Citrus Sinensis ID: 022459


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
cHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHcccccccEEEccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHccccHHHHHHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHccccHHEEEEEHHHccccccccccccccHHHHHHHHHHHccccEEcccccHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHcccHEEEcccHHHHHHHcHHHHHHHHHHHHHHHHcc
mgdiakdlfsgtvggaaqlicghpfdTIKVKlqsqpaplpgqppkyagaMDAVKQTIAaegprglykgmgapLATVAAFNALLFTVRGQMEALlrsqpgapltvnqqiicgaGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLrsegglrglfkglvptmarevpgnaamFGVYELVKQYmaggqdtsqlgRGAVLLAGglsgacfwfsvyptdvvksviqvddyknpkfsgsIDAFKKILKSegvkglykgftpamarsvpanAACFLAYEVTRSSLG
MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRvlrsegglrglfkglvpTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQlgrgavllagglsgaCFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
******DLFSGTVGGAAQLICGHPFDTIKVKL*********************KQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEV******
**DIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQP********KYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRS*PGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRL*******************GPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVK**************GAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDY**PKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
*GDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGS******VKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
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MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query297 2.2.26 [Sep-21-2011]
Q93XM7300 Mitochondrial carnitine/a yes no 1.0 0.99 0.766 1e-132
Q54FE6285 Mitochondrial substrate c yes no 0.922 0.961 0.425 1e-56
Q27257312 Protein dif-1 OS=Caenorha yes no 0.973 0.926 0.400 3e-54
Q54BM3300 Mitochondrial substrate c no no 0.925 0.916 0.406 3e-53
Q8HXY2301 Mitochondrial carnitine/a N/A no 0.942 0.930 0.408 1e-50
O43772301 Mitochondrial carnitine/a yes no 0.942 0.930 0.402 8e-50
P97521301 Mitochondrial carnitine/a yes no 0.922 0.910 0.403 4e-49
Q9Z2Z6301 Mitochondrial carnitine/a yes no 0.942 0.930 0.395 7e-49
Q9VQG4306 Congested-like trachea pr yes no 0.925 0.898 0.384 4e-47
Q9Y619301 Mitochondrial ornithine t no no 0.936 0.923 0.392 2e-46
>sp|Q93XM7|MCAT_ARATH Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1 Back     alignment and function desciption
 Score =  471 bits (1213), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/300 (76%), Positives = 261/300 (87%), Gaps = 3/300 (1%)

Query: 1   MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAE 60
           M D  KDL SGTVGGAAQL+ GHPFDTIKVKLQSQP P PGQ P+Y GA+DAVKQT+A+E
Sbjct: 1   MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASE 60

Query: 61  GPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSF 120
           G +GLYKGMGAPLATVAAFNA+LFTVRGQME LLRS+ G PLT++QQ + GAGAG AVSF
Sbjct: 61  GTKGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSF 120

Query: 121 LACPTELIKCRLQAQSALAG---SGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPT 177
           LACPTELIKCRLQAQ ALAG   +  V  AVKYGGP+DVA+ VLRSEGG RGLFKGL PT
Sbjct: 121 LACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPT 180

Query: 178 MAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSV 237
            AREVPGNA MF  YE  K+++AGG DTS LG+G++++AGG++GA FW  VYPTDVVKSV
Sbjct: 181 FAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVYPTDVVKSV 240

Query: 238 IQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 297
           +QVDDYKNP+++GS+DAF+KILKSEGVKGLYKGF PAMARSVPANAACFLAYE+TRSSLG
Sbjct: 241 LQVDDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300




May transport carnitine or acylcarnitine from the cytosol to the mitochondrial matrix as an alternative or a complement to the succinate-producing glyoxylate cycle. Involved in the transition from the embryonic stage to the juvenile autotrophic stage.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54FE6|MCFS_DICDI Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1 Back     alignment and function description
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function description
>sp|Q54BM3|MCFG_DICDI Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1 Back     alignment and function description
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1 Back     alignment and function description
>sp|O43772|MCAT_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1 Back     alignment and function description
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function description
>sp|Q9Y619|ORNT1_HUMAN Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
255557583297 Protein dif-1, putative [Ricinus communi 1.0 1.0 0.855 1e-146
449462011297 PREDICTED: mitochondrial carnitine/acylc 1.0 1.0 0.845 1e-145
356531405297 PREDICTED: mitochondrial carnitine/acylc 1.0 1.0 0.831 1e-143
388518709297 unknown [Lotus japonicus] 1.0 1.0 0.831 1e-142
363807518297 uncharacterized protein LOC100781634 [Gl 1.0 1.0 0.828 1e-141
358248634297 uncharacterized protein LOC100791908 [Gl 1.0 1.0 0.824 1e-140
224126481297 predicted protein [Populus trichocarpa] 1.0 1.0 0.855 1e-140
357485261297 Mitochondrial carnitine/acylcarnitine ca 1.0 1.0 0.808 1e-140
358248778297 uncharacterized protein LOC100787304 [Gl 1.0 1.0 0.821 1e-139
224138112296 predicted protein [Populus trichocarpa] 0.996 1.0 0.855 1e-138
>gi|255557583|ref|XP_002519821.1| Protein dif-1, putative [Ricinus communis] gi|223540867|gb|EEF42425.1| Protein dif-1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 254/297 (85%), Positives = 279/297 (93%)

Query: 1   MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAE 60
           MGD+AKDL +GTVGGAAQLICGHPFDTIKVKLQSQ APLPGQPPKYAGAMDAV+QT+AAE
Sbjct: 1   MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQLAPLPGQPPKYAGAMDAVRQTLAAE 60

Query: 61  GPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSF 120
           GPRGLYKGMGAPLATVAAFNA+LFTVRGQMEALLRSQPGAPL+V QQI+CGAGAGVAVSF
Sbjct: 61  GPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSQPGAPLSVYQQIVCGAGAGVAVSF 120

Query: 121 LACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMAR 180
           LACPTELIKCRLQAQS LAGSG   VAVKYGGP+DVA+ VL+SEGG+RGLFKGLVPT+ R
Sbjct: 121 LACPTELIKCRLQAQSTLAGSGSAAVAVKYGGPMDVARHVLKSEGGMRGLFKGLVPTLGR 180

Query: 181 EVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQV 240
           EVPGNA MFGVYEL+KQ +AGG DTSQLGRG++++AGGL+GA FW  VYPTDVVKSV+QV
Sbjct: 181 EVPGNAIMFGVYELLKQSLAGGHDTSQLGRGSLMMAGGLAGASFWALVYPTDVVKSVLQV 240

Query: 241 DDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 297
           DDYKNPK++GSI+AF+KIL SEG KGLYKGF PAMARS+PANAACFLAYEVTRSSLG
Sbjct: 241 DDYKNPKYTGSINAFRKILASEGAKGLYKGFGPAMARSIPANAACFLAYEVTRSSLG 297




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462011|ref|XP_004148735.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 1 [Cucumis sativus] gi|449462013|ref|XP_004148736.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 2 [Cucumis sativus] gi|449523403|ref|XP_004168713.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 1 [Cucumis sativus] gi|449523405|ref|XP_004168714.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356531405|ref|XP_003534268.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 1 [Glycine max] gi|356531407|ref|XP_003534269.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 2 [Glycine max] gi|356531409|ref|XP_003534270.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein-like isoform 3 [Glycine max] Back     alignment and taxonomy information
>gi|388518709|gb|AFK47416.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|363807518|ref|NP_001242143.1| uncharacterized protein LOC100781634 [Glycine max] gi|255639564|gb|ACU20076.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|358248634|ref|NP_001240170.1| uncharacterized protein LOC100791908 [Glycine max] gi|255636690|gb|ACU18681.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224126481|ref|XP_002329565.1| predicted protein [Populus trichocarpa] gi|222870274|gb|EEF07405.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357485261|ref|XP_003612918.1| Mitochondrial carnitine/acylcarnitine carrier-like protein [Medicago truncatula] gi|355514253|gb|AES95876.1| Mitochondrial carnitine/acylcarnitine carrier-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|358248778|ref|NP_001240194.1| uncharacterized protein LOC100787304 [Glycine max] gi|255640648|gb|ACU20609.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224138112|ref|XP_002326521.1| predicted protein [Populus trichocarpa] gi|222833843|gb|EEE72320.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
TAIR|locus:2178590300 BOU "A BOUT DE SOUFFLE" [Arabi 1.0 0.99 0.74 1.2e-115
DICTYBASE|DDB_G0293556300 mcfG "putative mitochondrial c 0.925 0.916 0.393 5.1e-51
CGD|CAL0001851299 YMC1 [Candida albicans (taxid: 0.939 0.933 0.379 1.3e-50
DICTYBASE|DDB_G0290913285 mcfS "putative mitochondrial c 0.922 0.961 0.408 1.2e-49
ZFIN|ZDB-GENE-040426-1869300 slc25a20 "solute carrier famil 0.946 0.936 0.402 1.1e-48
WB|WBGene00000996312 dif-1 [Caenorhabditis elegans 0.959 0.913 0.372 3.7e-48
UNIPROTKB|Q27257312 dif-1 "Protein dif-1" [Caenorh 0.959 0.913 0.372 3.7e-48
UNIPROTKB|E1C175301 SLC25A20 "Uncharacterized prot 0.946 0.933 0.395 4.7e-48
UNIPROTKB|F1SKK1301 SLC25A20 "Uncharacterized prot 0.946 0.933 0.389 5.4e-47
UNIPROTKB|Q3SZA4301 SLC25A20 "Uncharacterized prot 0.946 0.933 0.382 2.3e-46
TAIR|locus:2178590 BOU "A BOUT DE SOUFFLE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
 Identities = 222/300 (74%), Positives = 246/300 (82%)

Query:     1 MGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAE 60
             M D  KDL SGTVGGAAQL+ GHPFDTIKVKLQSQP P PGQ P+Y GA+DAVKQT+A+E
Sbjct:     1 MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASE 60

Query:    61 GPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSF 120
             G +GLYKGMGAPLATVAAFNA+LFTVRGQME LLRS+ G PLT++QQ + GAGAG AVSF
Sbjct:    61 GTKGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSF 120

Query:   121 LACPTELIKCRLQAQSALAGSG---QVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPT 177
             LACPTELIKCRLQAQ ALAG+     V  AVKYGGP+DVA+ VLRSEGG RGLFKGL PT
Sbjct:   121 LACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPT 180

Query:   178 MAREVPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSV 237
              AREVPGNA MF  YE  K+++AGG DTS                 FW  VYPTDVVKSV
Sbjct:   181 FAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVYPTDVVKSV 240

Query:   238 IQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG 297
             +QVDDYKNP+++GS+DAF+KILKSEGVKGLYKGF PAMARSVPANAACFLAYE+TRSSLG
Sbjct:   241 LQVDDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300




GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS;IDA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0015822 "ornithine transport" evidence=IGI
GO:0009536 "plastid" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
DICTYBASE|DDB_G0293556 mcfG "putative mitochondrial carnitine/acylcarnitine transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0001851 YMC1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290913 mcfS "putative mitochondrial carnitine/acylcarnitine transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00000996 dif-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q27257 dif-1 "Protein dif-1" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E1C175 SLC25A20 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SKK1 SLC25A20 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q27257DIF1_CAEELNo assigned EC number0.40060.97300.9262yesno
P32331YMC1_YEASTNo assigned EC number0.37200.92920.8990yesno
Q10248YD1K_SCHPONo assigned EC number0.36820.93600.9328yesno
Q93XM7MCAT_ARATHNo assigned EC number0.76661.00.99yesno
O43772MCAT_HUMANNo assigned EC number0.40200.94270.9302yesno
Q9Z2Z6MCAT_MOUSENo assigned EC number0.39520.94270.9302yesno
P97521MCAT_RATNo assigned EC number0.40340.92250.9102yesno
Q9VQG4COLT_DROMENo assigned EC number0.38400.92590.8986yesno
Q54FE6MCFS_DICDINo assigned EC number0.42560.92250.9614yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-09
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 5e-05
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 94.6 bits (236), Expect = 1e-24
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 211 GAVLLAGGLSGACFWFSVYPTDVVKSVIQVD-DYKNPKFSGSIDAFKKILKSEGVKGLYK 269
            A LLAGG++GA      YP DVVK+ +Q      + K+ G +D FKKI K EG++GLYK
Sbjct: 6   LASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYK 65

Query: 270 GFTPAMARSVPANAACFLAYEVTRSSL 296
           G  P + R  PA A  F  YE  +  L
Sbjct: 66  GLLPNLLRVAPAAAIYFGTYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 297
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.94
KOG1519297 consensus Predicted mitochondrial carrier protein 99.93
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.93
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.9
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.9
KOG2954427 consensus Mitochondrial carrier protein [General f 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.71
KOG1519297 consensus Predicted mitochondrial carrier protein 99.69
KOG2745321 consensus Mitochondrial carrier protein [General f 99.59
KOG2954427 consensus Mitochondrial carrier protein [General f 98.74
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.3e-61  Score=379.73  Aligned_cols=284  Identities=31%  Similarity=0.487  Sum_probs=254.4

Q ss_pred             hhhHHHHhhhhHhHhHhHhcCchhHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHhcCcchhccCcchhHHHHHHHHhH
Q 022459            3 DIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNAL   82 (297)
Q Consensus         3 ~~~~~~~~g~~a~~~~~~i~~Pl~~ik~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~~~~~   82 (297)
                      ..++.+++|.++|.+++++.||+|++|+|.|++... ....+.+++.++.++.|++.||++|||+|+.|++++..++|++
T Consensus         4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~-~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgi   82 (299)
T KOG0764|consen    4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR-TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGL   82 (299)
T ss_pred             cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc-cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHH
Confidence            456778999999999999999999999999999322 2235678999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHhcCCCCC-CChHHHHHHhhHHHHHHhhhccchHHHHHHHHhhhcccCCCccccccccCChHHHHHHHH
Q 022459           83 LFTVRGQMEALLRSQPGAP-LTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVL  161 (297)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~  161 (297)
                      +|.+||..|.++.+..+.. .++..++.+++.||.++.++++|+.++|||++.+.....+      ..|++.+|++++++
T Consensus        83 YF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~------~~Y~~~f~a~rki~  156 (299)
T KOG0764|consen   83 YFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQS------TAYKGMFDALRKIY  156 (299)
T ss_pred             HHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccc------cccccHHHHHHHHH
Confidence            9999999999997655444 3788999999999999999999999999999999876544      68999999999999


Q ss_pred             hhccCccccccchhhhhhccccccchhHHHHHHHHHHHhCCCCCC---CcchhHHHHHhhHHHHHHHhhccchHHHHHHH
Q 022459          162 RSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTS---QLGRGAVLLAGGLSGACFWFSVYPTDVVKSVI  238 (297)
Q Consensus       162 ~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r~  238 (297)
                      + +||++|||+|+.|.++ .+.+.++.|..||.+|.++.+..+.+   ..+....+..+.+|.++++.+|||++|+|+||
T Consensus       157 k-~EG~rgLY~GlVP~L~-GvshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRL  234 (299)
T KOG0764|consen  157 K-EEGFRGLYKGLVPGLL-GVSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRL  234 (299)
T ss_pred             H-HHhHHHHHhhhhhHhh-hhchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            9 9999999999999999 77899999999999999885333222   23455667777799999999999999999999


Q ss_pred             hcCCCCCCCCCChHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHHHhhh
Q 022459          239 QVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL  296 (297)
Q Consensus       239 q~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~y~~~~~~~  296 (297)
                      |.++. ++.|++.+++++++++.||++|||||+.++++|.+|.+.|.|..||.++++|
T Consensus       235 Q~~~~-~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L  291 (299)
T KOG0764|consen  235 QDQSD-NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFL  291 (299)
T ss_pred             Hhccc-CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHH
Confidence            99853 7889999999999999999999999999999999999999999999999976



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-19
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-10
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 129/298 (43%), Gaps = 22/298 (7%) Query: 6 KDLFSGTVGGAAQLICGHPFDTIKVKLQ----SQPAPLPGQPPKYAGAMDAVKQTIAAEG 61 K L +GT A LI P DT KV+LQ SQ +Y G + + + EG Sbjct: 4 KFLGAGTAACIADLIT-FPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62 Query: 62 PRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFL 121 PR LY G+ A L +F ++ + ++ ++ + +++ G+ G + Sbjct: 63 PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-TKGSEHAGIGSRLLAGSTTGALAVAV 121 Query: 122 ACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMARE 181 A PT+++K R QAQ A AG G+ +Y V+ K + R EG +RGL+KG P +AR Sbjct: 122 AQPTDVVKVRFQAQ-ARAGGGR-----RYQSTVEAYKTIAREEG-IRGLWKGTSPNVARN 174 Query: 182 VPGNAAMFGVYELVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVD 241 N A Y+L+K + + C P DVVK+ Sbjct: 175 AIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGF-CTTVIASPVDVVKT----- 228 Query: 242 DYKNP---KFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 296 Y N ++ + +L+ EG + YKGF P+ R N F+ YE + +L Sbjct: 229 RYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 286
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-69
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-12
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-57
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-39
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  215 bits (549), Expect = 6e-69
 Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 15/297 (5%)

Query: 4   IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQ----PAPLPGQPPKYAGAMDAVKQTIAA 59
           +               +   P DT KV+LQ Q             +Y G +  +   +  
Sbjct: 1   MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRT 60

Query: 60  EGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVS 119
           EGPR LY G+ A L    +F ++   +   ++            +  +++ G+  G    
Sbjct: 61  EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAV 119

Query: 120 FLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMA 179
            +A PT+++K R QAQ+        G   +Y   V+  K + R EG +RGL+KG  P +A
Sbjct: 120 AVAQPTDVVKVRFQAQARA------GGGRRYQSTVEAYKTIAREEG-IRGLWKGTSPNVA 172

Query: 180 REVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQ 239
           R    N A    Y+L+K  +      +         +   +G C      P DVVK+   
Sbjct: 173 RNAIVNCAELVTYDLIKDTLLKANLMTD-DLPCHFTSAFGAGFCTTVIASPVDVVKTRYM 231

Query: 240 VDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSL 296
                  ++  +      +L+ EG +  YKGF P+  R    N   F+ YE  + +L
Sbjct: 232 NS--ALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 286


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=4.5e-58  Score=389.13  Aligned_cols=281  Identities=25%  Similarity=0.407  Sum_probs=251.1

Q ss_pred             HHHHhhhhHhHhHhHhcCchhHHHHHHhcCCCCCC----CCCCCCCCHHHHHHHHHHhcCcchhccCcchhHHHHHHHHh
Q 022459            6 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLP----GQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNA   81 (297)
Q Consensus         6 ~~~~~g~~a~~~~~~i~~Pl~~ik~~~q~~~~~~~----~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~~~~   81 (297)
                      .++++|++|++++.+++||+|++|+|+|++.....    .....+++.++++++|+++||+++||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999874321    11346889999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHhcCCCCCCChHHHHHHhhHHHHHHhhhccchHHHHHHHHhhhcccCCCccccccccCChHHHHHHHH
Q 022459           82 LLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVL  161 (297)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~i~  161 (297)
                      ++|.+||.+++.+.+... ..+....+++|++|++++.++++|+|+||+|+|++.....      ...|++.++++++++
T Consensus        83 i~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~------~~~~~~~~~~~~~i~  155 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGG------GRRYQSTVEAYKTIA  155 (303)
T ss_dssp             HTTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCC------SSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCC------CCCCCCHHHHHHHHH
Confidence            999999999999875522 4677889999999999999999999999999999864211      157899999999999


Q ss_pred             hhccCccccccchhhhhhccccccchhHHHHHHHHHHHhCCCCCCCcchhHHHHHhhHHHHHHHhhccchHHHHHHHhcC
Q 022459          162 RSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQVD  241 (297)
Q Consensus       162 ~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r~q~~  241 (297)
                      + +||++|||||+.|++++.+|+.+++|.+||.+|+.+.+... ...+....+++|++||+++.++++|+|+||+|+|.+
T Consensus       156 ~-~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~  233 (303)
T 2lck_A          156 R-EEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS  233 (303)
T ss_dssp             H-HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             H-hcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhc
Confidence            9 99999999999999999999999999999999998875432 234567789999999999999999999999999997


Q ss_pred             CCCCCCCCChHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHHHhhhC
Q 022459          242 DYKNPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVTRSSLG  297 (297)
Q Consensus       242 ~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~y~~~~~~~~  297 (297)
                      .  ...|+++++|+++++++||+++||||+.++++|.+|.++++|.+||.+|+.++
T Consensus       234 ~--~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~  287 (303)
T 2lck_A          234 A--LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM  287 (303)
T ss_dssp             C--SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             c--ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            4  35699999999999999999999999999999999999999999999998763



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 297
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-38
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-19
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-16
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  133 bits (335), Expect = 8e-38
 Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 18/294 (6%)

Query: 5   AKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLP-GQPPKYAGAMDAVKQTIAAEGPR 63
            KD  +G V  A       P + +K+ LQ Q A        +Y G +D V +    +G  
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 64  GLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQII----CGAGAGVAVS 119
             ++G  A +       AL F  + + + +            +        G  AG    
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 126

Query: 120 FLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMA 179
               P +  + RL A      + +     ++ G  +   ++ +S+G LRGL++G   ++ 
Sbjct: 127 CFVYPLDFARTRLAADVGKGAAQR-----EFTGLGNCITKIFKSDG-LRGLYQGFNVSVQ 180

Query: 180 REVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSVIQ 239
             +   AA FGVY+  K  +   ++   +      +      A      YP D V+  + 
Sbjct: 181 GIIIYRAAYFGVYDTAKGMLPDPKNVHII---VSWMIAQTVTAVAGLVSYPFDTVRRRMM 237

Query: 240 VDDYK---NPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYE 290
           +   +   +  ++G++D ++KI K EG K  +KG    + R +   A   + Y+
Sbjct: 238 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query297
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=8.9e-53  Score=353.53  Aligned_cols=280  Identities=21%  Similarity=0.357  Sum_probs=246.3

Q ss_pred             hhhHHHHhhhhHhHhHhHhcCchhHHHHHHhcCCCCC-CCCCCCCCCHHHHHHHHHHhcCcchhccCcchhHHHHHHHHh
Q 022459            3 DIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPL-PGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNA   81 (297)
Q Consensus         3 ~~~~~~~~g~~a~~~~~~i~~Pl~~ik~~~q~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~~~~   81 (297)
                      ++.+++++|++|++++.+++||||+||+|+|++.... ......+++.++++++++++||+++||+|+.+.+++..+...
T Consensus         5 ~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~   84 (292)
T d1okca_           5 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQA   84 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccc
Confidence            4678999999999999999999999999999987442 233566889999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHhcCCCCCCC----hHHHHHHhhHHHHHHhhhccchHHHHHHHHhhhcccCCCccccccccCChHHHH
Q 022459           82 LLFTVRGQMEALLRSQPGAPLT----VNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVA  157 (297)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~  157 (297)
                      ++|.+++.+++.+.+......+    ....+.+|.+|++++.++++|+|++|+|+|.+......     ...+.+..+.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~-----~~~~~~~~~~~  159 (292)
T d1okca_          85 LNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAA-----QREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTT-----TCSCSSHHHHH
T ss_pred             hhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccccc-----ccccccHHHHH
Confidence            9999999999998876543333    34567799999999999999999999999998754322     25788999999


Q ss_pred             HHHHhhccCccccccchhhhhhccccccchhHHHHHHHHHHHhCCCCCCCcchhHHHHHhhHHHHHHHhhccchHHHHHH
Q 022459          158 KRVLRSEGGLRGLFKGLVPTMAREVPGNAAMFGVYELVKQYMAGGQDTSQLGRGAVLLAGGLSGACFWFSVYPTDVVKSV  237 (297)
Q Consensus       158 ~~i~~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~t~Pld~i~~r  237 (297)
                      +++++ ++|+++||+|+.|++++++++.+++|.+||.+|+.+.+   ....+....++++.+++.++++++||+||||+|
T Consensus       160 ~~~~~-~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR  235 (292)
T d1okca_         160 TKIFK-SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD---PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRR  235 (292)
T ss_dssp             HHHHH-HHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG---GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhh-ccchhhhhccccccccceehHhhhhhhhccchhhhccc---ccccchHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence            99999 99999999999999999999999999999999987653   333466778999999999999999999999999


Q ss_pred             HhcCCCC---CCCCCChHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHH
Q 022459          238 IQVDDYK---NPKFSGSIDAFKKILKSEGVKGLYKGFTPAMARSVPANAACFLAYEVT  292 (297)
Q Consensus       238 ~q~~~~~---~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~y~~~  292 (297)
                      +|.+...   ...|.++++++++++++||+++||||+.++++|.++ .++.|.+||.+
T Consensus       236 ~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         236 MMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9998653   246889999999999999999999999999999766 68999999964



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure