. ++++|+++..++.|..+.+.|+.++.......
T Consensus        88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          88 FLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            9999999999999999999999999997 77799999999999999999999988755443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.06  E-value=2.7e-05  Score=67.92  Aligned_cols=239  Identities=12%  Similarity=0.064  Sum_probs=149.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCC--CCHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhh
Q 022226           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRT---RPP--LTVSIICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLT  107 (300)
Q Consensus        33 ~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~---~~~--~~~~~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~  107 (300)
                      .|...++.+.+....+ -..+.....+-.+   .|+  ++.+....+.-....-.++-.+-.+.++|.+.+.--+=-++.
T Consensus        60 ~plf~t~~qcLvt~~~-c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLt  138 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSI-CLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLT  138 (347)
T ss_pred             cHHHHHHHHHHHHHHH-HHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchh
Confidence            4777777887776665 4444333222111   122  233332322222222122333345567777777766677788


Q ss_pred             HHHHHHHHHHHhccC----------------------c-----cccchh--hhHHHHHHHHHHHHHHHHHhhcCc-hhHH
Q 022226          108 PAFTFILALISRGID----------------------C-----DFVQGA--STSGSFFLSLLYIVQTSIIREYPE-ELMA  157 (300)
Q Consensus       108 Pi~~~ila~~~l~e~----------------------~-----~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~-~~~~  157 (300)
                      -+|+.++.++++|+|                      +     -...|.  +..|.++-|+..+..||.-....+ ....
T Consensus       139 tvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~l  218 (347)
T KOG1442|consen  139 TVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRL  218 (347)
T ss_pred             hhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhh
Confidence            899999999999999                      1     113666  888888888888877765433332 3678


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCccc--cc-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHH
Q 022226          158 TFICCVFVTIQSTVVALIAERNPNSWR--LK-PDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAII  234 (300)
Q Consensus       158 ~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i  234 (300)
                      +.+..+.+.++++|...+.++-...+.  .. ....|..+...|+++-.++|.-. +=+|-.+|-.=.+-....-..=.+
T Consensus       219 t~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg-~QIK~TSplThnISgTAka~aQTv  297 (347)
T KOG1442|consen  219 TAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTG-WQIKVTSPLTHNISGTAKAAAQTV  297 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheee-EEEEecccceeeecHhHHHHHHHH
Confidence            889999999999888776544221122  11 23346666666665544444221 234444444444444555566688


Q ss_pred             HHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhcc
Q 022226          235 MGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  273 (300)
Q Consensus       235 ~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~~  273 (300)
                      ++..+++|..+..-+-|-+++++|-..+++-|+++.+|+
T Consensus       298 lAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~  336 (347)
T KOG1442|consen  298 LAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence            999999999999999999999999998887666665443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.99  E-value=5.9e-05  Score=68.07  Aligned_cols=127  Identities=12%  Similarity=0.068  Sum_probs=90.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .++++++|+...+..|+.. ..+. .+..  ...+++++...+......+.  .+  ....+..-...|+ .=++++..|
T Consensus         6 ~lia~~~wGs~g~~~k~~~-g~~~-~~~~--~~~~g~l~~~~~~~~~~~~~--~~--~~~~~~~g~l~G~-~w~ig~~~~   76 (290)
T TIGR00776         6 ALIPALFWGSFVLINVKIG-GGPY-SQTL--GTTFGALILSIAIAIFVLPE--FW--ALSIFLVGLLSGA-FWALGQINQ   76 (290)
T ss_pred             HHHHHHHHhhhHHHHhccC-CCHH-HHHH--HHHHHHHHHHHHHHHHhCCc--cc--ccHHHHHHHHHHH-HHHhhhhhH
Confidence            6889999999999888765 3433 3333  34555555554444432211  11  1122222222222 356778999


Q ss_pred             HHHhhhcCCceeecchh-hHHHHHHHHHHHHhcCcccchh----hhhHHHHhhhhhhhhcc
Q 022226          210 TWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGS----VVGATIVAFGFYSVIWG  265 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~-l~Pi~a~i~~~~~l~E~~~~~~----~iG~~lil~Gv~l~~~~  265 (300)
                      ..++++.|.+.+-++.+ +.++++.+++.+++||+.+..+    ++|.++++.|+.++...
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            99999999999999988 9999999999999999999999    99999999999887544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.90  E-value=3.5e-05  Score=59.89  Aligned_cols=69  Identities=20%  Similarity=0.315  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCceeecc-hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          198 AFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       198 ~i~~t~~~~~l~~~a~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      .++..+++|+++..++++++.+.+=.+ .-+--+...+.|++++||++|+.+++|..+++.|+...+...
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            445667899999999999998876444 346777788999999999999999999999999999886543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.88  E-value=0.00013  Score=64.38  Aligned_cols=136  Identities=13%  Similarity=0.185  Sum_probs=104.6

Q ss_pred             cchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCccc-ccCchhHHHHHHHHHHHH
Q 022226          126 VQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWR-LKPDTELIAIGCSAFFAV  202 (300)
Q Consensus       126 ~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~i~~t  202 (300)
                      ..|.  .+.|-+.|+..... -|+.++.+. ..+..+..+++.+....+.....+...-++ ...+..+......++. -
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y-~kll~~~~~-~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLY-FKLLEPLPA-TEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHH-HHHHccCCH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            3566  66666777766544 445566775 889999999998887777666544322222 2234556666666654 4


Q ss_pred             HHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          203 ALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       203 ~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      ...+.+|.|+.++-....+|.-.++.|++.++.|.++++|+++..|++..++...|+..-.+
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999886654

>TIGR00803 nst UDP-galactose transporter

Probab=97.86  E-value=4.5e-05  Score=65.96  Aligned_cols=62  Identities=15%  Similarity=0.134  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhh
Q 022226          200 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYS  261 (300)
Q Consensus       200 ~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l  261 (300)
                      +...++..+-.+.+++.++...+....++++++.+++++++||+++..++.|+.+++.|+++
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34566677788999999999999999999999999999999999999999999999999875

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.83  E-value=0.00042  Score=55.95  Aligned_cols=117  Identities=18%  Similarity=0.203  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-----CC-----CHH
Q 022226            6 VTAVMVAVECLEVGSSTLNKAAMNK------GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP-----PL-----TVS   69 (300)
Q Consensus         6 ~~~~l~~~~~~w~~~~~~~K~~~~~------~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~-----~~-----~~~   69 (300)
                      |....+.++++.+...+..|..+++      ..++..+..+-...+.++ ++|......+....+     ..     +.+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~-l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFII-LLPLAFLLEGPQLSSFFSEIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhHHHHhhhhhhcchHH
Confidence            4567889999999999999998766      589999999999999999 998877654432100     00     224


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCc
Q 022226           70 IICKIFGLGLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDC  123 (300)
Q Consensus        70 ~~~~~~~~gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~  123 (300)
                      .+..+...|+++...+...+..++++++...++....-.+.+.++++++++|+.
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~  133 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI  133 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC
Confidence            455666677777888889999999999999999999999999999999999993

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.76  E-value=0.00019  Score=59.77  Aligned_cols=184  Identities=16%  Similarity=0.207  Sum_probs=119.6

Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC--------------------------ccccchh--hhHH
Q 022226           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID--------------------------CDFVQGA--STSG  133 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~--------------------------~~~~~G~--~l~a  133 (300)
                      .+.++.|..+++.++++.++.+..+.--|+.+++++++|+|                          .+...|.  +..+
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~S  143 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGS  143 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHH
Confidence            67889999999999999999999999999999999999999                          2335788  8889


Q ss_pred             HHHHHHHHHHHHHHHhhcC--c-hhHHHHHHHH---HHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHH
Q 022226          134 SFFLSLLYIVQTSIIREYP--E-ELMATFICCV---FVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSL  207 (300)
Q Consensus       134 ~~~~a~~~v~~~~~~~~~~--~-~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~  207 (300)
                      ++.-++|-+.-|+.....+  + ...+....++   +-....++++ +++  -.+|+......|.++...+...... -+
T Consensus       144 A~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~-~T~--VE~~qsFA~~PWG~l~G~A~L~lAF-N~  219 (290)
T KOG4314|consen  144 AFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILA-FTG--VEHLQSFAAAPWGCLCGAAGLSLAF-NF  219 (290)
T ss_pred             HHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHH-Hhc--hHHHHHHhhCCchhhhhHHHHHHHH-hh
Confidence            9999999998887654432  1 0111111111   1111111111 111  1233322223366665444433322 23


Q ss_pred             HHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          208 AHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       208 l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      +-+.++....|...|+-+.....--...+.++-+-..+.....|..++..|..+....+.++
T Consensus       220 ~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~~  281 (290)
T KOG4314|consen  220 LINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDKD  281 (290)
T ss_pred             heeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccchh
Confidence            44566777777777777666666666777765555678888899999999998887655443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.73  E-value=0.025  Score=52.02  Aligned_cols=256  Identities=12%  Similarity=0.068  Sum_probs=141.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH-HHHHHHHHHHHHH--HHHHhhcCC--CCCCCHHHHHHHHHHH
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVY-SNAFAAIFILLPS--TFIYYRNRT--RPPLTVSIICKIFGLG   78 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~-R~~~a~l~~ll~~--~~~~~~~~~--~~~~~~~~~~~~~~~g   78 (300)
                      .-+++..++++++||+.++-.|.. ++ .+ ++.-+. -.+++.+  +.|.  ..+.-+...  ....+.+.+..-.+.|
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~-wE~~W~v~gi~~wl--~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-KK-WS-WETMWSVGGIFSWL--ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-CC-Cc-hhHHHHHHHHHHHH--HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            457888899999999999999983 33 33 222211 0111111  1120  011111000  0123455556666677


Q ss_pred             HHHHHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhccC----------------------------------c
Q 022226           79 LISCCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRGID----------------------------------C  123 (300)
Q Consensus        79 l~g~~~~~~~~~al~~~~~~~a~~i-~~l~Pi~~~ila~~~l~e~----------------------------------~  123 (300)
                      .+-..++..++.++++...+.+--+ ..++-+...++..++++|-                                  +
T Consensus        81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            7768899999999999988887755 3466667777777766653                                  0


Q ss_pred             ----------cccchh--hhHHHHHHHHHH-------HHHHHH-HhhcCchhHH--HHHHHHHHHHHHHH-HHHH---hc
Q 022226          124 ----------DFVQGA--STSGSFFLSLLY-------IVQTSI-IREYPEELMA--TFICCVFVTIQSTV-VALI---AE  177 (300)
Q Consensus       124 ----------~~~~G~--~l~a~~~~a~~~-------v~~~~~-~~~~~~~~~~--~~~~~~~~~i~~~~-~~~~---~~  177 (300)
                                +...|.  ++++.+.++.|.       ...+.. ..+.+++...  ....++.++...-+ +...   -+
T Consensus       161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~  240 (345)
T PRK13499        161 KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKN  240 (345)
T ss_pred             ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence                      113555  888888888888       332221 1122221111  11222344443332 2221   11


Q ss_pred             CCC---CcccccCchhHHHHH--HHHHHHHHHHHHHHHHHhhhcCCceeec---ch-hhHHHHHHHHHHHHhcCccc---
Q 022226          178 RNP---NSWRLKPDTELIAIG--CSAFFAVALRSLAHTWACHKKGPVYVSM---YK-PLGIVFAIIMGVTLLGDTLY---  245 (300)
Q Consensus       178 ~~~---~~~~~~~~~~~~~l~--~~~i~~t~~~~~l~~~a~~~~~~~~~s~---~~-~l~Pi~a~i~~~~~l~E~~~---  245 (300)
                      ++.   .+...+....+-..+  .++-+.=.+++..|..+-++.|......   +. -+.-+++.++|. +++|.=+   
T Consensus       241 ~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~  319 (345)
T PRK13499        241 KDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASR  319 (345)
T ss_pred             CCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCc
Confidence            111   111111000022211  1122234466777777888886654443   33 666699999999 4999877   


Q ss_pred             ---chhhhhHHHHhhhhhhhhcc
Q 022226          246 ---LGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       246 ---~~~~iG~~lil~Gv~l~~~~  265 (300)
                         ...++|.++++.|..++...
T Consensus       320 k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        320 RPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhc
Confidence               56789999999998887654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.72  E-value=0.00046  Score=62.62  Aligned_cols=129  Identities=16%  Similarity=0.140  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHhhcC-c--hhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 022226          139 LLYIVQTSIIREYP-E--ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHK  215 (300)
Q Consensus       139 ~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~  215 (300)
                      .+.+.+.++.++.+ .  +..+++.++.+..+...+.......+..     ....+.-....++ ...++..+-+.++++
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKYAILSF-LFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence            34455666554422 2  4678889998888877766554431111     1111223333333 556677888999999


Q ss_pred             cCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhhcc
Q 022226          216 KGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMI  273 (300)
Q Consensus       216 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~~~  273 (300)
                      ++...-.++....|+..+++++++++++.+..++.+..++..|+.+....+.+++++.
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            9999999999999999999999999999999999999999999999887665554443

; GO: 0055085 transmembrane transport

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.66  E-value=0.0028  Score=55.80  Aligned_cols=244  Identities=10%  Similarity=0.076  Sum_probs=151.2

Q ss_pred             HHHHHHHHHHHhc---CC----ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CC--------C--HHHHHHHHHHHH
Q 022226           18 VGSSTLNKAAMNK---GT----SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRP-PL--------T--VSIICKIFGLGL   79 (300)
Q Consensus        18 ~~~~~~~K~~~~~---~~----~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~-~~--------~--~~~~~~~~~~gl   79 (300)
                      +.+.+..|-+-+.   |.    +|...+..-|+.-.++ +..+..++.|....- ..        +  .-+-......++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflC-l~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal   94 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLC-LAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPAL   94 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHH
Confidence            3455666765321   22    3666666666666566 666666655532210 00        0  001123333566


Q ss_pred             HHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC----------------------------------ccc
Q 022226           80 ISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID----------------------------------CDF  125 (300)
Q Consensus        80 ~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~----------------------------------~~~  125 (300)
                      +...+..++|.|+.+++++.-..+-...-+|+.+++.-+++.+                                  +.-
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~i  174 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSI  174 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccc
Confidence            6688888999999999999999999999999999999999887                                  122


Q ss_pred             cchh--hhHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHHHh----cCCCCcccccCc---hhHH---
Q 022226          126 VQGA--STSGSFFLSLLYIVQTSIIREYP-EELMATFICCVFVTIQSTVVALIA----ERNPNSWRLKPD---TELI---  192 (300)
Q Consensus       126 ~~G~--~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~---~~~~---  192 (300)
                      ..|+  .+++-+..++-.+.-.|..++.+ +|.....|.-++|.+.+..++..+    .++.  ++..+.   ..|.   
T Consensus       175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s--fS~~~~g~~eD~~~~~  252 (372)
T KOG3912|consen  175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS--FSCNPRGVLEDWGDAF  252 (372)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc--CcCCCCcchhhHHHHH
Confidence            4788  88888888988877666544432 458899999988855444433322    1111  111000   0010   


Q ss_pred             H------HHHHHHHHHHHHHHHHHH----HhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhh
Q 022226          193 A------IGCSAFFAVALRSLAHTW----ACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  262 (300)
Q Consensus       193 ~------l~~~~i~~t~~~~~l~~~----a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~  262 (300)
                      +      .+++++.+..++-..+|.    --|..+++.=...-.+...+-=+++..+..|.+...++.|-++.+.|+.++
T Consensus       253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY  332 (372)
T ss_pred             HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0      122233333333333432    234445555555556666666677778888999999999999999999988


Q ss_pred             hc
Q 022226          263 IW  264 (300)
Q Consensus       263 ~~  264 (300)
                      +.
T Consensus       333 ~~  334 (372)
T KOG3912|consen  333 NQ  334 (372)
T ss_pred             HH
Confidence            63

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.61  E-value=0.00018  Score=55.20  Aligned_cols=68  Identities=12%  Similarity=0.131  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCceeecc-hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          198 AFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       198 ~i~~t~~~~~l~~~a~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      .++..+++|+++..+++++|.+.+=.+ .-+--+.+.+.|++++||++|+.+++|..+++.|+...+..
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            345667889999999999998875333 44566777999999999999999999999999999988653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.60  E-value=0.0013  Score=59.62  Aligned_cols=188  Identities=15%  Similarity=0.194  Sum_probs=107.8

Q ss_pred             HHHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC-------------------------ccc--c
Q 022226           75 FGLGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID-------------------------CDF--V  126 (300)
Q Consensus        75 ~~~gl~g-~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~-------------------------~~~--~  126 (300)
                      .+.|+.. .++..+-+.|+.+.|++..+-+..+.-++..+++.+++|||                         ++.  .
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t  132 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHT  132 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCC
Confidence            3455555 66777888999999999999999999999999999999999                         000  0


Q ss_pred             ----------chh----hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH-------HHHHHHhcCCCCcccc
Q 022226          127 ----------QGA----STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQS-------TVVALIAERNPNSWRL  185 (300)
Q Consensus       127 ----------~G~----~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-------~~~~~~~~~~~~~~~~  185 (300)
                                .+.    .+...+...+.....+|..++ +- ........++|+.-.       ..+....+++ .++  
T Consensus       133 ~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~-~i-~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~-~~f--  207 (300)
T PF05653_consen  133 LDELIALLSQPGFLVYFILVLVLILILIFFIKPRYGRR-NI-LVYISICSLIGSFTVLSAKAISILIKLTFSGD-NQF--  207 (300)
T ss_pred             HHHHHHHhcCcceehhHHHHHHHHHHHHHhhcchhccc-ce-EEEEEEeccccchhhhHHHHHHHHHHHHhcCc-hhh--
Confidence                      111    111111112221122221111 10 111111111221110       0111111121 112  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHH-HHHHHHHHHHhcCcc--cc----hhhhhHHHHhhh
Q 022226          186 KPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGI-VFAIIMGVTLLGDTL--YL----GSVVGATIVAFG  258 (300)
Q Consensus       186 ~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~P-i~a~i~~~~~l~E~~--~~----~~~iG~~lil~G  258 (300)
                      .++..|..++.. +.+........|+++++.+++.+.++.+..= ..+++-|.++++|.-  +.    ....|...++.|
T Consensus       208 ~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G  286 (300)
T PF05653_consen  208 TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG  286 (300)
T ss_pred             hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence            123345444333 4456677788889999999999998887654 455666888999853  44    346678888999


Q ss_pred             hhhhhccchh
Q 022226          259 FYSVIWGQSE  268 (300)
Q Consensus       259 v~l~~~~~~~  268 (300)
                      +++...+++.
T Consensus       287 V~lL~~~~~~  296 (300)
T PF05653_consen  287 VFLLSSSKDK  296 (300)
T ss_pred             hheeeccCch
Confidence            9988754443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.45  E-value=0.00015  Score=63.11  Aligned_cols=134  Identities=12%  Similarity=0.105  Sum_probs=85.0

Q ss_pred             cchh-hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHH
Q 022226          126 VQGA-STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVAL  204 (300)
Q Consensus       126 ~~G~-~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~  204 (300)
                      .+|. .+.-+..+....++.++..+..|  .......+++-.....|...+..+.  .+......-|+  +.=|+.+ ..
T Consensus        37 ~~gl~l~~vs~ff~~~~vv~t~~~e~~p--~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~mG-~t  109 (346)
T KOG4510|consen   37 NLGLLLLTVSYFFNSCMVVSTKVLENDP--MELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGFMG-FT  109 (346)
T ss_pred             ccCceehhhHHHHhhHHHhhhhhhccCh--hHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehhhh-hh
Confidence            3566 22222666666666666655433  3444444444333333333322111  11111111122  2223323 23


Q ss_pred             HHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          205 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       205 ~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      +..+.++++++.+-+.+..+.+..|++++++++.+++|+.+.....|..+.+.|++++.+..
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            45566779999999999999999999999999999999999999999999999999988643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.42  E-value=0.0017  Score=57.41  Aligned_cols=82  Identities=15%  Similarity=0.146  Sum_probs=64.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecch-hhHHHHHHHHHHHHhcCcccchhhh----hHHHHhhhhhhhhc
Q 022226          190 ELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTLYLGSVV----GATIVAFGFYSVIW  264 (300)
Q Consensus       190 ~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~-~l~Pi~a~i~~~~~l~E~~~~~~~i----G~~lil~Gv~l~~~  264 (300)
                      .++.-+..|+ .=.+++..++.++++.|.+++.++. -++.+.+.++++++|||.-+..+.+    +.++++.|+++..+
T Consensus        44 ~~~~~~lsG~-~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   44 SFIVAFLSGA-FWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            4555555555 4568899999999999999999998 5677778999999999988766543    67788899998887


Q ss_pred             cchhhhhc
Q 022226          265 GQSEEEKM  272 (300)
Q Consensus       265 ~~~~~~~~  272 (300)
                      ++++++++
T Consensus       123 ~~~~~~~~  130 (269)
T PF06800_consen  123 QDKKSDKS  130 (269)
T ss_pred             cccccccc
Confidence            66665543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.35  E-value=0.0028  Score=58.12  Aligned_cols=78  Identities=14%  Similarity=0.057  Sum_probs=68.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchh
Q 022226          190 ELIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSE  268 (300)
Q Consensus       190 ~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~  268 (300)
                      .|+.-+.+++ .-+.+-++...|+++.+.+.+.++.....++++++++++++|++++.+++|..+.+.|+.++...+..
T Consensus        78 ~~w~y~lla~-~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   78 PWWKYFLLAL-LDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             hHHHHHHHHH-HHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            3444445565 56788999999999999999999999999999999999999999999999999999999988876543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.33  E-value=0.0054  Score=53.90  Aligned_cols=225  Identities=12%  Similarity=0.043  Sum_probs=125.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccc-ChhhHhhhhhhhHHHH
Q 022226           33 SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQTCLYVGIGYS-SPTLSSAIVDLTPAFT  111 (300)
Q Consensus        33 ~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~al~~~-~~~~a~~i~~l~Pi~~  111 (300)
                      +-..++|.+|++-+.- =++.. -+....+ ++.+.|++.....+  | +..+++-.+++++- +-..=-++-+-.++.+
T Consensus        32 sgNLITFaqFlFia~e-Glif~-skf~~~k-~kiplk~Y~i~V~m--F-F~vnv~NN~al~f~I~~PlHiIfRsgsll~n  105 (330)
T KOG1583|consen   32 SGNLITFAQFLFIATE-GLIFT-SKFFTVK-PKIPLKDYAITVAM--F-FIVNVTNNYALKFNIPMPLHIIFRSGSLLAN  105 (330)
T ss_pred             CeeehHHHHHHHHHHh-ceeee-ccccccC-CCCchhhhheehhe--e-eeeeeeccceeeecccceEEEEEecCcHHHH
Confidence            3367788888876664 33322 1111111 44455444433322  2 23334445666653 4444445667788999


Q ss_pred             HHHHHHHhccC-------------------------------------------ccccchh--hhHHHHHHHHHHHHHHH
Q 022226          112 FILALISRGID-------------------------------------------CDFVQGA--STSGSFFLSLLYIVQTS  146 (300)
Q Consensus       112 ~ila~~~l~e~-------------------------------------------~~~~~G~--~l~a~~~~a~~~v~~~~  146 (300)
                      ++++++++|+|                                           ..|.+|.  ...+-+.-|.-.+.+.+
T Consensus       106 M~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~  185 (330)
T KOG1583|consen  106 MILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQET  185 (330)
T ss_pred             HHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988                                           1224666  22222222222233433


Q ss_pred             HHhhcCc-hhHHHHHHHHHHHHHHHHHHHH--------hcCCC---CcccccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 022226          147 IIREYPE-ELMATFICCVFVTIQSTVVALI--------AERNP---NSWRLKPDTELIAIGCSAFFAVALRSLAHTWACH  214 (300)
Q Consensus       147 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~--------~~~~~---~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~  214 (300)
                      .-+++.. +-...++.=+.+.+.++...-=        ...+.   ......-+..|..++...+ ..-.+.-.-+..-.
T Consensus       186 ~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~Qy~CikgVy~L~t  264 (330)
T KOG1583|consen  186 TYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-TQYFCIKGVYILTT  264 (330)
T ss_pred             HHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-HHHHHHHhhhhhhc
Confidence            3333321 2456667666655544432110        00000   0111111233444443322 22222223334456


Q ss_pred             hcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          215 KKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       215 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +..+-.++++..+.=.++.++|.+.++.+++++.++|.++++.|..+...
T Consensus       265 e~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  265 ETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             eecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            67788899999999999999999999999999999999999999988764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.30  E-value=0.00069  Score=51.13  Aligned_cols=67  Identities=21%  Similarity=0.321  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHhhhcCCcee-ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          199 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~-s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      +++-.++|.+...++|++|.+.+ ++..-+-.+.+.+.|++++||+++...++|.++++.|+...+..
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34557789999999999987764 44455556667889999999999999999999999999987653

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.25  E-value=0.00091  Score=50.78  Aligned_cols=66  Identities=18%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHhhhcCCcee-ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          199 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~-s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      +++.+++|++...++|++|.+.+ +...-+-.+.+.+.|++++||++|+.+++|..+++.|+...+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            44667889999999999988764 4444466677789999999999999999999999999998754

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.15  E-value=0.0012  Score=50.45  Aligned_cols=65  Identities=18%  Similarity=0.208  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHhhhcCCcee-ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          199 FFAVALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~-s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      +....++|++...++|++|.+.+ +...-+--+.+.+.|++++||++|+.+++|.++++.|+...+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34567889999999999998764 344445566678899999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.11  E-value=0.00091  Score=60.61  Aligned_cols=117  Identities=17%  Similarity=0.213  Sum_probs=82.1

Q ss_pred             cccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHH
Q 022226          124 DFVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFA  201 (300)
Q Consensus       124 ~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~  201 (300)
                      ++.+|.  +++++++.+....++|+-..|.+. ...-.-.-        ...+        +.   ...|+    .|+..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~~--------l~---~~~W~----~G~~~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRSY--------LR---RPLWW----IGLLL   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhHH--------Hh---hHHHH----HHHHH
Confidence            456788  889999999999988875544332 00000000        0000        00   01121    22333


Q ss_pred             HHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhc
Q 022226          202 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       202 t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~  264 (300)
                      ..++..+...++...|++.++++..+.-++..+++..++||+++..++.|+++++.|..++..
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            445566777888999999999999999999999999999999999999999999999876653

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.09  E-value=0.0075  Score=48.20  Aligned_cols=128  Identities=13%  Similarity=0.136  Sum_probs=89.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .+.+...-+.-...+.++.++..++...+.+.+..|.+.+..+....++.  ++.......|+..+ -|+++ ++-....
T Consensus         6 a~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG-~~~V~~~   81 (138)
T PF04657_consen    6 ALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLG-VFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHH-HHHHHHH
Confidence            45666777777778888888887568999999999999888887777653  22211112232222 34433 4445677


Q ss_pred             HHHhhhcCCceeecch-hhHHHHHHHHHHH----HhcCcccchhhhhHHHHhhhhhh
Q 022226          210 TWACHKKGPVYVSMYK-PLGIVFAIIMGVT----LLGDTLYLGSVVGATIVAFGFYS  261 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~-~l~Pi~a~i~~~~----~l~E~~~~~~~iG~~lil~Gv~l  261 (300)
                      ...++++|++.+.... .=+-+.+.+++.+    .-++++++..++|.++++.|+++
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7889999998866554 4466677777775    34457899999999999999864

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.07  E-value=0.003  Score=55.33  Aligned_cols=140  Identities=13%  Similarity=0.117  Sum_probs=90.8

Q ss_pred             cchh-hhHHHHHH-HHHHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHHHHHHhcCCCCccccc---CchhHHHHHHHHH
Q 022226          126 VQGA-STSGSFFL-SLLYIVQTSIIREYPEE-LMATFICCVFVTIQSTVVALIAERNPNSWRLK---PDTELIAIGCSAF  199 (300)
Q Consensus       126 ~~G~-~l~a~~~~-a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~i  199 (300)
                      ..|. ++.++++. |.-.-++.+..+..+.+ ..+.++...+|.+.++.....+++-...|...   +.......++.+.
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            4777 55555443 33334555555554431 44566666667666655555454433333322   1112333333322


Q ss_pred             HHHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          200 FAVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       200 ~~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                       .+.++...-...++--|+..++.+....-..++++|++++..+++.+..-|..+|+.|+++-.+.|
T Consensus       269 -~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 -AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             -HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence             344555555567778899999999999999999999999999999999999999999999877655

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.91  E-value=0.0017  Score=48.18  Aligned_cols=57  Identities=23%  Similarity=0.294  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHhhhcCCceeec-chhhHHHHHHHHHHHHhcCcccchhhhhHHHH
Q 022226          199 FFAVALRSLAHTWACHKKGPVYVSM-YKPLGIVFAIIMGVTLLGDTLYLGSVVGATIV  255 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~s~-~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~li  255 (300)
                      +...+++++++..++|+.+.+.+=+ ..-+..+...+.|.+++||++|..+++|..+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3466788999999999999998844 45588889999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.90  E-value=0.0049  Score=56.63  Aligned_cols=134  Identities=9%  Similarity=0.055  Sum_probs=85.7

Q ss_pred             cchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHH--HHHHHHHHH-HHHHHhcCCC-CcccccCchhHHHHHHHHH
Q 022226          126 VQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFIC--CVFVTIQST-VVALIAERNP-NSWRLKPDTELIAIGCSAF  199 (300)
Q Consensus       126 ~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~--~~~~~i~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~~~i  199 (300)
                      .+|.  .+++++||+.+.+-+|| .++.+  .+.. |-  .++..++.. ..+.+..++. ......+...+......|+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            4677  89999999999988887 55554  2333 32  112111111 1122212221 1222123334444444554


Q ss_pred             HHHHHHHHHHHHHhhhcCCceeecch-hhHHHHHHHHHHHHhcCcc---c----chhhhhHHHHhhhhhhhhc
Q 022226          200 FAVALRSLAHTWACHKKGPVYVSMYK-PLGIVFAIIMGVTLLGDTL---Y----LGSVVGATIVAFGFYSVIW  264 (300)
Q Consensus       200 ~~t~~~~~l~~~a~~~~~~~~~s~~~-~l~Pi~a~i~~~~~l~E~~---~----~~~~iG~~lil~Gv~l~~~  264 (300)
                       .=.++...+..+++++|.+..-++. -++-+.+.+++.+++||-.   +    ..-++|.++++.|+.+..+
T Consensus        82 -~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         82 -LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             -HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence             4568899999999999999977665 4778899999999999754   2    2367788899999999887

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.89  E-value=0.00032  Score=60.46  Aligned_cols=238  Identities=13%  Similarity=0.071  Sum_probs=149.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 022226            6 VTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQ   85 (300)
Q Consensus         6 ~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~   85 (300)
                      .++..++=++.||+.+.+.-.-   |=.|.+-+.--.+.|.++ -+.++++ .+    |..+...+..-++.|.+-..+|
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALif-aiiv~~~-~~----p~~T~~~~iv~~isG~~Ws~GQ   73 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIF-AIIVFLF-VS----PELTLTIFIVGFISGAFWSFGQ   73 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHH-HHHHhee-ec----CccchhhHHHHHHhhhHhhhhh
Confidence            4567788899999988776543   335655555444444444 3333322 22    4456656666666677768899


Q ss_pred             HHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhccC------------------------------------ccccch
Q 022226           86 TCLYVGIGYSSPTLSSAIVD-LTPAFTFILALISRGID------------------------------------CDFVQG  128 (300)
Q Consensus        86 ~~~~~al~~~~~~~a~~i~~-l~Pi~~~ila~~~l~e~------------------------------------~~~~~G  128 (300)
                      ..-+-|+++++.+.+--+.+ .+=+-+.+++.+.++|.                                    ++...|
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkg  153 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKG  153 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhh
Confidence            99999999999999887755 55567778888888888                                    112355


Q ss_pred             h--hhHHHHHHHHHHHHHHHHHhh-cCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHH
Q 022226          129 A--STSGSFFLSLLYIVQTSIIRE-YPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALR  205 (300)
Q Consensus       129 ~--~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~  205 (300)
                      .  .+.+.++|-.|.++.+...-+ .+. .--....+.++++.+.   ..-+ +.    ......|..++ -|+ .=+++
T Consensus       154 i~~L~iSt~GYv~yvvl~~~f~v~g~sa-iLPqAiGMv~~ali~~---~~~~-~~----~~~K~t~~nii-~G~-~Wa~G  222 (288)
T COG4975         154 IVILLISTLGYVGYVVLFQLFDVDGLSA-ILPQAIGMVIGALILG---FFKM-EK----RFNKYTWLNII-PGL-IWAIG  222 (288)
T ss_pred             eeeeeeeccceeeeEeeeccccccchhh-hhHHHHHHHHHHHHHh---hccc-cc----chHHHHHHHHh-hHH-HHHhh
Confidence            5  667888888887766554321 111 2222334444443322   1111 10    01122333332 222 23456


Q ss_pred             HHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhh----hhHHHHhhhhhhhh
Q 022226          206 SLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSV----VGATIVAFGFYSVI  263 (300)
Q Consensus       206 ~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~----iG~~lil~Gv~l~~  263 (300)
                      -..+..+.++.|.+..=.+.-+--+.+.+-|+++++|+-|..++    +|.++++.|..+.-
T Consensus       223 Nl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         223 NLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            66777788899998888888888999999999999999887754    57777777765543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.73  E-value=0.031  Score=50.25  Aligned_cols=229  Identities=12%  Similarity=0.077  Sum_probs=130.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-
Q 022226            3 SVGVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-   81 (300)
Q Consensus         3 ~~~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-   81 (300)
                      +.++..+...+.+..|.+.++-|....+ ...   ...|                ..+ . +..-.+.  +....|.+- 
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~r----------------a~~-g-g~~yl~~--~~Ww~G~ltm   74 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGLR----------------AGE-G-GYGYLKE--PLWWAGMLTM   74 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hccc----------------ccC-C-Ccchhhh--HHHHHHHHHH
Confidence            4566666777777777777777776544 100   0111                011 1 1111112  344566665 


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCccc------------------------------------
Q 022226           82 CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF------------------------------------  125 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~------------------------------------  125 (300)
                      .++...-|.|..+.+++..+-+..+.-+..++++..+++||-++                                    
T Consensus        75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~  154 (335)
T KOG2922|consen   75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELA  154 (335)
T ss_pred             HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHh
Confidence            67777778888999999999999999999999999999999000                                    


Q ss_pred             -cchh-----hhHHHHHHHHHHHHHHHHHhhcC--chhHHHHHHHHHHHHH--H-----HHHHHHhcCCCCcccccCchh
Q 022226          126 -VQGA-----STSGSFFLSLLYIVQTSIIREYP--EELMATFICCVFVTIQ--S-----TVVALIAERNPNSWRLKPDTE  190 (300)
Q Consensus       126 -~~G~-----~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~--~-----~~~~~~~~~~~~~~~~~~~~~  190 (300)
                       ..+.     .++..++.=.+  ..+   +++.  ..+.......+.|+.-  .     ..+-..+.+++ +.  ..+..
T Consensus       155 ~~~~Fliy~~~iil~~~il~~--~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~-ql--~~~~t  226 (335)
T KOG2922|consen  155 TEPGFLVYVIIIILIVLILIF--FYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN-QL--FYPLT  226 (335)
T ss_pred             cCccHHHHHHHHHHHHHHHhe--eec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc-cc--ccHHH
Confidence             0111     11111111111  111   1111  1122222333332110  0     00111122222 22  22345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCceeecchhhH-HHHHHHHHHHHhcCcc--cc----hhhhhHHHHhhhhhhhh
Q 022226          191 LIAIGCSAFFAVALRSLAHTWACHKKGPVYVSMYKPLG-IVFAIIMGVTLLGDTL--YL----GSVVGATIVAFGFYSVI  263 (300)
Q Consensus       191 ~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~s~~~~l~-Pi~a~i~~~~~l~E~~--~~----~~~iG~~lil~Gv~l~~  263 (300)
                      |..++.... +......-.++|++..++..++++.|.. ..++++-|.++++|.-  +.    ....|...++.|+.+..
T Consensus       227 y~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~  305 (335)
T KOG2922|consen  227 WIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLH  305 (335)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEee
Confidence            666555543 5566677788999999999999887754 5667788999999953  33    25678899999999885


Q ss_pred             c
Q 022226          264 W  264 (300)
Q Consensus       264 ~  264 (300)
                      .
T Consensus       306 ~  306 (335)
T KOG2922|consen  306 R  306 (335)
T ss_pred             e
Confidence            3

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.55  E-value=0.0035  Score=55.14  Aligned_cols=68  Identities=18%  Similarity=0.155  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          202 VALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       202 t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      ..+.-.+.+.++++.+|+.-.+......+++.++++++++.+++..+|++..++..|+.++.......
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            34456677789999999999999999999999999999999999999999999999999988765544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.54  E-value=0.028  Score=48.97  Aligned_cols=120  Identities=13%  Similarity=0.074  Sum_probs=96.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~   83 (300)
                      .+..+.+....+|+..-+.+|.+-+. .+.-.-+..-+..|+++ .+|+-.-+...   .-.+++....-+..|+++ .+
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAavi-v~Pig~~~ag~---~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALI-VLPIGAAQAGP---ALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHH-Hhhhhhhhcch---hhcChHHHHHHHHHHHHhccc
Confidence            45667788999999999999998754 56666677788999999 99987543332   234566666677788898 89


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCccc--cchh
Q 022226           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDF--VQGA  129 (300)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~--~~G~  129 (300)
                      .+.+-..++++.+...-++++++.|.+.++.++++++|....  .+|.
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI  270 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAI  270 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999332  2555

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.52  E-value=0.032  Score=42.82  Aligned_cols=53  Identities=9%  Similarity=0.023  Sum_probs=45.1

Q ss_pred             HHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCcc--ccchh
Q 022226           77 LGLIS-CCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCD--FVQGA  129 (300)
Q Consensus        77 ~gl~g-~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~--~~~G~  129 (300)
                      .++++ ...+.++..++++.+.+.+-.+.++.|+++.+++++++|||-+  ...|.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi   97 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGV   97 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            34455 6788899999999999999999999999999999999999933  34566

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.40  E-value=0.041  Score=44.33  Aligned_cols=133  Identities=13%  Similarity=0.141  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      .+++..+-..-.-++.++.+..++++......+.+|++.+..+.++.+..+ ++.......|+... -|+++..+ -..-
T Consensus        10 ~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~-GG~lGa~~-vt~s   86 (150)
T COG3238          10 AILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWI-GGLLGAIF-VTSS   86 (150)
T ss_pred             HHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHH-ccchhhhh-hhhh
Confidence            566677777777778888888777788899999999999888888755433 22211211232221 22322222 2333


Q ss_pred             HHHhhhcCCce-eecchhhHHHHHHHHHHHHhc----CcccchhhhhHHHHhhhhhhhhcc
Q 022226          210 TWACHKKGPVY-VSMYKPLGIVFAIIMGVTLLG----DTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       210 ~~a~~~~~~~~-~s~~~~l~Pi~a~i~~~~~l~----E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      .....|+|++. +.....-+-+.+++++.+=+.    .+++...++|.+++++|+++.+++
T Consensus        87 ~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          87 ILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             HHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            45667777665 344455566777777766333    468999999999999997665543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.25  E-value=0.015  Score=44.53  Aligned_cols=64  Identities=14%  Similarity=0.124  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHhhhcCCceeecc-hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhh
Q 022226          199 FFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSV  262 (300)
Q Consensus       199 i~~t~~~~~l~~~a~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~  262 (300)
                      ...+..+-..|++.+.+.+-+.+.++ +.+.=+++.+.++++.+|..+...++|+++++.|+.+.
T Consensus        48 f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   48 FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            33455667788999999999999999 58999999999988888888989999999999998764

Many members are annotated as potential transmembrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.21  E-value=0.091  Score=41.46  Aligned_cols=109  Identities=14%  Similarity=0.038  Sum_probs=76.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CC   83 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~   83 (300)
                      +++++++.+.++-+...++.|.++++ .+.......  .+..+.   ..     .  . |       ......|++. .+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~--~~~~~~---~~-----~--~-p-------~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD--FIAALL---AF-----G--L-A-------LRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH--HHHHHH---HH-----h--c-c-------HHHHHHHHHHHHH
Confidence            57888889999999999999999876 544332221  111111   00     1  1 1       2345677777 88


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHH--HhccCcc--ccchh-hhHHH
Q 022226           84 VQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALI--SRGIDCD--FVQGA-STSGS  134 (300)
Q Consensus        84 ~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~--~l~e~~~--~~~G~-~l~a~  134 (300)
                      .+.+|.+++++.+++.+..+.+..+.++.+.++.  ++||+-+  ...|. .++++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~G  116 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLG  116 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999888888885  7999933  34666 43333

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.32  E-value=0.0069  Score=52.40  Aligned_cols=128  Identities=11%  Similarity=0.053  Sum_probs=79.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAH  209 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~  209 (300)
                      +++=++.|...-....|...+ |  .+-+.. ..+|++...+..+++ .++ ..   +...++.-+..|. .=.+++..+
T Consensus         7 aL~P~l~WGsip~v~~k~GG~-p--~qQ~lG-tT~GALifaiiv~~~-~~p-~~---T~~~~iv~~isG~-~Ws~GQ~~Q   76 (288)
T COG4975           7 ALLPALGWGSIPLVANKFGGK-P--YQQTLG-TTLGALIFAIIVFLF-VSP-EL---TLTIFIVGFISGA-FWSFGQANQ   76 (288)
T ss_pred             HHHHHHHhcccceeeeecCCC-h--hHhhhh-ccHHHHHHHHHHhee-ecC-cc---chhhHHHHHHhhh-Hhhhhhhhh
Confidence            566677888776665554332 2  333322 233444333333333 121 11   1122333333333 335788899


Q ss_pred             HHHhhhcCCceeecchh-hHHHHHHHHHHHHhcCcccchhh-h---hHHHHhhhhhhhhccch
Q 022226          210 TWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGSV-V---GATIVAFGFYSVIWGQS  267 (300)
Q Consensus       210 ~~a~~~~~~~~~s~~~~-l~Pi~a~i~~~~~l~E~~~~~~~-i---G~~lil~Gv~l~~~~~~  267 (300)
                      .++++..|.+++.++.. .+.+-+.++|++.++|..+..++ +   ..++++.|+++..++++
T Consensus        77 fka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          77 FKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            99999999999999865 67788899999999999877754 3   45778899988775444

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.91  E-value=0.0086  Score=53.76  Aligned_cols=125  Identities=15%  Similarity=0.238  Sum_probs=83.5

Q ss_pred             ccccchh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHH
Q 022226          123 CDFVQGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFF  200 (300)
Q Consensus       123 ~~~~~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~  200 (300)
                      +++..|.  .+.+.+..+...++.||-.+|...    ..              .-.+..+..+.  -...|    +.|++
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~--------------~ra~~gg~~yl--~~~~W----w~G~l   72 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SG--------------LRAGEGGYGYL--KEPLW----WAGML   72 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hc--------------ccccCCCcchh--hhHHH----HHHHH
Confidence            4566777  777777777777777765444211    00              00001111111  11123    33455


Q ss_pred             HHHHHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhh
Q 022226          201 AVALRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  271 (300)
Q Consensus       201 ~t~~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~  271 (300)
                      ..++|-..-+.++...+++-++++..+.-+.+.+++..+++|+++....+|+++.+.|-++...-..++++
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~  143 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE  143 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence            55666666667777789999999999999999999999999999999999999999887766543333333

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.66  E-value=0.017  Score=52.44  Aligned_cols=123  Identities=14%  Similarity=0.159  Sum_probs=89.1

Q ss_pred             HHHHHHHh--hcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 022226          142 IVQTSIIR--EYPEELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPV  219 (300)
Q Consensus       142 v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~  219 (300)
                      +.+|++.+  +.+-|...+...+..+.+.....-. ....+ .-+..+...|..++-+|+ ...++..+-+.++++.+.+
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~-~~~~~~~~~~~~llpl~~-~~~~~~v~~n~Sl~~v~Vs  110 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKV-LKLVP-PSKISSKLPLRTLLPLGL-VFCISHVLGNVSLSYVPVS  110 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCC-CCccccccchHHHHHHHH-HHHHHHHhcchhhhccchh
Confidence            34566666  5555677777766666655554433 22221 111113345777777776 4567788889999999999


Q ss_pred             eeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          220 YVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       220 ~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      .+-+.-.++|+++.++++++.+|+.+.........++.|+.+....+.
T Consensus       111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~  158 (316)
T KOG1441|consen  111 FYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL  158 (316)
T ss_pred             HHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc
Confidence            999999999999999999999999999888888888888877766544

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.03  E-value=0.042  Score=50.43  Aligned_cols=66  Identities=14%  Similarity=0.196  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhh
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEE  269 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~  269 (300)
                      ++.+.++.++.+...+...++....-.|+..++.++.+|++++...++..+-++|+++++..++++
T Consensus       171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            456788889999999999999999999999999999999999999999999999999999876665

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.12  E-value=0.059  Score=45.20  Aligned_cols=66  Identities=17%  Similarity=0.201  Sum_probs=60.1

Q ss_pred             HHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhh
Q 022226          205 RSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEE  270 (300)
Q Consensus       205 ~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~  270 (300)
                      +-++|..+++++.++.++.+..-.-.|..+++++.+++++....++..++.+.|++...+.++..+
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence            356889999999999999999999999999999999999999999999999999998887665544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=92.99  E-value=0.31  Score=44.58  Aligned_cols=60  Identities=17%  Similarity=0.065  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      +.-.+++.+..+.+|+.-.+...+....+.+++.++++++++..+|....+...|+.+++
T Consensus       104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen  104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            344578889999999999999999999999999999999999999999999999999988

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.85  E-value=0.46  Score=41.10  Aligned_cols=131  Identities=15%  Similarity=0.159  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHhh-cC--c--------hhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHH
Q 022226          135 FFLSLLYIVQTSIIRE-YP--E--------ELMATFICCVFVTIQSTVVALIAERNPNSWRLKPDTELIAIGCSAFFAVA  203 (300)
Q Consensus       135 ~~~a~~~v~~~~~~~~-~~--~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~t~  203 (300)
                      +||=.|.+.+.|+.+. +.  +        .+.+.+.+|....+..=++..+...  ...+  ....|..... + .+..
T Consensus        23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~--~~~D--~t~~~~YaAc-s-~sYL   96 (337)
T KOG1580|consen   23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKK--TEID--NTPTKMYAAC-S-ASYL   96 (337)
T ss_pred             heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccc--cccc--CCcchHHHHH-H-HHHH
Confidence            4666777888777542 32  1        2445667777776655433332221  1111  1223333321 1 2556


Q ss_pred             HHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccchhhhh
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEK  271 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~~~~~  271 (300)
                      +++..-+.|++..+=-..-.--...|+=.+++|+++.+...++.......+|+.|+.+..++++|..-
T Consensus        97 lAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g  164 (337)
T KOG1580|consen   97 LAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGG  164 (337)
T ss_pred             HHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCC
Confidence            67777788888877555555566788889999999999999999999999999999999987665543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=89.91  E-value=1.1  Score=34.49  Aligned_cols=97  Identities=13%  Similarity=0.052  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Q 022226           11 VAVECLEVGSSTLNKAAMNKGTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLIS-CCVQTCLY   89 (300)
Q Consensus        11 ~~~~~~w~~~~~~~K~~~~~~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g-~~~~~~~~   89 (300)
                      +++.++||.+.++.|.+... .++..-.. | ...-.. .+.      +       ++    +. ..++.. -.+...|+
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~-~~~~~~-~Ll------~-------n~----~y-~ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-Q-LLQEIK-FLL------L-------NP----KY-IIPFLLNQSGSVLFF   59 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-H-HHHHHH-HHH------H-------hH----HH-HHHHHHHHHHHHHHH
Confidence            46789999999999999765 44443332 4 222222 110      1       11    11 223333 57777889


Q ss_pred             HhccccChhhHhhhh-hhhHHHHHHHHHHHhccC--ccccchh
Q 022226           90 VGIGYSSPTLSSAIV-DLTPAFTFILALISRGID--CDFVQGA  129 (300)
Q Consensus        90 ~al~~~~~~~a~~i~-~l~Pi~~~ila~~~l~e~--~~~~~G~  129 (300)
                      +.+...+.+.+.-+. +++=++|.+.++++.+|.  .+...|.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~  102 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGM  102 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHH
Confidence            999999999999885 677788888887765555  2234666

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=86.75  E-value=4.1  Score=35.98  Aligned_cols=120  Identities=13%  Similarity=0.170  Sum_probs=61.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCC-CcccccCch-----hHHHHHHHHHHHHH
Q 022226          130 STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVVALIAERNP-NSWRLKPDT-----ELIAIGCSAFFAVA  203 (300)
Q Consensus       130 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~-----~~~~l~~~~i~~t~  203 (300)
                      +++|+++|+...+=.||.... ++ +....+.+....+...++..+.+.+. ..|......     ....+-..=.++-+
T Consensus         5 ~~va~~~fGs~~vPvK~~~~g-Dg-~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~iGLg   82 (254)
T PF07857_consen    5 CIVAVLFFGSNFVPVKKFDTG-DG-FFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKTIGLG   82 (254)
T ss_pred             HHHHHHHhcccceeeEeccCC-Cc-HHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhhhhhH
Confidence            577888888887766765433 33 66666666555554444444433221 111111100     01112222223445


Q ss_pred             HHHHHHHHHhhhcCCceeecchhhHHHHHHHHHHH-HhcCcc-----cchhhhhHHHHhhhhhhhhccc
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKPLGIVFAIIMGVT-LLGDTL-----YLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~l~Pi~a~i~~~~-~l~E~~-----~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      +++.+|.               ...-+.+-..|.+ ++|++.     .....+|.++++.|..+...-|
T Consensus        83 lg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik  136 (254)
T PF07857_consen   83 LGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK  136 (254)
T ss_pred             HHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence            5666665               1233444444433 454432     4568899999998888776544

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.67  E-value=10  Score=34.37  Aligned_cols=139  Identities=13%  Similarity=-0.001  Sum_probs=93.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCC-CCCHHHHHHHHHH
Q 022226            4 VGVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRN----RTRP-PLTVSIICKIFGL   77 (300)
Q Consensus         4 ~~~~~~l~~~~~~w~~~~~~~K~~~~~-~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~----~~~~-~~~~~~~~~~~~~   77 (300)
                      ..++.+++..++.-+......|...+. +.+-+.++++-.+++.+. +....++....    ...+ ..+..-+..+.+.
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~-l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS  234 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPP-LLILSFITGELDALSLNFDNWSDSSVLVVMLLS  234 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHH-HHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence            456888888889889999999998766 578889999999998887 66655443321    0001 1122335667777


Q ss_pred             HHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccCccccchh--hhHHHHHHHHHHHHH
Q 022226           78 GLISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGIDCDFVQGA--STSGSFFLSLLYIVQ  144 (300)
Q Consensus        78 gl~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~~~~~~G~--~l~a~~~~a~~~v~~  144 (300)
                      |++|++-.++-++..+..++..-++.. .-=.+..-++.+++++++....|.  .+++.++-..|....
T Consensus       235 cv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  235 CVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            888877777778888888888777777 444555566666666664444555  555555555565443

>PRK02237 hypothetical protein; Provisional

Probab=85.15  E-value=2.8  Score=31.71  Aligned_cols=46  Identities=13%  Similarity=0.135  Sum_probs=39.6

Q ss_pred             ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          222 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       222 s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      +.+.-...+.++++++..-|++|+.+.++|.++.+.|+.++...++
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4556677888999999999999999999999999999988766543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=84.63  E-value=6.6  Score=28.83  Aligned_cols=42  Identities=7%  Similarity=-0.062  Sum_probs=26.7

Q ss_pred             HHHHHHHHHhccccChhhH-hhhhhhhHHHHHHHHHHHhccCc
Q 022226           82 CCVQTCLYVGIGYSSPTLS-SAIVDLTPAFTFILALISRGIDC  123 (300)
Q Consensus        82 ~~~~~~~~~al~~~~~~~a-~~i~~l~Pi~~~ila~~~l~e~~  123 (300)
                      ....+++..++++.+.+.+ ++...+..+.+.+.+.++++|+-
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~   82 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL   82 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            5777899999999999998 45567999999999999999993

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=84.48  E-value=18  Score=28.74  Aligned_cols=106  Identities=14%  Similarity=0.070  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 022226            8 AVMVAVECLEVGSSTLNKAAMNKGT-SDFVLIVYSNAFAAIFILLPSTFIYYRNRTRPPLTVSIICKIFGLGLISCCVQT   86 (300)
Q Consensus         8 ~~l~~~~~~w~~~~~~~K~~~~~~~-~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~   86 (300)
                      +..+.+..+-+....+.-...+. . +|+.-++.-+..+.+. +..+....+++.. +..+ +.-++...-|++|.....
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~-~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG~~~V~   79 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFIL-LLIILLITGRPSL-ASLS-SVPWWAYLGGLLGVFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHH-HHHHHHHhccccc-chhc-cCChHHhccHHHHHHHHH
Confidence            34445555555555555444444 4 4999999999999998 7776666554311 2111 112455557888888888


Q ss_pred             HHHHhccccChhhHhhhhh-hhHHHHHHHHHH
Q 022226           87 CLYVGIGYSSPTLSSAIVD-LTPAFTFILALI  117 (300)
Q Consensus        87 ~~~~al~~~~~~~a~~i~~-l~Pi~~~ila~~  117 (300)
                      +..+.+...+++.+..+.- -+-+...+++.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f  111 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHF  111 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            8888999999888886654 455677777775

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=83.02  E-value=3.1  Score=31.37  Aligned_cols=60  Identities=18%  Similarity=0.177  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhhhcCCceeecchh-hHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          204 LRSLAHTWACHKKGPVYVSMYKP-LGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       204 ~~~~l~~~a~~~~~~~~~s~~~~-l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      -+-.+|+..+.+.+-+.+.++.+ +.-.++.++|..+..|...-..+.|..+++.|+.+..
T Consensus        64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            34567888899999999888765 5677888999976666677889999999999998753

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=82.65  E-value=6.9  Score=35.92  Aligned_cols=136  Identities=15%  Similarity=0.102  Sum_probs=75.0

Q ss_pred             chh--hhHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH-HHHhcCCCC-cccccCchhHHHHHHHHHHHH
Q 022226          127 QGA--STSGSFFLSLLYIVQTSIIREYPEELMATFICCVFVTIQSTVV-ALIAERNPN-SWRLKPDTELIAIGCSAFFAV  202 (300)
Q Consensus       127 ~G~--~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~t  202 (300)
                      +|.  ..+++++.+.+++=.||. |+.+- .+.=..+.+++-++.-.+ +++.-++.. -....+...+......|+ -=
T Consensus         7 ~Gii~h~iGg~~~~sfy~P~kkv-k~WsW-Es~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~-lW   83 (344)
T PF06379_consen    7 LGIIFHAIGGFASGSFYVPFKKV-KGWSW-ESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV-LW   83 (344)
T ss_pred             HHHHHHHHHHHHhhhhccchhhc-CCccH-HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH-HH
Confidence            566  677778878777666664 55543 333334555554443322 222222221 111112234444444444 34


Q ss_pred             HHHHHHHHHHhhhcCCcee-ecchhhHHHHHHHHHHHHhcC-------cccchhhhhHHHHhhhhhhhhcc
Q 022226          203 ALRSLAHTWACHKKGPVYV-SMYKPLGIVFAIIMGVTLLGD-------TLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       203 ~~~~~l~~~a~~~~~~~~~-s~~~~l~Pi~a~i~~~~~l~E-------~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      +++-..|-.++|++|.+-. ++..=+.-+++.++.-++.|+       +-....++|.++.+.|+.+.-+.
T Consensus        84 GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   84 GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            5677788899999997653 333334444555554444332       22346788999999999988764

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=81.73  E-value=2  Score=32.43  Aligned_cols=46  Identities=20%  Similarity=0.229  Sum_probs=39.3

Q ss_pred             ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccch
Q 022226          222 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQS  267 (300)
Q Consensus       222 s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~~  267 (300)
                      +.+.-...+.++++++..-+++|+.+.++|..+.+.|+.++...++
T Consensus        61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            3455567788999999999999999999999999999998876554

; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=80.65  E-value=40  Score=30.54  Aligned_cols=135  Identities=14%  Similarity=0.101  Sum_probs=92.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCHHHHHHHHHHHH
Q 022226            5 GVTAVMVAVECLEVGSSTLNKAAMNK-GTSDFVLIVYSNAFAAIFILLPSTFIYYRNRTR----PPLTVSIICKIFGLGL   79 (300)
Q Consensus         5 ~~~~~l~~~~~~w~~~~~~~K~~~~~-~~~p~~~~~~R~~~a~l~~ll~~~~~~~~~~~~----~~~~~~~~~~~~~~gl   79 (300)
                      .++.++....+.=|++...=+....+ +++++.+++.-.++.++. -..- .+.....+.    -+.|.+-+.-+++...
T Consensus       172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~-~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAIL-NGTY-LILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHH-HHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            45555555555555554444444333 689999988888887765 3332 221121110    1345666778888899


Q ss_pred             HHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhccC--ccccchh-hhHHHHHHHHHH
Q 022226           80 ISCCVQTCLYVGIGYSSPTLSSAIVDLTPAFTFILALISRGID--CDFVQGA-STSGSFFLSLLY  141 (300)
Q Consensus        80 ~g~~~~~~~~~al~~~~~~~a~~i~~l~Pi~~~ila~~~l~e~--~~~~~G~-~l~a~~~~a~~~  141 (300)
                      +|+.+|.+-|+-++.-++-.-+.|+-+-=+++.+++.+.++.+  ..+..|. ...+++.+-.+.
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence            9999999999999998888888889999999999999999888  3444777 777777777664

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=80.37  E-value=6.5  Score=35.55  Aligned_cols=122  Identities=14%  Similarity=0.165  Sum_probs=81.1

Q ss_pred             HHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhcCC-CC-cccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcee
Q 022226          144 QTSIIREYPEELMATFICCVFVTIQSTVVALIAERN-PN-SWRLKPDTELIAIGCSAFFAVALRSLAHTWACHKKGPVYV  221 (300)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~i~~t~~~~~l~~~a~~~~~~~~~  221 (300)
                      ++...++++-|+.++.+...+=..+....-...+.. +. .....+....-.+.-.++ +++.--.+-++++++.+.+.-
T Consensus        35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence            455556666566666665544433333322222221 11 000001111222333443 677778889999999999999


Q ss_pred             ecchhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          222 SMYKPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       222 s~~~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      .+.-.-.++|-.++|.++-=|++++.-..-..+|-+|+.+.+++.
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            999999999999999999999999999988889999999887754

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=80.13  E-value=1.6  Score=32.85  Aligned_cols=31  Identities=16%  Similarity=0.156  Sum_probs=27.6

Q ss_pred             HHHHHHHhcCcccchhhhhHHHHhhhhhhhh
Q 022226          233 IIMGVTLLGDTLYLGSVVGATIVAFGFYSVI  263 (300)
Q Consensus       233 ~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~  263 (300)
                      ..+++++++|++++....|..+++++++.+.
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            5678999999999999999999999988653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	300
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 52/348 (14%), Positives = 92/348 (26%), Gaps = 151/348 (43%)

Query: 52  PS----TFIYYRNRTR------PPLTVSIICKIFGLGLISCCVQTCL-------YV---- 90
           PS     +I  R+R            VS +     L       +  L        V    
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL-------RQALLELRPAKNVLIDG 157

Query: 91  --GIGYSSPTLSSAIV---DLTPAFTF------------------ILALISRGIDCDFVQ 127
             G G +   ++  +     +     F                  +L  +   ID ++  
Sbjct: 158 VLGSGKT--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 128 GASTSGSFFLS-------LLYIVQTSIIREYPEELM-----------ATF-ICC-VFVTI 167
            +  S +  L        L  ++++   + Y   L+             F + C + +T 
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKS---KPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 168 QSTVVA--LIAER------NPNSWRLKPD--TELIA--IGCS----------------AF 199
           +   V   L A        + +S  L PD    L+   + C                 + 
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 200 FAVALRSLAHTW------ACHKKGPV------------YVSMYKPLGIVF---AIIMGVT 238
            A ++R    TW       C K   +            Y  M+  L + F   A I  + 
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSAHIPTIL 391

Query: 239 LLGDTLYLGSVVGATIVAFGFYSVIWGQSEEEKMIDDKDI-DSLKSSS 285
           L                     S+IW    +    D   + + L   S
Sbjct: 392 L---------------------SLIWFDVIKS---DVMVVVNKLHKYS 415

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	300
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.19
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.72
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.74
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.39

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.19  E-value=1.6e-11  Score=96.80  Aligned_cols=71  Identities=11%  Similarity=0.125  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCceeecc-hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhccc
Q 022226          196 CSAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWGQ  266 (300)
Q Consensus       196 ~~~i~~t~~~~~l~~~a~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~~  266 (300)
                      .+++++++++|++|++++++.+++++.++ ..+.|+++.++|++++||++++.+++|+++|+.|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35677899999999999999999999999 899999999999999999999999999999999999988644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.72  E-value=1.9e-08  Score=76.29  Aligned_cols=70  Identities=11%  Similarity=0.125  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCceeecc-hhhHHHHHHHHHHHHhcCcccchhhhhHHHHhhhhhhhhcc
Q 022226          196 CSAFFAVALRSLAHTWACHKKGPVYVSMY-KPLGIVFAIIMGVTLLGDTLYLGSVVGATIVAFGFYSVIWG  265 (300)
Q Consensus       196 ~~~i~~t~~~~~l~~~a~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~~~~~~iG~~lil~Gv~l~~~~  265 (300)
                      ..++++.+++|+++.+++|+.|.+.+.++ ..+.|+++.+.|++++||++|..+++|..+++.|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            35667889999999999999999999988 89999999999999999999999999999999999988754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.74  E-value=0.0042  Score=48.44  Aligned_cols=54  Identities=17%  Similarity=0.110  Sum_probs=39.4

Q ss_pred             HHHHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhccC--ccccchh
Q 022226           76 GLGLIS-CCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRGID--CDFVQGA  129 (300)
Q Consensus        76 ~~gl~g-~~~~~~~~~al~~~~~~~a~~i-~~l~Pi~~~ila~~~l~e~--~~~~~G~  129 (300)
                      +.|++. .+.++++..++++.+++.+..+ .++.|+++.++++++++|+  .....|.
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi   91 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGM   91 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            566666 7889999999999999999988 8999999999999999999  3344666

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.39  E-value=0.022  Score=42.53  Aligned_cols=54  Identities=19%  Similarity=0.143  Sum_probs=45.8

Q ss_pred             HHHHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhccCcc--ccchh
Q 022226           76 GLGLIS-CCVQTCLYVGIGYSSPTLSSAI-VDLTPAFTFILALISRGIDCD--FVQGA  129 (300)
Q Consensus        76 ~~gl~g-~~~~~~~~~al~~~~~~~a~~i-~~l~Pi~~~ila~~~l~e~~~--~~~G~  129 (300)
                      +.++++ .+.+.++..++++.+.+.+..+ ..+.|+++.++++++++|+.+  ...|.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi   91 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGM   91 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            455666 7888899999999999999888 799999999999999999943  34566

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00