Citrus Sinensis ID: 022445

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
cEEEEHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
cHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcc
MWYFLNVIFNILNkriynyfpyPYFVSVIHLLVGVVYCLVSWAvglpkrapidskLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYskkamtdmdstNIYAYISIIALFvcippaiivegpqlIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFgnkistqtgIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQtgigtviaiagvaaYSYIKAQMEEEKRQMKAA
*WYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK*************
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS****************
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM**********
MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE********
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
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MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query297 2.2.26 [Sep-21-2011]
P11869404 Triose phosphate/phosphat N/A no 0.996 0.732 0.908 1e-160
Q9ZSR7410 Triose phosphate/phosphat no no 1.0 0.724 0.895 1e-157
P21727402 Triose phosphate/phosphat N/A no 0.996 0.736 0.902 1e-156
P52177407 Triose phosphate/phosphat N/A no 1.0 0.729 0.885 1e-156
P49132407 Triose phosphate/phosphat N/A no 1.0 0.729 0.875 1e-154
P29463414 Triose phosphate/phosphat N/A no 1.0 0.717 0.875 1e-154
P49131408 Triose phosphate/phosphat N/A no 1.0 0.727 0.885 1e-154
Q9FTT3417 Triose phosphate/phosphat yes no 0.996 0.709 0.864 1e-153
P49133409 Triose phosphate/phosphat N/A no 0.996 0.723 0.851 1e-150
Q9M5A9388 Glucose-6-phosphate/phosp no no 0.939 0.719 0.440 8e-61
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function desciption
 Score =  563 bits (1452), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/296 (90%), Positives = 286/296 (96%)

Query: 1   MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 60
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL SW+VGLPKRAP+DSKLLKLL
Sbjct: 108 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLL 167

Query: 61  IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 120
           IPVAVCHA+GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF+LGQ +P+TLWLSLAPV
Sbjct: 168 IPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPV 227

Query: 121 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 180
           VIGVSMASLTELSFNW GFISAMISN+SFTYRS+YSKKAMTDMDSTNIYAYISIIALFVC
Sbjct: 228 VIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTDMDSTNIYAYISIIALFVC 287

Query: 181 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 240
           +PPAIIVEGPQL+KHG +DAI+KVG+ KFISDLFWVGMFYHLYNQLATNTLERVAPLTHA
Sbjct: 288 LPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 347

Query: 241 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKA 296
           VGNVLKRVFVIGFSI+AFGNKISTQT IGT IAIAGVA YS IKA+MEEEKRQMK+
Sbjct: 348 VGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQMKS 403
Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.
Spinacia oleracea (taxid: 3562)
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 Back     alignment and function description
>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
224125582 408 predicted protein [Populus trichocarpa] 1.0 0.727 0.922 1e-159
224077056 408 predicted protein [Populus trichocarpa] 1.0 0.727 0.922 1e-159
225443598 406 PREDICTED: triose phosphate/phosphate tr 1.0 0.731 0.915 1e-159
117291 404 RecName: Full=Triose phosphate/phosphate 0.996 0.732 0.908 1e-158
255536723 406 Triose phosphate/phosphate translocator, 1.0 0.731 0.915 1e-157
356548666 406 PREDICTED: triose phosphate/phosphate tr 0.996 0.729 0.912 1e-157
147834373 443 hypothetical protein VITISV_028555 [Viti 0.983 0.659 0.921 1e-157
356521410 429 PREDICTED: LOW QUALITY PROTEIN: triose p 0.996 0.689 0.908 1e-156
9295273 404 triose phosphate/phosphate translocator 1.0 0.735 0.895 1e-156
449433798 411 PREDICTED: triose phosphate/phosphate tr 1.0 0.722 0.902 1e-156
>gi|224125582|ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/297 (92%), Positives = 287/297 (96%)

Query: 1   MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 60
           MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCLVSWAVGLPKRAP+DS LLKLL
Sbjct: 112 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLL 171

Query: 61  IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 120
           IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQ+P+TLWLSLAPV
Sbjct: 172 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPV 231

Query: 121 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 180
           V+GVS+ASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIAL VC
Sbjct: 232 VLGVSVASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVC 291

Query: 181 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 240
           IPPAII+EGPQLIKHG SD I+KVG+ KFISDLFWVGMFYHLYNQLATNTLERVAPLTHA
Sbjct: 292 IPPAIILEGPQLIKHGFSDGIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 351

Query: 241 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQMKAA 297
           VGNVLKRVFVIGFSI+ FGNKISTQTGIGT +AIAGVA YSYIKA++EEEKRQ KAA
Sbjct: 352 VGNVLKRVFVIGFSIVIFGNKISTQTGIGTAVAIAGVATYSYIKAKLEEEKRQGKAA 408

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224077056|ref|XP_002305112.1| predicted protein [Populus trichocarpa] gi|222848076|gb|EEE85623.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225443598|ref|XP_002278829.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic [Vitis vinifera] gi|297740430|emb|CBI30612.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|117291|sp|P11869.1|TPT_SPIOL RecName: Full=Triose phosphate/phosphate translocator, chloroplastic; Short=cTPT; AltName: Full=E29; AltName: Full=p36; Flags: Precursor gi|21274|emb|CAA32016.1| unnamed protein product [Spinacia oleracea] Back     alignment and taxonomy information
>gi|255536723|ref|XP_002509428.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549327|gb|EEF50815.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548666|ref|XP_003542721.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Glycine max] Back     alignment and taxonomy information
>gi|147834373|emb|CAN65381.1| hypothetical protein VITISV_028555 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356521410|ref|XP_003529349.1| PREDICTED: LOW QUALITY PROTEIN: triose phosphate/phosphate translocator, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|9295273|gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator precursor [Mesembryanthemum crystallinum] Back     alignment and taxonomy information
>gi|449433798|ref|XP_004134684.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
TAIR|locus:2161423415 APE2 "ACCLIMATION OF PHOTOSYNT 0.983 0.703 0.859 1.2e-134
TAIR|locus:2160175388 GPT1 "glucose 6-phosphate/phos 0.939 0.719 0.423 5.7e-59
TAIR|locus:2036778388 GPT2 "glucose-6-phosphate/phos 0.939 0.719 0.423 1.5e-58
TAIR|locus:2151381417 AT5G17630 "AT5G17630" [Arabido 0.959 0.683 0.4 9.9e-55
UNIPROTKB|Q84QU8407 PPT2 "Phosphoenolpyruvate/phos 0.942 0.687 0.403 2.7e-52
UNIPROTKB|Q69VR7408 PPT1 "Phosphoenolpyruvate/phos 0.949 0.691 0.375 9.5e-50
TAIR|locus:2084203383 PPT2 "phosphoenolpyruvate (pep 0.956 0.741 0.385 2.3e-48
TAIR|locus:2145944408 CUE1 "CAB UNDEREXPRESSED 1" [A 0.942 0.686 0.355 3.4e-45
UNIPROTKB|Q5VQL3393 PPT3 "Phosphoenolpyruvate/phos 0.946 0.715 0.369 1e-43
GENEDB_PFALCIPARUM|PFE0410w342 PFE0410w "triose or hexose pho 0.878 0.763 0.352 1.1e-39
TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
 Identities = 251/292 (85%), Positives = 269/292 (92%)

Query:     1 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 60
             MWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SW+VGLPKRAPIDS LLK+L
Sbjct:   114 MWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVL 173

Query:    61 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 120
             IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI+GQ +P+TLWLSLAPV
Sbjct:   174 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPV 233

Query:   121 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC 180
             V+GV+MASLTELSFNW GFISAMISNISFTYRSI+SKKAMTDMDSTN+YAYISIIALFVC
Sbjct:   234 VLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVC 293

Query:   181 IPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 240
             IPPAIIVEGP+L+ HG +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHA
Sbjct:   294 IPPAIIVEGPKLLNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 353

Query:   241 VGNVLKRVFVIGFSILAFGNKISTQXXXXXXXXXXXXXXYSYIKAQMEEEKR 292
             VGNVLKRVFVIGFSI+ FGNKISTQ              YS IKA++EEEKR
Sbjct:   354 VGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVAMYSIIKAKIEEEKR 405
GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0015297 "antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA
GO:0015713 "phosphoglycerate transport" evidence=IDA
GO:0015717 "triose phosphate transport" evidence=IMP
GO:0035436 "triose phosphate transmembrane transport" evidence=IDA
GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA
GO:0009643 "photosynthetic acclimation" evidence=IMP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009534 "chloroplast thylakoid" evidence=IDA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0035304 "regulation of protein dephosphorylation" evidence=RCA
TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P11869TPT_SPIOLNo assigned EC number0.90870.99660.7326N/Ano
P29463TPT_SOLTUNo assigned EC number0.87541.00.7173N/Ano
P52177TPT1_BRAOBNo assigned EC number0.88551.00.7297N/Ano
P21727TPT_PEANo assigned EC number0.90200.99660.7363N/Ano
P49131TPT_FLAPRNo assigned EC number0.88551.00.7279N/Ano
P49133TPT_MAIZENo assigned EC number0.85130.99660.7237N/Ano
P49132TPT_FLATRNo assigned EC number0.87541.00.7297N/Ano
Q9FTT3TPT_ORYSJNo assigned EC number0.86480.99660.7098yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 1e-140
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 6e-68
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 5e-33
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 2e-05
TIGR00950260 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran 5e-04
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
 Score =  396 bits (1020), Expect = e-140
 Identities = 178/294 (60%), Positives = 215/294 (73%), Gaps = 3/294 (1%)

Query: 1   MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLL 60
           +WYFLNV FNI NK++ N FPYPYF ++I L VG +YCL+SW+ GLPKR  I S LLKLL
Sbjct: 9   LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLL 68

Query: 61  IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPV 120
           +PVA+ H +GHVTSNVS + VAVSFTHTIKA+EPFF+   S F LGQ+ P TLWLSL P+
Sbjct: 69  LPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPI 128

Query: 121 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALF 178
           V GV++AS TELSFNW GF+SAMISNI+F  R+I+SKKAMT   +D TN+YAYISI++LF
Sbjct: 129 VGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLF 188

Query: 179 VCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATNTLERVAPL 237
           +  PPA I EGP  + HG   AIS V + K  +      M F+H Y Q+A   L RV+PL
Sbjct: 189 LLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL 248

Query: 238 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 291
           TH+VGN +KRV VI  SIL FG KIS Q   GT IAIAGV  YS +KAQ  + K
Sbjct: 249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKPK 302

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 297
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
PLN00411358 nodulin MtN21 family protein; Provisional 100.0
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.97
PRK11689295 aromatic amino acid exporter; Provisional 99.96
PRK11272292 putative DMT superfamily transporter inner membran 99.96
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.96
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.96
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.95
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.95
PRK10532293 threonine and homoserine efflux system; Provisiona 99.95
PRK15430296 putative chloramphenical resistance permease RarD; 99.95
KOG1443349 consensus Predicted integral membrane protein [Fun 99.95
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.92
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.91
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.91
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.89
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.88
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.87
KOG1580337 consensus UDP-galactose transporter related protei 99.83
KOG1581327 consensus UDP-galactose transporter related protei 99.83
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.81
KOG4510346 consensus Permease of the drug/metabolite transpor 99.81
COG2962293 RarD Predicted permeases [General function predict 99.79
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.78
KOG3912372 consensus Predicted integral membrane protein [Gen 99.74
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.73
KOG2765416 consensus Predicted membrane protein [Function unk 99.71
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.69
KOG1582367 consensus UDP-galactose transporter related protei 99.68
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.65
KOG2766336 consensus Predicted membrane protein [Function unk 99.53
KOG4314290 consensus Predicted carbohydrate/phosphate translo 99.38
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.35
COG2510140 Predicted membrane protein [Function unknown] 99.34
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.26
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.26
PF13536113 EmrE: Multidrug resistance efflux transporter 99.25
COG2510140 Predicted membrane protein [Function unknown] 99.22
PF06800269 Sugar_transport: Sugar transport protein; InterPro 99.19
PRK15430 296 putative chloramphenical resistance permease RarD; 99.05
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.01
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.9
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.82
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.77
PLN00411 358 nodulin MtN21 family protein; Provisional 98.66
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.63
PRK10532293 threonine and homoserine efflux system; Provisiona 98.49
COG2962 293 RarD Predicted permeases [General function predict 98.48
PRK11689 295 aromatic amino acid exporter; Provisional 98.45
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.45
PRK11272 292 putative DMT superfamily transporter inner membran 98.41
PTZ00343 350 triose or hexose phosphate/phosphate translocator; 98.39
PRK11453 299 O-acetylserine/cysteine export protein; Provisiona 98.39
PRK13499345 rhamnose-proton symporter; Provisional 98.37
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 98.24
PF13536113 EmrE: Multidrug resistance efflux transporter 98.24
TIGR00817 302 tpt Tpt phosphate/phosphoenolpyruvate translocator 98.16
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.04
TIGR00776 290 RhaT RhaT L-rhamnose-proton symporter family prote 98.01
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 98.0
KOG2922335 consensus Uncharacterized conserved protein [Funct 97.94
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.85
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.83
COG0697 292 RhaT Permeases of the drug/metabolite transporter 97.8
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.79
PF08449 303 UAA: UAA transporter family; InterPro: IPR013657 T 97.77
PRK09541110 emrE multidrug efflux protein; Reviewed 97.76
PRK11431105 multidrug efflux system protein; Provisional 97.75
COG2076106 EmrE Membrane transporters of cations and cationic 97.71
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 97.63
COG2076106 EmrE Membrane transporters of cations and cationic 97.62
PF06027 334 DUF914: Eukaryotic protein of unknown function (DU 97.62
PRK09541110 emrE multidrug efflux protein; Reviewed 97.56
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.54
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.52
PRK11431105 multidrug efflux system protein; Provisional 97.51
PRK13499 345 rhamnose-proton symporter; Provisional 97.49
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 97.35
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 97.29
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 97.22
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 97.17
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 96.72
COG3238150 Uncharacterized protein conserved in bacteria [Fun 96.65
KOG4510 346 consensus Permease of the drug/metabolite transpor 96.54
PF06800269 Sugar_transport: Sugar transport protein; InterPro 96.47
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 96.31
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 96.29
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 96.25
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 96.11
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 95.66
PF07857 254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 95.45
COG3238150 Uncharacterized protein conserved in bacteria [Fun 95.35
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 94.04
KOG2765 416 consensus Predicted membrane protein [Function unk 93.44
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 92.81
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 92.58
PF06379344 RhaT: L-rhamnose-proton symport protein (RhaT); In 91.3
KOG1444 314 consensus Nucleotide-sugar transporter VRG4/SQV-7 91.27
KOG1580337 consensus UDP-galactose transporter related protei 90.98
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 90.92
KOG1581327 consensus UDP-galactose transporter related protei 90.7
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 89.86
KOG2922 335 consensus Uncharacterized conserved protein [Funct 86.95
PRK02237109 hypothetical protein; Provisional 80.5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
Probab=100.00  E-value=3.4e-40  Score=286.89  Aligned_cols=285  Identities=62%  Similarity=1.007  Sum_probs=238.3

Q ss_pred             CchhhhHHHHHHhHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022445            1 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA   80 (297)
Q Consensus         1 ~w~~~s~~~~~~~K~~~~~~~~p~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~   80 (297)
                      +||+.|...++.||+.++++++|..++++|+.++.+.+.+....+.+++++.++++++...+.|++...+..+.+.++++
T Consensus         9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~   88 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSK   88 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            59999999999999999999999999999999998776665433445556678889999999999998999999999999


Q ss_pred             chhhHHHHHHhhHHHHHHHHHHHHhCCcCChHHHHHHHHHHhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022445           81 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM  160 (297)
Q Consensus        81 ~~~~~~~~l~~~~pi~~~i~~~~~~~e~~s~~~~~~~~~~~~Gv~~~~~~~~~~~~~G~l~~l~a~~~~a~~~v~~~~~~  160 (297)
                      ++++++++++++.|+++++++++++|||++++++.+++++++|+.+...+|.+.+..|++++++|+++||.+.+..||..
T Consensus        89 ~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~  168 (302)
T TIGR00817        89 VAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAM  168 (302)
T ss_pred             ccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999987766667778899999999999999999999998


Q ss_pred             c--cCCchhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhhhhhchhHHHHHHHHHHH-HHHHHHHHHHHHhhccchh
Q 022445          161 T--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATNTLERVAPL  237 (297)
Q Consensus       161 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~  237 (297)
                      +  ++|+.+...+++..+.+.++|.....|+......++.+..........+...+..+. .....+...+..+++++|.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~  248 (302)
T TIGR00817       169 TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL  248 (302)
T ss_pred             ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence            7  899999999999999999999887766433221111110000111112222333333 3444556777899999999


Q ss_pred             HHhHHhhhhhHHHhhhhHhhhCCcccchhhhHHHHHHHHHHHHHHhhH
Q 022445          238 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA  285 (297)
Q Consensus       238 ~~s~~~~~~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~~~~~~~~  285 (297)
                      ++++..+++|++++++|++++||++|..+++|.++++.|+.+|++.|.
T Consensus       249 t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999986543

specificities overlap.
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK02237 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.6
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.47
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.43
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.11
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
Probab=98.60  E-value=3.9e-07  Score=65.72  Aligned_cols=71  Identities=15%  Similarity=0.211  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHhhhhhcccchhhHHHHH-HhhHHHHHHHHHHHHhCCcCChHHHHHHHHHHhhhheeeccc
Q 022445           61 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE  131 (297)
Q Consensus        61 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~i~~~~~~~e~~s~~~~~~~~~~~~Gv~~~~~~~  131 (297)
                      ....+++.....+...++++.|.+.+..+ .+..|+++.+.+++++||++++.++.|+.+++.|++.....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45455678888999999999999999888 899999999999999999999999999999999999876544
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00