Citrus Sinensis ID: 022349

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLDS
cccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccEEEccccEEEEEccccEEcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHcccEEEEEEcccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHcccccccEEcccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccEcccccEEEEEEccEEEcccccccEEHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEEcccEcHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHHHHHHHHccccccEEEcccccHHHHHcccccccccccEEEEEEEEccccccHHHHHHHHHHHHcc
MAPYGILIWAVITAVLASILILASHVhnarrnrttsvaffhpntndggggeRVLWCAVKAIqeespdldcivytgdhdafpdSLLARAVDRFgvellhppkvVHLYRRKwieestyprftmigqsfGSVYLSWEALckftplyyfdtsgyaftyplarIFGCRVIcythyptislDMISRVregssmynnnasiaqsnwlsQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLwgipdrikrvyppcdtsglqvlplersteypaiISVAQFRPEKVRYKLISTRYYSYLDS
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFfhpntndgggGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFgvellhppkvvhLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIisvaqfrpekvryKLISTRYYSYLDS
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLDS
***YGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL**
MAPYGILIWAVITAVLASILILASH******NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNN*ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDT***************AIISVAQFRPEKVRYKLISTRYYSYLD*
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLDS
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLDS
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query298 2.2.26 [Sep-21-2011]
Q9XEE9 463 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.942 0.606 0.748 1e-126
Q2TAA5 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.919 0.556 0.460 6e-68
Q6P312 487 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.848 0.519 0.484 7e-68
Q5R7Z6 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.919 0.556 0.460 7e-68
Q3TZM9 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.932 0.565 0.444 1e-67
Q08B22 486 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.822 0.504 0.495 1e-67
Q7ZW24 500 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.946 0.564 0.438 1e-65
Q54DM9 505 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.825 0.487 0.482 8e-62
P53993 470 Uncharacterized glycosylt yes no 0.875 0.555 0.4 5e-53
Q8X092 556 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.872 0.467 0.389 3e-50
>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 Back     alignment and function desciption
 Score =  450 bits (1158), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/282 (74%), Positives = 239/282 (84%), Gaps = 1/282 (0%)

Query: 1   MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
           MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1   MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query: 61  IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
           IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct: 60  IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
           MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
           VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
            IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEK
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEK 281
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1
>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 Back     alignment and function description
>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 Back     alignment and function description
>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 Back     alignment and function description
>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 Back     alignment and function description
>sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
224119626 466 predicted protein [Populus trichocarpa] 0.929 0.594 0.791 1e-132
255574810 465 glycosyl transferase, putative [Ricinus 0.929 0.595 0.776 1e-130
449460937 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.929 0.598 0.772 1e-128
356520284 456 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.919 0.600 0.776 1e-126
225448485 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.929 0.598 0.755 1e-125
297823943 449 glycosyl transferase family 1 protein [A 0.926 0.614 0.746 1e-124
42569790 463 alpha-1,2-mannosyltransferase [Arabidops 0.942 0.606 0.748 1e-124
297789912 463 glycosyl transferase family 1 protein [A 0.926 0.596 0.742 1e-123
356560288 460 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.855 0.554 0.8 1e-122
68160672 463 glycosyl transferase family 1 protein [N 0.862 0.555 0.785 1e-122
>gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/278 (79%), Positives = 249/278 (89%), Gaps = 1/278 (0%)

Query: 6   ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
           ++I++++T++L  IL + S  + N RR R  +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7   LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66

Query: 65  SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
           SPDLDC++YTGDHD+  +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67  SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126

Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
           SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+ 
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186

Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
           SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP 
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246

Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
           RIKRVYPPCDTSGLQVLPLER T  P  ISVAQFRPEK
Sbjct: 247 RIKRVYPPCDTSGLQVLPLERPTTTPIFISVAQFRPEK 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297823943|ref|XP_002879854.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297325693|gb|EFH56113.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356560288|ref|XP_003548425.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query298
TAIR|locus:2065080 463 LEW3 "LEAF WILTING 3" [Arabido 0.942 0.606 0.748 7.1e-116
UNIPROTKB|E1BUY5 491 ALG11 "Uncharacterized protein 0.835 0.507 0.523 5.6e-68
UNIPROTKB|E1B756 500 ALG11 "Uncharacterized protein 0.842 0.502 0.498 3.2e-65
UNIPROTKB|E2RR35 667 ALG11 "Uncharacterized protein 0.919 0.410 0.464 6.7e-65
UNIPROTKB|F1RMC7 492 ALG11 "Uncharacterized protein 0.919 0.556 0.471 8.5e-65
RGD|1564725 492 Alg11 "ALG11, alpha-1,2-mannos 0.932 0.565 0.448 1.1e-64
UNIPROTKB|Q2TAA5 492 ALG11 "GDP-Man:Man(3)GlcNAc(2) 0.919 0.556 0.460 7.6e-64
MGI|MGI:2142632 492 Alg11 "asparagine-linked glyco 0.932 0.565 0.444 9.7e-64
FB|FBgn0037108 475 CG11306 [Drosophila melanogast 0.922 0.578 0.461 1.2e-63
ZFIN|ZDB-GENE-030131-7282 500 alg11 "asparagine-linked glyco 0.946 0.564 0.438 2.1e-61
TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
 Identities = 211/282 (74%), Positives = 239/282 (84%)

Query:     1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
             MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct:     1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query:    61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
             IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct:    60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query:   121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
             MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct:   120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query:   181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
             VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct:   180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query:   241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
              IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEK
Sbjct:   240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEK 281
GO:0005576 "extracellular region" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=IDA
GO:0006487 "protein N-linked glycosylation" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=IMP
UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XEE9ALG11_ARATH2, ., 4, ., 1, ., 1, 3, 10.74820.94290.6069yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00120888
transferase, transferring glycosyl groups (466 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_XIV2606
SubName- Full=Putative uncharacterized protein; (424 aa)
    ••• 0.956
eugene3.00110811
hypothetical protein (413 aa)
    ••••0.942
eugene3.01460030
transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)
   •• • 0.494
gw1.XIV.1495.1
hypothetical protein (284 aa)
      • 0.403

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
PLN02949 463 PLN02949, PLN02949, transferase, transferring glyc 0.0
cd03806 419 cd03806, GT1_ALG11_like, This family is most close 1e-133
>gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  536 bits (1383), Expect = 0.0
 Identities = 212/277 (76%), Positives = 244/277 (88%)

Query: 6   ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
           ++++ ++T+++  ++ +A  V  ARR+R  +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5   LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64

Query: 66  PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
           PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65  PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124

Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
            GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184

Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
           SMYNN+ASIA+S WLS CKI+YY  F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244

Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
           IKRVYPPCDTSGLQ LPLERS + P IISVAQFRPEK
Sbjct: 245 IKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEK 281

Length = 463
>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 298
KOG1387 465 consensus Glycosyltransferase [Cell wall/membrane/ 100.0
PLN02949 463 transferase, transferring glycosyl groups 100.0
cd03806 419 GT1_ALG11_like This family is most closely related 100.0
cd03804 351 GT1_wbaZ_like This family is most closely related 99.83
cd03805 392 GT1_ALG2_like This family is most closely related 99.82
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.54
cd03818 396 GT1_ExpC_like This family is most closely related 99.48
PRK15179 694 Vi polysaccharide biosynthesis protein TviE; Provi 99.45
cd04955 363 GT1_like_6 This family is most closely related to 99.44
cd03809 365 GT1_mtfB_like This family is most closely related 99.44
KOG0853 495 consensus Glycosyltransferase [Cell wall/membrane/ 99.41
cd03796 398 GT1_PIG-A_like This family is most closely related 99.4
cd03819 355 GT1_WavL_like This family is most closely related 99.38
cd03820 348 GT1_amsD_like This family is most closely related 99.36
cd03811 353 GT1_WabH_like This family is most closely related 99.36
cd04962 371 GT1_like_5 This family is most closely related to 99.34
PRK10307 412 putative glycosyl transferase; Provisional 99.33
TIGR03088 374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 99.33
TIGR03449 405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 99.33
cd03812 358 GT1_CapH_like This family is most closely related 99.32
PRK09922 359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 99.31
TIGR02149 388 glgA_Coryne glycogen synthase, Corynebacterium fam 99.29
PLN02871 465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 99.29
cd03802 335 GT1_AviGT4_like This family is most closely relate 99.28
cd03801 374 GT1_YqgM_like This family is most closely related 99.27
cd03807 365 GT1_WbnK_like This family is most closely related 99.22
cd03795 357 GT1_like_4 This family is most closely related to 99.22
cd03822 366 GT1_ecORF704_like This family is most closely rela 99.22
cd03799 355 GT1_amsK_like This is a family of GT1 glycosyltran 99.21
PRK10125 405 putative glycosyl transferase; Provisional 99.19
cd05844 367 GT1_like_7 Glycosyltransferases catalyze the trans 99.19
cd03821 375 GT1_Bme6_like This family is most closely related 99.15
cd03800 398 GT1_Sucrose_synthase This family is most closely r 99.15
cd03823 359 GT1_ExpE7_like This family is most closely related 99.15
cd04951 360 GT1_WbdM_like This family is most closely related 99.14
TIGR02472 439 sucr_P_syn_N sucrose-phosphate synthase, putative, 99.11
cd03808 359 GT1_cap1E_like This family is most closely related 99.11
cd03794 394 GT1_wbuB_like This family is most closely related 99.11
cd03798 377 GT1_wlbH_like This family is most closely related 99.09
cd03817 374 GT1_UGDG_like This family is most closely related 99.04
cd03792 372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 99.02
cd03814 364 GT1_like_2 This family is most closely related to 99.02
cd03816 415 GT1_ALG1_like This family is most closely related 99.01
PRK00654 466 glgA glycogen synthase; Provisional 99.0
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 98.97
cd03791 476 GT1_Glycogen_synthase_DULL1_like This family is mo 98.94
PRK15427 406 colanic acid biosynthesis glycosyltransferase WcaL 98.93
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 98.87
TIGR02095 473 glgA glycogen/starch synthases, ADP-glucose type. 98.86
cd03825 365 GT1_wcfI_like This family is most closely related 98.82
TIGR02470 784 sucr_synth sucrose synthase. This model represents 98.8
PLN02316 1036 synthase/transferase 98.79
PLN02275 371 transferase, transferring glycosyl groups 98.78
PRK15484 380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 98.77
PRK15490 578 Vi polysaccharide biosynthesis protein TviE; Provi 98.77
TIGR03087 397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 98.72
PRK00726 357 murG undecaprenyldiphospho-muramoylpentapeptide be 98.7
PRK14099 485 glycogen synthase; Provisional 98.62
cd03785 350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 98.61
cd03813 475 GT1_like_3 This family is most closely related to 98.53
cd04949 372 GT1_gtfA_like This family is most closely related 98.46
cd04946 407 GT1_AmsK_like This family is most closely related 98.34
PLN00142 815 sucrose synthase 98.33
PRK14098 489 glycogen synthase; Provisional 98.32
PLN02846 462 digalactosyldiacylglycerol synthase 98.31
TIGR01133 348 murG undecaprenyldiphospho-muramoylpentapeptide be 98.29
TIGR02918 500 accessory Sec system glycosylation protein GtfA. M 98.22
PHA01630 331 putative group 1 glycosyl transferase 98.13
PHA01633 335 putative glycosyl transferase group 1 98.07
PLN02939 977 transferase, transferring glycosyl groups 98.06
PLN02501 794 digalactosyldiacylglycerol synthase 97.99
cd03793 590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 97.87
PRK13609 380 diacylglycerol glucosyltransferase; Provisional 97.74
PRK05749 425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 97.72
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 97.64
TIGR00215 385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 97.31
cd03788 460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 97.23
PRK13608 391 diacylglycerol glucosyltransferase; Provisional 97.13
PLN02605 382 monogalactosyldiacylglycerol synthase 97.13
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 97.11
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 96.98
TIGR02400 456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 96.65
cd04950 373 GT1_like_1 Glycosyltransferases catalyze the trans 96.61
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 96.22
KOG1111 426 consensus N-acetylglucosaminyltransferase complex, 96.1
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 95.87
cd03786 363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 95.34
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 95.29
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 94.77
PRK00025 380 lpxB lipid-A-disaccharide synthase; Reviewed 94.68
COG0438 381 RfaG Glycosyltransferase [Cell envelope biogenesis 93.69
TIGR03492 396 conserved hypothetical protein. This protein famil 93.37
COG1519 419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 92.09
TIGR02398 487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 91.7
TIGR00236 365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 90.88
PRK09814 333 beta-1,6-galactofuranosyltransferase; Provisional 90.05
TIGR03713 519 acc_sec_asp1 accessory Sec system protein Asp1. Th 88.28
KOG2941 444 consensus Beta-1,4-mannosyltransferase [Posttransl 88.17
PRK12446 352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 85.26
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 85.1
PF08660170 Alg14: Oligosaccharide biosynthesis protein Alg14 84.15
COG0707 357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 82.83
PF05693 633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 82.68
PF04413186 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid 81.92
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 80.99
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=4e-56  Score=405.39  Aligned_cols=252  Identities=38%  Similarity=0.702  Sum_probs=225.7

Q ss_pred             cCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecC-CCeEEEccccc
Q 022349           31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLH-PPKVVHLYRRK  109 (298)
Q Consensus        31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~-~~~~i~l~~~~  109 (298)
                      ++.-..||||||+|+.|||||||+|.+++++|+.+|++.++|||++.+++++.++++++..|++++++ .+.|+.|+.+.
T Consensus        40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~  119 (465)
T KOG1387|consen   40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRY  119 (465)
T ss_pred             hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence            34446899999999999999999999999999999999999999998899999999999999999855 45999999999


Q ss_pred             eeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccc-cccCCeEEEEeecCCcchHHhhhhhcccccc
Q 022349          110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA-RIFGCRVICYTHYPTISLDMISRVREGSSMY  188 (298)
Q Consensus       110 ~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~-~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y  188 (298)
                      +++.+.|++||+++|++|+|+++++++-++.||++|||+|++|.+|+. ++.+.|+++|+|||.+|+||+..+..+..  
T Consensus       120 lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~--  197 (465)
T KOG1387|consen  120 LVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK--  197 (465)
T ss_pred             eeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh--
Confidence            999999999999999999999999999999999999999999999964 47899999999999999999998875432  


Q ss_pred             cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCC
Q 022349          189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE  268 (298)
Q Consensus       189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~  268 (298)
                              ++++...|..|||+|..+|.+++..||.+++||+||.+||+++|+ ..+..++||||++++.++....++++
T Consensus       198 --------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~-~~~~~iVyPPC~~e~lks~~~te~~r  268 (465)
T KOG1387|consen  198 --------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQ-SNTCSIVYPPCSTEDLKSKFGTEGER  268 (465)
T ss_pred             --------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhh-ccceeEEcCCCCHHHHHHHhcccCCc
Confidence                    235666788999999999999999999999999999999999999 47889999999999887543334455


Q ss_pred             CcEEEEEcCCCCccChH-HHHHHHHHh
Q 022349          269 YPAIISVAQFRPEKVRY-KLISTRYYS  294 (298)
Q Consensus       269 ~~~iLsvgRl~p~Kn~~-l~I~~Afa~  294 (298)
                      ++-+|++|||+||||+. ++++ |+..
T Consensus       269 ~~~ll~l~Q~RPEKnH~~Lql~-Al~~  294 (465)
T KOG1387|consen  269 ENQLLSLAQFRPEKNHKILQLF-ALYL  294 (465)
T ss_pred             ceEEEEEeecCcccccHHHHHH-HHHH
Confidence            89999999999999999 6666 6543

>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query298
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 83/282 (29%)

Query: 67  DLDCIVYTGDHDAFPDSLLARA-VDRFGVELLHPPKVVHLYRRKWI----EESTYPRF-- 119
           + DC     D    P S+L++  +D     ++    V    R  W     +E    +F  
Sbjct: 32  NFDC----KDVQDMPKSILSKEEIDHI---IMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84

Query: 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179
            ++  ++  +    +   +   +    T  Y       R++    + +  Y    L    
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSM---MTRMY--IEQRDRLYNDNQV-FAKYNVSRLQPYL 138

Query: 180 RVREG--------------------SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVG 219
           ++R+                     + +    A     ++  QCK+ +  F  W+   + 
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWV----ALDVCLSYKVQCKMDFKIF--WLN--LK 190

Query: 220 SC----ADLAMVNSSWTQ------SHIEKLWGIPDRI------------KRVYPPCDTSG 257
           +C      L M+     Q      S  +    I  RI             + Y  C    
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC---- 246

Query: 258 LQVLPLERSTEYPAIISVAQFRPE-KVRYKLISTRYYSYLDS 298
           L VL    + +     +   F    K+   L++TR+    D 
Sbjct: 247 LLVL---LNVQNAKAWNA--FNLSCKI---LLTTRFKQVTDF 280

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
3fro_A 439 GLGA glycogen synthase; glycosyltransferase family 99.56
3c48_A 438 Predicted glycosyltransferases; retaining glycosyl 99.53
2r60_A 499 Glycosyl transferase, group 1; rossmann-fold; 1.80 99.53
3okp_A 394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 99.52
2iw1_A 374 Lipopolysaccharide core biosynthesis protein RFAG; 99.47
2gek_A 406 Phosphatidylinositol mannosyltransferase (PIMA); G 99.43
2iuy_A 342 Avigt4, glycosyltransferase; antibiotics, family G 99.4
2jjm_A 394 Glycosyl transferase, group 1 family protein; anth 99.38
2x6q_A 416 Trehalose-synthase TRET; biosynthetic protein; 2.2 99.38
3oy2_A 413 Glycosyltransferase B736L; rossmann fold, GDP-mann 99.35
2qzs_A 485 Glycogen synthase; glycosyl-transferase, GT-B fold 99.29
1rzu_A 485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 99.28
3s28_A 816 Sucrose synthase 1; glycosyltransferase, sucrose m 99.1
2x0d_A 413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.01
1f0k_A 364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 98.8
3vue_A 536 GBSS-I, granule-bound starch synthase 1, chloropla 98.67
3beo_A 375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 98.58
2vsy_A 568 XCC0866; transferase, glycosyl transferase, GT-B, 98.42
2hy7_A 406 Glucuronosyltransferase GUMK; glycosyltransferases 98.27
1vgv_A 384 UDP-N-acetylglucosamine 2-epimerase; structural ge 98.08
1v4v_A 376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 97.91
2xci_A 374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 97.41
1uqt_A 482 Alpha, alpha-trehalose-phosphate synthase; glycosy 97.29
3otg_A 412 CALG1; calicheamicin, TDP, structural genomics, PS 97.19
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 97.15
3t5t_A 496 Putative glycosyltransferase; GTB fold, pseudoglyc 96.57
3s2u_A 365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 96.53
3dzc_A 396 UDP-N-acetylglucosamine 2-epimerase; structural ge 96.05
2iyf_A 430 OLED, oleandomycin glycosyltransferase; antibiotic 95.06
3ot5_A 403 UDP-N-acetylglucosamine 2-epimerase; structural ge 95.03
4fzr_A 398 SSFS6; structural genomics, PSI-biology, protein s 94.0
2p6p_A 384 Glycosyl transferase; X-RAY-diffraction,urdamycina 93.32
3tsa_A 391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 89.63
3ia7_A 402 CALG4; glycosysltransferase, calicheamicin, enediy 89.38
3rsc_A 415 CALG2; TDP, enediyne, structural genomics, PSI-2, 86.2
2bfw_A 200 GLGA glycogen synthase; glycosyltransferase family 85.23
4hwg_A 385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 83.96
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
Probab=99.56  E-value=9.1e-14  Score=130.64  Aligned_cols=244  Identities=15%  Similarity=0.034  Sum_probs=133.2

Q ss_pred             CCcEEEEEcCCCC--CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccc--------eeecCCCeE
Q 022349           33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFG--------VELLHPPKV  102 (298)
Q Consensus        33 ~~~~Va~~Hp~l~--~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~--------~~l~~~~~~  102 (298)
                      ++|||+++.+.+.  ..||+|+++.+++++|++.  |++|.++|+..+...+......+- ++        ......+++
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~v   77 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL--GHEVLVFTPSHGRFQGEEIGKIRV-FGEEVQVKVSYEERGNLRI   77 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT--TCEEEEEEECTTCSCCEEEEEEEE-TTEEEEEEEEEEEETTEEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhccccc-cCcccceeeeeccCCCceE
Confidence            5899999998742  3699999999999999997  577788886532111000000000 00        001222233


Q ss_pred             EEccccceeecccCC-chhH-HHHH--HH-HHHHHHHHH--hccCCcEEEeCCCccccccc--ccccCCeEEEEeecCCc
Q 022349          103 VHLYRRKWIEESTYP-RFTM-IGQS--FG-SVYLSWEAL--CKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTI  173 (298)
Q Consensus       103 i~l~~~~~~~~~~~~-~~~l-~~~~--l~-~~~~a~~~l--~~~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~  173 (298)
                      ..+..........++ ...- ..+.  +. .+....+.+  +..+||+++.........+.  ++..+.|+|..+|....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~  157 (439)
T 3fro_A           78 YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK  157 (439)
T ss_dssp             EEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred             EEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence            333221111111111 0000 1111  11 111112222  24589988865432222221  22458899999998651


Q ss_pred             chHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC
Q 022349          174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP  252 (298)
Q Consensus       174 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPP  252 (298)
                      ..            +.. .+.....    ++...+.......+...+.+|.++++|+.+++.....++. +.++.||+++
T Consensus       158 ~~------------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng  220 (439)
T 3fro_A          158 SK------------LPA-FYFHEAG----LSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG  220 (439)
T ss_dssp             CC------------EEH-HHHHHTT----CGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred             cc------------Cch-HHhCccc----cccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence            10            000 0000000    0000000000224456678999999999999997776654 6789999999


Q ss_pred             CCCCcccccCCCC-------------C-CCCcEEEEEcCCC-CccChHHHHHHHHHhhhh
Q 022349          253 CDTSGLQVLPLER-------------S-TEYPAIISVAQFR-PEKVRYKLISTRYYSYLD  297 (298)
Q Consensus       253 vd~~~~~~~~~~~-------------~-~~~~~iLsvgRl~-p~Kn~~l~I~~Afa~~~~  297 (298)
                      +|.+.+...+...             . .++..++++||+. ++|+++.+|+ |++++.+
T Consensus       221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~-a~~~l~~  279 (439)
T 3fro_A          221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLK-AIEILSS  279 (439)
T ss_dssp             CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHH-HHHHHHT
T ss_pred             CCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHH-HHHHHHh
Confidence            9998886321000             0 1137899999999 9999999999 9998754
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query298
d2iw1a1 370 Lipopolysaccharide core biosynthesis protein RfaG 99.29
d2bisa1 437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 98.97
d1rzua_ 477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 98.62
d1uqta_ 456 Trehalose-6-phosphate synthase, OtsA {Escherichia 95.86
d2bfwa1 196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 91.49
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=1.4e-10  Score=103.03  Aligned_cols=78  Identities=13%  Similarity=0.049  Sum_probs=61.2

Q ss_pred             ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccccc--CCC---------CCCCCcEEEEEcCCCCccChHH
Q 022349          219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL--PLE---------RSTEYPAIISVAQFRPEKVRYK  286 (298)
Q Consensus       219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~--~~~---------~~~~~~~iLsvgRl~p~Kn~~l  286 (298)
                      ...++.++++|++..+.+.+.++. ..++.|++|.+|++.+...  +..         -+.++++++++||+.++|+++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~  212 (370)
T d2iw1a1         133 QGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDR  212 (370)
T ss_dssp             TTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHH
T ss_pred             hccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhh
Confidence            457899999999999999999986 5667899999998765321  110         0123578999999999999999


Q ss_pred             HHHHHHHhhhh
Q 022349          287 LISTRYYSYLD  297 (298)
Q Consensus       287 ~I~~Afa~~~~  297 (298)
                      +|+ |++++.+
T Consensus       213 li~-a~~~l~~  222 (370)
T d2iw1a1         213 SIE-ALASLPE  222 (370)
T ss_dssp             HHH-HHHTSCH
T ss_pred             hcc-ccccccc
Confidence            999 9987643
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure