Citrus Sinensis ID: 022460

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
Protein Sequence
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Secondary Structure (PSIPRED)
cccccHHcccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEcccccccccccEEEEEEccEEEEEEEEEcccHHHHHHHHHcccEEEEEccccccHHHHHHHHHcccccEEEEEEEccccccccccEEEcccccccccccEEEEEcccccEEcccccccccccccHHcccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccHHHHHHHHcccccccccccccccccccEEcccccccccccccEcccccccccccccccccccccccHHHHccccccccccccccccccccHHccccHHHHcccccccccccccccccccccccccccEEEEEEccccEEEccccccccccEEEEEEEccEEEEEEEEEcccHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHccccccEEEEEEEEccEEEEcccHHHHHHHHcccHccEEEEEccccEEEEEccccccccccccEEccccccccccccccc
Coil and Loop (DISEMBL)
mnslneifgtnesdhfsSLSAELfgksaedpvcsheeinfgtifdldlrrpchegknvgqgtcedilpidktlcnphhelfsysiqqtslldqgsnmqsclgiadeeyynpylyfmgwqnlpqiapsywprtplrepiaglpitlvldldetlvhssfdnckdadfsfpihskmevqtvfvrqrpyLHMFLEAVASMFDVVIFTAGqsiyagqlldildpnqtligqrvyrdscvfadgeylkdLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Flexible Loop (DISEMBL)
mnslneifgtnesdhFSSLSAELFGKSAEDPVCSHEEINFgtifdldlrrpCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Low Complexity Region (SEG)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Disordered region (IsUnstruct)
******************************PVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYS**
Disordered Region (DISOPRED)
*****E****************************************************************************************************EYYNPYLYF************************GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Disordered Region (DISEMBL)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Disordered Region (DISPRO)
*****EIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQT************LGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLD******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFLSYINYPPDILIIYLSFYINASLDILYSCT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	297	2.2.26 [Sep-21-2011]
Q54GB2	567	CTD small phosphatase-lik	yes	no	0.521	0.273	0.433	6e-32
Q8BG15	465	CTD small phosphatase-lik	yes	no	0.542	0.346	0.402	4e-31
Q5XIK8	465	CTD small phosphatase-lik	yes	no	0.542	0.346	0.402	4e-31
Q05D32	466	CTD small phosphatase-lik	yes	no	0.542	0.345	0.402	5e-31
Q08BB5	469	CTD small phosphatase-lik	yes	no	0.542	0.343	0.396	9e-31
Q801R4	466	CTD small phosphatase-lik	N/A	no	0.542	0.345	0.396	1e-30
Q3KQB6	466	CTD small phosphatase-lik	N/A	no	0.542	0.345	0.396	1e-30
Q5F3Z7	466	CTD small phosphatase-lik	yes	no	0.542	0.345	0.396	2e-30
A4QNX6	460	CTD small phosphatase-lik	no	no	0.535	0.345	0.395	2e-30
Q66KM5	466	CTD small phosphatase-lik	yes	no	0.542	0.345	0.396	2e-30

>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 4/159 (2%)

Query: 109 YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSF 168
           +NP+L+     N   + P      P +E  +   I+LVLDLDETLVH S +  +    +F
Sbjct: 360 FNPFLFIKQLANATTMPPPVA--LPPKEH-SSPKISLVLDLDETLVHCSTEPLEQPHLTF 416

Query: 169 PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR 228
           P+        VF ++RP+   FL  V+ +F+V+IFTA Q +YA +LL+++DPN   I  R
Sbjct: 417 PVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYR 475

Query: 229 VYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           +YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ + F
Sbjct: 476 LYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGF 514

Probable phosphatase.
Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -

>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2 PE=1 SV=1

 Score =  135 bits (339), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411

Probable phosphatase.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus GN=Ctdspl2 PE=2 SV=1

 Score =  135 bits (339), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411

Probable phosphatase.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2

 Score =  134 bits (338), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

Probable phosphatase.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a PE=2 SV=1

 Score =  134 bits (337), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 311

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 312 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 371

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 372 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAY 415

Probable phosphatase.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis GN=ctdspl2-a PE=2 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

Probable phosphatase.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis GN=ctdspl2-b PE=2 SV=1

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

Probable phosphatase.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2 PE=2 SV=2

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

Probable phosphatase.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b PE=2 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 102/162 (62%), Gaps = 3/162 (1%)

Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKDAD 165
           E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +   DA 
Sbjct: 247 EVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELDDAA 304

Query: 166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
            +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + L+
Sbjct: 305 LTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLV 364

Query: 226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
             R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 365 RHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 406

Probable phosphatase.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis GN=ctdspl2 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 3/164 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

Probable phosphatase.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
297740632	479	unnamed protein product [Vitis vinifera]	0.612	0.379	0.5	1e-46
225463384	484	PREDICTED: uncharacterized protein LOC10	0.612	0.376	0.5	1e-46
147839779	482	hypothetical protein VITISV_035567 [Viti	0.612	0.377	0.5	2e-46
255557435	474	conserved hypothetical protein [Ricinus	0.757	0.474	0.417	2e-46
224116454	377	predicted protein [Populus trichocarpa]	0.606	0.477	0.505	3e-46
148909957	517	unknown [Picea sitchensis]	0.528	0.303	0.541	1e-45
115456605	444	Os03g0850100 [Oryza sativa Japonica Grou	0.592	0.396	0.494	8e-45
218194116	444	hypothetical protein OsI_14336 [Oryza sa	0.592	0.396	0.494	9e-45
449494439	446	PREDICTED: CTD small phosphatase-like pr	0.575	0.383	0.5	1e-44
449450582	1024	PREDICTED: uncharacterized protein LOC10	0.575	0.166	0.5	1e-44

>gi|297740632|emb|CBI30814.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 124/182 (68%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    +Q S++  C      E ++P+L+     +L  +  +  P    +E      I
Sbjct: 248 AIHQMRSCNQESDINPCSDQDQAECFDPHLFIRNLPDLSDVVANSRPTILPKETRKKKSI 307

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+FP+   M+  TV+V+QRPYLH FLE VA MF++V+F
Sbjct: 308 TLVLDLDETLVHSTLEHCDDADFTFPVFFNMKDHTVYVKQRPYLHTFLERVAEMFEIVVF 367

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLDILDP+      R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 368 TASQSIYAEQLLDILDPDGKFFSHRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQ 427

Query: 264 VY 265
           V+
Sbjct: 428 VF 429

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463384|ref|XP_002271705.1| PREDICTED: uncharacterized protein LOC100258847 [Vitis vinifera]

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 124/182 (68%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    +Q S++  C      E ++P+L+     +L  +  +  P    +E      I
Sbjct: 253 AIHQMRSCNQESDINPCSDQDQAECFDPHLFIRNLPDLSDVVANSRPTILPKETRKKKSI 312

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+FP+   M+  TV+V+QRPYLH FLE VA MF++V+F
Sbjct: 313 TLVLDLDETLVHSTLEHCDDADFTFPVFFNMKDHTVYVKQRPYLHTFLERVAEMFEIVVF 372

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLDILDP+      R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 373 TASQSIYAEQLLDILDPDGKFFSHRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQ 432

Query: 264 VY 265
           V+
Sbjct: 433 VF 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147839779|emb|CAN65912.1| hypothetical protein VITISV_035567 [Vitis vinifera]

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 124/182 (68%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    +Q S++  C      E ++P+L+     +L  +  +  P    +E      I
Sbjct: 251 AIHQMRSCNQESDINPCSDQDQAECFDPHLFIRNLPDLSDVVANSRPTILPKETRKKKSI 310

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+FP+   M+  TV+V+QRPYLH FLE VA MF++V+F
Sbjct: 311 TLVLDLDETLVHSTLEHCDDADFTFPVFFNMKDHTVYVKQRPYLHTFLERVAEMFEIVVF 370

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLDILDP+      R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 371 TASQSIYAEQLLDILDPDGKFFSHRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQ 430

Query: 264 VY 265
           V+
Sbjct: 431 VF 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557435|ref|XP_002519748.1| conserved hypothetical protein [Ricinus communis] gi|223541165|gb|EEF42721.1| conserved hypothetical protein [Ricinus communis]

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 146/235 (62%), Gaps = 10/235 (4%)

Query: 65  DILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQI 124
           D+   ++ +  P +     +I Q    +  S++ +    A+E  ++P  +      L  +
Sbjct: 226 DMKSCEEGMIEPDNTSLYLAINQIRSCNHESDLNTDPDQAEE--FDPQFFIKNLPELSDV 283

Query: 125 APSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR 184
             +Y P  P +E +    +TLVLDLDETLVHS+ ++C DADF+F +   ++  TV+V++R
Sbjct: 284 ESNYHPSVPPKESLMKKSVTLVLDLDETLVHSTLEHCDDADFTFTVFFNLKEHTVYVKRR 343

Query: 185 PYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKD 244
           P+LH FLE VA +F+VVIFTA QSIYA QLLDILDP + LI +RVYR+SC+F DG Y KD
Sbjct: 344 PHLHTFLERVAELFEVVIFTASQSIYAAQLLDILDPEKKLISRRVYRESCIFTDGSYTKD 403

Query: 245 LTILGRDLARIAIVDNTPQVYLF--------LSYINYPPDILIIYLSFYINASLD 291
           LT+LG DLA++AI+DN+PQV+           S+ + P D  +I L  ++   +D
Sbjct: 404 LTVLGVDLAKVAIIDNSPQVFSLQVNNGIPIKSWFSDPSDCALISLLPFLETLVD 458

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116454|ref|XP_002317305.1| predicted protein [Populus trichocarpa] gi|222860370|gb|EEE97917.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 2/182 (1%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    DQ S++ +    A  E ++P  +      L  +  ++ P    +EP     I
Sbjct: 148 AINQIRSCDQESDLITDSDQA--EDFDPQFFIRNLPELSDVVSNFRPSISPKEPCRRKSI 205

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+F +   M+  TV+V+QRP++H FLE VA MF+VVIF
Sbjct: 206 TLVLDLDETLVHSTLEHCDDADFTFTVFFNMKEHTVYVKQRPHVHTFLERVAEMFEVVIF 265

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLD+LDP++ LI +R+YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 266 TASQSIYAAQLLDMLDPDRKLISRRIYRESCIFSDGSYTKDLTVLGVDLAKVAIIDNSPQ 325

Query: 264 VY 265
           V+
Sbjct: 326 VF 327

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148909957|gb|ABR18063.1| unknown [Picea sitchensis]

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 119/157 (75%)

Query: 111 PYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPI 170
           PYL+     +L ++  S+ P    ++     PITLVLDLDETLVHS+ ++C DADF+FP+
Sbjct: 288 PYLFIKNLPDLSEVVSSFRPMLLPKQTRRCPPITLVLDLDETLVHSTLEHCDDADFTFPV 347

Query: 171 HSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230
           H  ++  TV+VR RP+L +F++ VA MF++++FTA QS+YA QLL++LDP + LI  RVY
Sbjct: 348 HFNLKEHTVYVRCRPHLQLFMDRVADMFEIIVFTASQSVYAEQLLNVLDPKRKLIRHRVY 407

Query: 231 RDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           R+SCVF +G YLKDLTILGRDLA++AI+DN+PQ + F
Sbjct: 408 RESCVFVEGNYLKDLTILGRDLAQVAIIDNSPQAFGF 444

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115456605|ref|NP_001051903.1| Os03g0850100 [Oryza sativa Japonica Group] gi|27573336|gb|AAO20054.1| putative NLI interacting factor [Oryza sativa Japonica Group] gi|28269415|gb|AAO37958.1| putative NLI-interacting factor [Oryza sativa Japonica Group] gi|108712119|gb|ABF99914.1| NLI interacting factor, putative, expressed [Oryza sativa Japonica Group] gi|113550374|dbj|BAF13817.1| Os03g0850100 [Oryza sativa Japonica Group] gi|125588650|gb|EAZ29314.1| hypothetical protein OsJ_13375 [Oryza sativa Japonica Group]

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 6/182 (3%)

Query: 92  DQGSNMQSCLGIADEE------YYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITL 145
           +Q  +  S  G AD +      Y++PY +     +L  + P + P    ++  +    TL
Sbjct: 203 EQSQDSTSTDGCADPDETVELDYFDPYAFIKDLPDLSLVVPKFQPVLLPKQTRSCPRTTL 262

Query: 146 VLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTA 205
           VLDLDETLVHS+ + C+D+DF+FP+H  +   T++VR RPYL  FLE VASMF+++IFTA
Sbjct: 263 VLDLDETLVHSTLEPCEDSDFTFPVHFNLREHTIYVRCRPYLKEFLETVASMFEIIIFTA 322

Query: 206 GQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVY 265
            QSIYA QLL+ILDP + L   RVYR+SC+F +G YLKDL++LGRDLAR+ IVDN+PQ +
Sbjct: 323 SQSIYAEQLLNILDPKRRLFRHRVYRESCLFVEGNYLKDLSVLGRDLARVVIVDNSPQAF 382

Query: 266 LF 267
            F
Sbjct: 383 GF 384

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218194116|gb|EEC76543.1| hypothetical protein OsI_14336 [Oryza sativa Indica Group]

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 6/182 (3%)

Query: 92  DQGSNMQSCLGIADEE------YYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITL 145
           +Q  +  S  G AD +      Y++PY +     +L  + P + P    ++  +    TL
Sbjct: 203 EQSQDSTSTDGCADPDETVELDYFDPYAFIKDLPDLSLVVPKFRPVLLPKQTRSCPRTTL 262

Query: 146 VLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTA 205
           VLDLDETLVHS+ + C+D+DF+FP+H  +   T++VR RPYL  FLE VASMF+++IFTA
Sbjct: 263 VLDLDETLVHSTLEPCEDSDFTFPVHFNLREHTIYVRCRPYLKEFLETVASMFEIIIFTA 322

Query: 206 GQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVY 265
            QSIYA QLL+ILDP + L   RVYR+SC+F +G YLKDL++LGRDLAR+ IVDN+PQ +
Sbjct: 323 SQSIYAEQLLNILDPKRRLFRHRVYRESCLFVEGNYLKDLSVLGRDLARVVIVDNSPQAF 382

Query: 266 LF 267
            F
Sbjct: 383 GF 384

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494439|ref|XP_004159546.1| PREDICTED: CTD small phosphatase-like protein 2-like [Cucumis sativus]

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 5/176 (2%)

Query: 97  MQSCLGIADEEY-----YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDE 151
           M + + + D+EY     ++PY +      L  + P+Y P    ++  +  P TLVLDLDE
Sbjct: 198 MAAEVHVQDDEYEEIDDFDPYFFIKNLPALSAVVPTYRPMLLPKQTRSCPPTTLVLDLDE 257

Query: 152 TLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYA 211
           TLVHS+ + C DADF+FP++  ++  TV+VR RPYL  F+EAVA  F+++IFTA QSIYA
Sbjct: 258 TLVHSTLEPCVDADFTFPVNFNLQEHTVYVRCRPYLRDFMEAVARHFEIIIFTASQSIYA 317

Query: 212 GQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
            QLL++LDP + +   RV+R+SCVF DG YLKDL++LGRDLAR+ IVDN+PQ + F
Sbjct: 318 EQLLNVLDPKRKIFRHRVFRESCVFVDGNYLKDLSVLGRDLARVIIVDNSPQAFGF 373

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450582|ref|XP_004143041.1| PREDICTED: uncharacterized protein LOC101204959 [Cucumis sativus]

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 5/176 (2%)

Query: 97  MQSCLGIADEEY-----YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDE 151
           M + + + D+EY     ++PY +      L  + P+Y P    ++  +  P TLVLDLDE
Sbjct: 191 MAAEVHVQDDEYEEIDDFDPYFFIKNLPALSAVVPTYRPMLLPKQTRSCPPTTLVLDLDE 250

Query: 152 TLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYA 211
           TLVHS+ + C DADF+FP++  ++  TV+VR RPYL  F+EAVA  F+++IFTA QSIYA
Sbjct: 251 TLVHSTLEPCVDADFTFPVNFNLQEHTVYVRCRPYLRDFMEAVARHFEIIIFTASQSIYA 310

Query: 212 GQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
            QLL++LDP + +   RV+R+SCVF DG YLKDL++LGRDLAR+ IVDN+PQ + F
Sbjct: 311 EQLLNVLDPKRKIFRHRVFRESCVFVDGNYLKDLSVLGRDLARVIIVDNSPQAFGF 366

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	297
TAIR|locus:2170458	456	SSP4 "SCP1-like small phosphat	0.670	0.436	0.461	1.7e-43
TAIR|locus:2143019	305	SSP5 "SCP1-like small phosphat	0.784	0.763	0.403	4e-42
TAIR|locus:2117661	446	SSP4b "SCP1-like small phospha	0.531	0.354	0.534	4.6e-41
DICTYBASE|DDB_G0290365	567	ctdspl2 "CTD small phosphatase	0.535	0.280	0.441	2.7e-32
UNIPROTKB|F1SN06	405	F1SN06 "Uncharacterized protei	0.636	0.466	0.375	2e-31
UNIPROTKB|E1B8W1	466	CTDSPL2 "Uncharacterized prote	0.538	0.343	0.412	2.6e-31
UNIPROTKB|F6XTC9	466	CTDSPL2 "Uncharacterized prote	0.538	0.343	0.412	2.6e-31
UNIPROTKB|Q05D32	466	CTDSPL2 "CTD small phosphatase	0.538	0.343	0.412	2.6e-31
MGI|MGI:1196405	465	Ctdspl2 "CTD (carboxy-terminal	0.538	0.344	0.412	2.6e-31
RGD|1309219	465	Ctdspl2 "CTD (carboxy-terminal	0.538	0.344	0.412	2.6e-31

TAIR|locus:2170458 SSP4 "SCP1-like small phosphatase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 96/208 (46%), Positives = 133/208 (63%)

Query:    59 GQGTCEDILPIDKTLCNPHHELF-SYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMG 117
             G    +DI      +   +H+LF +++  ++  ++     +S   +A++  ++P L+   
Sbjct:   207 GSANKDDIKSDTDKINLDNHDLFLAFNRTRSYNVEPDDRAES--EVAED--FDPQLFIKN 262

Query:   118 WQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQ 177
                L  +  +YWPR  LR+      +TLVLDLDETLVHS+ ++C  ADFSF +   M+  
Sbjct:   263 QPELSDVVSNYWPRDTLRKK----SVTLVLDLDETLVHSTLESCNVADFSFRVFFNMQEN 318

Query:   178 TVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA 237
             TV+VRQRP+L+ FLE V  +F VVIFTA  SIYA QLLDILDP+   I QR YRDSC+  
Sbjct:   319 TVYVRQRPHLYRFLERVGELFHVVIFTASHSIYASQLLDILDPDGKFISQRFYRDSCILL 378

Query:   238 DGEYLKDLTILGRDLARIAIVDNTPQVY 265
             DG Y KDLT+LG DLA++AI+DN PQVY
Sbjct:   379 DGIYTKDLTVLGLDLAKVAIIDNCPQVY 406

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0009610 "response to symbiotic fungus" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

TAIR|locus:2143019 SSP5 "SCP1-like small phosphatase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 103/255 (40%), Positives = 156/255 (61%)

Query:    60 QGTCEDILPIDKTLCNPHHELFS----YSIQQTSLLD------QGSNMQS-CL-GIADEE 107
             Q   + +L +D +  +P+  L S    Y   ++S L+      Q S + S C+    DEE
Sbjct:    15 QNPYDRLLALDTSTVDPNCNLDSVSAIYLAMKSSKLECVDERGQDSLITSVCMEDEEDEE 74

Query:   108 Y--YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDAD 165
                ++PYL+     NL  + P++ P    ++  +  PI+LVLDLDETLVHS+ + C + D
Sbjct:    75 LDEFDPYLFIKNLPNLSSVVPTFRPVLLPKQTRSCPPISLVLDLDETLVHSTLEPCGEVD 134

Query:   166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
             F+FP++   E   V+VR RP+L  F+E V+ +F+++IFTA QSIYA QLL++LDP + L 
Sbjct:   135 FTFPVNFNEEEHMVYVRCRPHLKEFMERVSRLFEIIIFTASQSIYAEQLLNVLDPKRKLF 194

Query:   226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDI 277
               RVYRDSCVF DG YLKDL++LGRDL+R+ IVDN+PQ + F         S+ N P D 
Sbjct:   195 RHRVYRDSCVFFDGNYLKDLSVLGRDLSRVIIVDNSPQAFGFQVENGVPIESWFNDPSDK 254

Query:   278 LIIYLSFYINASLDI 292
              +++L  ++ + + +
Sbjct:   255 ELLHLLPFLESLIGV 269

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0005694 "chromosome" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2117661 SSP4b "SCP1-like small phosphatase 4b" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 86/161 (53%), Positives = 111/161 (68%)

Query:   107 EYYNPYLYFMGWQNLPQIAPSYWP--RTPLREPIAGLPITLVLDLDETLVHSSFDNCKDA 164
             E ++P ++      L  +  +Y+P  + P   P     +TLVLDLDETLVHS+ + C+D 
Sbjct:   232 EDFDPQIFLRNQPELADVVFNYFPDMQQPRDSP-KRKAVTLVLDLDETLVHSTLEVCRDT 290

Query:   165 DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTL 224
             DFSF +   M+  TV+V+QRPYL+ FLE V  +F VVIFTA  SIYA QLLDILDP+   
Sbjct:   291 DFSFRVTFNMQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKF 350

Query:   225 IGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVY 265
             + QR YRDSC+ +DG Y KDLT+LG DLA++AIVDN PQVY
Sbjct:   351 VSQRFYRDSCILSDGIYTKDLTVLGLDLAKVAIVDNCPQVY 391

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

DICTYBASE|DDB_G0290365 ctdspl2 "CTD small phosphatase-like protein 2" [Dictyostelium discoideum (taxid:44689)]

 Score = 357 (130.7 bits), Expect = 2.7e-32, P = 2.7e-32
 Identities = 72/163 (44%), Positives = 104/163 (63%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDA 164
             DEE +NP+L+     N   + P      P +E  +   I+LVLDLDETLVH S +  +  
Sbjct:   356 DEEEFNPFLFIKQLANATTMPPPV--ALPPKEH-SSPKISLVLDLDETLVHCSTEPLEQP 412

Query:   165 DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTL 224
               +FP+        VF ++RP+   FL  V+ +F+V+IFTA Q +YA +LL+++DPN   
Sbjct:   413 HLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK- 471

Query:   225 IGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
             I  R+YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ + F
Sbjct:   472 IKYRLYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGF 514

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

UNIPROTKB|F1SN06 F1SN06 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 74/197 (37%), Positives = 120/197 (60%)

Query:    75 NPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEY--YNPYLYFMGWQNLPQIAPSYWPRT 132
             +P++ L S SI      D G +        +E++  ++PY YF+  +++P +      R 
Sbjct:   159 SPYNHL-SVSIIAPVTPDSGYSSAHAEATYEEDWEVFDPY-YFI--KHVPPLTEEQLNRK 214

Query:   133 P-LREPIAGLP-ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMF 190
             P L       P  +LVLDLDETLVH S +  +DA  +FP+  +  +  V+VR RP+   F
Sbjct:   215 PALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREF 274

Query:   191 LEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGR 250
             LE ++ M+++++FTA + +YA +LL+ILDP + L+  R++R+ CV   G Y+KDL ILGR
Sbjct:   275 LERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGR 334

Query:   251 DLARIAIVDNTPQVYLF 267
             DL++  I+DN+PQ + +
Sbjct:   335 DLSKTIIIDNSPQAFAY 351

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|E1B8W1 CTDSPL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 68/165 (41%), Positives = 107/165 (64%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|F6XTC9 CTDSPL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 68/165 (41%), Positives = 107/165 (64%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q05D32 CTDSPL2 "CTD small phosphatase-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 68/165 (41%), Positives = 107/165 (64%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 412

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

MGI|MGI:1196405 Ctdspl2 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2" [Mus musculus (taxid:10090)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 68/165 (41%), Positives = 107/165 (64%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   250 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 306

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   307 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 366

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct:   367 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411

GO:0003674 "molecular_function" evidence=ND

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

RGD|1309219 Ctdspl2 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2" [Rattus norvegicus (taxid:10116)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 68/165 (41%), Positives = 107/165 (64%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   250 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 306

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   307 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 366

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLF 267
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ + +
Sbjct:   367 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAY 411

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691
3rd Layer	3.1.3.16	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	297
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	3e-49
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	4e-46
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	2e-41
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	2e-27
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	2e-15

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  160 bits (407), Expect = 3e-49
 Identities = 61/125 (48%), Positives = 90/125 (72%), Gaps = 1/125 (0%)

Query: 144 TLVLDLDETLVHSSFDNCK-DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           TLVLDLDETLVHS+F   K DADF  P+    ++  V+V +RP++  FLE V+  +++VI
Sbjct: 3   TLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVI 62

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA    YA  +LDILD    +I +R+YR+SCVF +G+Y+KDL+++G+DL+++ I+DN+P
Sbjct: 63  FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSP 122

Query: 263 QVYLF 267
             Y  
Sbjct: 123 YSYSL 127

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  151 bits (385), Expect = 4e-46
 Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 3/129 (2%)

Query: 142 PITLVLDLDETLVHSSFDNCKD---ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF 198
             TLVLDLDETLVHS+  + K+    DF  P+        V+V++RP +  FL+  + +F
Sbjct: 2   KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELF 61

Query: 199 DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV 258
           ++V+FTAG  +YA  +LD+LDP +    +R++RD CVF  G+Y+KDL++L RDL+++ I+
Sbjct: 62  ELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLNRDLSKVIII 121

Query: 259 DNTPQVYLF 267
           D++P  + F
Sbjct: 122 DDSPDSWPF 130

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score =  140 bits (355), Expect = 2e-41
 Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 9/125 (7%)

Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
            TLVLDLDETLVHSSF+     DF            V+V++RP L  FL+ ++  +++VI
Sbjct: 1   KTLVLDLDETLVHSSFEPDLPFDFVLNF-----NHGVYVKKRPGLDEFLQELSKYYEIVI 55

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA    YA  +LD LDP +     R+YR+SC F    Y+KDL++LGRDL+R+ IVDN+P
Sbjct: 56  FTASSKEYADPVLDKLDPKKKYFKHRLYRESCTF----YVKDLSLLGRDLSRVVIVDNSP 111

Query: 263 QVYLF 267
           + +L 
Sbjct: 112 RSFLL 116

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score =  109 bits (274), Expect = 2e-27
 Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
             TLVLDLDETLVHSSF      DF   +   +    V+V +RP L  FL  ++ + ++V
Sbjct: 212 KKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELV 271

Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
            FTA    YA  +LDILD ++     R++R+SCV   G Y+KD++ +GR L ++ I+DN+
Sbjct: 272 YFTASVKRYADPVLDILDSDKV-FSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNS 330

Query: 262 PQVYLF 267
           P  Y F
Sbjct: 331 PASYEF 336

Length = 390

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 71.9 bits (177), Expect = 2e-15
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 15/135 (11%)

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSK------------MEVQTVFVRQRPYLHMFL 191
            LVLDLD+TL+H++ D        + I               +       + RP+LH FL
Sbjct: 8   HLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFL 67

Query: 192 EAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTILGR 250
           +  + ++++ ++T G   YA  +  ++DP+    G R+  RD       + L  L     
Sbjct: 68  KEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRL--FPA 125

Query: 251 DLARIAIVDNTPQVY 265
           D + + I+D+   V+
Sbjct: 126 DESMVVIIDDREDVW 140

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	297
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	100.0
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	100.0
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	100.0
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	99.98
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	99.97
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.96
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.93
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.92
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	99.77
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	98.65
COG4996	164	Predicted phosphatase [General function prediction	98.41
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.3
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.19
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.17
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	97.92
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	97.88
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.86
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.82
PRK14988	224	GMP/IMP nucleotidase; Provisional	97.59
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	97.57
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.54
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.49
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.47
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.44
PHA02530	300	pseT polynucleotide kinase; Provisional	97.33
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.3
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.14
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.06
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.98
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	96.92
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	96.78
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	96.69
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	96.67
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	96.62
PRK13582	205	thrH phosphoserine phosphatase; Provisional	96.58
PRK06769	173	hypothetical protein; Validated	96.53
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	96.43
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	96.41
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	96.38
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	96.29
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	96.24
PRK13288	214	pyrophosphatase PpaX; Provisional	96.24
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	96.22
PRK09449	224	dUMP phosphatase; Provisional	96.16
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	96.14
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	96.12
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	96.07
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	96.0
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	95.98
PRK08238	479	hypothetical protein; Validated	95.7
PRK13222	226	phosphoglycolate phosphatase; Provisional	95.65
PRK13226	229	phosphoglycolate phosphatase; Provisional	95.49
PRK11587	218	putative phosphatase; Provisional	95.47
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	95.46
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	95.46
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	95.46
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	95.42
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.37
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	95.35
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	95.28
PLN02575	381	haloacid dehalogenase-like hydrolase	95.18
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	95.15
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	95.03
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	94.97
PRK13223	272	phosphoglycolate phosphatase; Provisional	94.84
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	94.77
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	94.73
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	94.72
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	94.65
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	94.64
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	94.63
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	94.6
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	94.54
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	94.54
PHA02597	197	30.2 hypothetical protein; Provisional	94.52
PRK13225	273	phosphoglycolate phosphatase; Provisional	94.34
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	94.21
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	94.02
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	93.99
PLN02940	382	riboflavin kinase	93.99
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	93.99
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	93.85
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.84
PRK10563	221	6-phosphogluconate phosphatase; Provisional	93.81
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	93.64
COG0241	181	HisB Histidinol phosphatase and related phosphatas	93.45
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	93.25
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	93.24
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	93.09
PLN02811	220	hydrolase	93.0
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	92.94
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	92.9
PTZ00445	219	p36-lilke protein; Provisional	92.81
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	92.77
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	92.67
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	92.6
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	92.53
PRK10513	270	sugar phosphate phosphatase; Provisional	92.5
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	91.87
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	91.76
PRK10444	248	UMP phosphatase; Provisional	91.69
PRK01158	230	phosphoglycolate phosphatase; Provisional	91.6
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	91.54
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	91.5
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	91.47
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	91.46
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	91.4
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	91.1
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	90.86
PRK10976	266	putative hydrolase; Provisional	90.74
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	90.64
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	90.57
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	90.22
PLN02645	311	phosphoglycolate phosphatase	89.9
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	89.89
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	89.52
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	89.45
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	89.41
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	89.1
COG4359	220	Uncharacterized conserved protein [Function unknow	88.52
PTZ00174	247	phosphomannomutase; Provisional	87.52
PLN02423	245	phosphomannomutase	87.32
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	86.96
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	86.25
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	86.24
COG2503	274	Predicted secreted acid phosphatase [General funct	85.89
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	85.35
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	84.41
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	84.24
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	84.22
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	84.1
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	83.73
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	83.41
PRK10748	238	flavin mononucleotide phosphatase; Provisional	83.09
COG0546	220	Gph Predicted phosphatases [General function predi	82.17
PLN03017	366	trehalose-phosphatase	81.2
PLN02887	580	hydrolase family protein	80.29
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	80.06
PLN02954	224	phosphoserine phosphatase	80.02

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=100.00  E-value=1.1e-43  Score=329.26  Aligned_cols=161  Identities=43%  Similarity=0.727  Sum_probs=152.6

Q ss_pred             CCCCCCCCCCCcEEEEeCCcceeeee--ccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460          132 TPLREPIAGLPITLVLDLDETLVHSS--FDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI  209 (297)
Q Consensus       132 llP~~~~~~~k~tLVLDLDeTLVhs~--~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~  209 (297)
                      ++|......+|+||||||||||||++  ..+...++|.+++.+++..+.+||.+|||+++||+.++++||++||||+.+.
T Consensus        79 ~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~  158 (262)
T KOG1605|consen   79 VLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEV  158 (262)
T ss_pred             cCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHH
Confidence            44555557899999999999999999  6777789999999999889999999999999999999999999999999999


Q ss_pred             cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460          210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY  281 (297)
Q Consensus       210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~  281 (297)
                      ||.+|++.|||.+++|.+|+||++|...+|.|+|||+.+|+|+++||||||+|.+|.+|        +|++|+.|+||++
T Consensus       159 Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~  238 (262)
T KOG1605|consen  159 YADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLK  238 (262)
T ss_pred             HHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHH
Confidence            99999999999888999999999999999999999999999999999999999999999        9999999999999


Q ss_pred             HHHHHHHHHhh
Q 022460          282 LSFYINASLDI  292 (297)
Q Consensus       282 L~p~L~~La~v  292 (297)
                      |+|||++|+.+
T Consensus       239 LlpfLe~L~~~  249 (262)
T KOG1605|consen  239 LLPFLEALAFV  249 (262)
T ss_pred             HHHHHHHhccc
Confidence            99999999854

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=100.00  E-value=9.3e-40  Score=282.87  Aligned_cols=152  Identities=43%  Similarity=0.717  Sum_probs=143.3

Q ss_pred             CcEEEEeCCcceeeeeccCCC-CCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCK-DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~-~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      |+||||||||||||++..+.. ..++.+++..++...++||++|||+++||++|+++|||+|||++.+.||++|++.|||
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp   80 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR   80 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence            679999999999999888765 6788888887777889999999999999999999999999999999999999999999


Q ss_pred             CCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHHHHHHHHHHHhh
Q 022460          221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIYLSFYINASLDI  292 (297)
Q Consensus       221 ~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~L~p~L~~La~v  292 (297)
                      .+.+|++++||++|...+|.+.|||+.+|++++++|||||+|..|..|        +|.|+.+|++|++|+|||+.|+..
T Consensus        81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~  160 (162)
T TIGR02251        81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE  160 (162)
T ss_pred             CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence            988999999999999999999999999999999999999999999876        999999999999999999999986


Q ss_pred             h
Q 022460          293 L  293 (297)
Q Consensus       293 ~  293 (297)
                      .
T Consensus       161 ~  161 (162)
T TIGR02251       161 D  161 (162)
T ss_pred             C
Confidence            4

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=100.00  E-value=1.6e-36  Score=258.35  Aligned_cols=147  Identities=39%  Similarity=0.646  Sum_probs=121.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ  222 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~  222 (297)
                      |||||||||||||+...+..+.++...   . ....++|++|||+++||++++++|||+|||++++.||++|++.|||++
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~   76 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG   76 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred             CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence            699999999999998876554444322   2 456789999999999999999999999999999999999999999988


Q ss_pred             ceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCC-CCChhHHHHHHHHHHHHhhh
Q 022460          223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINY-PPDILIIYLSFYINASLDIL  293 (297)
Q Consensus       223 ~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d-~~D~eLl~L~p~L~~La~v~  293 (297)
                      .+|++++||++|....|.++|||+++|+++++||||||+|.+|..|        +|.++ ++|++|++|++||+.|+...
T Consensus        77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~  156 (159)
T PF03031_consen   77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED  156 (159)
T ss_dssp             SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred             cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence            8999999999999999988999999999999999999999999876        99999 99999999999999999764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=99.98  E-value=2.3e-32  Score=244.45  Aligned_cols=141  Identities=21%  Similarity=0.244  Sum_probs=118.0

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhh
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      ..+|+||||||||||||+....                ...++.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus        18 ~~~kklLVLDLDeTLvh~~~~~----------------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l   81 (195)
T TIGR02245        18 REGKKLLVLDIDYTLFDHRSPA----------------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL   81 (195)
T ss_pred             CCCCcEEEEeCCCceEcccccC----------------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence            4678999999999999974211                134688999999999999999999999999999999999999


Q ss_pred             cCCC-ceeeeEEeccCeee------eCCc-eeeeccccC------CCCCcEEEEECCCcccccC--------CCCC----
Q 022460          219 DPNQ-TLIGQRVYRDSCVF------ADGE-YLKDLTILG------RDLARIAIVDNTPQVYLFL--------SYIN----  272 (297)
Q Consensus       219 DP~~-~~f~~rL~Rd~C~~------~~g~-~iKDLs~Lg------rdl~~vVIIDDsp~~~~~q--------~w~~----  272 (297)
                      ++.+ ..+..++++++|.+      ..|. ++|||+.++      +++++||||||+|.+|.+|        +|++    
T Consensus        82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~  161 (195)
T TIGR02245        82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN  161 (195)
T ss_pred             cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence            7643 23566777888842      3555 499999883      3889999999999999998        8985    


Q ss_pred             CCCChhHHHHHHHHHHHHhhhcc
Q 022460          273 YPPDILIIYLSFYINASLDILYS  295 (297)
Q Consensus       273 d~~D~eLl~L~p~L~~La~v~s~  295 (297)
                      +++|+||++|+|||+.||+++.+
T Consensus       162 ~~~D~eL~~L~~yL~~la~~~Dv  184 (195)
T TIGR02245       162 RGTDQELLKLTQYLKTIAELEDF  184 (195)
T ss_pred             CcccHHHHHHHHHHHHHhcCccc
Confidence            57999999999999999987653

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.97  E-value=2.3e-31  Score=253.77  Aligned_cols=151  Identities=26%  Similarity=0.463  Sum_probs=137.7

Q ss_pred             CCCCCCCCCCCC---CCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEE
Q 022460          125 APSYWPRTPLRE---PIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV  201 (297)
Q Consensus       125 ~~~~~p~llP~~---~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv  201 (297)
                      .++.++.|+|++   +..++++||||+|.++|||..+        ++       ..+|.+++|||++.||..++++||||
T Consensus       169 ~EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdw--------s~-------~tGwRf~kRPgvD~FL~~~a~~yEIV  233 (393)
T KOG2832|consen  169 KEPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDW--------SY-------KTGWRFKKRPGVDYFLGHLAKYYEIV  233 (393)
T ss_pred             cCCchhhhCCCCCCCcccCCCceEEEEeeeeEeccch--------hh-------hcCceeccCchHHHHHHhhcccceEE
Confidence            456667777763   2359999999999999999754        32       35789999999999999999999999


Q ss_pred             EEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCC
Q 022460          202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINY  273 (297)
Q Consensus       202 IfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d  273 (297)
                      |||+.+..||.+|++.|||+| +|+++|||++|.+.+|+++|||++|+||+++||+||-.+..+.+|        +|.|+
T Consensus       234 i~sse~gmt~~pl~d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn  312 (393)
T KOG2832|consen  234 VYSSEQGMTVFPLLDALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGN  312 (393)
T ss_pred             EEecCCccchhhhHhhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCC
Confidence            999999999999999999997 899999999999999999999999999999999999999999998        89999


Q ss_pred             CCChhHHHHHHHHHHHHh
Q 022460          274 PPDILIIYLSFYINASLD  291 (297)
Q Consensus       274 ~~D~eLl~L~p~L~~La~  291 (297)
                      .+|+.|++|++||+.||.
T Consensus       313 ~dDt~L~dL~~FL~~ia~  330 (393)
T KOG2832|consen  313 DDDTSLFDLLAFLEYIAQ  330 (393)
T ss_pred             cccchhhhHHHHHHHHHH
Confidence            999999999999999875

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.96  E-value=4.1e-30  Score=222.15  Aligned_cols=127  Identities=25%  Similarity=0.469  Sum_probs=106.2

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCcee------------eeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCC
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSF------------PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG  206 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~------------~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas  206 (297)
                      ..+|++||||||||||||+..+........            ...+.......++++|||+++||+++++.|+++|||++
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~   82 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG   82 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence            468999999999999999886543221110            01122224678999999999999999999999999999


Q ss_pred             ccccHHHHHHhhcCCCceeeeEE-eccCeeeeCCceeeecc-ccCCCCCcEEEEECCCcccccC
Q 022460          207 QSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVYLFL  268 (297)
Q Consensus       207 ~~~YA~~Il~~LDP~~~~f~~rL-~Rd~C~~~~g~~iKDLs-~Lgrdl~~vVIIDDsp~~~~~q  268 (297)
                      .+.||++|++.|||.+.+|++|+ +|++|.   |.++|||+ .+|+++++||||||+|.+|..|
T Consensus        83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~  143 (156)
T TIGR02250        83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWH  143 (156)
T ss_pred             cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcC
Confidence            99999999999999998997775 599995   88999995 5599999999999999999988

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.93  E-value=8.3e-27  Score=226.48  Aligned_cols=160  Identities=36%  Similarity=0.563  Sum_probs=147.9

Q ss_pred             CCCCCCC-CCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460          131 RTPLREP-IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI  209 (297)
Q Consensus       131 ~llP~~~-~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~  209 (297)
                      .++|+.. ...++++|++|||+||+|+........+|...+...+..+.+||.+||++++||..++++|++++||++.+.
T Consensus       200 ~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~  279 (390)
T COG5190         200 TLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR  279 (390)
T ss_pred             cccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence            4444433 458899999999999999998888888888777777778899999999999999999999999999999999


Q ss_pred             cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460          210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY  281 (297)
Q Consensus       210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~  281 (297)
                      ||++|++.||+.+ .|++|+||.+|....|.|+|||+.+||++.+|||||++|.+|.++        +|.+++.|.+|+.
T Consensus       280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~  358 (390)
T COG5190         280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN  358 (390)
T ss_pred             hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence            9999999999997 899999999999999999999999999999999999999999887        9999999999999


Q ss_pred             HHHHHHHHHh
Q 022460          282 LSFYINASLD  291 (297)
Q Consensus       282 L~p~L~~La~  291 (297)
                      |+++|+.|.+
T Consensus       359 ll~~le~L~~  368 (390)
T COG5190         359 LLPFLEDLPD  368 (390)
T ss_pred             hccccccccc
Confidence            9999998876

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.92  E-value=2.8e-24  Score=182.74  Aligned_cols=137  Identities=42%  Similarity=0.782  Sum_probs=119.6

Q ss_pred             CCcEEEEeCCcceeeeeccC---CCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHh
Q 022460          141 LPITLVLDLDETLVHSSFDN---CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~---~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~  217 (297)
                      +|++|||||||||||++...   .....+...+.+.+....++++.|||+++||+++.+.|+++|||++.+.||+.+++.
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~   80 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL   80 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence            58899999999999996422   223344555566677888999999999999999999999999999999999999999


Q ss_pred             hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCCh
Q 022460          218 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDI  277 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~  277 (297)
                      +++.+.+|...+++++|...+..|.|+|+++|++++++|+|||++..|..+        +|.++.+|+
T Consensus        81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~  148 (148)
T smart00577       81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT  148 (148)
T ss_pred             hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence            999766678999999999877779999999999999999999999988876        899998874

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.77  E-value=9.9e-19  Score=178.53  Aligned_cols=126  Identities=27%  Similarity=0.440  Sum_probs=97.7

Q ss_pred             CCCcEEEEeCCcceeeeeccCCC---------CCC------ceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEc
Q 022460          140 GLPITLVLDLDETLVHSSFDNCK---------DAD------FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT  204 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~---------~~d------~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfT  204 (297)
                      ++++.||+|||.||+|+...+.-         ...      -.+.+...+....+|||+|||+++||++++++||++|||
T Consensus       144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT  223 (635)
T KOG0323|consen  144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT  223 (635)
T ss_pred             hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence            45579999999999999764321         000      001111113345689999999999999999999999999


Q ss_pred             CCccccHHHHHHhhcCCCceeeeEEe-ccCeeeeCCceeeecccc-CCCCCcEEEEECCCcccccC
Q 022460          205 AGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVYLFL  268 (297)
Q Consensus       205 as~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~~~q  268 (297)
                      .|.+.||..|++.|||+|+||++|++ |+.   ..+.-.+||..+ .++.+.||||||+..+|..+
T Consensus       224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~  286 (635)
T KOG0323|consen  224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDH  286 (635)
T ss_pred             ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCC
Confidence            99999999999999999999999988 665   122335666666 67778899999999999876

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=98.65  E-value=1.8e-08  Score=98.90  Aligned_cols=125  Identities=26%  Similarity=0.459  Sum_probs=99.0

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCC----------ceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCcc
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDAD----------FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQS  208 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d----------~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~  208 (297)
                      +.++..||.|+|.|.+|+...+..+..          .-..-.+......++++.||++..|+...++.||+.+||.|.+
T Consensus        23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~  102 (390)
T COG5190          23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR  102 (390)
T ss_pred             cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence            567889999999999999876621110          0000111123456899999999999999999999999999999


Q ss_pred             ccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeecccc-CCCCCcEEEEECCCccc
Q 022460          209 IYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVY  265 (297)
Q Consensus       209 ~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~  265 (297)
                      .||..+..++||.|++|..|....+-  ..+.-.|-++++ ..+.+.++++||++..|
T Consensus       103 ~~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~  158 (390)
T COG5190         103 AYAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNMVVIIDDRGDVW  158 (390)
T ss_pred             cchhhhhhcccccccccccccccccc--cccchhhhhhhcCccccccccccccccccC
Confidence            99999999999999999988774432  234556888877 88999999999999999

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.41  E-value=4.4e-07  Score=77.34  Aligned_cols=122  Identities=15%  Similarity=0.010  Sum_probs=85.3

Q ss_pred             EEEEeCCccee-eeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          144 TLVLDLDETLV-HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       144 tLVLDLDeTLV-hs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      .+|||+|+||+ |-......+|-.++.-..-....+.-|.+||++.+||+++.. -|-+..+|...+.-|-+++.+||-.
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~   81 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL   81 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence            57999999999 433333333322222111122346778999999999999986 5888899999999999999999998


Q ss_pred             CceeeeEEeccCeeeeCCceeeecccc------CCCCCcEEEEECCCccccc
Q 022460          222 QTLIGQRVYRDSCVFADGEYLKDLTIL------GRDLARIAIVDNTPQVYLF  267 (297)
Q Consensus       222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~L------grdl~~vVIIDDsp~~~~~  267 (297)
                      . +|++.+...|= +..-...|-|+.+      ...++++|.+||+...+..
T Consensus        82 ~-yFhy~ViePhP-~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~  131 (164)
T COG4996          82 Q-YFHYIVIEPHP-YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGN  131 (164)
T ss_pred             h-hEEEEEecCCC-hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHH
Confidence            5 89988887762 2122222333333      3467899999999877654

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.30  E-value=2.5e-07  Score=76.95  Aligned_cols=110  Identities=16%  Similarity=0.083  Sum_probs=72.9

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC-ccccHHHHHHhhcC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG-QSIYAGQLLDILDP  220 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas-~~~YA~~Il~~LDP  220 (297)
                      +.+|+|||+||+..-..... .+-..    +.   .   ...||+.++|+++.+ .+.++|.|++ .+.++..+++.+.+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~-~~~~~----~~---~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~   69 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVG-EDPII----DL---E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED   69 (128)
T ss_pred             CEEEEeCCCCCCCCCccccc-CCcch----hh---H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence            36899999999975210000 00000    00   0   578999999999975 6999999999 89999999998762


Q ss_pred             C------CceeeeEEeccCeeeeCCceeeeccccC--CCCCcEEEEECCCcc
Q 022460          221 N------QTLIGQRVYRDSCVFADGEYLKDLTILG--RDLARIAIVDNTPQV  264 (297)
Q Consensus       221 ~------~~~f~~rL~Rd~C~~~~g~~iKDLs~Lg--rdl~~vVIIDDsp~~  264 (297)
                      .      .++|......+.- .....+.+=+.++|  ...+++++|||++..
T Consensus        70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n  120 (128)
T TIGR01681        70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDN  120 (128)
T ss_pred             cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhH
Confidence            1      1244444433221 11123556666778  899999999999853

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.19  E-value=1.1e-06  Score=69.49  Aligned_cols=103  Identities=17%  Similarity=0.221  Sum_probs=70.1

Q ss_pred             EEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ  222 (297)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~  222 (297)
                      ++|||+||||+........               ...+..+|++.++|+.+.+. +.++|.|++.+.++..+++.+.-..
T Consensus         1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~   65 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD   65 (139)
T ss_pred             CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence            4799999999976421100               12356899999999999986 9999999999999999999875432


Q ss_pred             ceeeeEEeccCeeee----------------CC---ceeeeccccCCCCCcEEEEECCC
Q 022460          223 TLIGQRVYRDSCVFA----------------DG---EYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       223 ~~f~~rL~Rd~C~~~----------------~g---~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                       ++...+..+.....                ..   .+.+-+..++.+.+.++.|+|++
T Consensus        66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~  123 (139)
T cd01427          66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL  123 (139)
T ss_pred             -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH
Confidence             34444443322211                11   12223334466688999999987

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.17  E-value=3.3e-06  Score=74.68  Aligned_cols=121  Identities=13%  Similarity=0.050  Sum_probs=78.1

Q ss_pred             cEEEEeCCcceee-eeccCCCCCCceee-ee-ecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC-ccccHHHHHHh
Q 022460          143 ITLVLDLDETLVH-SSFDNCKDADFSFP-IH-SKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG-QSIYAGQLLDI  217 (297)
Q Consensus       143 ~tLVLDLDeTLVh-s~~~~~~~~d~~~~-i~-~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas-~~~YA~~Il~~  217 (297)
                      ..+|+|||+||+. +..+-...+..... .. .-+.....-+..+||+.++|+.|.+ .+.+.|-|++ ...++..+++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~   82 (174)
T TIGR01685         3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT   82 (174)
T ss_pred             cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence            3789999999994 43322222211110 00 0011223457789999999999985 5999999988 89999999999


Q ss_pred             hcCC--C------ceeeeEEeccCeeeeCCce----eeecccc---CCCCCcEEEEECCCccc
Q 022460          218 LDPN--Q------TLIGQRVYRDSCVFADGEY----LKDLTIL---GRDLARIAIVDNTPQVY  265 (297)
Q Consensus       218 LDP~--~------~~f~~rL~Rd~C~~~~g~~----iKDLs~L---grdl~~vVIIDDsp~~~  265 (297)
                      ++-.  |      .+|+..+.-+...  ....    .+.+...   |-+.+++++|||++.-.
T Consensus        83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~--~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di  143 (174)
T TIGR01685        83 FEITYAGKTVPMHSLFDDRIEIYKPN--KAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNV  143 (174)
T ss_pred             CCcCCCCCcccHHHhceeeeeccCCc--hHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhH
Confidence            9854  2      4677777654321  1111    2222222   47789999999999543

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01684 viral_ppase viral phosphatase

Probab=97.92  E-value=2.1e-05  Score=75.09  Aligned_cols=72  Identities=19%  Similarity=0.213  Sum_probs=59.6

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeC-ccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI  217 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~R-P~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~  217 (297)
                      ..+..+|+||||||+-...                     -|..| |++.+.|+++.+. +.++|||++.+.+|..+++.
T Consensus       124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~  182 (301)
T TIGR01684       124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK  182 (301)
T ss_pred             ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence            5667999999999997421                     25689 9999999999986 89999999999999999999


Q ss_pred             hcCCCceeeeEEeccC
Q 022460          218 LDPNQTLIGQRVYRDS  233 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~  233 (297)
                      ++-.+ +|+..+..++
T Consensus       183 lGLd~-YFdvIIs~Gd  197 (301)
T TIGR01684       183 VKLDR-YFDIIISGGH  197 (301)
T ss_pred             cCCCc-ccCEEEECCc
Confidence            98875 6765555333

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=97.88  E-value=2.2e-05  Score=64.50  Aligned_cols=101  Identities=23%  Similarity=0.139  Sum_probs=68.6

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc--------cccHHH
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ--------SIYAGQ  213 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~--------~~YA~~  213 (297)
                      +.|+||+||||++....  .           ...  ......|++.++|+++.+ .+.++|-|.+.        ..++..
T Consensus         1 k~~~~D~dgtL~~~~~~--~-----------~~~--~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~   65 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPY--V-----------DDE--DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR   65 (132)
T ss_pred             CEEEEeCCCceecCCCC--C-----------CCH--HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence            36899999999963110  0           000  124578999999999975 49999999998        778888


Q ss_pred             HHHhhcCCCceeeeEEeccCe-eeeCCceeeecccc-CCCCCcEEEEECC
Q 022460          214 LLDILDPNQTLIGQRVYRDSC-VFADGEYLKDLTIL-GRDLARIAIVDNT  261 (297)
Q Consensus       214 Il~~LDP~~~~f~~rL~Rd~C-~~~~g~~iKDLs~L-grdl~~vVIIDDs  261 (297)
                      +++.+.-.   +...++...+ ......+.+-++.+ +.+.+++++|+|+
T Consensus        66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~  112 (132)
T TIGR01662        66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQ  112 (132)
T ss_pred             HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCC
Confidence            88888653   2222232211 11223455666777 5899999999994

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01686 FkbH FkbH-like domain

Probab=97.86  E-value=1.4e-05  Score=76.20  Aligned_cols=108  Identities=15%  Similarity=0.082  Sum_probs=72.4

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHh--
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI--  217 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~--  217 (297)
                      .+++||+|||+||+....-.            .+...-......|++.++|+.+.+ -+.+.|-|...+..|..+++.  
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e------------~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~   69 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGE------------DGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK   69 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEcc------------CCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence            46799999999999754211            010000112247899999999986 589999999999999999987  


Q ss_pred             --hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          218 --LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       218 --LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                        +.... +|......  .......+.+-+..+|-+++.+|+|||++.
T Consensus        70 ~~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~  114 (320)
T TIGR01686        70 DFILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPA  114 (320)
T ss_pred             cccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHH
Confidence              54332 45433221  111112344555667999999999999873

The C-terminal portion of this domain is unique to this family (by BLAST).

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.82  E-value=4.2e-05  Score=73.09  Aligned_cols=73  Identities=21%  Similarity=0.252  Sum_probs=60.4

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeC-ccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI  217 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~R-P~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~  217 (297)
                      ..++.+|+||||||+....                     -|..| |++.+.|+++.+. +.++|+|++.+.+|..+++.
T Consensus       126 ~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~  184 (303)
T PHA03398        126 EIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE  184 (303)
T ss_pred             eeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence            6678999999999998522                     25689 9999999999975 89999999999999999999


Q ss_pred             hcCCCceeeeEEeccCe
Q 022460          218 LDPNQTLIGQRVYRDSC  234 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~C  234 (297)
                      +.-.+ +|...+..++.
T Consensus       185 lgL~~-yFDvII~~g~i  200 (303)
T PHA03398        185 TKLEG-YFDIIICGGRK  200 (303)
T ss_pred             cCCCc-cccEEEECCCc
Confidence            98864 67655554443

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=97.59  E-value=2.2e-05  Score=71.03  Aligned_cols=82  Identities=12%  Similarity=0.085  Sum_probs=65.0

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+ .+.+.|-|++.+.++...++.+.-. .+|+..+..+.....+   ..|.+-+.++|-++++++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            5678999999999987 4899999999999999999887654 3688777655433222   135666778899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       171 ~igDs~~  177 (224)
T PRK14988        171 FIDDSEP  177 (224)
T ss_pred             EEcCCHH
Confidence            9999984

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=97.57  E-value=8.8e-05  Score=65.48  Aligned_cols=119  Identities=15%  Similarity=0.182  Sum_probs=64.2

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeee--cCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcC-CccccHHHHHHh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHS--KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTA-GQSIYAGQLLDI  217 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~--~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTa-s~~~YA~~Il~~  217 (297)
                      ++.+|+|||.||+.......-.+-|+-.-.-  -....+--+++-|++...|+++.. ..+|.+-|. ..+..|.++|+.
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~   82 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL   82 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence            4689999999999765433322222211000  001245568899999999999996 689999994 578999999999


Q ss_pred             hcCC---------CceeeeEEeccCeeeeCCceeeecc-ccCCCCCcEEEEECCCc
Q 022460          218 LDPN---------QTLIGQRVYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       218 LDP~---------~~~f~~rL~Rd~C~~~~g~~iKDLs-~Lgrdl~~vVIIDDsp~  263 (297)
                      |.-.         ..+|++.=.-.++   +..+++.|. ..|.+.+.+++.||...
T Consensus        83 l~i~~~~~~~~~~~~~F~~~eI~~gs---K~~Hf~~i~~~tgI~y~eMlFFDDe~~  135 (169)
T PF12689_consen   83 LEIDDADGDGVPLIEYFDYLEIYPGS---KTTHFRRIHRKTGIPYEEMLFFDDESR  135 (169)
T ss_dssp             TT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HH
T ss_pred             cCCCccccccccchhhcchhheecCc---hHHHHHHHHHhcCCChhHEEEecCchh
Confidence            9776         1244432111111   223455554 45889999999999863

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.54  E-value=0.00019  Score=60.65  Aligned_cols=104  Identities=22%  Similarity=0.231  Sum_probs=66.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcc-------------
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS-------------  208 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~-------------  208 (297)
                      ++|+||+||||+........ ..          .  .-+...||+.++|+.|.+ .|.++|-|++.+             
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~-~~----------~--~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~   67 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYP-RS----------L--DDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA   67 (147)
T ss_pred             CeEEEeCCCceeccCCcccC-CC----------H--HHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence            47899999999986431100 00          0  113578999999999975 599999999874             


Q ss_pred             --ccHHHHHHhhcCCCceeeeEEec-----cC--ee-eeCCceeeeccccCCCCCcEEEEECCC
Q 022460          209 --IYAGQLLDILDPNQTLIGQRVYR-----DS--CV-FADGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 --~YA~~Il~~LDP~~~~f~~rL~R-----d~--C~-~~~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                        .++..+++.+.-.   +...++.     +.  +. .....+.+=+..+|-+++++++|.|++
T Consensus        68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~  128 (147)
T TIGR01656        68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL  128 (147)
T ss_pred             HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCH
Confidence              4566666666443   2222222     11  11 111234455566788999999999985

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.49  E-value=0.00017  Score=62.63  Aligned_cols=103  Identities=17%  Similarity=0.172  Sum_probs=65.4

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc----ccHH-----
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS----IYAG-----  212 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~----~YA~-----  212 (297)
                      +.|.||+||||+-..       ++...        .--+..-||+.++|++|.+. |.++|.|++..    .|+.     
T Consensus         2 ~~~~~D~Dgtl~~~~-------~~~~~--------~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~   66 (176)
T TIGR00213         2 KAIFLDRDGTINIDH-------GYVHE--------IDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ   66 (176)
T ss_pred             CEEEEeCCCCEeCCC-------CCCCC--------HHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence            578999999998311       11100        01245679999999999865 99999999885    2333     


Q ss_pred             ------HHHHhhcCCCceeeeEEecc-----------Ceeee---CCceeeeccccCCCCCcEEEEECCCc
Q 022460          213 ------QLLDILDPNQTLIGQRVYRD-----------SCVFA---DGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       213 ------~Il~~LDP~~~~f~~rL~Rd-----------~C~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                            .++..+...   |...++..           .|...   .+.|.+-++++|-+++++++|.|++.
T Consensus        67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~  134 (176)
T TIGR00213        67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLE  134 (176)
T ss_pred             HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHH
Confidence                  333332211   33333321           22221   22456667788999999999999974

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.47  E-value=0.00014  Score=63.25  Aligned_cols=104  Identities=16%  Similarity=0.030  Sum_probs=67.2

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc------------
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS------------  208 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~------------  208 (297)
                      .+.|+||+||||+-... .     |.      ....  .+...||+.++|+++.+. |.++|-|++..            
T Consensus         3 ~~~~~~d~~~t~~~~~~-~-----~~------~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~   68 (181)
T PRK08942          3 MKAIFLDRDGVINVDSD-G-----YV------KSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN   68 (181)
T ss_pred             ccEEEEECCCCcccCCc-c-----cc------CCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence            46899999999975321 0     10      0011  245789999999999975 99999998863            


Q ss_pred             ---ccHHHHHHhhcCCCceeeeEEeccCe-----eee---CCceeeeccccCCCCCcEEEEECCC
Q 022460          209 ---IYAGQLLDILDPNQTLIGQRVYRDSC-----VFA---DGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 ---~YA~~Il~~LDP~~~~f~~rL~Rd~C-----~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                         .+...+++.+   |-.|...++...+     ...   ...|.+-+..+|.+++++++|.|++
T Consensus        69 ~~~~~~~~~l~~~---g~~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~  130 (181)
T PRK08942         69 ALHEKMDWSLADR---GGRLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSL  130 (181)
T ss_pred             HHHHHHHHHHHHc---CCccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCH
Confidence               2223334333   3235555554322     111   1245666777899999999999997

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.44  E-value=0.0003  Score=61.10  Aligned_cols=105  Identities=17%  Similarity=0.088  Sum_probs=71.7

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC---------------
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG---------------  206 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas---------------  206 (297)
                      +.+.||.||||++....     .|.  .     ...-.++.-||+.++|++|.+ .|.++|.|+.               
T Consensus         2 ~~~~~d~dg~l~~~~~~-----~~~--~-----~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~   69 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPS-----DFQ--V-----DALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG   69 (161)
T ss_pred             CEEEEeCCCCccccCCC-----ccc--c-----CCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence            58999999999984210     111  0     111136778999999999987 5999999996               


Q ss_pred             ccccHHHHHHhhcCCCceeeeEEec-----cCeeeeCC---ceeeeccccCCCCCcEEEEECCC
Q 022460          207 QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       207 ~~~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~~g---~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      ...++..+++.++-.   |...++.     +.+.....   .+..-++.+|.+.+++++|.|+.
T Consensus        70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~  130 (161)
T TIGR01261        70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRE  130 (161)
T ss_pred             HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCH
Confidence            345777777777664   6666553     44433222   23344455688899999999986

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=97.33  E-value=0.00018  Score=67.02  Aligned_cols=114  Identities=13%  Similarity=0.165  Sum_probs=79.9

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .++..+++|+||||.......  +.+|.      .   ..-....|++.++|+.+.+. +.++|.|+.....+..+++.|
T Consensus       156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~------~---~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l  224 (300)
T PHA02530        156 GLPKAVIFDIDGTLAKMGGRS--PYDWT------K---VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL  224 (300)
T ss_pred             CCCCEEEEECCCcCcCCCCCC--ccchh------h---cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence            355799999999998653321  11221      0   01234699999999999865 899999999999999999999


Q ss_pred             cCCCceeeeEEeccCe-------eeeCC---ceeeeccccCC-CCCcEEEEECCCcc
Q 022460          219 DPNQTLIGQRVYRDSC-------VFADG---EYLKDLTILGR-DLARIAIVDNTPQV  264 (297)
Q Consensus       219 DP~~~~f~~rL~Rd~C-------~~~~g---~~iKDLs~Lgr-dl~~vVIIDDsp~~  264 (297)
                      ...+.+|+..+..+.+       .....   .+.+-|..++. +.+.++.|||++..
T Consensus       225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d  281 (300)
T PHA02530        225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQV  281 (300)
T ss_pred             HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHH
Confidence            8887677766555521       11111   23445566677 57899999999854

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.30  E-value=0.00065  Score=64.56  Aligned_cols=72  Identities=22%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEE-eCccHHHHHHHHhcCc-EEEEEcCCccccHHHHHHh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVR-QRPYLHMFLEAVASMF-DVVIFTAGQSIYAGQLLDI  217 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~-~RP~l~eFL~~ls~~f-EIvIfTas~~~YA~~Il~~  217 (297)
                      .++-.+|+|||+|||-....                     ++ .=|.+-+-|.++.+.+ -+++||.|.+++|...++.
T Consensus       120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~  178 (297)
T PF05152_consen  120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE  178 (297)
T ss_pred             CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence            45559999999999975321                     22 2388999999999876 8999999999999999999


Q ss_pred             hcCCCceeeeEEeccC
Q 022460          218 LDPNQTLIGQRVYRDS  233 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~  233 (297)
                      +.-.+ +|+-.|.+.+
T Consensus       179 ~~L~~-~Fd~ii~~G~  193 (297)
T PF05152_consen  179 LKLEG-YFDIIICGGN  193 (297)
T ss_pred             hCCcc-ccEEEEeCCc
Confidence            98775 8988887554

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.14  E-value=0.0013  Score=57.24  Aligned_cols=107  Identities=19%  Similarity=0.225  Sum_probs=65.6

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccc-----------
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI-----------  209 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~-----------  209 (297)
                      +++++||+||||+-.....      .+.    .....+ ...-||+.+.|+.+. +.+.++|-|++...           
T Consensus        13 ~k~~~~D~Dgtl~~~~~~~------~~~----~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~   81 (166)
T TIGR01664        13 SKVAAFDLDGTLITTRSGK------VFP----TSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK   81 (166)
T ss_pred             CcEEEEeCCCceEecCCCC------ccc----CChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence            4689999999999643210      000    001111 224599999999997 56999999997763           


Q ss_pred             -cHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccC--CCCCcEEEEECCC
Q 022460          210 -YAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILG--RDLARIAIVDNTP  262 (297)
Q Consensus       210 -YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lg--rdl~~vVIIDDsp  262 (297)
                       ++..+++.+.-.   +...+.-+.....   .+.+..-+..+|  -+++++++|.|++
T Consensus        82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~  137 (166)
T TIGR01664        82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA  137 (166)
T ss_pred             HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence             456677776653   2222322221111   123333445567  7889999999986

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.06  E-value=0.0016  Score=54.93  Aligned_cols=73  Identities=19%  Similarity=0.148  Sum_probs=52.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHH-hcCcEEEEEcCCccccHH---------
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAV-ASMFDVVIFTAGQSIYAG---------  212 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~l-s~~fEIvIfTas~~~YA~---------  212 (297)
                      +.+++||||||+.....     .+.            .....|.+.+.|+++ .+-++|++.|+-......         
T Consensus         2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~   64 (126)
T TIGR01689         2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH   64 (126)
T ss_pred             CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence            47899999999763110     000            134688899999988 457999999999887766         


Q ss_pred             ---HHHHhhcCCCceeeeEEecc
Q 022460          213 ---QLLDILDPNQTLIGQRVYRD  232 (297)
Q Consensus       213 ---~Il~~LDP~~~~f~~rL~Rd  232 (297)
                         .+++.|+.++-.++..+.|.
T Consensus        65 ~~~~t~~wL~k~~ipYd~l~~~k   87 (126)
T TIGR01689        65 TLPIIILWLNQHNVPYDEIYVGK   87 (126)
T ss_pred             hHHHHHHHHHHcCCCCceEEeCC
Confidence               77888887775555555554

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.98  E-value=0.0015  Score=56.81  Aligned_cols=95  Identities=17%  Similarity=0.140  Sum_probs=67.8

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc-cccHHHHHHh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ-SIYAGQLLDI  217 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~-~~YA~~Il~~  217 (297)
                      ..-..+|+|+|+||.....                      ....|++.++|++|.+. +.++|.|++. ...+..+++.
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~   80 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA   80 (170)
T ss_pred             CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence            4556899999999996411                      23579999999999875 9999999998 6777777776


Q ss_pred             hcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          218 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      ++-..       +..........+.+-+..+|.+.+++++|+|+..
T Consensus        81 ~gl~~-------~~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~  119 (170)
T TIGR01668        81 LGIPV-------LPHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLF  119 (170)
T ss_pred             cCCEE-------EcCCCCCChHHHHHHHHHcCCCHHHEEEECCcch
Confidence            65321       1112222223445556677888999999999973

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=96.92  E-value=0.00091  Score=55.31  Aligned_cols=84  Identities=19%  Similarity=0.255  Sum_probs=69.0

Q ss_pred             EEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460          179 VFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (297)
Q Consensus       179 ~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~  254 (297)
                      ......|++.++|+.++ +.+.++|.|.+...++..+++.+... .+|+..+..++....+.   .|.+-+..+|.++++
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~  152 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE  152 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence            45789999999999999 78999999999999999999998666 47888887765544322   355666677999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +++|||++.
T Consensus       153 ~~~vgD~~~  161 (176)
T PF13419_consen  153 ILFVGDSPS  161 (176)
T ss_dssp             EEEEESSHH
T ss_pred             EEEEeCCHH
Confidence            999999973

...

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=96.78  E-value=0.0012  Score=58.28  Aligned_cols=82  Identities=15%  Similarity=0.184  Sum_probs=67.3

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      ++..+||+.++|+++.+. +.++|.|++...++...++.++-.. +|+..+..+.....+   ..|.+-++++|-+.+++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  170 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA  170 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence            457899999999999875 9999999999999999999987764 788877766543322   24667778889999999


Q ss_pred             EEEECCC
Q 022460          256 AIVDNTP  262 (297)
Q Consensus       256 VIIDDsp  262 (297)
                      |.|.|++
T Consensus       171 ~~igDs~  177 (221)
T TIGR02253       171 VMVGDRL  177 (221)
T ss_pred             EEECCCh
Confidence            9999997

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=96.69  E-value=0.0022  Score=59.35  Aligned_cols=94  Identities=12%  Similarity=0.057  Sum_probs=57.6

Q ss_pred             CCCCcEEEEeCCcceeeeecc-----C-CCCCCceeee--eecC---ceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCC
Q 022460          139 AGLPITLVLDLDETLVHSSFD-----N-CKDADFSFPI--HSKM---EVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAG  206 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~-----~-~~~~d~~~~i--~~~~---~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas  206 (297)
                      .++++.++|||||||+.++.-     + ....++.+-+  .+..   ....-.....|++.+||+++.+. +.++|-|+.
T Consensus        60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr  139 (237)
T TIGR01672        60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR  139 (237)
T ss_pred             CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence            355679999999999998761     1 0111111100  0000   00112233445599999999875 899999998


Q ss_pred             ----ccccHHHHHHhhcCCCceeeeEEeccC
Q 022460          207 ----QSIYAGQLLDILDPNQTLIGQRVYRDS  233 (297)
Q Consensus       207 ----~~~YA~~Il~~LDP~~~~f~~rL~Rd~  233 (297)
                          .+.+++.+++.+.-.. +|...+..+.
T Consensus       140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~  169 (237)
T TIGR01672       140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDK  169 (237)
T ss_pred             CCCcCHHHHHHHHHHhCCch-heeEEECCCC
Confidence                5568999998887654 5654444443

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=96.67  E-value=0.0044  Score=60.63  Aligned_cols=107  Identities=17%  Similarity=0.135  Sum_probs=68.1

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC----c--------
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG----Q--------  207 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas----~--------  207 (297)
                      +++.|+||-||||+.....     ++.       ....-.+...|++.++|+++.+ .+.++|.|+.    .        
T Consensus         1 ~~k~l~lDrDgtl~~~~~~-----~y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l   68 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPT-----DFQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF   68 (354)
T ss_pred             CCcEEEEeCCCCccCCCCc-----ccc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence            4679999999999986421     111       1112247789999999999986 5999999994    2        


Q ss_pred             ---cccHHHHHHhhcCCCceeeeEEec-----cCeeeeCC---ceeeeccccCCCCCcEEEEECCC
Q 022460          208 ---SIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       208 ---~~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~~g---~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                         ..++..+++.+   +-.|...++.     +.|.....   .+..-+..++-+++++++|-|++
T Consensus        69 ~~~~~~i~~iL~~~---gl~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~  131 (354)
T PRK05446         69 DPPHNLMMQIFESQ---GIKFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRE  131 (354)
T ss_pred             hhHHHHHHHHHHHc---CCceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence               23344444444   3335555443     34433221   22233345678889999999986

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=96.62  E-value=0.0018  Score=54.92  Aligned_cols=81  Identities=20%  Similarity=0.252  Sum_probs=62.2

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+||+.+||+.+.+ .+.++|.|++...+ ..++..++-.+ +|+..++.+.....+   ..|.+-+.++|.+.+++|
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  161 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL  161 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence            5788999999999986 59999999999988 66666566554 688877755443222   235556677899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       162 ~vgD~~~  168 (183)
T TIGR01509       162 FVDDSPA  168 (183)
T ss_pred             EEcCCHH
Confidence            9999974

HAD subfamilies caused by an overly broad single model.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=96.58  E-value=0.00074  Score=59.01  Aligned_cols=83  Identities=18%  Similarity=0.155  Sum_probs=54.7

Q ss_pred             EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEecc-Ceee-----eCC-ceeeeccccCCCC
Q 022460          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD-SCVF-----ADG-EYLKDLTILGRDL  252 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd-~C~~-----~~g-~~iKDLs~Lgrdl  252 (297)
                      .+..+||+.+||+.+.+.+.++|-|++...+++.+++.+.-.. +|..++.-+ ....     ..+ ....=+..++...
T Consensus        66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~  144 (205)
T PRK13582         66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG  144 (205)
T ss_pred             hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence            3556899999999999779999999999999999999987543 555443221 1100     001 0001112234444


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      .+++.|-|+..
T Consensus       145 ~~~v~iGDs~~  155 (205)
T PRK13582        145 YRVIAAGDSYN  155 (205)
T ss_pred             CeEEEEeCCHH
Confidence            68999999974

>PRK06769 hypothetical protein; Validated

Probab=96.53  E-value=0.0035  Score=54.63  Aligned_cols=102  Identities=18%  Similarity=0.231  Sum_probs=63.3

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcccc-----HHHHHH
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY-----AGQLLD  216 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y-----A~~Il~  216 (297)
                      ..|.||+||||.-..       .+    ...     --+..-||+.++|++|.+ -|.++|.|++....     ......
T Consensus         5 ~~~~~d~d~~~~~~~-------~~----~~~-----~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~   68 (173)
T PRK06769          5 QAIFIDRDGTIGGDT-------TI----HYP-----GSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ   68 (173)
T ss_pred             cEEEEeCCCcccCCC-------CC----CCH-----HHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence            579999999995110       00    000     024568999999999986 58999999876421     122333


Q ss_pred             hhcCCCceeeeEEe-c----cCee---eeCCceeeeccccCCCCCcEEEEECCC
Q 022460          217 ILDPNQTLIGQRVY-R----DSCV---FADGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       217 ~LDP~~~~f~~rL~-R----d~C~---~~~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      .+..-|  |...+. -    +...   ...+.+.+-++++|.+++++++|+|++
T Consensus        69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~  120 (173)
T PRK06769         69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW  120 (173)
T ss_pred             HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence            343333  333232 1    1111   112346677778899999999999997

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=96.43  E-value=0.0036  Score=54.98  Aligned_cols=81  Identities=10%  Similarity=0.059  Sum_probs=67.2

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---Cceeeecccc-CCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTIL-GRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~L-grdl~~vV  256 (297)
                      +..+||+.++|+++.+.+.++|-|++...++..+++.+.-.+ +|+..+..+.+...+   ..|.+-+.++ |.+++++|
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v  174 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL  174 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence            578999999999999889999999999999999999986654 788888766654322   2456777888 99999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       175 ~igD~~  180 (224)
T TIGR02254       175 MIGDSL  180 (224)
T ss_pred             EECCCc
Confidence            999986

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=96.41  E-value=0.0015  Score=56.36  Aligned_cols=80  Identities=23%  Similarity=0.248  Sum_probs=63.4

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee-------eCCceeeeccccCCCCC
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-------ADGEYLKDLTILGRDLA  253 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~-------~~g~~iKDLs~Lgrdl~  253 (297)
                      ++..||+.++|+.|.  +.++|.|++...++..+++.++-. .+|+..+..+....       ....|.+-+.++|.+++
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            446799999999997  689999999999999999998654 37887777554322       22345666777899999


Q ss_pred             cEEEEECCCc
Q 022460          254 RIAIVDNTPQ  263 (297)
Q Consensus       254 ~vVIIDDsp~  263 (297)
                      ++++|+|++.
T Consensus       160 ~~l~vgD~~~  169 (184)
T TIGR01993       160 RAIFFDDSAR  169 (184)
T ss_pred             ceEEEeCCHH
Confidence            9999999973

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=96.38  E-value=0.0048  Score=52.73  Aligned_cols=100  Identities=14%  Similarity=0.077  Sum_probs=64.8

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.++||+||||+--...          ...+ ....-++..+|+.  -++++.+ .+.++|-|+..+..+..+++.+.-.
T Consensus         2 ~~~~~D~Dgtl~~~~~~----------~~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~   68 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIY----------YTNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT   68 (154)
T ss_pred             eEEEEeCceeEEcCeEE----------ECCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence            46899999999942110          0001 1122335677876  6888875 5899999999999999999988655


Q ss_pred             CceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCC
Q 022460          222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      . +|...      ......+.+-+..+|.+.++++.|-|+.
T Consensus        69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~  102 (154)
T TIGR01670        69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDL  102 (154)
T ss_pred             E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            3 44421      1111122333455677888999998886

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=96.29  E-value=0.004  Score=54.51  Aligned_cols=83  Identities=17%  Similarity=0.143  Sum_probs=65.3

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .+..+||+.++|+.+.+ .+.++|.|++.+.++..+++.++-.+ +|...+..+.....+   ..+.+-++.+|.+.+++
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~  161 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM  161 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence            35789999999999985 49999999999999999999987654 677666555432222   13566677889999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      ++|+|++.
T Consensus       162 ~~igDs~~  169 (213)
T TIGR01449       162 VYVGDSRV  169 (213)
T ss_pred             EEeCCCHH
Confidence            99999973

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=96.24  E-value=0.0068  Score=62.23  Aligned_cols=109  Identities=15%  Similarity=0.121  Sum_probs=71.0

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcc----------
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS----------  208 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~----------  208 (297)
                      .+.+.+.||+||||+.....      ..++.    ....+ ..+-|++.+.|+.|.+ -|.|+|+|+...          
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg------~~~~~----~~~d~-~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~  234 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSG------KVFPK----GPDDW-QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD  234 (526)
T ss_pred             ccCcEEEEECCCCccccCCC------ccCCC----CHHHe-eecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence            45679999999999965321      00100    01111 2246999999999986 599999999776          


Q ss_pred             --ccHHHHHHhhcCCCceeeeEEeccCeeeeC---Ccee---eecc-ccCCCCCcEEEEECCC
Q 022460          209 --IYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYL---KDLT-ILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 --~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~i---KDLs-~Lgrdl~~vVIIDDsp  262 (297)
                        ..+..+++.++-   .|...+..+.|.+..   |.+.   +++. .++.++++.++|-|+.
T Consensus       235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa  294 (526)
T TIGR01663       235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA  294 (526)
T ss_pred             HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence              357778887754   366555555554432   3322   3332 2357889999999987

Note that the EC number for the kinase function is: 2.7.1.78

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=96.24  E-value=0.0056  Score=54.11  Aligned_cols=83  Identities=16%  Similarity=0.155  Sum_probs=67.6

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...||+.++|+++.+ .+.++|.|++.+.++..+++.++-.. +|+..+..+.+...+   ..+.+-+..+|-+.+++
T Consensus        80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~  158 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA  158 (214)
T ss_pred             hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence            45688999999999985 58999999999999999999987764 788888776654322   24556667788889999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      ++|+|++.
T Consensus       159 ~~iGDs~~  166 (214)
T PRK13288        159 LMVGDNHH  166 (214)
T ss_pred             EEECCCHH
Confidence            99999973

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=96.22  E-value=0.0041  Score=57.90  Aligned_cols=82  Identities=12%  Similarity=0.169  Sum_probs=68.3

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+ .+.++|-|++.+.++..+++.+.-.+ +|+..+..+.+...+.   .|.+-+.++|.+.+++|
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l  186 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI  186 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence            5678999999999986 49999999999999999999987654 7888888776543322   46777888899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       187 ~IgDs~~  193 (260)
T PLN03243        187 VFGNSNS  193 (260)
T ss_pred             EEcCCHH
Confidence            9999973

>PRK09449 dUMP phosphatase; Provisional

Probab=96.16  E-value=0.0056  Score=54.31  Aligned_cols=82  Identities=17%  Similarity=0.163  Sum_probs=66.0

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCC-CCCcEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGR-DLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgr-dl~~vV  256 (297)
                      +...||+.++|++|.+.+.+.|-|++.+.++..+++.+.-.+ +|+..+..+.+...+   ..|.+-++.+|. +.++++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  172 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL  172 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            567899999999999889999999999999999999877654 788888777654332   245667778885 457899


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       173 ~vgD~~~  179 (224)
T PRK09449        173 MVGDNLH  179 (224)
T ss_pred             EEcCCcH
Confidence            9999973

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=96.14  E-value=0.0052  Score=56.24  Aligned_cols=81  Identities=14%  Similarity=0.191  Sum_probs=68.0

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+++.+ .+.+.|-|++.+.++..+++.++-.. +|+..+..+.+...+   ..|.+-+.++|.+.++++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l  185 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF  185 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence            5678999999999965 59999999999999999999998764 798888877654332   246677788899999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      +|.|++
T Consensus       186 ~vgDs~  191 (248)
T PLN02770        186 VFEDSV  191 (248)
T ss_pred             EEcCCH
Confidence            999998

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=96.12  E-value=0.0051  Score=53.62  Aligned_cols=81  Identities=16%  Similarity=0.198  Sum_probs=64.7

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+++.+. |.++|.|++...++..+++.+.-. .+|+..+..+.....   ...|.+=++.+|.++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~  169 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL  169 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            45789999999999986 999999999999999999987643 368877776654322   2245566677899999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      +|+|++
T Consensus       170 ~vgD~~  175 (198)
T TIGR01428       170 FVASNP  175 (198)
T ss_pred             EEeCCH
Confidence            999997

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=96.07  E-value=0.0076  Score=52.91  Aligned_cols=83  Identities=17%  Similarity=0.090  Sum_probs=66.4

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...||+.++|+++.+ .+.++|.|.+...++..+++.++-.+ +|+..+..+++...   ...+.+-+.++|-+.+++
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  151 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA  151 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence            35678999999999975 59999999999999999999988765 78877776654322   223555666788889999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      ++|+|++.
T Consensus       152 l~igD~~~  159 (205)
T TIGR01454       152 VMVGDAVT  159 (205)
T ss_pred             EEEcCCHH
Confidence            99999973

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=96.00  E-value=0.02  Score=53.08  Aligned_cols=93  Identities=13%  Similarity=0.099  Sum_probs=55.5

Q ss_pred             CCCCcEEEEeCCcceeeeeccC-CCCCCc-----ee------eeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcC
Q 022460          139 AGLPITLVLDLDETLVHSSFDN-CKDADF-----SF------PIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTA  205 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~-~~~~d~-----~~------~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTa  205 (297)
                      .++++.+++|+|||+++++.-. .....|     .+      --.+. .....+....||+.+||+++. +-++|++-|+
T Consensus        60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~-~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTn  138 (237)
T PRK11009         60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMN-NGWDEFSIPKEVARQLIDMHVKRGDSIYFITG  138 (237)
T ss_pred             CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHH-hcccccCcchHHHHHHHHHHHHCCCeEEEEeC
Confidence            4567799999999999864310 000001     00      00000 111334556666999999995 5699999999


Q ss_pred             C----ccccHHHHHHhhcC-CCceeeeEEecc
Q 022460          206 G----QSIYAGQLLDILDP-NQTLIGQRVYRD  232 (297)
Q Consensus       206 s----~~~YA~~Il~~LDP-~~~~f~~rL~Rd  232 (297)
                      .    ...+++.+++.+.- ...+|...+..+
T Consensus       139 R~~~k~~~t~~~Llk~~gip~~~~f~vil~gd  170 (237)
T PRK11009        139 RTATKTETVSKTLADDFHIPADNMNPVIFAGD  170 (237)
T ss_pred             CCCcccHHHHHHHHHHcCCCcccceeEEEcCC
Confidence            5    35588888886644 223565444444

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=95.98  E-value=0.0044  Score=57.19  Aligned_cols=83  Identities=17%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC---------eeeeCCceeeeccccCCC
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS---------CVFADGEYLKDLTILGRD  251 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~---------C~~~~g~~iKDLs~Lgrd  251 (297)
                      ++.-|-|++||-.|.+.+ -++||.|.+..|..+|++|.-.. +|...++-+-         |......|-|-++..|-+
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~  176 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID  176 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence            778889999999999887 89999999999999999997775 6877777332         333334455555666776


Q ss_pred             -CCcEEEEECCCccc
Q 022460          252 -LARIAIVDNTPQVY  265 (297)
Q Consensus       252 -l~~vVIIDDsp~~~  265 (297)
                       +.+++++||+....
T Consensus       177 ~p~~t~FfDDS~~NI  191 (244)
T KOG3109|consen  177 SPRNTYFFDDSERNI  191 (244)
T ss_pred             CcCceEEEcCchhhH
Confidence             99999999997543

>PRK08238 hypothetical protein; Validated

Probab=95.70  E-value=0.0075  Score=61.20  Aligned_cols=47  Identities=17%  Similarity=0.052  Sum_probs=39.3

Q ss_pred             EeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEecc
Q 022460          182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD  232 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd  232 (297)
                      ..+|++.++|+++.+ -+.++|-|++.+.+++++++.+.-    |+..+..+
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd  119 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASD  119 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCC
Confidence            478999999999975 589999999999999999999842    56555544

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=95.65  E-value=0.014  Score=51.34  Aligned_cols=83  Identities=18%  Similarity=0.179  Sum_probs=62.9

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      ....+||+.+||+.+.+ .+.++|.|++...++..+++.++-.+ +|...+..+.+...+   ..+.+-+.+++.+.+++
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  169 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM  169 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence            36689999999999986 59999999999999999999987654 576544444322111   12445566778899999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      |+|+|++.
T Consensus       170 i~igD~~~  177 (226)
T PRK13222        170 LFVGDSRN  177 (226)
T ss_pred             EEECCCHH
Confidence            99999973

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=95.49  E-value=0.017  Score=52.00  Aligned_cols=83  Identities=13%  Similarity=-0.027  Sum_probs=65.4

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...||+.++|+.+.+. +.+.|-|++...++..+++.++-.. +|...+..+.+...+   ..+.+-++++|-+.+++
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~  171 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC  171 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence            467899999999999865 8999999999999999999886554 677666655543222   23567777889999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      ++|+|++.
T Consensus       172 l~IGDs~~  179 (229)
T PRK13226        172 VYVGDDER  179 (229)
T ss_pred             EEeCCCHH
Confidence            99999974

>PRK11587 putative phosphatase; Provisional

Probab=95.47  E-value=0.024  Score=50.48  Aligned_cols=82  Identities=16%  Similarity=0.113  Sum_probs=61.9

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...||+.++|+.+.+ .+.++|-|++...++..+++...- . ++...+..++....+   ..|.+-+..+|..++++
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~  158 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-P-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC  158 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-C-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence            35679999999999975 599999999998888877776643 2 355555555433222   24677778889999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      |+|+|++.
T Consensus       159 l~igDs~~  166 (218)
T PRK11587        159 VVVEDAPA  166 (218)
T ss_pred             EEEecchh
Confidence            99999983

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=95.46  E-value=0.0075  Score=54.62  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=70.9

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.+||+.|... .-+.+-|++.+..+..+++.+.-.+ +|...+++++....+   ..|++-..+||.+++++|
T Consensus        85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv  163 (221)
T COG0637          85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV  163 (221)
T ss_pred             CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence            67899999999999987 9999999999999999999988775 799988877655433   258899999999999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      +|+|++
T Consensus       164 viEDs~  169 (221)
T COG0637         164 VVEDSP  169 (221)
T ss_pred             EEecch
Confidence            999998

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=95.46  E-value=0.012  Score=52.32  Aligned_cols=82  Identities=12%  Similarity=0.115  Sum_probs=66.1

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      ....||+.++|+.+.+ .+.++|.|++...+++.+++.+.-.+ +|+..+..+.....+.   .+.+-++.+|.+.++++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4678999999999985 59999999999999999999987654 7887777665432222   45666777899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       170 ~igDs~~  176 (222)
T PRK10826        170 ALEDSFN  176 (222)
T ss_pred             EEcCChh
Confidence            9999984

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=95.46  E-value=0.0095  Score=50.86  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+. +.++|-|++  .+++.+++.+.-.+ +|+..+..+.....+   ..|.+-+.++|.+.+++|
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            56899999999999864 899999987  78899998876553 788777766543322   234555667788899999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       164 ~IgD~~~  170 (185)
T TIGR02009       164 VFEDALA  170 (185)
T ss_pred             EEeCcHh
Confidence            9999963

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=95.42  E-value=0.015  Score=54.88  Aligned_cols=93  Identities=17%  Similarity=0.073  Sum_probs=55.3

Q ss_pred             CCCcEEEEeCCcceeeeecc----CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHH
Q 022460          140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQL  214 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~I  214 (297)
                      .+++.+|||+|||++..+.-    ......|.-. .+..-....-...-||+.+||+.+.+ -..|+|.|.....+.+..
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~-~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T  151 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPE-TWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT  151 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCCHH-HHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence            35789999999999976521    0011111000 00000001124467999999999975 489999999987777755


Q ss_pred             HHhhcCCC---ceeeeEEeccC
Q 022460          215 LDILDPNQ---TLIGQRVYRDS  233 (297)
Q Consensus       215 l~~LDP~~---~~f~~rL~Rd~  233 (297)
                      ++.|...|   ..+++.+.|+.
T Consensus       152 ~~~Lkk~Gi~~~~~d~lllr~~  173 (266)
T TIGR01533       152 LKNLKRFGFPQADEEHLLLKKD  173 (266)
T ss_pred             HHHHHHcCcCCCCcceEEeCCC
Confidence            55554443   12356666753

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.37  E-value=0.03  Score=50.95  Aligned_cols=66  Identities=15%  Similarity=0.063  Sum_probs=49.7

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHH--HHHHhh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAG--QLLDIL  218 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~--~Il~~L  218 (297)
                      -..+++|+||||++..                        ..-||+.++|++|.+ .+.++|.|++.+..++  +.++.+
T Consensus         8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~   63 (242)
T TIGR01459         8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL   63 (242)
T ss_pred             CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence            3478999999998742                        247999999999986 5899999999888776  677777


Q ss_pred             cCCCceeeeEEec
Q 022460          219 DPNQTLIGQRVYR  231 (297)
Q Consensus       219 DP~~~~f~~rL~R  231 (297)
                      .-....|...+..
T Consensus        64 gl~~~~~~~Ii~s   76 (242)
T TIGR01459        64 GINADLPEMIISS   76 (242)
T ss_pred             CCCccccceEEcc
Confidence            6543145554443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=95.35  E-value=0.04  Score=47.52  Aligned_cols=81  Identities=14%  Similarity=0.186  Sum_probs=58.3

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC-eeeeCCc------------eeeecc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-CVFADGE------------YLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~-C~~~~g~------------~iKDLs  246 (297)
                      +..+||+.++|+.+.+ -+.++|.|++...+++.+++.+.... +|...+..+. -......            +.+-+.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~  157 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR  157 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence            5689999999999985 59999999999999999999987653 6665554332 1111111            111133


Q ss_pred             ccCCCCCcEEEEECCC
Q 022460          247 ILGRDLARIAIVDNTP  262 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp  262 (297)
                      .+|.+.+++++|.|+.
T Consensus       158 ~~~~~~~~~i~iGDs~  173 (201)
T TIGR01491       158 ELNPSLTETVAVGDSK  173 (201)
T ss_pred             HhCCCHHHEEEEcCCH
Confidence            4577889999999996

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=95.28  E-value=0.019  Score=52.21  Aligned_cols=82  Identities=15%  Similarity=-0.011  Sum_probs=64.0

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCcee-eeEEeccCeeeeC---CceeeeccccCC-CCCc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFAD---GEYLKDLTILGR-DLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f-~~rL~Rd~C~~~~---g~~iKDLs~Lgr-dl~~  254 (297)
                      +...||+.++|+.+.+ .+.+.|-|++...+++.+++.+.-.+ +| +..+..+.....+   ..|.+-+.++|. +.++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            5678999999999986 49999999999999999999987665 44 6666666533222   245677778887 4899


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|+|.|++.
T Consensus       177 ~l~IGDs~~  185 (253)
T TIGR01422       177 CVKVGDTVP  185 (253)
T ss_pred             eEEECCcHH
Confidence            999999983

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=95.18  E-value=0.021  Score=56.55  Aligned_cols=82  Identities=10%  Similarity=0.091  Sum_probs=68.6

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.+||+.|.+ .+.+.|-|++.+.+++.+++.+.-.. +|+..+..+++...+.   .|.+-+..+|.+.+++|
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl  293 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI  293 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            4568999999999976 59999999999999999999987654 8998888887653322   46677788899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|.|++.
T Consensus       294 ~IGDS~~  300 (381)
T PLN02575        294 VFGNSNQ  300 (381)
T ss_pred             EEcCCHH
Confidence            9999873

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=95.15  E-value=0.016  Score=50.81  Aligned_cols=85  Identities=13%  Similarity=0.116  Sum_probs=62.3

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~v  255 (297)
                      +...+||+.++|+.+.+ .+.++|-|++....+..++.....-..+|+..+..+.+...+.   .|.+-++.+|.+++++
T Consensus        82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            34579999999999986 5999999999887766554432111346777777666544322   4667778889999999


Q ss_pred             EEEECCCcc
Q 022460          256 AIVDNTPQV  264 (297)
Q Consensus       256 VIIDDsp~~  264 (297)
                      ++|||++..
T Consensus       162 l~vgD~~~d  170 (199)
T PRK09456        162 VFFDDNADN  170 (199)
T ss_pred             EEeCCCHHH
Confidence            999999853

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=95.03  E-value=0.017  Score=49.57  Aligned_cols=81  Identities=16%  Similarity=0.193  Sum_probs=64.0

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..-|++ +.|+.+.+.+.++|-|++.+.+++.+++.+.-.+ +|+..+..+++...+.   .+.+-++++|.+.+++|+
T Consensus        87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  164 (188)
T PRK10725         87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV  164 (188)
T ss_pred             CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            3455764 8899998778999999999999999999987654 7988888776543332   356667778988999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       165 igDs~~  170 (188)
T PRK10725        165 FEDADF  170 (188)
T ss_pred             EeccHh
Confidence            999864

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=94.97  E-value=0.032  Score=48.71  Aligned_cols=79  Identities=11%  Similarity=0.008  Sum_probs=59.8

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...||+.++|+++.+. +.++|.|++... +..+++.+.-. .+|+..+..+.+...+.   .+.+-++.+|.+.+++|+
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  182 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH  182 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence            5789999999999865 999999998765 46777776544 36877776555433222   356667788999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       183 IgD~~  187 (203)
T TIGR02252       183 IGDSL  187 (203)
T ss_pred             ECCCc
Confidence            99986

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=94.84  E-value=0.031  Score=52.12  Aligned_cols=82  Identities=12%  Similarity=0.091  Sum_probs=62.7

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+||+.++|+.+.+ .+.++|.|++...++..+++.+.-. .+|...+..+.+.....   .+.+=+.++|.+.+++|
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            4578999999999975 6999999999999999999987654 36776665554332211   24455566788999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       179 ~IGD~~~  185 (272)
T PRK13223        179 FVGDSRS  185 (272)
T ss_pred             EECCCHH
Confidence            9999973

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=94.77  E-value=0.041  Score=48.31  Aligned_cols=102  Identities=16%  Similarity=0.054  Sum_probs=60.6

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      ..+.+|+|+||||+........          .+.....+.. |.+  .=++.+. +.++++|-|......+..+++.+.
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~~----------~~~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lg   86 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMGN----------NGEELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLG   86 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEcC----------CCCEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcC
Confidence            4679999999999975210000          1111111211 221  1223333 569999999999999999999986


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCC
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      -.. +|.      .+......+.+-+..+|.+.+.++.|-|++
T Consensus        87 l~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~  122 (183)
T PRK09484         87 ITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL  122 (183)
T ss_pred             Cce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCH
Confidence            442 343      111111123344456688888999998886

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=94.73  E-value=0.076  Score=42.57  Aligned_cols=54  Identities=22%  Similarity=0.189  Sum_probs=40.2

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ  222 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~  222 (297)
                      +++|+||||++..                        ..=||+.+||+++.+. ..+++.|.++..-...+.+.|---|
T Consensus         1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G   55 (101)
T PF13344_consen    1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG   55 (101)
T ss_dssp             EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred             CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence            5899999999831                        1359999999999975 9999999998776666666664333

...

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=94.72  E-value=0.042  Score=48.04  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=62.2

Q ss_pred             eCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee--CCceeeeccccCCCCCcEEEEE
Q 022460          183 QRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA--DGEYLKDLTILGRDLARIAIVD  259 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~--~g~~iKDLs~Lgrdl~~vVIID  259 (297)
                      ..|+..++|+.+.+. +.++|.|++.+.+++.+++.+.-. .+|+..+..++....  ...+.+-+..+|-+.+++|+|.
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG  185 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG  185 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence            455679999999864 999999999999999999998765 478877776654321  1234566677898999999999


Q ss_pred             CCC
Q 022460          260 NTP  262 (297)
Q Consensus       260 Dsp  262 (297)
                      |++
T Consensus       186 D~~  188 (197)
T TIGR01548       186 DTV  188 (197)
T ss_pred             CCH
Confidence            987

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=94.65  E-value=0.06  Score=46.69  Aligned_cols=50  Identities=22%  Similarity=0.246  Sum_probs=33.5

Q ss_pred             cEEEEeCCcceeeeeccCC---CCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC
Q 022460          143 ITLVLDLDETLVHSSFDNC---KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG  206 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~---~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas  206 (297)
                      +.+.+|||||||.......   ...||              ...-|++-+-|+++.+ -|.|||+|.-
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~--------------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ   54 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDW--------------KFFPPGVPEALRELHKKGYKIVIVTNQ   54 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGG--------------EEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHh--------------hhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence            4689999999998754211   11122              3356789999999986 6999999986

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=94.64  E-value=0.023  Score=50.00  Aligned_cols=83  Identities=17%  Similarity=0.064  Sum_probs=57.5

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCcccc--HHHHHHhhcCCCceeeeEEeccCeeee---CCceeeeccccCCCCC
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY--AGQLLDILDPNQTLIGQRVYRDSCVFA---DGEYLKDLTILGRDLA  253 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y--A~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~  253 (297)
                      .+...||+.++|+.|.+ .+.++|.|++...+  +...+..+.- ..+|+..+..+.+...   ...|.+-++++|.+.+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l-~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~  170 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDI-MALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE  170 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhh-HhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence            35678999999999986 59999999987655  3222222222 2467776655443322   2246677788899999


Q ss_pred             cEEEEECCCc
Q 022460          254 RIAIVDNTPQ  263 (297)
Q Consensus       254 ~vVIIDDsp~  263 (297)
                      ++++|||++.
T Consensus       171 ~~l~i~D~~~  180 (211)
T TIGR02247       171 ECVFLDDLGS  180 (211)
T ss_pred             HeEEEcCCHH
Confidence            9999999874

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=94.63  E-value=0.058  Score=44.87  Aligned_cols=79  Identities=15%  Similarity=0.015  Sum_probs=60.3

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .....||+.++|+.+.+ .+.++|.|++.+..+..+++.+ - ..+|...+..++.. .+   ..+.+-++++|.+. ++
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~  137 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV  137 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence            34456999999999964 5899999999999999999985 2 24677766666543 22   23556667778887 99


Q ss_pred             EEEECCC
Q 022460          256 AIVDNTP  262 (297)
Q Consensus       256 VIIDDsp  262 (297)
                      ++|.|++
T Consensus       138 l~iGDs~  144 (154)
T TIGR01549       138 LHVGDNL  144 (154)
T ss_pred             EEEeCCH
Confidence            9999986

HAD subfamilies caused by an overly broad single model.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=94.60  E-value=0.027  Score=49.75  Aligned_cols=82  Identities=17%  Similarity=0.153  Sum_probs=63.3

Q ss_pred             EEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCC-CceeeeEEeccCeeee---CCceeeeccccCCC-CCc
Q 022460          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYRDSCVFA---DGEYLKDLTILGRD-LAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~-~~~f~~rL~Rd~C~~~---~g~~iKDLs~Lgrd-l~~  254 (297)
                      ....||+.++|+++. +.+.+.|-|++...++..+++.+.-. +.+|...+..+.-...   ...+.+=+.++|.. .++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  165 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS  165 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence            468999999999997 56999999999999999999998754 2578776665542111   12345556777876 689


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      +++|+|++
T Consensus       166 ~~~igD~~  173 (220)
T TIGR03351       166 VAVAGDTP  173 (220)
T ss_pred             eEEeCCCH
Confidence            99999997

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.54  E-value=0.044  Score=48.23  Aligned_cols=84  Identities=14%  Similarity=0.093  Sum_probs=69.5

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+.+.|.++|.|.+...++...+..+- =..+|+..++.+.....+   ..|..-+..+|-++++++.
T Consensus        98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~  176 (229)
T COG1011          98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF  176 (229)
T ss_pred             CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence            678899999999999889999999999999999999986 345899999887765433   2355667778989999999


Q ss_pred             EECCCccc
Q 022460          258 VDNTPQVY  265 (297)
Q Consensus       258 IDDsp~~~  265 (297)
                      |||+...-
T Consensus       177 VgD~~~~d  184 (229)
T COG1011         177 VGDSLEND  184 (229)
T ss_pred             ECCChhhh
Confidence            99998654

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=94.54  E-value=0.034  Score=49.08  Aligned_cols=82  Identities=13%  Similarity=0.194  Sum_probs=59.2

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee--------e----CC-ceeeecc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--------A----DG-EYLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~--------~----~g-~~iKDLs  246 (297)
                      +..+||+.+||+.+.+ .+.++|-|++...++..+++.+.-.. +|...+.-++..+        .    ++ .+.+=++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~  162 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR  162 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence            4689999999999997 59999999999999999999986554 5655443221110        0    11 1233344


Q ss_pred             ccCCCCCcEEEEECCCc
Q 022460          247 ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp~  263 (297)
                      +++.+.++++.|.|++.
T Consensus       163 ~~~~~~~~~i~iGDs~~  179 (219)
T TIGR00338       163 KEGISPENTVAVGDGAN  179 (219)
T ss_pred             HcCCCHHHEEEEECCHH
Confidence            56888899999999963

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PHA02597 30

Probab=94.52  E-value=0.028  Score=49.04  Aligned_cols=81  Identities=12%  Similarity=0.065  Sum_probs=54.0

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCC---ceeeeEEeccCeeeeCCceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ---TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~---~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...||+.++|+.|.+.+.+++-|++.......+++.+.-.+   .+|+..+..+........+.+-++++|  .+.+|+
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~  150 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF  150 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence            568999999999999888777777665555544665553221   145666665554332233445556667  678999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |||++.
T Consensus       151 vgDs~~  156 (197)
T PHA02597        151 VDDLAH  156 (197)
T ss_pred             eCCCHH
Confidence            999974

2 hypothetical protein; Provisional

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=94.34  E-value=0.035  Score=52.10  Aligned_cols=82  Identities=11%  Similarity=0.047  Sum_probs=60.5

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD  259 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIID  259 (297)
                      +...||+.++|+.|.+ .+.+.|.|++.+.++..+++.++-.. +|+..+..+........+.+-+.+++.+.+++++|+
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG  219 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG  219 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence            4567999999999985 58999999999999999999997654 677655433211111123344455677889999999


Q ss_pred             CCCc
Q 022460          260 NTPQ  263 (297)
Q Consensus       260 Dsp~  263 (297)
                      |++.
T Consensus       220 Ds~~  223 (273)
T PRK13225        220 DETR  223 (273)
T ss_pred             CCHH
Confidence            9973

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=94.21  E-value=0.12  Score=47.17  Aligned_cols=58  Identities=24%  Similarity=0.162  Sum_probs=49.3

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||+....                       ..+|...+.|+++. +-..++|-|......+.++++.|..
T Consensus         3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~   59 (264)
T COG0561           3 IKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL   59 (264)
T ss_pred             eeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence            57899999999998632                       16889999999884 6799999999999999999999988


Q ss_pred             CC
Q 022460          221 NQ  222 (297)
Q Consensus       221 ~~  222 (297)
                      .+
T Consensus        60 ~~   61 (264)
T COG0561          60 DG   61 (264)
T ss_pred             Cc
Confidence            75

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=94.02  E-value=0.06  Score=50.68  Aligned_cols=82  Identities=13%  Similarity=0.155  Sum_probs=59.2

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc--CCCceeeeEEeccCeeeeC---CceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD--PNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD--P~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~  254 (297)
                      +...||+.++|+.+.+ .+.++|-|++...++..+++.+.  ....+|... ..+.+...+   ..+.+-+..+|.+.++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            4689999999999986 59999999999999999998763  111223222 334332211   1355666778999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|+|+|++.
T Consensus       222 ~l~IGDs~~  230 (286)
T PLN02779        222 CVVVEDSVI  230 (286)
T ss_pred             EEEEeCCHH
Confidence            999999973

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=93.99  E-value=0.11  Score=49.40  Aligned_cols=84  Identities=18%  Similarity=0.252  Sum_probs=58.7

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh---cCCCceeeeEEeccCeeeeCC---c----eee-----
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL---DPNQTLIGQRVYRDSCVFADG---E----YLK-----  243 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L---DP~~~~f~~rL~Rd~C~~~~g---~----~iK-----  243 (297)
                      -+..|||+.+|+++|.+. ..++|+|+|...+++.+++.+   ++....++.++--+......|   .    +-|     
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~  198 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA  198 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence            377899999999999764 899999999999999999964   344456666665422112212   1    112     


Q ss_pred             --eccccC--CCCCcEEEEECCCc
Q 022460          244 --DLTILG--RDLARIAIVDNTPQ  263 (297)
Q Consensus       244 --DLs~Lg--rdl~~vVIIDDsp~  263 (297)
                        ..+.++  .+.+++|+|-|+..
T Consensus       199 ~~~~~~~~~~~~~~~vI~vGDs~~  222 (277)
T TIGR01544       199 LRNTEYFNQLKDRSNIILLGDSQG  222 (277)
T ss_pred             HHHHHHhCccCCcceEEEECcChh
Confidence              112235  67789999999974

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PLN02940 riboflavin kinase

Probab=93.99  E-value=0.039  Score=54.23  Aligned_cols=82  Identities=7%  Similarity=0.064  Sum_probs=65.5

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHH-hhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLD-ILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~-~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      +...||+.++|++|.+. +.+.|-|++.+.++..+++ ..+=. .+|+..+..+++...+   ..+.+-++.+|-+.+++
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~  170 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC  170 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence            45789999999999765 8999999999999998887 45433 4788888888765332   24567777889899999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      |+|+|++.
T Consensus       171 l~VGDs~~  178 (382)
T PLN02940        171 LVIEDSLP  178 (382)
T ss_pred             EEEeCCHH
Confidence            99999974

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=93.99  E-value=0.077  Score=48.83  Aligned_cols=83  Identities=16%  Similarity=0.031  Sum_probs=63.1

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCC-CCcE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRD-LARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrd-l~~v  255 (297)
                      +..-||+.++|+.+.+ .+.++|-|++.+..+..+++.+.-.+-+++..+..++....+   ..|.+-++++|-. .+.+
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~  179 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC  179 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence            4678999999999975 599999999999999999998765542246666666543222   2456777788874 6899


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      |+|.|++.
T Consensus       180 l~IGDs~~  187 (267)
T PRK13478        180 VKVDDTVP  187 (267)
T ss_pred             EEEcCcHH
Confidence            99999983

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=93.85  E-value=0.11  Score=46.37  Aligned_cols=47  Identities=11%  Similarity=0.187  Sum_probs=39.9

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceee
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIG  226 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~  226 (297)
                      .+..|||+.+||+.+.+. ..++|.|++...|++++++.+.+...++.
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~  115 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYC  115 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEe
Confidence            367999999999999874 99999999999999999999865443444

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.84  E-value=0.14  Score=47.35  Aligned_cols=57  Identities=19%  Similarity=0.115  Sum_probs=45.8

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||+....                       ...|...+.|+.+.+. ..++|-|......+..+++.++-
T Consensus         4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l   60 (273)
T PRK00192          4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL   60 (273)
T ss_pred             ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence            46899999999997411                       1357788999999875 89999999888889999998864


Q ss_pred             C
Q 022460          221 N  221 (297)
Q Consensus       221 ~  221 (297)
                      .
T Consensus        61 ~   61 (273)
T PRK00192         61 E   61 (273)
T ss_pred             C
Confidence            4

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=93.81  E-value=0.029  Score=49.69  Aligned_cols=82  Identities=7%  Similarity=0.014  Sum_probs=61.6

Q ss_pred             EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceee-eEEeccCeeee---CCceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVFA---DGEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~-~rL~Rd~C~~~---~g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...||+.++|+.+.  +.++|.|++.+.+++.+++..+-.. +|. ..+..++....   ...|.+-+.++|.+++++
T Consensus        86 ~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~  162 (221)
T PRK10563         86 ELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC  162 (221)
T ss_pred             cCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence            3567899999999994  8999999999999999998876654 675 34444332221   224566677788889999


Q ss_pred             EEEECCCcc
Q 022460          256 AIVDNTPQV  264 (297)
Q Consensus       256 VIIDDsp~~  264 (297)
                      |+|+|++.-
T Consensus       163 l~igDs~~d  171 (221)
T PRK10563        163 ILVDDSSAG  171 (221)
T ss_pred             EEEeCcHhh
Confidence            999999843

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=93.64  E-value=0.17  Score=45.22  Aligned_cols=83  Identities=13%  Similarity=0.131  Sum_probs=54.7

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe--ccCeeee------------CC-ceeee
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY--RDSCVFA------------DG-EYLKD  244 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~--Rd~C~~~------------~g-~~iKD  244 (297)
                      +..|||+.+||+++.+ .+.++|.|++...|++++++.+-+...++...+.  .+.....            .| ...+-
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~  152 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL  152 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence            6789999999999985 5999999999999999999986222223432221  1111100            00 01233


Q ss_pred             ccccCCCCCcEEEEECCCc
Q 022460          245 LTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       245 Ls~Lgrdl~~vVIIDDsp~  263 (297)
                      +..++.+..++|.|-|+..
T Consensus       153 l~~~~~~~~~~i~iGDs~~  171 (219)
T PRK09552        153 IRKLSDTNDFHIVIGDSIT  171 (219)
T ss_pred             HHHhccCCCCEEEEeCCHH
Confidence            3445667789999999963

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=93.45  E-value=0.11  Score=46.41  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=71.7

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc----cc-------
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ----SI-------  209 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~----~~-------  209 (297)
                      .+.|+||.||||+--..      ++.-.+        --....||+-+=|..+.+ -|.+||+|.-+    ..       
T Consensus         5 ~k~lflDRDGtin~d~~------~yv~~~--------~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~   70 (181)
T COG0241           5 QKALFLDRDGTINIDKG------DYVDSL--------DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD   70 (181)
T ss_pred             CcEEEEcCCCceecCCC------cccCcH--------HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence            67999999999985211      111110        013478999999999975 59999999832    22       


Q ss_pred             -cHHHHHHhhcCCCceeeeEEeccC-----eeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          210 -YAGQLLDILDPNQTLIGQRVYRDS-----CVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       210 -YA~~Il~~LDP~~~~f~~rL~Rd~-----C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                       +-..+++.|--.|--|+.+++-.|     |.+.+   |.+..=+...+.|+++.++|=|+.
T Consensus        71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~  132 (181)
T COG0241          71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL  132 (181)
T ss_pred             HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcH
Confidence             233366666666667899998332     55543   445555556678999999998884

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=93.25  E-value=0.12  Score=45.08  Aligned_cols=52  Identities=27%  Similarity=0.232  Sum_probs=40.9

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      |++||||||++...                       ..-|...+.|+.+. +-..+++-|.-....+..++..+.
T Consensus         1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~   53 (254)
T PF08282_consen    1 IFSDLDGTLLNSDG-----------------------KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELG   53 (254)
T ss_dssp             EEEECCTTTCSTTS-----------------------SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTT
T ss_pred             cEEEECCceecCCC-----------------------eeCHHHHHHHHhhcccceEEEEEccCccccccccccccc
Confidence            68999999998421                       14577888888887 568899999888888888888664

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=93.24  E-value=0.083  Score=45.00  Aligned_cols=80  Identities=13%  Similarity=0.108  Sum_probs=57.9

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee---eCCceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF---ADGEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~---~~g~~iKDLs~Lgrdl~~vV  256 (297)
                      ....||+.++|++|.+ .+.+.|-|++.  .+..+++.+.-.. +|+..+..+.-..   ....|.+-+++++.+.+++|
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v  162 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI  162 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            3578999999999985 48999988753  4677888886553 6877665443111   11235666777888999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       163 ~vgD~~~  169 (185)
T TIGR01990       163 GIEDAQA  169 (185)
T ss_pred             EEecCHH
Confidence            9999973

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=93.09  E-value=0.24  Score=43.87  Aligned_cols=57  Identities=14%  Similarity=0.135  Sum_probs=44.8

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+....                       ...|...+-|+++.+. ..+++-|.-....+.++++.|+..
T Consensus         2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487         2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS   58 (215)
T ss_pred             cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence            4789999999996311                       2467777888888765 889999998888888898888776


Q ss_pred             C
Q 022460          222 Q  222 (297)
Q Consensus       222 ~  222 (297)
                      +
T Consensus        59 ~   59 (215)
T TIGR01487        59 G   59 (215)
T ss_pred             C
Confidence            4

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PLN02811 hydrolase

Probab=93.00  E-value=0.073  Score=47.51  Aligned_cols=82  Identities=11%  Similarity=0.081  Sum_probs=57.7

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHH-HHHhhcCCCceeeeEEecc--Ceeee---CCceeeeccccC---C
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQ-LLDILDPNQTLIGQRVYRD--SCVFA---DGEYLKDLTILG---R  250 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~-Il~~LDP~~~~f~~rL~Rd--~C~~~---~g~~iKDLs~Lg---r  250 (297)
                      +...||+.++|+.|.+ .+.+.|-|++.+.++.. +.+...-. .+|+..+..+  .+...   ...|.+=+..+|   .
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~  155 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV  155 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence            4568999999999986 59999999998776554 33322222 3677777777  44322   224556666665   8


Q ss_pred             CCCcEEEEECCCc
Q 022460          251 DLARIAIVDNTPQ  263 (297)
Q Consensus       251 dl~~vVIIDDsp~  263 (297)
                      +.+.+|+|+|++.
T Consensus       156 ~~~~~v~IgDs~~  168 (220)
T PLN02811        156 DPGKVLVFEDAPS  168 (220)
T ss_pred             CccceEEEeccHh
Confidence            8899999999984

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=92.94  E-value=0.092  Score=48.01  Aligned_cols=84  Identities=14%  Similarity=0.107  Sum_probs=59.8

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC--CceeeeEEeccCee-eeCCceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN--QTLIGQRVYRDSCV-FADGEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~--~~~f~~rL~Rd~C~-~~~g~~iKDLs~Lgrdl~~v  255 (297)
                      .....|++.++|+++.+ .+.++|+|++...+...+++..+-.  ..+|+..+....+. .....|.+-+..+|-+++++
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~  172 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI  172 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence            35688999999999975 6899999999999888888775311  12454433211111 11234677778889999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      ++|+|++.
T Consensus       173 lfVgDs~~  180 (220)
T TIGR01691       173 LFLSDIIN  180 (220)
T ss_pred             EEEeCCHH
Confidence            99999973

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=92.90  E-value=0.23  Score=45.87  Aligned_cols=59  Identities=19%  Similarity=0.178  Sum_probs=42.6

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      +.++.+++||||||++...                       ..-|-..+-|+++.+. ..+++-|.-....+.++++.|
T Consensus         5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l   61 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL   61 (271)
T ss_pred             CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence            4677999999999998421                       0224455667777654 788888888888888888887


Q ss_pred             cCC
Q 022460          219 DPN  221 (297)
Q Consensus       219 DP~  221 (297)
                      ...
T Consensus        62 ~~~   64 (271)
T PRK03669         62 GLQ   64 (271)
T ss_pred             CCC
Confidence            643

>PTZ00445 p36-lilke protein; Provisional

Probab=92.81  E-value=0.17  Score=46.64  Aligned_cols=62  Identities=16%  Similarity=0.148  Sum_probs=43.0

Q ss_pred             CCCCcEEEEeCCccee--eeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcccc
Q 022460          139 AGLPITLVLDLDETLV--HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY  210 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLV--hs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y  210 (297)
                      ..+-+.+++|||.|||  |+-..-  +++        +....+.-..||.+..++++|.+ .+.|+|-|-|.+.-
T Consensus        40 ~~GIk~Va~D~DnTlI~~HsgG~~--~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~  104 (219)
T PTZ00445         40 ECGIKVIASDFDLTMITKHSGGYI--DPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL  104 (219)
T ss_pred             HcCCeEEEecchhhhhhhhccccc--CCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence            3577899999999997  553211  110        01112334579999999999986 69999999887744

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=92.77  E-value=0.066  Score=47.57  Aligned_cols=98  Identities=19%  Similarity=0.206  Sum_probs=67.9

Q ss_pred             CCCCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHH
Q 022460          135 REPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQ  213 (297)
Q Consensus       135 ~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~  213 (297)
                      ......+-+.+|+|||+|||--..                .      ..-|-+++-+..+... -.++|.|...+.-+..
T Consensus        21 ~~L~~~Gikgvi~DlDNTLv~wd~----------------~------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~   78 (175)
T COG2179          21 DILKAHGIKGVILDLDNTLVPWDN----------------P------DATPELRAWLAELKEAGIKVVVVSNNKESRVAR   78 (175)
T ss_pred             HHHHHcCCcEEEEeccCceecccC----------------C------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHh
Confidence            333457888999999999996321                0      1358899999999976 8999999999999999


Q ss_pred             HHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECC
Q 022460          214 LLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT  261 (297)
Q Consensus       214 Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDs  261 (297)
                      ++..||-..  +    ++-. ......+-|-|...+-+.++||.|=|.
T Consensus        79 ~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDq  119 (175)
T COG2179          79 AAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQ  119 (175)
T ss_pred             hhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcch
Confidence            999888663  1    1111 111122345556667777777777765

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=92.67  E-value=0.18  Score=44.55  Aligned_cols=95  Identities=19%  Similarity=0.179  Sum_probs=60.0

Q ss_pred             CCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCc---EEEEEcCCc-------
Q 022460          138 IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF---DVVIFTAGQ-------  207 (297)
Q Consensus       138 ~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~f---EIvIfTas~-------  207 (297)
                      ...+-+.||+|+|+||+....                      -..-|.+.+.++++.+.|   .|+|.|.+.       
T Consensus        37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~   94 (168)
T PF09419_consen   37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD   94 (168)
T ss_pred             hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence            456788999999999985321                      125688899999999865   399999984       


Q ss_pred             cccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeecccc-----CCCCCcEEEEECCC
Q 022460          208 SIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-----GRDLARIAIVDNTP  262 (297)
Q Consensus       208 ~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~L-----grdl~~vVIIDDsp  262 (297)
                      ..-|+.+-+.|.-.  .+.|+     +..- +.+-+=++.+     ....+++++|-|+-
T Consensus        95 ~~~a~~~~~~lgIp--vl~h~-----~kKP-~~~~~i~~~~~~~~~~~~p~eiavIGDrl  146 (168)
T PF09419_consen   95 GERAEALEKALGIP--VLRHR-----AKKP-GCFREILKYFKCQKVVTSPSEIAVIGDRL  146 (168)
T ss_pred             HHHHHHHHHhhCCc--EEEeC-----CCCC-ccHHHHHHHHhhccCCCCchhEEEEcchH
Confidence            45566666666522  22222     2211 2221112222     23578899998873

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=92.60  E-value=0.23  Score=45.10  Aligned_cols=52  Identities=19%  Similarity=0.257  Sum_probs=40.3

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      +++||||||++...                        .-|...++|+++.+. ..+++.|.-+...+..+++.+.-
T Consensus         2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~   54 (225)
T TIGR02461         2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV   54 (225)
T ss_pred             EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            68999999998310                        135688999999865 88888888887777788877753

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=92.53  E-value=0.36  Score=43.79  Aligned_cols=15  Identities=40%  Similarity=0.499  Sum_probs=12.9

Q ss_pred             CcEEEEeCCcceeee
Q 022460          142 PITLVLDLDETLVHS  156 (297)
Q Consensus       142 k~tLVLDLDeTLVhs  156 (297)
                      .+.+++||||||+..
T Consensus         3 ~kli~~DlDGTLl~~   17 (272)
T PRK10530          3 YRVIALDLDGTLLTP   17 (272)
T ss_pred             ccEEEEeCCCceECC
Confidence            468999999999975

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=92.50  E-value=0.25  Score=45.04  Aligned_cols=57  Identities=19%  Similarity=0.204  Sum_probs=42.0

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||++...                       ..-|...+-|+++.+. ..++|-|.-....+.++++.+..
T Consensus         3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   59 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM   59 (270)
T ss_pred             eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence            46899999999997521                       1345566777787765 78888888877778888888765


Q ss_pred             C
Q 022460          221 N  221 (297)
Q Consensus       221 ~  221 (297)
                      .
T Consensus        60 ~   60 (270)
T PRK10513         60 E   60 (270)
T ss_pred             C
Confidence            4

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=91.87  E-value=0.028  Score=47.81  Aligned_cols=75  Identities=13%  Similarity=0.047  Sum_probs=59.0

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..+||+.++|+.      ++|.|++...++..+++.+.-. .+|+..+..+.....+   ..|.+-++++|.+++++++
T Consensus        89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~  161 (175)
T TIGR01493        89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM  161 (175)
T ss_pred             CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence            4579999999993      7899999999999999998654 4687766665433222   2466777888999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       162 vgD~~  166 (175)
T TIGR01493       162 VAAHQ  166 (175)
T ss_pred             EecCh
Confidence            99996

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=91.76  E-value=0.18  Score=47.08  Aligned_cols=123  Identities=13%  Similarity=0.119  Sum_probs=76.2

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCce---e------------------eeee-cCceeeEEEEeCccHHHHHHHHhc-C
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFS---F------------------PIHS-KMEVQTVFVRQRPYLHMFLEAVAS-M  197 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~---~------------------~i~~-~~~~~~~~V~~RP~l~eFL~~ls~-~  197 (297)
                      ....+|+|+|+||+-.. .....+.|.   +                  .-.. -.....-+...=|.+-++++.+.+ .
T Consensus        19 ~~tLvvfDiDdTLi~~~-~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~   97 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPK-QPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG   97 (252)
T ss_pred             CCeEEEEEcchhhhcCc-cccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence            56789999999999654 222211110   0                  0000 000123345678999999999995 5


Q ss_pred             cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCe---------------eeeCCc-----------eeeeccccCCC
Q 022460          198 FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC---------------VFADGE-----------YLKDLTILGRD  251 (297)
Q Consensus       198 fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C---------------~~~~g~-----------~iKDLs~Lgrd  251 (297)
                      .-|+..|+..+.+...-++.|---|--|+...+++.-               .+.+|.           ...=|.++|+.
T Consensus        98 ~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~  177 (252)
T PF11019_consen   98 IPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQS  177 (252)
T ss_pred             CcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCC
Confidence            9999999999999999888874444333333211111               112221           12334567999


Q ss_pred             CCcEEEEECCCcc
Q 022460          252 LARIAIVDNTPQV  264 (297)
Q Consensus       252 l~~vVIIDDsp~~  264 (297)
                      ++++|+|||++..
T Consensus       178 pk~IIfIDD~~~n  190 (252)
T PF11019_consen  178 PKKIIFIDDNKEN  190 (252)
T ss_pred             CCeEEEEeCCHHH
Confidence            9999999999843

The function is not known.

>PRK10444 UMP phosphatase; Provisional

Probab=91.69  E-value=0.43  Score=44.17  Aligned_cols=54  Identities=20%  Similarity=0.272  Sum_probs=43.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      +.+++||||||++..                        ..=|+..++++++.+ ...+++-|.....-+..+.+.|.-
T Consensus         2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~   56 (248)
T PRK10444          2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT   56 (248)
T ss_pred             cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            378999999999852                        135899999999986 588899999888777777777743

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=91.60  E-value=0.49  Score=41.92  Aligned_cols=57  Identities=12%  Similarity=0.187  Sum_probs=40.7

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+....                       ...|...+-|+++.+. ..++|-|.-....+.++++.+...
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (230)
T PRK01158          4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS   60 (230)
T ss_pred             eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            5889999999996421                       1456667777777754 677777777777777777777655


Q ss_pred             C
Q 022460          222 Q  222 (297)
Q Consensus       222 ~  222 (297)
                      +
T Consensus        61 ~   61 (230)
T PRK01158         61 G   61 (230)
T ss_pred             C
Confidence            3

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=91.54  E-value=0.38  Score=43.69  Aligned_cols=54  Identities=22%  Similarity=0.266  Sum_probs=37.1

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +++||||||+....                       ...|...+.|+++.+. ..++|-|......+..+++.+...
T Consensus         2 i~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099         2 IFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             EEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            78999999997421                       1345566667777654 777777777777777777766544

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=91.50  E-value=0.29  Score=42.72  Aligned_cols=54  Identities=28%  Similarity=0.268  Sum_probs=43.0

Q ss_pred             EEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      .+++|+||||+....                      -...|.+.+.|+++.+. ..++|-|.....++..+++.++
T Consensus         1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~   55 (204)
T TIGR01484         1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP   55 (204)
T ss_pred             CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence            378999999997310                      12468889999999876 7899999999999999988753

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=91.47  E-value=0.32  Score=41.32  Aligned_cols=49  Identities=10%  Similarity=0.260  Sum_probs=40.7

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY  230 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~  230 (297)
                      +..+|++.++|+.+.+ .+.++|-|++...+++.+++.++-.. +|...+.
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~  120 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYS  120 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEec
Confidence            5789999999999976 48999999999999999999876543 5665553

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=91.46  E-value=0.19  Score=50.24  Aligned_cols=79  Identities=13%  Similarity=0.128  Sum_probs=59.6

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee--eCCceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--ADGEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~--~~g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..+||+.++|+++.+ .+.+.|.|++.+.++..+++.++-.. +|...+..+....  ....+.+-+..+  +++++|+
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~  405 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV  405 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence            5678999999999975 59999999999999999999987654 7888777654321  111233444444  3578999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |.|++
T Consensus       406 VGDs~  410 (459)
T PRK06698        406 VGDRL  410 (459)
T ss_pred             EeCCH
Confidence            99997

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=91.40  E-value=0.22  Score=55.24  Aligned_cols=81  Identities=12%  Similarity=0.127  Sum_probs=66.8

Q ss_pred             eCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEEE
Q 022460          183 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       183 ~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVII  258 (297)
                      ..||+.++|++|.+ .+.++|.|++...+++.+++.+.-...+|+..+..+.+...+   ..|.+-++++|.+.+++|+|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence            57999999999975 599999999999999999999865434788888877665332   24667778889999999999


Q ss_pred             ECCCc
Q 022460          259 DNTPQ  263 (297)
Q Consensus       259 DDsp~  263 (297)
                      +|++.
T Consensus       242 gDs~~  246 (1057)
T PLN02919        242 EDALA  246 (1057)
T ss_pred             cCCHH
Confidence            99973

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=91.10  E-value=0.32  Score=43.06  Aligned_cols=53  Identities=21%  Similarity=0.224  Sum_probs=41.5

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      ++.||||||+....                     .  .-|-..+.|+.+.+. ..+++-|......+.++++.+.-
T Consensus         2 i~~DlDGTLL~~~~---------------------~--~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~   55 (221)
T TIGR02463         2 VFSDLDGTLLDSHS---------------------Y--DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL   55 (221)
T ss_pred             EEEeCCCCCcCCCC---------------------C--CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence            78999999997421                     0  122367888888865 79999999999999999998853

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=90.86  E-value=0.51  Score=43.28  Aligned_cols=14  Identities=29%  Similarity=0.382  Sum_probs=12.4

Q ss_pred             cEEEEeCCcceeee
Q 022460          143 ITLVLDLDETLVHS  156 (297)
Q Consensus       143 ~tLVLDLDeTLVhs  156 (297)
                      +.+++||||||+..
T Consensus         3 kli~~DlDGTLl~~   16 (272)
T PRK15126          3 RLAAFDMDGTLLMP   16 (272)
T ss_pred             cEEEEeCCCcCcCC
Confidence            58899999999974

>PRK10976 putative hydrolase; Provisional

Probab=90.74  E-value=0.56  Score=42.72  Aligned_cols=14  Identities=36%  Similarity=0.453  Sum_probs=12.5

Q ss_pred             cEEEEeCCcceeee
Q 022460          143 ITLVLDLDETLVHS  156 (297)
Q Consensus       143 ~tLVLDLDeTLVhs  156 (297)
                      +.+++||||||+..
T Consensus         3 kli~~DlDGTLl~~   16 (266)
T PRK10976          3 QVVASDLDGTLLSP   16 (266)
T ss_pred             eEEEEeCCCCCcCC
Confidence            58899999999975

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=90.64  E-value=0.45  Score=45.53  Aligned_cols=52  Identities=15%  Similarity=0.192  Sum_probs=38.3

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-----CcEEEEEcCCc----cccHHH
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-----MFDVVIFTAGQ----SIYAGQ  213 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-----~fEIvIfTas~----~~YA~~  213 (297)
                      +.+++|+||||++...                        .-|+..++++.+..     ...+++.|...    +.+++.
T Consensus         1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~   56 (321)
T TIGR01456         1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE   56 (321)
T ss_pred             CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence            3689999999999621                        36889999999986     67888888765    345555


Q ss_pred             HHHhh
Q 022460          214 LLDIL  218 (297)
Q Consensus       214 Il~~L  218 (297)
                      +.+.+
T Consensus        57 l~~~l   61 (321)
T TIGR01456        57 ISSLL   61 (321)
T ss_pred             HHHHc
Confidence            54443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=90.57  E-value=0.51  Score=43.65  Aligned_cols=56  Identities=18%  Similarity=0.109  Sum_probs=38.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      +.+++|+||||++....                .    =..=|+..++++++.+. ..+++.|..+..-...+.+.|
T Consensus         2 k~i~~D~DGtl~~~~~~----------------~----~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l   58 (257)
T TIGR01458         2 KGVLLDISGVLYISDAK----------------S----GVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL   58 (257)
T ss_pred             CEEEEeCCCeEEeCCCc----------------c----cCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence            47899999999985210                0    00358999999999865 888888876655433444433

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=90.22  E-value=0.51  Score=43.06  Aligned_cols=53  Identities=21%  Similarity=0.142  Sum_probs=40.9

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      +++||||||++...                       ...|...+.++.+.+. ..+++-|.-....+..+++.+..
T Consensus         2 i~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~   55 (256)
T TIGR01486         2 IFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL   55 (256)
T ss_pred             EEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence            78999999998521                       0223478899998875 78888888888888888888864

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PLN02645 phosphoglycolate phosphatase

Probab=89.90  E-value=0.69  Score=44.00  Aligned_cols=55  Identities=15%  Similarity=0.068  Sum_probs=41.9

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +-..+++|+||||++..                      .+  =||..++|+++.+ ...+++-|+....-...+++.|.
T Consensus        27 ~~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~   82 (311)
T PLN02645         27 SVETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE   82 (311)
T ss_pred             hCCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence            34589999999999842                      11  2899999999975 58999999988666666666553

>smart00775 LNS2 LNS2 domain

Probab=89.89  E-value=0.54  Score=40.57  Aligned_cols=62  Identities=18%  Similarity=0.250  Sum_probs=39.6

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHH---HHHHhh
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAG---QLLDIL  218 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~---~Il~~L  218 (297)
                      +++|+||||+.+.....     ..+. + +.  .   ...|++.++++++.+. +.+++-|+....-+.   +.++.+
T Consensus         2 VisDIDGTL~~sd~~~~-----~~~~-~-~~--~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~   67 (157)
T smart00775        2 VISDIDGTITKSDVLGH-----VVPI-I-GK--D---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI   67 (157)
T ss_pred             EEEecCCCCcccccccc-----cccc-c-cc--C---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence            78999999997642110     0000 0 10  1   2479999999999875 777777777665554   555553

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=89.52  E-value=0.64  Score=43.31  Aligned_cols=60  Identities=15%  Similarity=0.056  Sum_probs=41.3

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHHhh
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      ++..+++|+||||+.....+..                  ...-|.+.+-|+.+++  ...++|-|.-...-+..++..+
T Consensus        13 ~~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~   74 (266)
T PRK10187         13 ANYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY   74 (266)
T ss_pred             CCEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence            4689999999999975332210                  1234778888888875  4677787777777666666544

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=89.45  E-value=0.8  Score=42.64  Aligned_cols=52  Identities=15%  Similarity=0.107  Sum_probs=36.2

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      ..+++|+||||++..                        ..-|++.++|+++.+ ...+++-|+.+..-...++..|
T Consensus         3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l   55 (279)
T TIGR01452         3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF   55 (279)
T ss_pred             cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            478999999998741                        135789999999986 4788888886544333333333

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=89.41  E-value=0.77  Score=40.33  Aligned_cols=103  Identities=14%  Similarity=0.059  Sum_probs=63.9

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      -+.+|+|.||+|-.-+..          +.-.|.. ...+..|=+.--.+ --.+.+.+.|-|+....+++.+++.+.-.
T Consensus         7 i~~~v~d~dGv~tdg~~~----------~~~~g~~-~~~~~~~D~~~~~~-L~~~Gi~laIiT~k~~~~~~~~l~~lgi~   74 (169)
T TIGR02726         7 IKLVILDVDGVMTDGRIV----------INDEGIE-SRNFDIKDGMGVIV-LQLCGIDVAIITSKKSGAVRHRAEELKIK   74 (169)
T ss_pred             CeEEEEeCceeeECCeEE----------EcCCCcE-EEEEecchHHHHHH-HHHCCCEEEEEECCCcHHHHHHHHHCCCc
Confidence            568999999999864321          1111222 22234455443221 11356999999999999999999999665


Q ss_pred             CceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                       .+|...      ......+.+-+..+|-+.++++.|-|++.
T Consensus        75 -~~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~n  109 (169)
T TIGR02726        75 -RFHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLV  109 (169)
T ss_pred             -EEEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHH
Confidence             355421      10111233444556888899999999873

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=89.10  E-value=0.84  Score=40.19  Aligned_cols=52  Identities=19%  Similarity=0.247  Sum_probs=30.2

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +++||||||+.....                       ..|-..+-|+++.+. ..+++-|.-....+.++++.|.
T Consensus         1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~   53 (225)
T TIGR01482         1 IASDIDGTLTDPNRA-----------------------INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG   53 (225)
T ss_pred             CeEeccCccCCCCcc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence            589999999975311                       233444445555443 5555655555555555555554

catalyze the same reaction as SPP.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=88.52  E-value=1.1  Score=40.73  Aligned_cols=42  Identities=12%  Similarity=0.288  Sum_probs=37.7

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ  222 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~  222 (297)
                      ++.|||.++|.+++.++ -.++|-|+|+..|..++++.|--+.
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke  114 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE  114 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence            78999999999999976 7999999999999999999885443

>PTZ00174 phosphomannomutase; Provisional

Probab=87.52  E-value=0.96  Score=41.34  Aligned_cols=16  Identities=31%  Similarity=0.495  Sum_probs=13.7

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+++.
T Consensus         5 ~klia~DlDGTLL~~~   20 (247)
T PTZ00174          5 KTILLFDVDGTLTKPR   20 (247)
T ss_pred             CeEEEEECcCCCcCCC
Confidence            5689999999999863

>PLN02423 phosphomannomutase

Probab=87.32  E-value=1.3  Score=40.75  Aligned_cols=55  Identities=15%  Similarity=0.227  Sum_probs=35.1

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhc
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +.+..+++||||||+....                       ..-|...+-++++.+...+++.|..  .| ..+.+.+.
T Consensus         5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR--~~-~~~~~~~~   58 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGS--DL-SKISEQLG   58 (245)
T ss_pred             ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCc--CH-HHHHHHhc
Confidence            3455666999999997521                       1346667788888877666666654  33 35555554


Q ss_pred             C
Q 022460          220 P  220 (297)
Q Consensus       220 P  220 (297)
                      +
T Consensus        59 ~   59 (245)
T PLN02423         59 K   59 (245)
T ss_pred             c
Confidence            4

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=86.96  E-value=0.78  Score=41.18  Aligned_cols=50  Identities=16%  Similarity=0.189  Sum_probs=42.8

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEec
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR  231 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~R  231 (297)
                      +..+||+.+|++.+.+.+.++|-|++...++.++++.+.-+. +|..++--
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~  116 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEI  116 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEE
Confidence            467999999999999888999999999999999999987653 66655543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=86.25  E-value=0.99  Score=39.12  Aligned_cols=49  Identities=20%  Similarity=0.217  Sum_probs=41.4

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY  230 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~  230 (297)
                      ...+|++.++|+.+.+ .+.++|-|++...+++.+++.+.-+. +|..++.
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~  135 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLE  135 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceE
Confidence            3579999999999976 58999999999999999999987664 6766554

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=86.24  E-value=1.8  Score=39.74  Aligned_cols=41  Identities=17%  Similarity=0.263  Sum_probs=29.8

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ  207 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~  207 (297)
                      ..+++|+||||++...                        .=|+..++|+++.+. ..+++-|...
T Consensus         2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~   43 (249)
T TIGR01457         2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNS   43 (249)
T ss_pred             CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence            3789999999997421                        136788888888754 7777777633

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=85.89  E-value=0.71  Score=43.53  Aligned_cols=75  Identities=20%  Similarity=0.188  Sum_probs=42.8

Q ss_pred             CCCCcEEEEeCCcceeeeecc---------CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcC-Ccc
Q 022460          139 AGLPITLVLDLDETLVHSSFD---------NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTA-GQS  208 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~---------~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTa-s~~  208 (297)
                      ..+++.+|||||||.+..+.-         +..+.+|..=+  +    .---+.=||+.+||+++-++--.|.|-+ -.+
T Consensus        76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV--~----a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~  149 (274)
T COG2503          76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWV--Q----AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQ  149 (274)
T ss_pred             cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHH--h----hcccccCccHHHHHHHHHhcCcEEEEEeccch
Confidence            346669999999999975421         11122221111  1    1123456999999999998865555544 333


Q ss_pred             cc-HHHHHHhhc
Q 022460          209 IY-AGQLLDILD  219 (297)
Q Consensus       209 ~Y-A~~Il~~LD  219 (297)
                      .- .+.-++-|-
T Consensus       150 ~~~~~~T~~nLk  161 (274)
T COG2503         150 ENEKDGTIENLK  161 (274)
T ss_pred             hcccchhHHHHH
Confidence            43 344444443

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=85.35  E-value=1.3  Score=37.22  Aligned_cols=49  Identities=18%  Similarity=0.301  Sum_probs=40.6

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY  230 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~  230 (297)
                      +..||++.++|+.+.+ .+.++|.|++...|++++++.+.-. .++..++.
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~-~~~~~~~~  121 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID-DVFANRLE  121 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc-hheeeeEE
Confidence            5579999999999976 4899999999999999999998654 35655544

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=84.41  E-value=2.2  Score=40.49  Aligned_cols=55  Identities=16%  Similarity=0.121  Sum_probs=42.1

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +..+..+||||||++-.                        ..=||+.+||+++.+. -.+++-|.+...-.+.+.+.|.
T Consensus         7 ~y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~   62 (269)
T COG0647           7 KYDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS   62 (269)
T ss_pred             hcCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence            34578999999999842                        1359999999999976 7888899987766555555443

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=84.24  E-value=0.86  Score=46.74  Aligned_cols=116  Identities=16%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCc-eeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHH
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKME-VQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD  216 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~-~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~  216 (297)
                      ...++.||||||+||+--..-...-.    .+...+. ....|    =-+++|.+.+.+ -+=+.|-|.....-|..+..
T Consensus       219 g~~kK~LVLDLDNTLWGGVIGedGv~----GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~  290 (574)
T COG3882         219 GKSKKALVLDLDNTLWGGVIGEDGVD----GIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR  290 (574)
T ss_pred             CcccceEEEecCCccccccccccccc----ceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence            45678999999999997653210000    0000000 00000    024555555554 35666777666666665553


Q ss_pred             hhcCCCceeeeEEe-ccCeeee-C-CceeeeccccCCCCCcEEEEECCCcc
Q 022460          217 ILDPNQTLIGQRVY-RDSCVFA-D-GEYLKDLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       217 ~LDP~~~~f~~rL~-Rd~C~~~-~-g~~iKDLs~Lgrdl~~vVIIDDsp~~  264 (297)
                      + -|+ .+++.--+ .-.|.+. . .+..|--.+||-.+.-+|+|||+|.-
T Consensus       291 k-hp~-MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~E  339 (574)
T COG3882         291 K-HPD-MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAE  339 (574)
T ss_pred             h-CCC-eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHH
Confidence            2 122 11111111 0111111 1 13345556778889999999999843

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=84.22  E-value=2.3  Score=41.02  Aligned_cols=56  Identities=16%  Similarity=0.149  Sum_probs=39.3

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+....                     |  .-+-..+-|+++.+. ..||+-|+-+..-+..+.+.|.-+
T Consensus         2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~   58 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE   58 (302)
T ss_pred             cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            5789999999997421                     1  123466778888765 777887777666677777777654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=84.10  E-value=3.3  Score=44.23  Aligned_cols=60  Identities=15%  Similarity=0.062  Sum_probs=43.5

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI  217 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~  217 (297)
                      ..+++.++.||||||++...                     ++.  +-..+-|+.+.+. ..+++-|.-....+..+++.
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~  469 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE  469 (694)
T ss_pred             CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence            47788999999999998521                     111  2345567777654 78888888888888888888


Q ss_pred             hcCC
Q 022460          218 LDPN  221 (297)
Q Consensus       218 LDP~  221 (297)
                      |+..
T Consensus       470 Lgl~  473 (694)
T PRK14502        470 LGIK  473 (694)
T ss_pred             cCCC
Confidence            8643

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=83.73  E-value=1.9  Score=39.30  Aligned_cols=48  Identities=23%  Similarity=0.223  Sum_probs=34.3

Q ss_pred             EEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc----cccHHHHHH
Q 022460          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ----SIYAGQLLD  216 (297)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~----~~YA~~Il~  216 (297)
                      ++||+||||+....                        .=|++.++++.+.+. +.+++-|.+.    ..+++.+.+
T Consensus         1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~   53 (236)
T TIGR01460         1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS   53 (236)
T ss_pred             CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            47999999998521                        136888999888764 8888888555    345555555

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=83.41  E-value=1.7  Score=39.49  Aligned_cols=58  Identities=24%  Similarity=0.255  Sum_probs=34.1

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCC-ccccHHHHHHhhc
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG-QSIYAGQLLDILD  219 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas-~~~YA~~Il~~LD  219 (297)
                      ++.++.||||||+.....     +               -...|.+.+-++.+.+.--.+|+.+| +..=+.++++.+.
T Consensus         1 ~~li~tDlDGTLl~~~~~-----~---------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~   59 (249)
T TIGR01485         1 RLLLVSDLDNTLVDHTDG-----D---------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP   59 (249)
T ss_pred             CeEEEEcCCCcCcCCCCC-----C---------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence            468899999999952100     0               11357777777777766634444444 4444555555443

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=83.09  E-value=1.2  Score=40.36  Aligned_cols=76  Identities=13%  Similarity=0.096  Sum_probs=52.6

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..-||+.++|++|.+.|.++|-|++...     ++...- ..+|+..+..+.-...+   ..|.+-++.+|.+.+++|+
T Consensus       112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl-~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~  185 (238)
T PRK10748        112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGL-GDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH  185 (238)
T ss_pred             CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCc-HHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence            44559999999999988999999998764     233322 24676666544322211   2355666778999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |-|++
T Consensus       186 VGD~~  190 (238)
T PRK10748        186 VGDDL  190 (238)
T ss_pred             EcCCc
Confidence            98884

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=82.17  E-value=2.2  Score=38.19  Aligned_cols=81  Identities=22%  Similarity=0.137  Sum_probs=63.4

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      ...-||+.+.|+.+++ -|.+.|.|+.....++.+++.++-.. +|...+.-+.+...+.   .+..-+..+|.+.+++|
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            4678999999999996 48999999999999999999988764 7887777343333332   23455567788867999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      +|=|+.
T Consensus       167 ~VGDs~  172 (220)
T COG0546         167 MVGDSL  172 (220)
T ss_pred             EECCCH
Confidence            999986

>PLN03017 trehalose-phosphatase

Probab=81.20  E-value=1.9  Score=42.62  Aligned_cols=59  Identities=22%  Similarity=0.166  Sum_probs=43.0

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHH
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD  216 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~  216 (297)
                      .++..|+||+||||+--...+    +              ....-|.+.+-|++|++.+.++|-|--...-+.++++
T Consensus       109 ~k~~llflD~DGTL~Piv~~p----~--------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~  167 (366)
T PLN03017        109 GKQIVMFLDYDGTLSPIVDDP----D--------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK  167 (366)
T ss_pred             CCCeEEEEecCCcCcCCcCCc----c--------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence            567899999999999321111    0              1134588889999999889999998887777776643

>PLN02887 hydrolase family protein

Probab=80.29  E-value=3.2  Score=43.44  Aligned_cols=58  Identities=22%  Similarity=0.123  Sum_probs=41.5

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .+.+.+++||||||+....                       .+-|...+-|+++.+. ..++|-|.-...-+..+++.+
T Consensus       306 ~~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L  362 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV  362 (580)
T ss_pred             cCccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence            4567999999999997521                       1345556667777654 778888877777777788877


Q ss_pred             cC
Q 022460          219 DP  220 (297)
Q Consensus       219 DP  220 (297)
                      +.
T Consensus       363 ~l  364 (580)
T PLN02887        363 DL  364 (580)
T ss_pred             Cc
Confidence            64

>TIGR01675 plant-AP plant acid phosphatase

Probab=80.06  E-value=1.5  Score=40.68  Aligned_cols=89  Identities=11%  Similarity=0.021  Sum_probs=52.8

Q ss_pred             CCCcEEEEeCCcceeeeecc--CC--CCCCc---eeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccH
Q 022460          140 GLPITLVLDLDETLVHSSFD--NC--KDADF---SFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYA  211 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~--~~--~~~d~---~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA  211 (297)
                      .++..+|||+|||++....-  ..  ....|   .+.-....    ---..-|++.+|++.+.+ -++|++-|.-.+...
T Consensus        75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~----~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r  150 (229)
T TIGR01675        75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGK----GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELR  150 (229)
T ss_pred             CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHc----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence            57889999999999975420  00  00001   00000000    012467999999999975 589999999887775


Q ss_pred             HHHHHhhcCCCce-eeeEEecc
Q 022460          212 GQLLDILDPNQTL-IGQRVYRD  232 (297)
Q Consensus       212 ~~Il~~LDP~~~~-f~~rL~Rd  232 (297)
                      ....+.|--.|-. +.+-+.|.
T Consensus       151 ~~T~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       151 NATLDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             HHHHHHHHHcCCCCcCeeeecC
Confidence            5566666444411 23444454

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PLN02954 phosphoserine phosphatase

Probab=80.02  E-value=3.9  Score=36.07  Aligned_cols=49  Identities=14%  Similarity=0.230  Sum_probs=39.8

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCC-ceeeeEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRV  229 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~-~~f~~rL  229 (297)
                      ...+||+.++|+.+.+ .+.++|-|++.+.+++.+++.+.-.. .+|..++
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~  133 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQI  133 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEE
Confidence            4578999999999976 48999999999999999999975432 3565443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	297
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		3e-25
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		5e-25
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		8e-25
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		8e-25
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		1e-24
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		2e-24
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		2e-24
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-24
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		1e-23
3qle_A	204	Structural Basis For The Function Of Tim50 In The M		7e-12
3ef0_A	372	The Structure Of Fcp1, An Essential Rna Polymerase		2e-05
3ef1_A	442	The Structure Of Fcp1, An Essential Rna Polymerase		1e-04

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 15  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 74
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 75  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 133
Query: 263 QVYLF 267
             Y+F
Sbjct: 134 ASYVF 138

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
           +V+DLDETLVHSSF    +ADF  P+     +  V+V +RP++  FL+ +  +F+ V+FT
Sbjct: 31  VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 90
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
           A  + YA  + D+LD    +   R++R+SCVF  G Y+KDL+ LGR+L+++ IVDN+P  
Sbjct: 91  ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 149
Query: 265 YLF 267
           Y+F
Sbjct: 150 YIF 152

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+    +F+ V+
Sbjct: 16  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRXGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I DN+P
Sbjct: 76  FTASLAKYADPVADXLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLIXDNSP 134
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
             Y+F       PD  +   S++ N S
Sbjct: 135 ASYVF------HPDNAVPVASWFDNXS 155

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  PI  +     V+V +RPY+  FL  +  +F+ V+
Sbjct: 18  ICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 77
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD    +   R++R+SCVF  G Y+KDL+ LGRDL +  I+DN+P
Sbjct: 78  FTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSP 136
Query: 263 QVYLF 267
             Y+F
Sbjct: 137 ASYIF 141

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V++LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 16  ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 76  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 134
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
             Y+F       PD  +   S++ N S
Sbjct: 135 ASYVF------HPDNAVPVASWFDNMS 155

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+ LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 16  ICVVIXLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 76  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 134
Query: 263 QVYLF 267
             Y+F
Sbjct: 135 ASYVF 139

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DL ETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIDLAETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 137
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
             Y+F       PD  +   S++ N S
Sbjct: 138 ASYVF------HPDNAVPVASWFDNMS 158

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+ N+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILANSP 137
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
             Y+F       PD  +   S++ N S
Sbjct: 138 ASYVF------HPDNAVPVASWFDNMS 158

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+ LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIXLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+ N+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILANSP 137
Query: 263 QVYLFLSYINYPPDILIIYLSFYINAS 289
             Y+F       PD  +   S++ N S
Sbjct: 138 ASYVF------HPDNAVPVASWFDNMS 158

>pdb|3QLE|A Chain A, Structural Basis For The Function Of Tim50 In The Mitochondrial Presequence Translocase Length = 204

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLV+ L++ LVHS +              K   +T    +RP    FL  ++  +++V+F
Sbjct: 36  TLVITLEDFLVHSEWSQ------------KHGWRTA---KRPGADYFLGYLSQYYEIVLF 80
Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           ++   +Y+ ++ + LDP    +   ++++ CV+ DG ++KDL+ L RDL+++ I+D  P 
Sbjct: 81  SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN 140
Query: 264 VY 265
            Y
Sbjct: 141 SY 142

>pdb|3EF0|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEV-----------------QTVFVRQRP 185
           ++L++DLD+T++H++ D       S P +   +V                    +++ RP
Sbjct: 19  LSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 78
Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV
Sbjct: 79  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRV 122

>pdb|3EF1|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase Length = 442

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEV-----------------QTVFVRQRP 185
           ++L++ LD+T++H++ D       S P +   +V                    +++ RP
Sbjct: 27  LSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 86
Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV
Sbjct: 87  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRV 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	297
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	5e-52
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	3e-50
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	9e-46
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	7e-37
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	1e-31
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	3e-21

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score =  168 bits (427), Expect = 5e-52
 Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 119 QNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQT 178
           Q +P  +P      P    +      +V+DLDETLVHSSF    +ADF  P+     +  
Sbjct: 5   QVIPIPSPPAKYLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQ 64

Query: 179 VFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD 238
           V+V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD    +   R++R+SCVF  
Sbjct: 65  VYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHR 123

Query: 239 GEYLKDLTILGRDLARIAIVDNTPQVYLF 267
           G Y+KDL+ LGR+L+++ IVDN+P  Y+F
Sbjct: 124 GNYVKDLSRLGRELSKVIIVDNSPASYIF 152

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score =  163 bits (414), Expect = 3e-50
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 12/147 (8%)

Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
           LP+       +           I +V++LDETLVHSSF    +ADF  P+     V  V+
Sbjct: 5   LPEAKAQDSDK-----------ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVY 53

Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
           V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD        R++R+SCVF  G 
Sbjct: 54  VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGN 112

Query: 241 YLKDLTILGRDLARIAIVDNTPQVYLF 267
           Y+KDL+ LGRDL R+ I+DN+P  Y+F
Sbjct: 113 YVKDLSRLGRDLRRVLILDNSPASYVF 139

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score =  152 bits (386), Expect = 9e-46
 Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 15/135 (11%)

Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
           P   P    P+TLV+ L++ LVHS +                +       +RP    FL 
Sbjct: 25  PPPPPPYQRPLTLVITLEDFLVHSEWS---------------QKHGWRTAKRPGADYFLG 69

Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
            ++  +++V+F++   +Y+ ++ + LDP    +   ++++ CV+ DG ++KDL+ L RDL
Sbjct: 70  YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDL 129

Query: 253 ARIAIVDNTPQVYLF 267
           +++ I+D  P  Y  
Sbjct: 130 SKVIIIDTDPNSYKL 144

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score =  134 bits (337), Expect = 7e-37
 Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 20/143 (13%)

Query: 143 ITLVLDLDETLVHSSFDNCKDA-----------------DFSFPIHSKMEVQTVFVRQRP 185
           ++L++DLD+T++H++ D                       F+            +++ RP
Sbjct: 19  LSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 78

Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKD 244
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV  RD       + L+ 
Sbjct: 79  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRR 138

Query: 245 LTILGRDLARIAIVDNTPQVYLF 267
             +   D + + ++D+   V+ +
Sbjct: 139 --LFPCDTSMVVVIDDRGDVWDW 159

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score =  121 bits (303), Expect = 1e-31
 Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 20/143 (13%)

Query: 143 ITLVLDLDETLVHSSFDNCKDA-----------------DFSFPIHSKMEVQTVFVRQRP 185
           ++L++ LD+T++H++ D                       F+            +++ RP
Sbjct: 27  LSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 86

Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKD 244
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV  RD       + L+ 
Sbjct: 87  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRR 146

Query: 245 LTILGRDLARIAIVDNTPQVYLF 267
             +   D + + ++D+   V+ +
Sbjct: 147 --LFPCDTSMVVVIDDRGDVWDW 167

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score = 90.7 bits (224), Expect = 3e-21
 Identities = 34/230 (14%), Positives = 69/230 (30%), Gaps = 33/230 (14%)

Query: 55  GKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLY 114
                  T  D + I      P+ +L      +  + D  S   +   + D+        
Sbjct: 49  NLKYKGKTAADNVKISALELKPNFKLMMVGSTEADIEDACSLPDNIGEVVDDFDDADERE 108

Query: 115 FMGWQNLPQIAPSYWP----RTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPI 170
                +   +A         +     P       LVLD+D TL                 
Sbjct: 109 ESVAHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTL----------------F 152

Query: 171 HSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230
             +   +T     RPYLH FL +    +D+VI++A    +  + + +L        + ++
Sbjct: 153 DHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMF 212

Query: 231 RDS--------CVFADGEYLKDLTIL-----GRDLARIAIVDNTPQVYLF 267
                              +K L ++       + +   + D+  + +L 
Sbjct: 213 YLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLM 262

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	297
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	100.0
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	100.0
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	100.0
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	100.0
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.97
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.26
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.2
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.2
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.17
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.11
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	97.94
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	97.84
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.83
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	97.79
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	97.74
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	97.51
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	97.48
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.34
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.31
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	97.31
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	97.26
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.26
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.24
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.19
2o2x_A	218	Hypothetical protein; structural genomics, joint c	97.11
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.09
3mmz_A	176	Putative HAD family hydrolase; structural genomics	96.98
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	96.89
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	96.83
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	96.76
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	96.71
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	96.66
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.58
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	96.42
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	96.35
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.34
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	96.12
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	96.08
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	96.06
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	96.05
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	96.0
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.0
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	95.99
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	95.95
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	95.94
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	95.94
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	95.92
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	95.9
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	95.87
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	95.87
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	95.85
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	95.78
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	95.73
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	95.72
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	95.71
2hsz_A	243	Novel predicted phosphatase; structural genomics,	95.69
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	95.63
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	95.57
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	95.43
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	95.33
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	95.31
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	95.31
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	95.3
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	94.92
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	94.8
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	94.72
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	94.64
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	94.53
1te2_A	226	Putative phosphatase; structural genomics, phospha	94.51
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	94.49
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	94.48
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	94.47
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	94.44
2zg6_A	220	Putative uncharacterized protein ST2620, probable	94.37
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	94.36
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	94.34
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	94.34
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	94.32
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	94.25
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	94.2
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	94.12
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	94.11
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	94.05
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	93.93
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	93.93
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	93.93
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	93.9
3fvv_A	232	Uncharacterized protein; unknown function, structu	93.82
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	93.6
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	93.44
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	93.37
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	93.29
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	93.26
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	93.21
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	93.15
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	93.13
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	93.11
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	93.09
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	92.98
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	92.96
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	92.85
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	92.85
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	92.83
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	92.82
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	92.78
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	92.64
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	92.58
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	91.92
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	91.91
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	91.88
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	91.85
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	91.8
3dao_A	283	Putative phosphatse; structural genomics, joint ce	91.8
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	91.73
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	91.72
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	91.64
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	91.44
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	91.4
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	91.26
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	91.12
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	91.06
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	91.0
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	90.93
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	90.57
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	90.47
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	90.38
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	89.94
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	89.8
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	89.78
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	89.76
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	89.51
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	89.3
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	88.91
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	88.21
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	88.19
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	88.17
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	88.07
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	87.82
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	88.0
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	87.78
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	87.46
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	87.44
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	86.82
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	86.07
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	85.12
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	85.1
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	83.25
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	83.01
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	82.64
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	82.51
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	81.77
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	80.77
2hsz_A	243	Novel predicted phosphatase; structural genomics,	80.57
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	80.18
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	80.11

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=100.00  E-value=3.3e-41  Score=301.76  Aligned_cols=149  Identities=26%  Similarity=0.511  Sum_probs=132.5

Q ss_pred             CCCCCCCCCCCC--CCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEE
Q 022460          126 PSYWPRTPLREP--IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF  203 (297)
Q Consensus       126 ~~~~p~llP~~~--~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIf  203 (297)
                      ++..+.|+|++.  ..++|+||||||||||||+++.+               ..+++|++|||+++||++|+++|||+||
T Consensus        16 ~p~~~~lLp~~~~~~~~~~~tLVLDLDeTLvh~~~~~---------------~~~~~v~~RPgl~eFL~~l~~~yeivI~   80 (204)
T 3qle_A           16 EPPFPDLLPPPPPPPYQRPLTLVITLEDFLVHSEWSQ---------------KHGWRTAKRPGADYFLGYLSQYYEIVLF   80 (204)
T ss_dssp             ---CCCCSCCCC----CCSEEEEEECBTTTEEEEEET---------------TTEEEEEECTTHHHHHHHHTTTEEEEEE
T ss_pred             CCCcccCCCCCCccccCCCeEEEEeccccEEeeeccc---------------cCceeEEeCCCHHHHHHHHHhCCEEEEE
Confidence            344556666554  35889999999999999997643               2367899999999999999999999999


Q ss_pred             cCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCC
Q 022460          204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPP  275 (297)
Q Consensus       204 Tas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~  275 (297)
                      ||+.+.||++|++.|||.+.+|++|+||++|...+|.|+|||++|||++++||||||+|.+|..|        +|.|++ 
T Consensus        81 Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~~~-  159 (204)
T 3qle_A           81 SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEA-  159 (204)
T ss_dssp             CSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCSSC-
T ss_pred             cCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeECCCC-
Confidence            99999999999999999988999999999999999999999999999999999999999999988        899875 


Q ss_pred             ChhHHHHHHHHHHHH
Q 022460          276 DILIIYLSFYINASL  290 (297)
Q Consensus       276 D~eLl~L~p~L~~La  290 (297)
                      |+||++|+|||+.|+
T Consensus       160 D~eL~~L~~~L~~L~  174 (204)
T 3qle_A          160 DDKLVRLIPFLEYLA  174 (204)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHh
Confidence            679999999999998

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=100.00  E-value=3.8e-40  Score=287.51  Aligned_cols=164  Identities=37%  Similarity=0.599  Sum_probs=151.7

Q ss_pred             CCCCCCCCCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460          130 PRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI  209 (297)
Q Consensus       130 p~llP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~  209 (297)
                      +.|+|+.+...+|+||||||||||||++..+...+++.+++.+++..+++++++|||+++||+++++.|+++|||++.+.
T Consensus         3 ~llp~~~~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~   82 (181)
T 2ght_A            3 YLLPEAKAQDSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAK   82 (181)
T ss_dssp             CSSCCCCGGGTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHH
T ss_pred             CCCCCCCcccCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHH
Confidence            34444444568899999999999999999888888999999888888889999999999999999999999999999999


Q ss_pred             cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460          210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY  281 (297)
Q Consensus       210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~  281 (297)
                      ||+++++.|||.+ +|++|++|++|...+|.|+|+|+++|++++++|+|||++..|..|        +|+++++|++|++
T Consensus        83 ~a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~  161 (181)
T 2ght_A           83 YADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHD  161 (181)
T ss_dssp             HHHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCSSCTTCCHHHH
T ss_pred             HHHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccccCCCChHHHHH
Confidence            9999999999997 899999999999999999999999999999999999999999887        9999999999999


Q ss_pred             HHHHHHHHHhhhc
Q 022460          282 LSFYINASLDILY  294 (297)
Q Consensus       282 L~p~L~~La~v~s  294 (297)
                      |+|||+.|+.+..
T Consensus       162 l~~~L~~l~~~~D  174 (181)
T 2ght_A          162 LLPFFEQLSRVDD  174 (181)
T ss_dssp             HHHHHHHHTTCSC
T ss_pred             HHHHHHHhCcCcc
Confidence            9999999997653

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.7e-39  Score=284.60  Aligned_cols=164  Identities=35%  Similarity=0.583  Sum_probs=149.8

Q ss_pred             CCCCCCCCCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccc
Q 022460          130 PRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSI  209 (297)
Q Consensus       130 p~llP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~  209 (297)
                      +.|+|+.....+|+||||||||||||+++.+...+++.+++.+++....+++++|||+++||+++++.|+++|||++.+.
T Consensus        16 ~llp~~~~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~   95 (195)
T 2hhl_A           16 YLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAK   95 (195)
T ss_dssp             SSSCCCCGGGTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHH
T ss_pred             CCCCCCCcccCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHH
Confidence            44444444468899999999999999999888888999998888888889999999999999999999999999999999


Q ss_pred             cHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHH
Q 022460          210 YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIY  281 (297)
Q Consensus       210 YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~  281 (297)
                      ||+++++.|||.+ +|++|++|++|...++.|+|+|++||++++++|+|||++..|..|        +|+++++|+||++
T Consensus        96 ~a~~vl~~ld~~~-~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~  174 (195)
T 2hhl_A           96 YADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLD  174 (195)
T ss_dssp             HHHHHHHHHCCSS-CEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCTTCCHHHH
T ss_pred             HHHHHHHHhCCcc-cEEEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCCChHHHHH
Confidence            9999999999997 899999999999999999999999999999999999999999887        9999999999999


Q ss_pred             HHHHHHHHHhhhc
Q 022460          282 LSFYINASLDILY  294 (297)
Q Consensus       282 L~p~L~~La~v~s  294 (297)
                      |+|||+.|+.+..
T Consensus       175 L~~~L~~l~~~~~  187 (195)
T 2hhl_A          175 LIPFFEGLSREDD  187 (195)
T ss_dssp             HHHHHHHHHC---
T ss_pred             HHHHHHHHHhCcC
Confidence            9999999998753

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=100.00  E-value=9.3e-36  Score=282.44  Aligned_cols=136  Identities=24%  Similarity=0.298  Sum_probs=123.1

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhh
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      ..+|+||||||||||||+....                .++++++|||+++||++|+++|||+||||+.+.||++|++.|
T Consensus       137 ~~~k~tLVLDLDeTLvh~~~~~----------------~~~~~~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~L  200 (320)
T 3shq_A          137 REGKKLLVLDIDYTLFDHRSPA----------------ETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLL  200 (320)
T ss_dssp             CTTCEEEEECCBTTTBCSSSCC----------------SSHHHHBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHT
T ss_pred             cCCCcEEEEeccccEEcccccC----------------CCcceEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHh
Confidence            4578999999999999986421                235688999999999999999999999999999999999999


Q ss_pred             cCCCce-eeeEEeccCeeee------CC-ceeeecccc-----CCCCCcEEEEECCCcccccC--------CCCCC----
Q 022460          219 DPNQTL-IGQRVYRDSCVFA------DG-EYLKDLTIL-----GRDLARIAIVDNTPQVYLFL--------SYINY----  273 (297)
Q Consensus       219 DP~~~~-f~~rL~Rd~C~~~------~g-~~iKDLs~L-----grdl~~vVIIDDsp~~~~~q--------~w~~d----  273 (297)
                      ||.+.+ +.+|+||++|...      .| .|+|||++|     ||++++||||||+|.+|.+|        +|+++    
T Consensus       201 d~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~~~~~~~~  280 (320)
T 3shq_A          201 GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNR  280 (320)
T ss_dssp             TCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCCCCHHHHT
T ss_pred             CCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCeEcCCCCCC
Confidence            999865 7899999999743      25 599999999     99999999999999999998        89986    


Q ss_pred             CCChhHHHHHHHHHHHH
Q 022460          274 PPDILIIYLSFYINASL  290 (297)
Q Consensus       274 ~~D~eLl~L~p~L~~La  290 (297)
                      ++|++|++|+|||+.|+
T Consensus       281 ~~D~eL~~L~~~L~~L~  297 (320)
T 3shq_A          281 GTDTELLKLSDYLRKIA  297 (320)
T ss_dssp             TTCCHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHh
Confidence            78999999999999999

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.8e-33  Score=272.44  Aligned_cols=142  Identities=23%  Similarity=0.418  Sum_probs=119.5

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCC----------CC-------CceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEE
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCK----------DA-------DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV  201 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~----------~~-------d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIv  201 (297)
                      ..+|++||||||+|||||+..+..          +.       +|.+++.+++..+.+||++|||+++||++|+++|||+
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~~yEiv  102 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELH  102 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTTTEEEE
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhCCcEEE
Confidence            368999999999999999986531          11       3666666677788999999999999999999999999


Q ss_pred             EEcCCccccHHHHHHhhcCCCceeeeEEe-ccCeeeeCCceeeecccc-CCCCCcEEEEECCCcccccC-------CC--
Q 022460          202 IFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVYLFL-------SY--  270 (297)
Q Consensus       202 IfTas~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~~~q-------~w--  270 (297)
                      ||||+.+.||++|++.|||+|.+|++|+| |++|.   +.|+|||++| |||+++||||||+|.+|.+|       +|  
T Consensus       103 IfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg---~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~pN~I~I~~~~f  179 (442)
T 3ef1_A          103 IYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNPNLIKVVPYEF  179 (442)
T ss_dssp             EECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCTTEEECCCCCC
T ss_pred             EEcCCCHHHHHHHHHHhccCCccccceEEEecCCC---CceeeehHHhcCCCcceEEEEECCHHHhCCCCCEEEcCCccc
Confidence            99999999999999999999999999998 99993   4589999976 99999999999999999998       77  


Q ss_pred             ---CCCCCChhHHHHH
Q 022460          271 ---INYPPDILIIYLS  283 (297)
Q Consensus       271 ---~~d~~D~eLl~L~  283 (297)
                         .||.+|..|.+.-
T Consensus       180 F~~~gD~n~~~l~~~~  195 (442)
T 3ef1_A          180 FVGIGDINSNFLAKST  195 (442)
T ss_dssp             STTCCCSCC-------
T ss_pred             cCCCCccccccccccc
Confidence               3777887766544

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.5e-30  Score=251.24  Aligned_cols=126  Identities=25%  Similarity=0.479  Sum_probs=111.5

Q ss_pred             CCCcEEEEeCCcceeeeeccCC---------C-C-------CCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEE
Q 022460          140 GLPITLVLDLDETLVHSSFDNC---------K-D-------ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI  202 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~---------~-~-------~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvI  202 (297)
                      .+|++||||||||||||+.++.         . +       .+|.+++...+..+.+||++|||+++||++++++|||+|
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yeivI   95 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI   95 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEEEE
Confidence            6889999999999999986542         1 1       135566555667789999999999999999999999999


Q ss_pred             EcCCccccHHHHHHhhcCCCceeeeEEe-ccCeeeeCCceeeecccc-CCCCCcEEEEECCCcccccC
Q 022460          203 FTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVYLFL  268 (297)
Q Consensus       203 fTas~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~~g~~iKDLs~L-grdl~~vVIIDDsp~~~~~q  268 (297)
                      |||+.+.||++|++.|||.+++|++|++ |++|.   +.|+|||++| ||++++||||||+|.+|.+|
T Consensus        96 ~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g---~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~  160 (372)
T 3ef0_A           96 YTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWN  160 (372)
T ss_dssp             ECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTC
T ss_pred             EeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC---CcceecHHHhcCCCCceEEEEeCCHHHcCCC
Confidence            9999999999999999999999999988 99983   4589999987 99999999999999999998

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.26  E-value=1.5e-07  Score=73.96  Aligned_cols=97  Identities=11%  Similarity=0.133  Sum_probs=74.2

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++|+||||...                        ....|++.++|+++.+. +.++|.|.+...++..+++.+.-.
T Consensus         3 k~i~~D~DgtL~~~------------------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~   58 (137)
T 2pr7_A            3 RGLIVDYAGVLDGT------------------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN   58 (137)
T ss_dssp             CEEEECSTTTTSSC------------------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred             cEEEEeccceecCC------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence            57999999999331                        22579999999999875 999999999999999999988654


Q ss_pred             CceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEEEECCCcc
Q 022460          222 QTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       222 ~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp~~  264 (297)
                      . +|+..+..+.+...+   ..|.+=++.+|.+.+++++|+|++.-
T Consensus        59 ~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~d  103 (137)
T 2pr7_A           59 G-VVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILN  103 (137)
T ss_dssp             T-SSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHH
T ss_pred             h-hccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHH
Confidence            3 677777655433222   13445566778889999999999853

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.20  E-value=8.7e-07  Score=75.23  Aligned_cols=110  Identities=17%  Similarity=0.083  Sum_probs=77.8

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc---ccHHHHHHh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS---IYAGQLLDI  217 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~---~YA~~Il~~  217 (297)
                      -+++++|+||||+......... .+.      ...  -.+..+||+.++|+++.+. +.++|.|.+..   .++..+++.
T Consensus         3 ik~vifD~DgtL~~~~~~~y~~-~~~------~~~--~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~   73 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYDH-HPL------DTY--PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN   73 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSCS-SCG------GGC--TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             ceEEEEcCCCceeeccchhhhh-HHH------hcc--CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh
Confidence            3589999999998732211000 000      000  0155899999999999876 99999998877   888899998


Q ss_pred             hcCCCceeeeEEeccCe----eeeC---CceeeeccccCCCCCcEEEEECC
Q 022460          218 LDPNQTLIGQRVYRDSC----VFAD---GEYLKDLTILGRDLARIAIVDNT  261 (297)
Q Consensus       218 LDP~~~~f~~rL~Rd~C----~~~~---g~~iKDLs~Lgrdl~~vVIIDDs  261 (297)
                      +.-.. +|+..+..+..    ...+   ..|.+=+..+|.+.+++|+|+|+
T Consensus        74 ~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~  123 (189)
T 3ib6_A           74 FGIID-YFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNT  123 (189)
T ss_dssp             TTCGG-GEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESB
T ss_pred             cCchh-heEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCC
Confidence            87764 78888877653    1111   23455566779999999999999

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.20  E-value=9.3e-07  Score=74.79  Aligned_cols=117  Identities=20%  Similarity=0.131  Sum_probs=77.1

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCc---eeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc-cccHHHHHH
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKME---VQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ-SIYAGQLLD  216 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~---~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~-~~YA~~Il~  216 (297)
                      .+.+++||||||+...........+....  .+.   ...-.+...|++.++|+.+.+. +.++|.|++. ..++..+++
T Consensus        27 ~k~vifDlDGTL~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~  104 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWVDTHVDPPFHKSS--DGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLE  104 (187)
T ss_dssp             CSEEEECSBTTTBSSCTTTSSCSCCEECT--TSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred             cCEEEEcCCCCcchHHHhhccCcchhhhc--ccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence            35899999999985332211111111000  000   0012356899999999999875 9999999998 699999999


Q ss_pred             hhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          217 ILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       217 ~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .+.-.. +|+..+....  .....+.+-++.+|.+.+++++|+|++.
T Consensus       105 ~~gl~~-~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~~~igD~~~  148 (187)
T 2wm8_A          105 LFDLFR-YFVHREIYPG--SKITHFERLQQKTGIPFSQMIFFDDERR  148 (187)
T ss_dssp             HTTCTT-TEEEEEESSS--CHHHHHHHHHHHHCCCGGGEEEEESCHH
T ss_pred             HcCcHh-hcceeEEEeC--chHHHHHHHHHHcCCChHHEEEEeCCcc
Confidence            987764 6776533221  1112344555677999999999999964

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.17  E-value=2.9e-06  Score=71.78  Aligned_cols=109  Identities=16%  Similarity=0.124  Sum_probs=73.3

Q ss_pred             CCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCC-----------
Q 022460          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAG-----------  206 (297)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas-----------  206 (297)
                      ....+++++|+||||+.....     .|.  ..  .   .-.+...|++.++|+++.+. |.++|.|++           
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~-----~~~--~~--~---~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~   78 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS-----DFQ--VD--R---FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQA   78 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC-------CCC--CC--S---GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHH
T ss_pred             CCcCcEEEEeCCCCeEcCCCC-----CcC--cC--C---HHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchH
Confidence            367789999999999975321     111  00  0   00245789999999999875 999999998           


Q ss_pred             ----ccccHHHHHHhhcCCCceeeeEEec-----cCeeee---CCceeeeccccCCCCCcEEEEECCC
Q 022460          207 ----QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFA---DGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       207 ----~~~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                          ...++..+++.+.-.   |...++.     +.+...   ...|.+=++.+|.+.+++|+|+|++
T Consensus        79 ~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~  143 (176)
T 2fpr_A           79 DFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA  143 (176)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSH
T ss_pred             hhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence                577888888887654   7766553     333322   2345556778899999999999997

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.11  E-value=2.8e-06  Score=70.55  Aligned_cols=103  Identities=17%  Similarity=0.139  Sum_probs=72.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc-------------
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS-------------  208 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~-------------  208 (297)
                      +.++||+||||+.....      |.-.      .  -.+...|++.++|+++.+. +.++|.|.+..             
T Consensus         2 k~v~~D~DGtL~~~~~~------~~~~------~--~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~   67 (179)
T 3l8h_A            2 KLIILDRDGVVNQDSDA------FVKS------P--DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNA   67 (179)
T ss_dssp             CEEEECSBTTTBCCCTT------CCCS------G--GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHH
T ss_pred             CEEEEcCCCccccCCCc------cCCC------H--HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHH
Confidence            57899999999975311      1000      0  0145789999999999876 99999999986             


Q ss_pred             --ccHHHHHHhhcCCCceeeeEEec-----cCeeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          209 --IYAGQLLDILDPNQTLIGQRVYR-----DSCVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 --~YA~~Il~~LDP~~~~f~~rL~R-----d~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                        .++..+++.+.   .+|...++.     +.|...+   ..|.+=++.+|.+++++++|.|++
T Consensus        68 ~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~  128 (179)
T 3l8h_A           68 IHDKMHRALAQMG---GVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL  128 (179)
T ss_dssp             HHHHHHHHHHHTT---CCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH
T ss_pred             HHHHHHHHHHhCC---CceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence              56677777765   356665542     3333221   235556677899999999999997

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=97.94  E-value=7.3e-06  Score=67.23  Aligned_cols=102  Identities=11%  Similarity=0.017  Sum_probs=71.7

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++|+||||+.+...          +  .. .....-..+|+..++|+++.+. +.++|.|++...++..+++.+.-
T Consensus         9 ~k~v~~DlDGTL~~~~~~----------~--~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl   75 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLY----------Y--TE-HGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGV   75 (162)
T ss_dssp             CCEEEECCTTTTSCSEEE----------E--ET-TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTC
T ss_pred             eeEEEEecCcceECCcee----------e--cC-CCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCC
Confidence            468999999999975321          0  00 1123345679999999999975 99999999999999999999865


Q ss_pred             CCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       221 ~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .. +|..      .......+.+-+..+|.+.++++.|.|++.
T Consensus        76 ~~-~~~~------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~  111 (162)
T 2p9j_A           76 EE-IYTG------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV  111 (162)
T ss_dssp             CE-EEEC------C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred             Hh-hccC------CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            53 4532      111111233445567888999999999973

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=97.84  E-value=1e-05  Score=68.72  Aligned_cols=83  Identities=6%  Similarity=-0.011  Sum_probs=66.1

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCC-c
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLA-R  254 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~-~  254 (297)
                      .+..+|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|+..+..+.+.....   .+.+=++.+|.+.+ +
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  179 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE  179 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-heeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence            356899999999999976 9999999999999999999987654 6887777665443221   34455667799998 9


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      ++.|+|++.
T Consensus       180 ~v~vGD~~~  188 (231)
T 3kzx_A          180 VFFIGDSIS  188 (231)
T ss_dssp             EEEEESSHH
T ss_pred             EEEEcCCHH
Confidence            999999983

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.83  E-value=2.2e-06  Score=72.13  Aligned_cols=82  Identities=12%  Similarity=0.138  Sum_probs=63.3

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee--------CC-----ceeeecc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA--------DG-----EYLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~--------~g-----~~iKDLs  246 (297)
                      +..+|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|...+..++....        .+     .+.+=+.
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~  152 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR  152 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence            56899999999999986 9999999999999999999997664 78877654431110        11     2334455


Q ss_pred             ccCCCCCcEEEEECCCc
Q 022460          247 ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp~  263 (297)
                      .+|.++++++.|+|++.
T Consensus       153 ~~g~~~~~~i~vGDs~~  169 (217)
T 3m1y_A          153 LLNISKTNTLVVGDGAN  169 (217)
T ss_dssp             HHTCCSTTEEEEECSGG
T ss_pred             HcCCCHhHEEEEeCCHH
Confidence            66999999999999974

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=97.79  E-value=1.9e-05  Score=66.34  Aligned_cols=83  Identities=16%  Similarity=0.100  Sum_probs=63.7

Q ss_pred             EEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCcee--eeEEeccCeeeeC--C-ceeeeccccCCCC
Q 022460          179 VFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFAD--G-EYLKDLTILGRDL  252 (297)
Q Consensus       179 ~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f--~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl  252 (297)
                      ......|++.++|+.+.+. +.++|.|.+...++..+++.+.-.. +|  ...+..+. ....  + .+.+=+..+|.+.
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~  144 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSP  144 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCG
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCH
Confidence            4567899999999999976 9999999999999999999987653 56  55554443 2111  1 3445556779999


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      ++++.|+|++.
T Consensus       145 ~~~i~iGD~~~  155 (205)
T 3m9l_A          145 SRMVMVGDYRF  155 (205)
T ss_dssp             GGEEEEESSHH
T ss_pred             HHEEEECCCHH
Confidence            99999999973

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=97.74  E-value=1.3e-05  Score=69.34  Aligned_cols=104  Identities=17%  Similarity=0.132  Sum_probs=71.5

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc------------
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ------------  207 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~------------  207 (297)
                      +.+.+++|+||||+....       +.-     . .  -.+...|++.++|+++.+. +.++|.|++.            
T Consensus        24 ~~k~v~~D~DGTL~~~~~-------~~~-----~-~--~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~   88 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHG-------YVH-----E-I--DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQF   88 (211)
T ss_dssp             CBCEEEECSBTTTBCCCS-------SCC-----S-G--GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHH
T ss_pred             cCCEEEEcCCCCeECCCC-------ccc-----C-c--ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHH
Confidence            456899999999997431       100     0 0  0134689999999999875 9999999998            


Q ss_pred             ---cccHHHHHHhhcCCCceeeeEEecc------------CeeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          208 ---SIYAGQLLDILDPNQTLIGQRVYRD------------SCVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       208 ---~~YA~~Il~~LDP~~~~f~~rL~Rd------------~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                         ..++..+++.+.-.   |...++..            .+...+   ..+.+=++.+|.+.+++++|.|++
T Consensus        89 ~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~  158 (211)
T 2gmw_A           89 ETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL  158 (211)
T ss_dssp             HHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH
T ss_pred             HHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH
Confidence               47888888887643   54444321            121111   123445567789999999999997

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=97.51  E-value=9e-05  Score=65.53  Aligned_cols=81  Identities=16%  Similarity=0.119  Sum_probs=63.9

Q ss_pred             EEeCccHHHHHHHHhc-Cc--EEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee----C---CceeeeccccCC
Q 022460          181 VRQRPYLHMFLEAVAS-MF--DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA----D---GEYLKDLTILGR  250 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~f--EIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~----~---g~~iKDLs~Lgr  250 (297)
                      +...|++.++|+.+.+ .+  .++|.|.+...++..+++.+.-.. +|+..++.+.....    .   ..+.+=+..+|.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            5679999999999987 58  999999999999999999987764 78887765543211    1   124455667799


Q ss_pred             CC-CcEEEEECCC
Q 022460          251 DL-ARIAIVDNTP  262 (297)
Q Consensus       251 dl-~~vVIIDDsp  262 (297)
                      +. +++|.|+|++
T Consensus       220 ~~~~~~i~vGD~~  232 (282)
T 3nuq_A          220 ARYENAYFIDDSG  232 (282)
T ss_dssp             CCGGGEEEEESCH
T ss_pred             CCcccEEEEcCCH
Confidence            98 9999999997

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=97.48  E-value=2.4e-05  Score=67.51  Aligned_cols=106  Identities=11%  Similarity=0.021  Sum_probs=68.1

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      ..+.++||+||||+.-.... ....+.      .   ...+...||+.++|++|.+ .+.+.|-|+..+..+..++.   
T Consensus         5 ~~kav~fDlDGTL~d~~~~~-~~~~~~------~---~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---   71 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQA-ATSDTP------D---DEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---   71 (196)
T ss_dssp             CCSCEEEETBTTTBCTTSTT-TSCSSC------C---GGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---
T ss_pred             cCCEEEEcCCCceEeccccc-cchhhc------c---cccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---
Confidence            34689999999998611100 001110      0   0013467999999999976 59999999888777754443   


Q ss_pred             CCCceeeeEEeccCeeeeC---CceeeeccccCCCC-CcEEEEECCC
Q 022460          220 PNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDL-ARIAIVDNTP  262 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl-~~vVIIDDsp  262 (297)
                         .+|+..+..++....+   ..+.+-+..+|.+. +++|+|.|++
T Consensus        72 ---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~  115 (196)
T 2oda_A           72 ---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDP  115 (196)
T ss_dssp             ---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCH
T ss_pred             ---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCH
Confidence               2455555555433222   23556677788764 8999999997

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.34  E-value=8.8e-05  Score=69.01  Aligned_cols=82  Identities=15%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee--------C-----Cceeeecc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA--------D-----GEYLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~--------~-----g~~iKDLs  246 (297)
                      +..+||+.++|+++.+. +.++|.|++...+++.+++.+.-.. +|...+..+...+.        .     ..+.+=+.
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~  256 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA  256 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence            56899999999999875 9999999999999999999987653 67766543221110        0     11334445


Q ss_pred             ccCCCCCcEEEEECCCc
Q 022460          247 ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp~  263 (297)
                      .+|.+.++++.|.|++.
T Consensus       257 ~lgv~~~~~i~VGDs~~  273 (317)
T 4eze_A          257 RLNIATENIIACGDGAN  273 (317)
T ss_dssp             HHTCCGGGEEEEECSGG
T ss_pred             HcCCCcceEEEEeCCHH
Confidence            66889999999999974

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.31  E-value=0.00032  Score=67.55  Aligned_cols=108  Identities=17%  Similarity=0.135  Sum_probs=74.7

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCc------------
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQ------------  207 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~------------  207 (297)
                      ..+.++||+||||+......    .|.  ..    . .-+...-||+.++|+.|.+. |.++|.|+..            
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~----~~~--~~----~-~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~  125 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGK----VFP--TS----P-SDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVF  125 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCS----SSC--SS----T-TCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHH
T ss_pred             CCeEEEEeCCCCccccCCCc----cCC--CC----H-HHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHH
Confidence            45699999999999753210    010  00    0 01223689999999999875 9999999965            


Q ss_pred             cccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccC----CCCCcEEEEECCC
Q 022460          208 SIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILG----RDLARIAIVDNTP  262 (297)
Q Consensus       208 ~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lg----rdl~~vVIIDDsp  262 (297)
                      ..++..+++.+.-   .|...+..+.|...+   +.+.+=+..+|    .+++++++|.|+.
T Consensus       126 ~~~~~~~l~~lgl---~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          126 KGKVEAVLEKLGV---PFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             HHHHHHHHHHHTS---CCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred             HHHHHHHHHHcCC---CEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence            2347788888754   377777777765433   23555566666    8899999999996

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=97.31  E-value=0.00019  Score=60.42  Aligned_cols=101  Identities=8%  Similarity=0.036  Sum_probs=69.7

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++|+||||+.+...          +  .. .....-...|...+.|+++.+ -+.++|.|.....++..+++.+.-
T Consensus         8 ik~i~~DlDGTL~~~~~~----------~--~~-~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl   74 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLH----------Y--DA-NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGI   74 (180)
T ss_dssp             CCEEEEECTTTTSCSEEE----------E--ET-TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred             CeEEEEeCCCCcCCCCee----------e--cc-CcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCC
Confidence            468999999999975321          0  00 112233467888899999986 499999999999999999999876


Q ss_pred             CCceeeeEEeccCeeeeCCc-eeeeccccCCCCCcEEEEECCCc
Q 022460          221 NQTLIGQRVYRDSCVFADGE-YLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       221 ~~~~f~~rL~Rd~C~~~~g~-~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .. +|..      +. .++. +.+=+..+|.+.++++.|.|++.
T Consensus        75 ~~-~~~~------~k-~k~~~~~~~~~~~~~~~~~~~~vGD~~~  110 (180)
T 1k1e_A           75 KL-FFLG------KL-EKETACFDLMKQAGVTAEQTAYIGDDSV  110 (180)
T ss_dssp             CE-EEES------CS-CHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             ce-eecC------CC-CcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            53 4422      11 1112 22234456888899999999973

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=97.26  E-value=0.00013  Score=59.81  Aligned_cols=102  Identities=12%  Similarity=-0.016  Sum_probs=67.3

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++|+||||+........          .+ ..-..+..++++  .|+.+.+. +.++|.|.+...+++.+++.+.-
T Consensus         4 ik~vifD~DGTL~~~~~~~~~----------~~-~~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl   70 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGGMFYDQ----------TG-NEWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKV   70 (164)
T ss_dssp             CCEEEECSTTTTSSSEEEECS----------SS-CEEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTC
T ss_pred             ceEEEEcCCCceEcCcEEEcC----------CC-cEEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCC
Confidence            458999999999985421100          00 001123344443  78888865 99999999999999999999865


Q ss_pred             CCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       221 ~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .. +|...      ......+.+=++.+|.++++++.|.|++.
T Consensus        71 ~~-~~~~~------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~  106 (164)
T 3e8m_A           71 DY-LFQGV------VDKLSAAEELCNELGINLEQVAYIGDDLN  106 (164)
T ss_dssp             SE-EECSC------SCHHHHHHHHHHHHTCCGGGEEEECCSGG
T ss_pred             CE-eeccc------CChHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            53 44321      11112233445567889999999999984

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.26  E-value=2.8e-05  Score=66.20  Aligned_cols=81  Identities=7%  Similarity=0.040  Sum_probs=56.3

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC-ceeeeEEecc---------C----ee--eeCCceee
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYRD---------S----CV--FADGEYLK  243 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~-~~f~~rL~Rd---------~----C~--~~~g~~iK  243 (297)
                      +..+||+.++|+.+.+. +.++|.|++...++..+++.+.-.. .+|...++-+         .    |.  .....+.+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            56899999999999875 9999999999999999999987653 4777665211         1    00  00001222


Q ss_pred             eccccCCCCCcEEEEECCCc
Q 022460          244 DLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       244 DLs~Lgrdl~~vVIIDDsp~  263 (297)
                      =+..+|.  ++++.|.|++.
T Consensus       165 ~~~~~~~--~~~~~vGDs~~  182 (225)
T 1nnl_A          165 LKEKFHF--KKIIMIGDGAT  182 (225)
T ss_dssp             HHHHHCC--SCEEEEESSHH
T ss_pred             HHHHcCC--CcEEEEeCcHH
Confidence            2233454  78999999973

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.19  E-value=0.00024  Score=60.53  Aligned_cols=103  Identities=12%  Similarity=-0.017  Sum_probs=67.7

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +.+.+++|+||||+.+...-          ...+ ..-..+..+++.  +|+++.+ .+.++|-|++.+..++.+++.+.
T Consensus        18 ~ik~vifD~DGTL~d~~~~~----------~~~~-~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   84 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYF----------MEDG-SEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIVERRAKSLG   84 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEE----------ETTS-CEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             hCCEEEEcCCCCcCCccEee----------ccCC-cEeeeeccccHH--HHHHHHHCCCEEEEEECcChHHHHHHHHHcC
Confidence            34689999999999763210          0011 111123344444  8899986 49999999999999999999997


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      -.. +|...      ......+.+=+..+|.+.++++.|.|++.
T Consensus        85 l~~-~f~~~------~~K~~~~~~~~~~~g~~~~~~~~vGD~~n  121 (189)
T 3mn1_A           85 IEH-LFQGR------EDKLVVLDKLLAELQLGYEQVAYLGDDLP  121 (189)
T ss_dssp             CSE-EECSC------SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             CHH-HhcCc------CChHHHHHHHHHHcCCChhHEEEECCCHH
Confidence            653 45432      10011223334466889999999999974

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=97.11  E-value=0.00027  Score=60.89  Aligned_cols=103  Identities=18%  Similarity=0.085  Sum_probs=68.6

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcc------------
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS------------  208 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~------------  208 (297)
                      .+.+++|+||||+....       |.-     . .  -.....|++.++|+++.+ -+.++|.|.+..            
T Consensus        31 ~k~i~~D~DGtl~~~~~-------y~~-----~-~--~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~   95 (218)
T 2o2x_A           31 LPALFLDRDGTINVDTD-------YPS-----D-P--AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFA   95 (218)
T ss_dssp             CCCEEECSBTTTBCCCS-------CTT-----C-G--GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHH
T ss_pred             CCEEEEeCCCCcCCCCc-------ccC-----C-c--ccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHH
Confidence            46889999999987521       100     0 0  013468999999999986 599999999987            


Q ss_pred             ---ccHHHHHHhhcCCCceeeeEEec------------cCeeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          209 ---IYAGQLLDILDPNQTLIGQRVYR------------DSCVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 ---~YA~~Il~~LDP~~~~f~~rL~R------------d~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                         .++..+++.+.-.   |...+..            +.+...+   ..+.+=++.+|.+.+++++|.|+.
T Consensus        96 ~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~  164 (218)
T 2o2x_A           96 AVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL  164 (218)
T ss_dssp             HHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH
T ss_pred             HHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH
Confidence               6777788776432   3332221            2222111   123444566788999999999997

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.09  E-value=0.0016  Score=56.61  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEEC
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDD  260 (297)
                      ..+|++.++|+.+.+. +.++|.|.+.+.++..+++.+.-.. +|...+..     .++..+|.+-...    +++.|-|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~~~~~-----~k~~~~k~~~~~~----~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFAEVLPH-----EKAEKVKEVQQKY----VTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECSCCGG-----GHHHHHHHHHTTS----CEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhHhcCHH-----HHHHHHHHHHhcC----CEEEEeC
Confidence            6899999999999875 9999999999999999999987653 44432221     1223334332222    6788888


Q ss_pred             CC
Q 022460          261 TP  262 (297)
Q Consensus       261 sp  262 (297)
                      ++
T Consensus       214 ~~  215 (280)
T 3skx_A          214 GV  215 (280)
T ss_dssp             TT
T ss_pred             Cc
Confidence            86

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=96.98  E-value=0.00032  Score=59.04  Aligned_cols=102  Identities=18%  Similarity=0.033  Sum_probs=65.7

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +-+.++||+||||+.....        +.  ..+.. -..+..++++  +|+++.+ .+.++|.|++...++..+++.+.
T Consensus        11 ~~k~vifD~DGTL~d~~~~--------~~--~~~~~-~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   77 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVL--------ID--SDGRE-FVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLK   77 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCE--------EC--TTCCE-EEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCcCcCCEe--------ec--CCccH-hHhcccccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcC
Confidence            3468999999999983210        00  00111 1122344444  7888876 49999999999999999999986


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      -.  +|...      ......+.+=+..+|.++++++.|-|+..
T Consensus        78 i~--~~~~~------~~k~~~l~~~~~~~~~~~~~~~~vGD~~n  113 (176)
T 3mmz_A           78 IP--VLHGI------DRKDLALKQWCEEQGIAPERVLYVGNDVN  113 (176)
T ss_dssp             CC--EEESC------SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             Ce--eEeCC------CChHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence            54  33321      11111223344566888999999999973

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=96.89  E-value=0.00057  Score=57.90  Aligned_cols=103  Identities=16%  Similarity=0.041  Sum_probs=65.2

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .+.+.+++|+||||++....-          ...+... ..+..+++  .+|+.+.+. +.++|.|......+..+++.+
T Consensus        24 ~~ik~vifD~DGTL~~~~~~~----------~~~~~~~-~~~~~~d~--~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l   90 (188)
T 2r8e_A           24 ENIRLLILDVDGVLSDGLIYM----------GNNGEEL-KAFNVRDG--YGIRCALTSDIEVAIITGRKAKLVEDRCATL   90 (188)
T ss_dssp             HTCSEEEECCCCCCBCSEEEE----------ETTSCEE-EEEEHHHH--HHHHHHHTTTCEEEEECSSCCHHHHHHHHHH
T ss_pred             hcCCEEEEeCCCCcCCCCEEe----------cCCCcEE-EEeecccH--HHHHHHHHCCCeEEEEeCCChHHHHHHHHHc
Confidence            355789999999999743100          0001100 11222222  488888865 999999999999999999998


Q ss_pred             cCCCceeeeEEeccCeeeeCC-ceeeeccccCCCCCcEEEEECCCc
Q 022460          219 DPNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       219 DP~~~~f~~rL~Rd~C~~~~g-~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .-.. +|..       ...++ .+.+=+..+|.+.++++.|.|++.
T Consensus        91 gl~~-~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~  128 (188)
T 2r8e_A           91 GITH-LYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLI  128 (188)
T ss_dssp             TCCE-EECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGG
T ss_pred             CCce-eecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence            6542 3321       11112 222334556888899999999973

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=96.83  E-value=0.00083  Score=58.93  Aligned_cols=103  Identities=15%  Similarity=0.065  Sum_probs=67.5

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +-+.++|||||||+.+...          +...+.. -..+..++++  +|+.+.+ .+.++|.|+.....|..+++.+.
T Consensus        48 ~ik~viFDlDGTL~Ds~~~----------~~~~~~~-~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lg  114 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIY----------MGNQGEE-LKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLG  114 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEE----------EETTSCE-EEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCEECCHHH----------HhhhhHH-HHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            3468999999999987421          0001111 1123345555  8888886 49999999999999999999997


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      -.. +|...      ......+.+=++.+|.+.++++.|-|+..
T Consensus       115 i~~-~f~~~------k~K~~~l~~~~~~lg~~~~~~~~vGDs~n  151 (211)
T 3ij5_A          115 ITH-LYQGQ------SDKLVAYHELLATLQCQPEQVAYIGDDLI  151 (211)
T ss_dssp             CCE-EECSC------SSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             Cch-hhccc------CChHHHHHHHHHHcCcCcceEEEEcCCHH
Confidence            653 44422      11111222334566888999999999873

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=96.76  E-value=0.00022  Score=61.04  Aligned_cols=103  Identities=15%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +-+.++||+||||+........          .+... ..+..++++  -|+.+.+. +.++|.|......+..+++.+.
T Consensus        18 ~ik~vifD~DGtL~~~~~~~~~----------~~~~~-~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lg   84 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHIDN----------HGNEL-KSFHVQDGM--GLKLLMAAGIQVAIITTAQNAVVDHRMEQLG   84 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEECT----------TCCEE-CCBCHHHHH--HHHHHHHTTCEEEEECSCCSHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCCCCCceeecC----------Cchhh-hhccccChH--HHHHHHHCCCeEEEEeCcChHHHHHHHHHcC
Confidence            3468999999999874210000          00000 001122222  38888764 9999999999999999999986


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      -.. +|...      ......+.+-+..+|.++++++.|.|++.
T Consensus        85 l~~-~~~~~------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~  121 (191)
T 3n1u_A           85 ITH-YYKGQ------VDKRSAYQHLKKTLGLNDDEFAYIGDDLP  121 (191)
T ss_dssp             CCE-EECSC------SSCHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred             Ccc-ceeCC------CChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence            543 33321      11112233445567889999999999973

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=96.71  E-value=0.00023  Score=61.70  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=63.6

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHH-------HHHHhcC-cEEEEEcCCccccHH
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMF-------LEAVASM-FDVVIFTAGQSIYAG  212 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eF-------L~~ls~~-fEIvIfTas~~~YA~  212 (297)
                      +.+.++||+||||+.+....                    -..+|.+.+|       |+.+.+. +.++|.|+.....+.
T Consensus        24 ~ik~vifD~DGtL~d~~~~~--------------------~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~   83 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYM--------------------GNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVE   83 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEE--------------------CTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHH
T ss_pred             CCCEEEEcCCCCcCCCcEEE--------------------ccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHH
Confidence            35699999999999853210                    0012333334       8888764 999999999999999


Q ss_pred             HHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          213 QLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       213 ~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .+++.+.-.. +|...      ......+.+=+..+|.++++++.|.|+..
T Consensus        84 ~~l~~lgi~~-~~~~~------k~k~~~~~~~~~~~~~~~~~~~~vGD~~n  127 (195)
T 3n07_A           84 NRMKALGISL-IYQGQ------DDKVQAYYDICQKLAIAPEQTGYIGDDLI  127 (195)
T ss_dssp             HHHHHTTCCE-EECSC------SSHHHHHHHHHHHHCCCGGGEEEEESSGG
T ss_pred             HHHHHcCCcE-EeeCC------CCcHHHHHHHHHHhCCCHHHEEEEcCCHH
Confidence            9999986542 33211      11111222334456889999999999973

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=96.66  E-value=0.00016  Score=68.96  Aligned_cols=82  Identities=10%  Similarity=0.057  Sum_probs=60.8

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---C-----C-----ceeeecc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---D-----G-----EYLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~-----g-----~~iKDLs  246 (297)
                      +..+||+.++|+.+.+. +.++|.|.+...+++.+++.+.-. .+|...+.-.+..+.   .     +     .+.+=+.
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~  333 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD-YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ  333 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS-EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc-ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence            47899999999999976 999999999999999999999775 356654432222211   0     0     1233345


Q ss_pred             ccCCCCCcEEEEECCCc
Q 022460          247 ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp~  263 (297)
                      .+|.++++++.|.|++.
T Consensus       334 ~~gi~~~~~i~vGD~~~  350 (415)
T 3p96_A          334 RAGVPMAQTVAVGDGAN  350 (415)
T ss_dssp             HHTCCGGGEEEEECSGG
T ss_pred             HcCcChhhEEEEECCHH
Confidence            66889999999999983

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=96.58  E-value=0.0012  Score=55.54  Aligned_cols=82  Identities=20%  Similarity=0.203  Sum_probs=68.7

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+ .+.+.|.|++.+.++..+++.+.-.+ +|+..+..+.....+   ..|.+=++++|.+++++|
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  161 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV  161 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cccccccccccCCCcccHHHHHHHHHhhCCCccceE
Confidence            4678999999999975 59999999999999999999998774 799888877654432   246677888899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       162 ~VgDs~~  168 (216)
T 3kbb_A          162 VFEDSKS  168 (216)
T ss_dssp             EEECSHH
T ss_pred             EEecCHH
Confidence            9999973

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=96.42  E-value=0.00062  Score=57.37  Aligned_cols=39  Identities=13%  Similarity=0.037  Sum_probs=34.2

Q ss_pred             EEeCccHHHHHHHHhcC--cEEEEEcCCccccHHHHHHhhc
Q 022460          181 VRQRPYLHMFLEAVASM--FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~--fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +...||+.++|+.+.+.  +.++|.|++...++..+++.+.
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g  112 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR  112 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence            45789999999999974  9999999999999988888764

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=96.35  E-value=0.0068  Score=50.70  Aligned_cols=62  Identities=13%  Similarity=0.299  Sum_probs=46.9

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||+......         +          -..-|.+.+.|+.+.+. +.|+|+|.-.......+++.++.
T Consensus         3 ~k~i~~DlDGTL~~~~~~~---------i----------~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~   63 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYPR---------I----------GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA   63 (142)
T ss_dssp             CCEEEECCBTTTBCSCTTS---------C----------CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             CeEEEEECcCCCCCCCCcc---------c----------cccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence            4589999999999842110         0          01358999999999764 99999999877777778888877


Q ss_pred             CC
Q 022460          221 NQ  222 (297)
Q Consensus       221 ~~  222 (297)
                      .|
T Consensus        64 ~g   65 (142)
T 2obb_A           64 RG   65 (142)
T ss_dssp             TT
T ss_pred             cC
Confidence            76

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=96.12  E-value=0.0043  Score=50.70  Aligned_cols=81  Identities=14%  Similarity=0.098  Sum_probs=65.0

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+++.+. +.++|.|++...++..+++.+.-.+ +|+..+..+......  + .+.+=+..+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  166 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL  166 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-heeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence            35799999999999876 9999999999999999999987654 688777766543322  1 24455667799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       167 ~iGD~~  172 (214)
T 3e58_A          167 IIEDSE  172 (214)
T ss_dssp             EEECSH
T ss_pred             EEeccH
Confidence            999996

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=96.08  E-value=0.00068  Score=59.06  Aligned_cols=73  Identities=4%  Similarity=-0.103  Sum_probs=46.0

Q ss_pred             eCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe-cc----C-eeeeCCceeeeccccCCCCCcE
Q 022460          183 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RD----S-CVFADGEYLKDLTILGRDLARI  255 (297)
Q Consensus       183 ~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~-Rd----~-C~~~~g~~iKDLs~Lgrdl~~v  255 (297)
                      ..|++.++|+.+.+ -+.++|-|++....+..+++.|..   +|+.... .+    . .......+.+-+..+|.    +
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~---~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~  161 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLAD---NFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R  161 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHH---HTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHH---hcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence            57899999999986 599999999988877777766532   2222100 00    0 01111233344445554    9


Q ss_pred             EEEECCC
Q 022460          256 AIVDNTP  262 (297)
Q Consensus       256 VIIDDsp  262 (297)
                      ++|+|++
T Consensus       162 l~VGDs~  168 (211)
T 2b82_A          162 IFYGDSD  168 (211)
T ss_dssp             EEEESSH
T ss_pred             EEEECCH
Confidence            9999997

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.06  E-value=0.0051  Score=51.47  Aligned_cols=81  Identities=10%  Similarity=0.122  Sum_probs=65.6

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.+.-.. +|+..+..+.+.....   .+.+=++.+|.+++++|.
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  184 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLM  184 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            567999999999999889999999999999999999986654 6887777665443222   244556778999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       185 iGD~~  189 (240)
T 3qnm_A          185 IGDSW  189 (240)
T ss_dssp             EESCT
T ss_pred             ECCCc
Confidence            99996

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=96.05  E-value=0.0046  Score=52.17  Aligned_cols=81  Identities=12%  Similarity=0.081  Sum_probs=64.1

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|+..+..+.+.....   .+.+=+..+|.++++++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  172 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  172 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            45789999999999875 9999999999999999999887653 6877777665443222   24445567799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|.|++
T Consensus       173 ~iGD~~  178 (232)
T 1zrn_A          173 FVASNA  178 (232)
T ss_dssp             EEESCH
T ss_pred             EEeCCH
Confidence            999997

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=96.00  E-value=0.0036  Score=55.26  Aligned_cols=80  Identities=10%  Similarity=0.096  Sum_probs=65.3

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...||+.++|+.+.+.+.++|.|++.+.++..+++.+.-.. +|+..+..+.+...+.   .|.+=+..+|.+++++++
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  198 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM  198 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            356799999999999889999999999999999999997764 7888777666443222   355666778999999999


Q ss_pred             EECC
Q 022460          258 VDNT  261 (297)
Q Consensus       258 IDDs  261 (297)
                      |+|+
T Consensus       199 vGDs  202 (260)
T 2gfh_A          199 VGDT  202 (260)
T ss_dssp             EESC
T ss_pred             ECCC
Confidence            9996

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.00  E-value=0.014  Score=46.73  Aligned_cols=63  Identities=27%  Similarity=0.294  Sum_probs=44.3

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCcccc-----------
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIY-----------  210 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~Y-----------  210 (297)
                      +.+++||||||+......     +      .      -+...|+..+.|+.+.+ -+.++|.|......           
T Consensus         2 k~i~~DlDGTL~~~~~~~-----~------~------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~   64 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSD-----Y------R------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (126)
T ss_dssp             CEEEECSTTTTBCCCCSC-----G------G------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEecCCCCCCCCCCc-----c------c------cCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHH
Confidence            478999999999753210     0      0      01346889999999975 58999999776543           


Q ss_pred             -HHHHHHhhcCCC
Q 022460          211 -AGQLLDILDPNQ  222 (297)
Q Consensus       211 -A~~Il~~LDP~~  222 (297)
                       +..+++.+...+
T Consensus        65 ~~~~i~~~~~~~~   77 (126)
T 1xpj_A           65 TLPIITEWLDKHQ   77 (126)
T ss_dssp             THHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcC
Confidence             567888876655

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=95.99  E-value=0.0066  Score=50.97  Aligned_cols=82  Identities=15%  Similarity=0.122  Sum_probs=65.8

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|.+...++..+++.+.-.. +|+..+..+.+.....   .+.+=+..+|.++++++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL  176 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence            56789999999999976 9999999999999999999887654 6877777665443322   24555667799999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|+..
T Consensus       177 ~vGD~~~  183 (233)
T 3umb_A          177 FVSSNGW  183 (233)
T ss_dssp             EEESCHH
T ss_pred             EEeCCHH
Confidence            9999963

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=95.95  E-value=0.0069  Score=50.75  Aligned_cols=81  Identities=11%  Similarity=0.021  Sum_probs=65.1

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccC-CCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILG-RDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lg-rdl~~vV  256 (297)
                      ....|++.++|+.+.+.+.++|.|.+...++..+++.+.-. .+|+..+..+.+.....   .+.+=+..+| .++++++
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  180 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLF-PFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL  180 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCG-GGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChH-hhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeE
Confidence            46789999999999877999999999999999999998655 36887777665443222   2445567789 8999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       181 ~vGD~~  186 (238)
T 3ed5_A          181 IIGDSL  186 (238)
T ss_dssp             EEESCT
T ss_pred             EECCCc
Confidence            999997

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=95.94  E-value=0.0052  Score=51.21  Aligned_cols=82  Identities=13%  Similarity=0.107  Sum_probs=61.4

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceee-eEEeccCeee------eCCceeeeccccCCCCC
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVF------ADGEYLKDLTILGRDLA  253 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~-~rL~Rd~C~~------~~g~~iKDLs~Lgrdl~  253 (297)
                      +..+||+.++|+.+.+.+.++|.|++...++..+++.+.-.. +|. ...+.++...      ....+.+=++.+|...+
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~  146 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence            457999999999999779999999999999999999987764 674 4444333211      11234444566677788


Q ss_pred             cEEEEECCCc
Q 022460          254 RIAIVDNTPQ  263 (297)
Q Consensus       254 ~vVIIDDsp~  263 (297)
                      +++.|.|++.
T Consensus       147 ~~~~iGD~~~  156 (206)
T 1rku_A          147 RVIAAGDSYN  156 (206)
T ss_dssp             EEEEEECSST
T ss_pred             EEEEEeCChh
Confidence            9999999974

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=95.94  E-value=0.0034  Score=52.21  Aligned_cols=82  Identities=10%  Similarity=0.039  Sum_probs=64.6

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..+|++.++|+.+.+.+.++|.|++...++..+++.+.-. .+|+..+..+.+...+  + .+.+=++.+|.+.++++.
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFM-MRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGG-GGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChH-hhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            56899999999999866999999999999999999988654 3688777766554332  2 234455677999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       161 vGD~~~  166 (209)
T 2hdo_A          161 IGDSVS  166 (209)
T ss_dssp             EESSHH
T ss_pred             ECCChh
Confidence            999963

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=95.92  E-value=0.0059  Score=51.01  Aligned_cols=82  Identities=17%  Similarity=0.128  Sum_probs=65.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+.+.+. +.++|.|.+...++..+++.+.-.. +|+..+..+......  + .+.+=+..+|.++++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i  168 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL  168 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEE
Confidence            56899999999999876 9999999999999999999986654 677777766543322  1 24455667899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       169 ~iGD~~~  175 (233)
T 3s6j_A          169 VIGDAIW  175 (233)
T ss_dssp             EEESSHH
T ss_pred             EEeCCHH
Confidence            9999973

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=95.90  E-value=0.004  Score=52.94  Aligned_cols=82  Identities=10%  Similarity=0.041  Sum_probs=65.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCC-CCcE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRD-LARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrd-l~~v  255 (297)
                      ...+|++.++|+.+.+. +.++|.|.+...++..+++.+.-.+ +|+..+..+.+.....   .+.+=+..+|.+ .+++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  187 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            46899999999999976 9999999999999999999987654 6887777665443221   234445667988 9999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      +.|+|++.
T Consensus       188 i~vGD~~~  195 (240)
T 3sd7_A          188 IMVGDRKY  195 (240)
T ss_dssp             EEEESSHH
T ss_pred             EEECCCHH
Confidence            99999973

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=95.87  E-value=0.0073  Score=54.62  Aligned_cols=74  Identities=20%  Similarity=0.157  Sum_probs=45.4

Q ss_pred             CCCcEEEEeCCcceeeeecc------CCC--CCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcccc
Q 022460          140 GLPITLVLDLDETLVHSSFD------NCK--DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIY  210 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~------~~~--~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~Y  210 (297)
                      .+.+.+|+||||||+.+..-      ...  ...|.-  ....    -.....||+.++|+.+.+. +.|+|-|......
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~  130 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDD--WINK----AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQ  130 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHH--HHHH----CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGG
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHH--HHHc----CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhH
Confidence            45679999999999986410      000  000100  0000    0134679999999999865 9999999987544


Q ss_pred             HH---HHHHhhc
Q 022460          211 AG---QLLDILD  219 (297)
Q Consensus       211 A~---~Il~~LD  219 (297)
                      ..   ..++.+.
T Consensus       131 ~~~~~~~L~~~G  142 (258)
T 2i33_A          131 LDATIKNLERVG  142 (258)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcC
Confidence            44   4444443

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=95.87  E-value=0.0044  Score=52.99  Aligned_cols=81  Identities=14%  Similarity=0.173  Sum_probs=64.1

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|+..+..+.+.....   .+.+=+..+|.++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i  171 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL  171 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            45789999999999875 9999999999999999999987653 6887777665433222   23444567799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       172 ~iGD~~  177 (241)
T 2hoq_A          172 MVGDRL  177 (241)
T ss_dssp             EEESCT
T ss_pred             EECCCc
Confidence            999997

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=95.85  E-value=0.0044  Score=52.31  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=63.8

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...||+.++|+.+.+.+.+.|.|++.+.++..+++.+.-.. +|+..+..+  ....   ..|.+=++++|.++++++.
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~  159 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAII  159 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-heeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEE
Confidence            457899999999998888999999999999999999987653 687777665  1111   1356667788999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       160 vgDs~  164 (210)
T 2ah5_A          160 IGDTK  164 (210)
T ss_dssp             EESSH
T ss_pred             ECCCH
Confidence            99997

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=95.78  E-value=0.0074  Score=51.35  Aligned_cols=82  Identities=26%  Similarity=0.308  Sum_probs=63.8

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+.+.+. +.++|.|++.+.++..+++.+.-. .+|+..+..+.+...+  + .+.+=++.+|.+.++++
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  160 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS-GYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKAL  160 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH-HHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEE
Confidence            56899999999999875 999999999999999999998754 3677777666543222  1 23444566788999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       161 ~vGD~~~  167 (222)
T 2nyv_A          161 IVGDTDA  167 (222)
T ss_dssp             EEESSHH
T ss_pred             EECCCHH
Confidence            9999963

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=95.73  E-value=0.0061  Score=51.92  Aligned_cols=81  Identities=16%  Similarity=0.173  Sum_probs=63.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|+..+..+.......   .+.+=++.+|.+.++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            35679999999999875 9999999999999999999886653 6777777665433222   24445567799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       183 ~iGD~~  188 (240)
T 2no4_A          183 FVSSNA  188 (240)
T ss_dssp             EEESCH
T ss_pred             EEeCCH
Confidence            999997

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=95.72  E-value=0.0066  Score=51.21  Aligned_cols=82  Identities=13%  Similarity=0.040  Sum_probs=65.1

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|.+...+++.+++.+.-.. +|+..+..+.+....  + .+.+=+..+|.++++++
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i  181 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCV  181 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-heeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            34789999999999975 9999999999999999999986553 677777766544322  1 24455667799999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       182 ~vGD~~~  188 (237)
T 4ex6_A          182 VIGDGVP  188 (237)
T ss_dssp             EEESSHH
T ss_pred             EEcCCHH
Confidence            9999973

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=95.71  E-value=0.0066  Score=50.71  Aligned_cols=81  Identities=11%  Similarity=0.080  Sum_probs=64.7

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|.+...++..+++.+.-.. +|+..+..+.+.....   .+.+=+..+|.+.++++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  173 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL  173 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence            45789999999999876 9999999999999999999886653 6887777665443221   24455667799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       174 ~iGD~~  179 (230)
T 3um9_A          174 FVSCNS  179 (230)
T ss_dssp             EEESCH
T ss_pred             EEeCCH
Confidence            999997

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=95.69  E-value=0.0076  Score=52.10  Aligned_cols=81  Identities=15%  Similarity=0.126  Sum_probs=62.9

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +..+|++.++|+.+.+. +.++|.|++...++..+++.+.-. .+|...+..+.+.....   .+.+=+..+|.+.++++
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  191 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID-HLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL  191 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch-heEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEE
Confidence            46789999999999875 999999999999999999998654 36777666655433221   23344566798999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|.|++
T Consensus       192 ~vGD~~  197 (243)
T 2hsz_A          192 FVGDSQ  197 (243)
T ss_dssp             EEESSH
T ss_pred             EEcCCH
Confidence            999997

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=95.63  E-value=0.0078  Score=51.70  Aligned_cols=80  Identities=9%  Similarity=0.069  Sum_probs=63.8

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+ .+.+.|.|++...++..+++.+...  +|+..+..+.+....  + .+.+=++.+|.+++++|
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~  186 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCV  186 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4578999999999986 4999999999999999999998754  588777766543322  1 34556677899999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|.|++
T Consensus       187 ~vGDs~  192 (240)
T 2hi0_A          187 YIGDSE  192 (240)
T ss_dssp             EEESSH
T ss_pred             EEcCCH
Confidence            999997

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=95.57  E-value=0.0066  Score=50.85  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=64.8

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ....|++.++|+.+.+.+.++|.|.+...++..+++.+.-.. +|+..+..+.+.....   .+.+=+..+|.++++++.
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-HcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence            457899999999998779999999999999999999886653 6877777665443322   244556677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       178 vGD~~  182 (234)
T 3u26_A          178 VGDNP  182 (234)
T ss_dssp             EESCT
T ss_pred             EcCCc
Confidence            99997

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=95.43  E-value=0.0043  Score=51.57  Aligned_cols=84  Identities=5%  Similarity=0.051  Sum_probs=64.1

Q ss_pred             EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHh------hcCCCceeeeEEeccCeeeeCC---ceeeeccccCC
Q 022460          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI------LDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGR  250 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~------LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgr  250 (297)
                      .+..+|++.++|+.+.+.+.++|.|++...++..+++.      +.-. .+|+..+..+.+.....   .+.+=+..+|.
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~  165 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDKVYASCQMGKYKPNEDIFLEMIADSGM  165 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSEEEEHHHHTCCTTSHHHHHHHHHHHCC
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCeEEeecccCCCCCCHHHHHHHHHHhCC
Confidence            45789999999999988899999999999998888887      3333 36777777655433322   24445567799


Q ss_pred             CCCcEEEEECCCcc
Q 022460          251 DLARIAIVDNTPQV  264 (297)
Q Consensus       251 dl~~vVIIDDsp~~  264 (297)
                      ++++++.|+|++.-
T Consensus       166 ~~~~~~~igD~~~D  179 (211)
T 2i6x_A          166 KPEETLFIDDGPAN  179 (211)
T ss_dssp             CGGGEEEECSCHHH
T ss_pred             ChHHeEEeCCCHHH
Confidence            99999999999853

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=95.33  E-value=0.011  Score=51.15  Aligned_cols=80  Identities=15%  Similarity=0.110  Sum_probs=64.3

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+. .+.++|.|++...++..+++.+.-. .+|+..+..+.+.....   .+.+=++.+|.++++++.
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLT-DSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCch-hhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            357899999999999 9999999999999999999998654 36887777665443322   244556677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       170 vGD~~  174 (253)
T 1qq5_A          170 VSSNG  174 (253)
T ss_dssp             EESCH
T ss_pred             EeCCh
Confidence            99997

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=95.31  E-value=0.014  Score=48.89  Aligned_cols=81  Identities=12%  Similarity=0.145  Sum_probs=61.3

Q ss_pred             EEeCccHHHHHHHHhcC--cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---C-ceeeeccccC--CCC
Q 022460          181 VRQRPYLHMFLEAVASM--FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---G-EYLKDLTILG--RDL  252 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~--fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g-~~iKDLs~Lg--rdl  252 (297)
                      +..+|++.++|+.+.+.  +.++|.|++...++..+++.+.... +|...++.+......   . .+.+=+..+|  .++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~  170 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPFGAFADDALDRNELPHIALERARRMTGANYSP  170 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCcceecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence            56889999999999976  9999999999999999999987664 677655544432111   0 1223345668  789


Q ss_pred             CcEEEEECCC
Q 022460          253 ARIAIVDNTP  262 (297)
Q Consensus       253 ~~vVIIDDsp  262 (297)
                      ++++.|.|++
T Consensus       171 ~~~i~iGD~~  180 (234)
T 2hcf_A          171 SQIVIIGDTE  180 (234)
T ss_dssp             GGEEEEESSH
T ss_pred             ccEEEECCCH
Confidence            9999999997

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=95.31  E-value=0.0057  Score=51.97  Aligned_cols=81  Identities=10%  Similarity=0.016  Sum_probs=62.7

Q ss_pred             eCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhh---cCCC--ceeeeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460          183 QRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL---DPNQ--TLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~L---DP~~--~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~  254 (297)
                      ..|++.++|+.+.+.+.++|.|++...++..+++.|   ..-|  .+|+..+..+.+...+.   .|.+=+..+|.++++
T Consensus       113 ~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~  192 (229)
T 4dcc_A          113 IPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKE  192 (229)
T ss_dssp             CCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             ccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            579999999999977999999999999999888776   4433  35777766665443332   345566677999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|+|+|++.
T Consensus       193 ~~~vGD~~~  201 (229)
T 4dcc_A          193 TFFIDDSEI  201 (229)
T ss_dssp             EEEECSCHH
T ss_pred             eEEECCCHH
Confidence            999999983

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=95.30  E-value=0.0059  Score=51.02  Aligned_cols=82  Identities=10%  Similarity=0.078  Sum_probs=64.3

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|++...+++.+++.+.-.. +|+..+..+.......   .+.+=++.+|.++++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-heeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            45789999999999875 9999999999999999999987653 6777777665432211   24455667799999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       164 ~iGD~~~  170 (226)
T 3mc1_A          164 MIGDREY  170 (226)
T ss_dssp             EEESSHH
T ss_pred             EECCCHH
Confidence            9999973

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=94.92  E-value=0.0089  Score=49.29  Aligned_cols=81  Identities=10%  Similarity=0.066  Sum_probs=62.0

Q ss_pred             EeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEEE
Q 022460          182 RQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVII  258 (297)
                      ...|++.++|+.+.+...++|.|++...++..+++.+.-. .+|+..+..+.+.....   .+.+=+..+|.++++++.|
T Consensus        86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v  164 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLG-EFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMV  164 (200)
T ss_dssp             CBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGG-GTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEe
Confidence            4789999999999875599999999999999999988654 35777666554332222   2444556779999999999


Q ss_pred             ECCCc
Q 022460          259 DNTPQ  263 (297)
Q Consensus       259 DDsp~  263 (297)
                      +|++.
T Consensus       165 gD~~~  169 (200)
T 3cnh_A          165 DDRLQ  169 (200)
T ss_dssp             ESCHH
T ss_pred             CCCHH
Confidence            99984

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=94.80  E-value=0.054  Score=48.52  Aligned_cols=93  Identities=11%  Similarity=0.087  Sum_probs=66.6

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      ...++.+|.|++++...                    ......+||+.++|+.+.+. +.++|.|++...++..+++.+.
T Consensus       142 g~~~i~~~~d~~~~~~~--------------------~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~g  201 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGII--------------------AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN  201 (287)
T ss_dssp             TCEEEEEEETTEEEEEE--------------------EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             CCeEEEEEECCEEEEEE--------------------EeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhC
Confidence            44577888887765421                    11245899999999999875 9999999999999999999986


Q ss_pred             CCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       220 P~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      -.. +|...+       .. ...+-+..++.+ +++++|.|++.
T Consensus       202 l~~-~f~~i~-------~~-~K~~~~~~l~~~-~~~~~vGDs~~  235 (287)
T 3a1c_A          202 LDL-VIAEVL-------PH-QKSEEVKKLQAK-EVVAFVGDGIN  235 (287)
T ss_dssp             CSE-EECSCC-------TT-CHHHHHHHHTTT-CCEEEEECTTT
T ss_pred             Cce-eeeecC-------hH-HHHHHHHHHhcC-CeEEEEECCHH
Confidence            542 443221       11 123445566777 99999999973

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=94.72  E-value=0.021  Score=47.46  Aligned_cols=79  Identities=13%  Similarity=0.078  Sum_probs=61.0

Q ss_pred             eCccHHHHHHHHhcC-cEEEEEcCCc---cccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcE
Q 022460          183 QRPYLHMFLEAVASM-FDVVIFTAGQ---SIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~-fEIvIfTas~---~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~v  255 (297)
                      .+|++.++|+.+.+. +.++|.|++.   ..++..+++.+.-.. +|+..+..+.......   .+.+=+..+|.+++++
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  178 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES  178 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-HhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence            489999999999876 9999999999   888888998886553 6777776554332221   2334456779999999


Q ss_pred             EEEECCC
Q 022460          256 AIVDNTP  262 (297)
Q Consensus       256 VIIDDsp  262 (297)
                      +.|+|++
T Consensus       179 ~~iGD~~  185 (235)
T 2om6_A          179 LHIGDTY  185 (235)
T ss_dssp             EEEESCT
T ss_pred             EEECCCh
Confidence            9999998

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=94.64  E-value=0.023  Score=50.40  Aligned_cols=80  Identities=11%  Similarity=0.038  Sum_probs=62.6

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC--CCceeeeEEeccCeeeeC---CceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP--NQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP--~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~  254 (297)
                      +...||+.++|+.+.+ .+.++|.|++...++..+++.++-  -..+|+..+.. .+. .+   ..|.+=++.+|.++++
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~  206 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNN  206 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCccc
Confidence            5678999999999975 699999999999999999987641  12468777666 443 22   2356667788999999


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      +|+|+|++
T Consensus       207 ~l~VgDs~  214 (261)
T 1yns_A          207 ILFLTDVT  214 (261)
T ss_dssp             EEEEESCH
T ss_pred             EEEEcCCH
Confidence            99999996

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=94.53  E-value=0.012  Score=48.70  Aligned_cols=79  Identities=13%  Similarity=0.056  Sum_probs=60.2

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...||+.+ |+.+.+.+.++|.|++...++..+++.+.-.. +|+..+..+.+...+.   .+.+=+..+|  +++++.
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~  148 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL  148 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence            357899999 99997559999999999999999999987653 6877777665443221   2344455668  889999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       149 vGD~~~  154 (201)
T 2w43_A          149 VSSNAF  154 (201)
T ss_dssp             EESCHH
T ss_pred             EeCCHH
Confidence            999973

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=94.51  E-value=0.033  Score=45.87  Aligned_cols=82  Identities=12%  Similarity=0.115  Sum_probs=62.7

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--Cc-eeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--GE-YLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g~-~iKDLs~Lgrdl~~vV  256 (297)
                      ...+|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +|...+..+......  +. +.+=+..+|.+.++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i  171 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  171 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            45789999999999875 9999999999999999999886553 677777765543222  22 3334456799999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|.|++.
T Consensus       172 ~iGD~~n  178 (226)
T 1te2_A          172 ALEDSVN  178 (226)
T ss_dssp             EEESSHH
T ss_pred             EEeCCHH
Confidence            9999973

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=94.49  E-value=0.015  Score=49.96  Aligned_cols=82  Identities=13%  Similarity=-0.006  Sum_probs=63.9

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeee-EEeccCee-eeC--C-ceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQ-RVYRDSCV-FAD--G-EYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~-rL~Rd~C~-~~~--g-~~iKDLs~Lgrdl~~  254 (297)
                      +..+|++.++|+.+.+ .+.++|.|++...++..+++.+.-.. +|.. .+..+... ...  + .+.+=+..+|.+.++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  187 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER  187 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence            5689999999999987 59999999999999999999886553 6777 55555443 222  1 244556677999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|.|+|++.
T Consensus       188 ~i~iGD~~~  196 (259)
T 4eek_A          188 CVVIEDSVT  196 (259)
T ss_dssp             EEEEESSHH
T ss_pred             EEEEcCCHH
Confidence            999999973

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=94.48  E-value=0.023  Score=49.64  Aligned_cols=80  Identities=8%  Similarity=-0.010  Sum_probs=62.5

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+. +.++|.|++.+ .+..+++.+.-.. +|...+..+.+.....   .+.+=+..+|.+++++|
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~  182 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLRE-HFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA  182 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGG-GCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHH-hhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            46899999999999876 99999999766 5788888887653 6887777665443222   35556677899999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       183 ~vGD~~  188 (263)
T 3k1z_A          183 HVGDNY  188 (263)
T ss_dssp             EEESCH
T ss_pred             EECCCc
Confidence            999997

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=94.47  E-value=0.04  Score=44.44  Aligned_cols=80  Identities=11%  Similarity=-0.013  Sum_probs=60.3

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      ...+|++.++|+.+.+. +.++|+|++...++. +++.+.-.. +|+..+..+.....+  . .+.+=+..+|.++++++
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~  161 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  161 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-heeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEE
Confidence            45799999999999875 999999999999998 888886553 677666655432221  1 12333456689999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       162 ~iGD~~  167 (207)
T 2go7_A          162 YIGDRT  167 (207)
T ss_dssp             EEESSH
T ss_pred             EECCCH
Confidence            999996

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=94.44  E-value=0.0093  Score=57.31  Aligned_cols=81  Identities=12%  Similarity=0.049  Sum_probs=62.1

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceee--eEEeccCee--------------eeCCceee
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIG--QRVYRDSCV--------------FADGEYLK  243 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~--~rL~Rd~C~--------------~~~g~~iK  243 (297)
                      +...||+.++|+.|.+. +.++|-|++...++..+++.+.-. .+|+  ..+..++..              .....|.+
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~-~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~  292 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL-PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG-GGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh-HhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence            45789999999999876 999999999999999999998654 3677  566544321              11223555


Q ss_pred             eccccC--------------CCCCcEEEEECCC
Q 022460          244 DLTILG--------------RDLARIAIVDNTP  262 (297)
Q Consensus       244 DLs~Lg--------------rdl~~vVIIDDsp  262 (297)
                      -+..+|              .+++++|+|+|++
T Consensus       293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~  325 (384)
T 1qyi_A          293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL  325 (384)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred             HHHHcCCccccccccccccCCCCcCeEEEcCCH
Confidence            566667              7889999999998

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=94.37  E-value=0.028  Score=47.55  Aligned_cols=79  Identities=13%  Similarity=0.071  Sum_probs=55.6

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      .+...|++.++|+++.+. +.++|.|++.. ++..+++.+.-.. +|+..+..+.+...+   ..|.+=++.+|.+.   
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFDALALSYEIKAVKPNPKIFGFALAKVGYPA---  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-HeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence            567899999999999975 99999999976 6888999887653 687777766543322   23445556667765   


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      +.|+|++.
T Consensus       168 ~~vgD~~~  175 (220)
T 2zg6_A          168 VHVGDIYE  175 (220)
T ss_dssp             EEEESSCC
T ss_pred             EEEcCCch
Confidence            99999986

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=94.36  E-value=0.019  Score=48.38  Aligned_cols=80  Identities=15%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCcee--eeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f--~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~  254 (297)
                      ....|++.++|+.+.+. +.++|.|++...++..+++. .-. .+|  +..+..+.+.....   .+.+=+..+|.++++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  184 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE  184 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST-TTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence            46789999999999876 99999999999999888887 444 367  66676665433221   245566677999999


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      +|.|+|++
T Consensus       185 ~i~vGD~~  192 (247)
T 3dv9_A          185 ALVIENAP  192 (247)
T ss_dssp             EEEEECSH
T ss_pred             eEEEeCCH
Confidence            99999997

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=94.34  E-value=0.02  Score=47.60  Aligned_cols=79  Identities=10%  Similarity=-0.042  Sum_probs=61.3

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeee---ccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKD---LTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKD---Ls~Lgrdl~~  254 (297)
                      +...|++.++|+.+.+.+.++|.|.+...++..+++.|.   .+|+..+..+.....+.   .|.+=   +..+|.++++
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~  174 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKD  174 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGG
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchh
Confidence            357899999999999889999999999999999988865   36777777654332221   12122   7788999999


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      +|.|+|++
T Consensus       175 ~~~vGD~~  182 (240)
T 3smv_A          175 ILHTAESL  182 (240)
T ss_dssp             EEEEESCT
T ss_pred             EEEECCCc
Confidence            99999996

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=94.34  E-value=0.019  Score=48.84  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=63.0

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCcee--eeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f--~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~  254 (297)
                      ....|++.++|+.+.+. +.++|.|.+...++..+++. .-. .+|  +..+..+.......   .+.+=++.+|.++++
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  185 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP-GMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE  185 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST-TTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH-HhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence            46789999999999876 99999999999998888887 444 367  66777665433221   355666778999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|.|+|++.
T Consensus       186 ~i~vGD~~~  194 (243)
T 3qxg_A          186 AVVIENAPL  194 (243)
T ss_dssp             EEEEECSHH
T ss_pred             eEEEeCCHH
Confidence            999999973

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=94.32  E-value=0.028  Score=48.24  Aligned_cols=82  Identities=15%  Similarity=-0.042  Sum_probs=63.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCC-CcE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDL-ARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl-~~v  255 (297)
                      +...|++.++|+.+.+. +.++|.|.+...++..+++.+.-.+..|+..+..+.+....  + .+.+=+..+|.+. +++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            46789999999999875 99999999999999999998765542266666665543321  1 2445566789999 999


Q ss_pred             EEEECCC
Q 022460          256 AIVDNTP  262 (297)
Q Consensus       256 VIIDDsp  262 (297)
                      |.|.|++
T Consensus       190 i~vGD~~  196 (277)
T 3iru_A          190 IKVDDTL  196 (277)
T ss_dssp             EEEESSH
T ss_pred             EEEcCCH
Confidence            9999997

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=94.25  E-value=0.032  Score=47.97  Aligned_cols=83  Identities=10%  Similarity=0.111  Sum_probs=56.2

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCe------eeeCCc-ee--------ee
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC------VFADGE-YL--------KD  244 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C------~~~~g~-~i--------KD  244 (297)
                      +..+||+.++|+.+.+ .+.++|.|++...++..+++.|.+...++........-      ...+.. +.        +=
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~~~  155 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  155 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCcHHHH
Confidence            5689999999999986 59999999999999999998543322233322221100      001111 12        45


Q ss_pred             ccccCCCCCcEEEEECCCc
Q 022460          245 LTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       245 Ls~Lgrdl~~vVIIDDsp~  263 (297)
                      ++.+|.+.++++.|.|++.
T Consensus       156 ~~~~~~~~~~~~~vGDs~~  174 (236)
T 2fea_A          156 IHELSEPNQYIIMIGDSVT  174 (236)
T ss_dssp             HHHHCCTTCEEEEEECCGG
T ss_pred             HHHHhccCCeEEEEeCChH
Confidence            5667889999999999974

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=94.20  E-value=0.042  Score=47.87  Aligned_cols=57  Identities=12%  Similarity=0.007  Sum_probs=46.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+....                       ...|...+.|+++.+ ...++|-|......+..+++.+...
T Consensus         6 kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A            6 RLAAIDVDGNLTDRDR-----------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             CEEEEEHHHHSBCTTS-----------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEECCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence            5899999999997411                       147889999999986 4899999999888899999888654


Q ss_pred             C
Q 022460          222 Q  222 (297)
Q Consensus       222 ~  222 (297)
                      +
T Consensus        63 ~   63 (227)
T 1l6r_A           63 G   63 (227)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=94.12  E-value=0.021  Score=47.16  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=60.7

Q ss_pred             EEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEE
Q 022460          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVII  258 (297)
                      +...|++.++|+.+.+  .+.++|.|.+...++..+++.+.-.. +|+..+....  .....+.+=+..+|.++++++.|
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~~~~~~k--pk~~~~~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDHIEVMSD--KTEKEYLRLLSILQIAPSELLMV  180 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSEEEEESC--CSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhheeeecCC--CCHHHHHHHHHHhCCCcceEEEE
Confidence            4678999999999987  69999999999999999999886653 5766654321  11112445556779999999999


Q ss_pred             ECCC
Q 022460          259 DNTP  262 (297)
Q Consensus       259 DDsp  262 (297)
                      +|++
T Consensus       181 GD~~  184 (234)
T 3ddh_A          181 GNSF  184 (234)
T ss_dssp             ESCC
T ss_pred             CCCc
Confidence            9996

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=94.11  E-value=0.044  Score=45.02  Aligned_cols=82  Identities=9%  Similarity=-0.002  Sum_probs=61.8

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vV  256 (297)
                      +...|++.++|+.+.+ .+.++|.|.+...++..+++.+.-.. +|...+..+......  + .+.+=+..+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i  166 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL  166 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-heeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeE
Confidence            4568999999999986 59999999999999999999886553 577666655433221  1 23344567799999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      .|+|++.
T Consensus       167 ~iGD~~n  173 (225)
T 3d6j_A          167 YIGDSTV  173 (225)
T ss_dssp             EEESSHH
T ss_pred             EEcCCHH
Confidence            9999973

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=94.05  E-value=0.071  Score=46.01  Aligned_cols=56  Identities=11%  Similarity=0.113  Sum_probs=36.9

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+.+..                       ...|...+.|+++.+ -..+++-|......+..+++.+...
T Consensus         4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A            4 KAISIDIDGTITYPNR-----------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CEEEEESTTTTBCTTS-----------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred             eEEEEECCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence            4799999999998521                       134556666666653 4666666666666666666666543

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=93.93  E-value=0.029  Score=47.61  Aligned_cols=79  Identities=10%  Similarity=0.046  Sum_probs=60.7

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+.+.+.++|.|.+...++..+++.+.-.   |+..+..+.+.....   .+.+=+..+|.++++++.
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            35689999999999988999999999999999999988653   665555443322111   244556677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       196 iGD~~  200 (254)
T 3umc_A          196 CAAHN  200 (254)
T ss_dssp             EESCH
T ss_pred             EcCch
Confidence            99996

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=93.93  E-value=0.029  Score=47.06  Aligned_cols=77  Identities=13%  Similarity=0.111  Sum_probs=56.9

Q ss_pred             eCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEEE
Q 022460          183 QRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVII  258 (297)
                      ..|++.++|+.+.+. +.++|.|++..  +..+++.+.-.+ +|+..+..+.+....   ..+.+=+..+|.+++++|.|
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v  169 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI  169 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence            589999999999976 99999999844  888898887654 677666655433221   23455667779999999999


Q ss_pred             ECCC
Q 022460          259 DNTP  262 (297)
Q Consensus       259 DDsp  262 (297)
                      .|++
T Consensus       170 GDs~  173 (233)
T 3nas_A          170 EDAE  173 (233)
T ss_dssp             ECSH
T ss_pred             eCCH
Confidence            9997

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=93.93  E-value=0.0063  Score=50.22  Aligned_cols=83  Identities=12%  Similarity=0.116  Sum_probs=59.9

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHh-hcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCc
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI-LDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~-LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~  254 (297)
                      ++...|++.++|+.+.+ .+.++|.|++...++..++.. +.-. .+|+..+..+.+...+.   .+.+=+..+|.+.++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  167 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            46789999999999984 699999999988887666554 3222 24666666554333222   244556677999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      ++.|+|++.
T Consensus       168 ~~~vgD~~~  176 (206)
T 2b0c_A          168 TVFFDDNAD  176 (206)
T ss_dssp             EEEEESCHH
T ss_pred             eEEeCCCHH
Confidence            999999985

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=93.90  E-value=0.099  Score=46.36  Aligned_cols=59  Identities=27%  Similarity=0.323  Sum_probs=39.4

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .+.+.+++||||||+.+..                       ..-|...+-|+++.+ -..++|-|.-...-+..+++.+
T Consensus        19 ~~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l   75 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDH-----------------------FLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNL   75 (285)
T ss_dssp             --CCEEEEECCCCCSCTTS-----------------------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHH
T ss_pred             CcceEEEEeCcCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc
Confidence            5667999999999998531                       134556666666654 4677777776666677777776


Q ss_pred             cCC
Q 022460          219 DPN  221 (297)
Q Consensus       219 DP~  221 (297)
                      ...
T Consensus        76 ~~~   78 (285)
T 3pgv_A           76 GIR   78 (285)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            554

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=93.82  E-value=0.13  Score=43.20  Aligned_cols=81  Identities=12%  Similarity=0.074  Sum_probs=57.3

Q ss_pred             EeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee---CC--ce--------eeeccc
Q 022460          182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---DG--EY--------LKDLTI  247 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~---~g--~~--------iKDLs~  247 (297)
                      ..+||+.++|+.+.+ .+.++|-|++...+++.+++.+.-. .+|..++...+..+.   .+  .+        .+-+..
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ-HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC-EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            459999999999986 4999999999999999999999765 356655442221111   00  00        122234


Q ss_pred             cC---CCCCcEEEEECCCc
Q 022460          248 LG---RDLARIAIVDNTPQ  263 (297)
Q Consensus       248 Lg---rdl~~vVIIDDsp~  263 (297)
                      +|   .++++++.|.|++.
T Consensus       171 ~~~~~~~~~~~~~vGDs~~  189 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVN  189 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGG
T ss_pred             cCCCcCchhheEEEeCCHh
Confidence            57   78899999999974

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=93.60  E-value=0.057  Score=45.57  Aligned_cols=100  Identities=13%  Similarity=0.015  Sum_probs=61.2

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHH--
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD--  216 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~--  216 (297)
                      ++-+.||+|+||||+.....-..          .+... ..+..|.+.  .|+.|.+ -+.+.|-|+.  ..+..+++  
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~~~----------~g~~~-~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l   71 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYVSG----------DQKEI-ISYDVKDAI--GISLLKKSGIEVRLISER--ACSKQTLSAL   71 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBCCS----------SCCCE-EEEEHHHHH--HHHHHHHTTCEEEEECSS--CCCHHHHHTT
T ss_pred             hcCcEEEEeCccceECCcEEEcC----------CCCEE-EEEecCcHH--HHHHHHHCCCEEEEEeCc--HHHHHHHHHh
Confidence            45679999999999875321100          11111 123455553  6888876 4999999988  78999999  


Q ss_pred             hhcCCCceeeeEEeccCeeeeCCc-eeeeccccCCCCCcEEEEECCCc
Q 022460          217 ILDPNQTLIGQRVYRDSCVFADGE-YLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       217 ~LDP~~~~f~~rL~Rd~C~~~~g~-~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      .+.-.  +     +. .+. .++. +.+=+..+|.++++++.|-|+..
T Consensus        72 ~lgi~--~-----~~-g~~-~K~~~l~~~~~~~gi~~~~~~~vGD~~n  110 (168)
T 3ewi_A           72 KLDCK--T-----EV-SVS-DKLATVDEWRKEMGLCWKEVAYLGNEVS  110 (168)
T ss_dssp             CCCCC--E-----EC-SCS-CHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             CCCcE--E-----EE-CCC-ChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence            44322  2     21 111 1122 22333456888999999999873

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=93.44  E-value=0.025  Score=48.49  Aligned_cols=79  Identities=16%  Similarity=0.158  Sum_probs=59.5

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEEC
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDD  260 (297)
                      +...|++.++|+.+...+.++|.|++...++..+++.+.-.. +|...+...  ......+.+=+..+|.+++++|.|.|
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~--kp~~~~~~~~~~~l~~~~~~~i~iGD  187 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFPRIEVVS--EKDPQTYARVLSEFDLPAERFVMIGN  187 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCCCEEEES--CCSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCceeeeeC--CCCHHHHHHHHHHhCcCchhEEEECC
Confidence            457899999999999779999999999999999998876543 566555421  11111234445667999999999999


Q ss_pred             CC
Q 022460          261 TP  262 (297)
Q Consensus       261 sp  262 (297)
                      ++
T Consensus       188 ~~  189 (251)
T 2pke_A          188 SL  189 (251)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=93.37  E-value=0.02  Score=48.25  Aligned_cols=79  Identities=11%  Similarity=0.056  Sum_probs=59.4

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+.+.+.++|.|.+...++..+++.+.-.   |+..+..+.+.....   .+.+=+..+|.+.++++.
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  191 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML  191 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            35689999999999877999999999999999999998543   554444433222111   244556677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       192 iGD~~  196 (254)
T 3umg_A          192 AAAHN  196 (254)
T ss_dssp             EESCH
T ss_pred             EeCCh
Confidence            99996

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=93.29  E-value=0.12  Score=45.02  Aligned_cols=50  Identities=12%  Similarity=0.124  Sum_probs=35.5

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHH
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLL  215 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il  215 (297)
                      .+.+++||||||+...                        ..-|+..+.|+++.+. ..+++.|..+.+-...+.
T Consensus         8 ~kli~~DlDGTLl~~~------------------------~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~   58 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSV------------------------TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILL   58 (268)
T ss_dssp             CSEEEEECBTTTEETT------------------------EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHH
T ss_pred             CCEEEEcCcCcEECCC------------------------EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHH
Confidence            4689999999999841                        0347889999999865 788888884433333333

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=93.26  E-value=0.043  Score=47.58  Aligned_cols=79  Identities=11%  Similarity=0.098  Sum_probs=61.5

Q ss_pred             EeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...||+.++|+.+.+ .+.++|.|++  ..+..+++.+.-.. +|+..+..+.....+   ..|.+=++++|.+++++|+
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~--~~~~~~l~~~gl~~-~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVS--LNAPTILAALELRE-FFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccccHHHHHHhhhcccccceecccc--cchhhhhhhhhhcc-ccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            368999999999975 5888888876  45788899987664 788777766544322   2467788889999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       172 VgDs~~  177 (243)
T 4g9b_A          172 IEDAQA  177 (243)
T ss_dssp             EESSHH
T ss_pred             EcCCHH
Confidence            999973

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=93.21  E-value=0.11  Score=45.07  Aligned_cols=15  Identities=27%  Similarity=0.483  Sum_probs=13.0

Q ss_pred             cEEEEeCCcceeeee
Q 022460          143 ITLVLDLDETLVHSS  157 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (297)
                      +.+++||||||+.+.
T Consensus         4 kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            4 KIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CEEEECTBTTTBCTT
T ss_pred             eEEEEeCCCCCcCCC
Confidence            589999999999863

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=93.15  E-value=0.036  Score=50.78  Aligned_cols=120  Identities=17%  Similarity=0.035  Sum_probs=64.9

Q ss_pred             CCCcEEEEeCCcceeeeecc----CCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccc----c
Q 022460          140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSI----Y  210 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~----Y  210 (297)
                      .+++.+|||+||||+..+.-    ......|.... +..-...-.....||+.+||+.+.+. +.|+|-|+....    -
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~-w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~  134 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKD-WTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSG  134 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHH-HHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHH-HHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHH
Confidence            45679999999999986520    00001111000 00000001356789999999999864 999999988664    4


Q ss_pred             HHHHHHhhcCCCceee-eEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcc
Q 022460          211 AGQLLDILDPNQTLIG-QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       211 A~~Il~~LDP~~~~f~-~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~  264 (297)
                      +..-|+.+.-.. +.. +.+.|...... ....+.|...|..  -++.|-|+..-
T Consensus       135 T~~~L~~lGi~~-~~~~~Lilr~~~~~K-~~~r~~l~~~Gy~--iv~~vGD~~~D  185 (262)
T 3ocu_A          135 TIDDMKRLGFNG-VEESAFYLKKDKSAK-AARFAEIEKQGYE--IVLYVGDNLDD  185 (262)
T ss_dssp             HHHHHHHHTCSC-CSGGGEEEESSCSCC-HHHHHHHHHTTEE--EEEEEESSGGG
T ss_pred             HHHHHHHcCcCc-ccccceeccCCCCCh-HHHHHHHHhcCCC--EEEEECCChHH
Confidence            444555553321 111 44556543221 1122333333443  38888888643

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=93.13  E-value=0.14  Score=41.33  Aligned_cols=76  Identities=9%  Similarity=-0.036  Sum_probs=56.4

Q ss_pred             eCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCCCCCcEEEE
Q 022460          183 QRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgrdl~~vVII  258 (297)
                      .+|++.++|+.+.+. +.++|.|++. .++..+++.+.-.. +|+..+..+.+....  + .+.+=+..+|.+  +++.|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~i  158 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVI  158 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-heeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEE
Confidence            789999999999875 9999999875 58888888886653 677777665543221  1 233444566777  99999


Q ss_pred             ECCC
Q 022460          259 DNTP  262 (297)
Q Consensus       259 DDsp  262 (297)
                      +|++
T Consensus       159 GD~~  162 (190)
T 2fi1_A          159 GDRP  162 (190)
T ss_dssp             ESSH
T ss_pred             cCCH
Confidence            9996

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=93.11  E-value=0.061  Score=44.29  Aligned_cols=78  Identities=9%  Similarity=0.095  Sum_probs=58.6

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ..+|++.++|+.+.+. +.++|.|++  ..+..+++.+.-. .+|+..+..+......+   .+.+=+..+|.++++++.
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  167 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLT-GYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCG-GGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChH-HHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            4679999999999865 999999998  6788888887654 35776666554433222   234455677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       168 iGD~~  172 (221)
T 2wf7_A          168 LEDSQ  172 (221)
T ss_dssp             EESSH
T ss_pred             EeCCH
Confidence            99997

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=93.09  E-value=0.12  Score=45.26  Aligned_cols=57  Identities=19%  Similarity=0.162  Sum_probs=35.5

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||+.+..                       ..-|...+.|+++.+ -..+++.|.-...-+..+++.+..
T Consensus         5 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   61 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN-----------------------ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDI   61 (279)
T ss_dssp             CCEEEECC----------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred             eEEEEEcCcCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence            46899999999998632                       145667778888764 478888887777778888888865


Q ss_pred             C
Q 022460          221 N  221 (297)
Q Consensus       221 ~  221 (297)
                      .
T Consensus        62 ~   62 (279)
T 3mpo_A           62 D   62 (279)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=92.98  E-value=0.13  Score=45.30  Aligned_cols=16  Identities=31%  Similarity=0.486  Sum_probs=13.7

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus         6 ~kli~fDlDGTLl~~~   21 (290)
T 3dnp_A            6 KQLLALNIDGALLRSN   21 (290)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ceEEEEcCCCCCCCCC
Confidence            4689999999999863

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=92.96  E-value=0.098  Score=45.96  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=61.1

Q ss_pred             EEeCccHHHHHHHHhcC--cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--C-ceeeeccccCC-----
Q 022460          181 VRQRPYLHMFLEAVASM--FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGR-----  250 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~--fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--g-~~iKDLs~Lgr-----  250 (297)
                      +...|++.++|+.+.+.  +.++|.|++...++..+++.+.-.  .|...+..+......  + .+.+-++.+|.     
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  190 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ  190 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSS
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcccc
Confidence            45789999999999975  899999999999999999998654  266555555432211  1 23445567788     


Q ss_pred             --CCCcEEEEECCC
Q 022460          251 --DLARIAIVDNTP  262 (297)
Q Consensus       251 --dl~~vVIIDDsp  262 (297)
                        ++++++.|.|++
T Consensus       191 ~~~~~~~i~~GDs~  204 (275)
T 2qlt_A          191 DPSKSKVVVFEDAP  204 (275)
T ss_dssp             CGGGSCEEEEESSH
T ss_pred             CCCcceEEEEeCCH
Confidence              999999999997

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=92.85  E-value=0.022  Score=48.64  Aligned_cols=78  Identities=14%  Similarity=0.100  Sum_probs=55.2

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEEC
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDD  260 (297)
                      +...||+.++|+.+.+...++|.|++...++..+++.+.-.. +|.....   +...+..+++-+.. |.+.++++.|+|
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~---~~~~K~~~~~~~~~-~~~~~~~~~vgD  169 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVL---IYIHKELMLDQVME-CYPARHYVMVDD  169 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEE---EESSGGGCHHHHHH-HSCCSEEEEECS
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEE---ecCChHHHHHHHHh-cCCCceEEEEcC
Confidence            457899999999999766899999999999999999875432 4433221   01111233333333 678899999999


Q ss_pred             CCc
Q 022460          261 TPQ  263 (297)
Q Consensus       261 sp~  263 (297)
                      ++.
T Consensus       170 s~~  172 (231)
T 2p11_A          170 KLR  172 (231)
T ss_dssp             CHH
T ss_pred             ccc
Confidence            985

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=92.85  E-value=0.12  Score=45.21  Aligned_cols=56  Identities=21%  Similarity=0.103  Sum_probs=41.5

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      .+.+++||||||+.+..                       ..-|...+.|+++.+ -..+++.|.-...-+..+++.+..
T Consensus         5 ~kli~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   61 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK-----------------------EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM   61 (279)
T ss_dssp             CCEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred             ceEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence            46899999999998531                       134667778888764 478888887777777788877753

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=92.83  E-value=0.047  Score=47.41  Aligned_cols=79  Identities=14%  Similarity=0.074  Sum_probs=60.3

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...|++.++|+.+.+. +.+++-|  ....+..+++.+.-.. +|+..+..+.....+.   .|.+-++++|.+++++|+
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~--~~~~~~~~L~~~gl~~-~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  192 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSS--ASKNAINVLNHLGISD-KFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG  192 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECC--SCTTHHHHHHHHTCGG-GCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccchhHHHHHHHHHhccccccccc--ccchhhhHhhhccccc-ccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE
Confidence            3579999999999865 5666543  4467888999987764 7888887776554332   466778888999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       193 VGDs~~  198 (250)
T 4gib_A          193 IEDASA  198 (250)
T ss_dssp             EESSHH
T ss_pred             ECCCHH
Confidence            999973

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=92.82  E-value=0.15  Score=45.34  Aligned_cols=58  Identities=21%  Similarity=0.176  Sum_probs=43.0

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +.+.+++||||||+.....                       .-|...+.|+++.+. ..++|-|.-....+..+++.+.
T Consensus         8 ~~~li~~DlDGTLl~~~~~-----------------------~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~   64 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLG   64 (275)
T ss_dssp             CCEEEEEECTTTTSCSSCC-----------------------SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTT
T ss_pred             CceEEEEeCCCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence            3578999999999974210                       124567888888754 8888989888888888888875


Q ss_pred             CC
Q 022460          220 PN  221 (297)
Q Consensus       220 P~  221 (297)
                      ..
T Consensus        65 ~~   66 (275)
T 1xvi_A           65 LQ   66 (275)
T ss_dssp             CT
T ss_pred             CC
Confidence            54

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=92.78  E-value=0.16  Score=45.17  Aligned_cols=55  Identities=20%  Similarity=0.171  Sum_probs=35.4

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      +.+++||||||+.+...                       ..|...+.|+++.+ -..+++.|......+..+++.+..
T Consensus         5 kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   60 (288)
T 1nrw_A            5 KLIAIDLDGTLLNSKHQ-----------------------VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGI   60 (288)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTC
T ss_pred             EEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            58999999999985210                       23555566666654 366666666666666666666543

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=92.64  E-value=0.092  Score=48.03  Aligned_cols=116  Identities=14%  Similarity=0.037  Sum_probs=63.7

Q ss_pred             CCcEEEEeCCcceeeeeccC----CCCCCceee---eeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccc---
Q 022460          141 LPITLVLDLDETLVHSSFDN----CKDADFSFP---IHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSI---  209 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~----~~~~d~~~~---i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~---  209 (297)
                      +++.+|||+||||+..+.--    .....|...   -.+..    -.....||+.+||+.+.+. +.|+|-|+....   
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r  132 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDA----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEK  132 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHT----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSH
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHc----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccH
Confidence            34599999999999875210    000111100   00001    1256789999999999864 999999988665   


Q ss_pred             -cHHHHHHhhcCCCceee-eEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcc
Q 022460          210 -YAGQLLDILDPNQTLIG-QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       210 -YA~~Il~~LDP~~~~f~-~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~  264 (297)
                       -+..-|+.+.-.. ++. +.+.|...... ....+.|...|.  .-++.|-|+..-
T Consensus       133 ~~T~~~L~~lGi~~-~~~~~Lilr~~~~~K-~~~r~~L~~~gy--~iv~~iGD~~~D  185 (260)
T 3pct_A          133 AGTVDDMKRLGFTG-VNDKTLLLKKDKSNK-SVRFKQVEDMGY--DIVLFVGDNLND  185 (260)
T ss_dssp             HHHHHHHHHHTCCC-CSTTTEEEESSCSSS-HHHHHHHHTTTC--EEEEEEESSGGG
T ss_pred             HHHHHHHHHcCcCc-cccceeEecCCCCCh-HHHHHHHHhcCC--CEEEEECCChHH
Confidence             4555555554322 121 34445432211 112233333343  348888888543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=92.58  E-value=0.12  Score=45.08  Aligned_cols=53  Identities=19%  Similarity=0.251  Sum_probs=37.3

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .+.+++||||||+.+..                       .. |+..++|+++.+ -..+++-|....+-...+...+
T Consensus         5 ~kli~~DlDGTLl~~~~-----------------------~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l   58 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGKS-----------------------RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML   58 (264)
T ss_dssp             CCEEEECCBTTTEETTE-----------------------EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEeCCCceEeCCE-----------------------EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            46899999999998521                       24 889999999975 4788888854444444444444

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=91.92  E-value=0.22  Score=43.13  Aligned_cols=42  Identities=26%  Similarity=0.264  Sum_probs=29.7

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG  206 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas  206 (297)
                      +.+++++||||||+.+.                        ..-|+..++++.+.+ -..+++-|..
T Consensus        16 ~~~~v~~DlDGTLl~~~------------------------~~~~~~~~~l~~l~~~G~~~~~aTn~   58 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDD------------------------SLLPGSLEFLETLKEKNKRFVFFTNN   58 (271)
T ss_dssp             GCCEEEECCBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEcCcCcEEeCC------------------------EECcCHHHHHHHHHHcCCeEEEEECC
Confidence            44689999999999851                        123677777777765 4677777743

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=91.91  E-value=0.042  Score=46.93  Aligned_cols=81  Identities=10%  Similarity=0.073  Sum_probs=58.5

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHh-hcCCCceeeeEEecc--CeeeeC---CceeeeccccCCCC-
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDI-LDPNQTLIGQRVYRD--SCVFAD---GEYLKDLTILGRDL-  252 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~-LDP~~~~f~~rL~Rd--~C~~~~---g~~iKDLs~Lgrdl-  252 (297)
                      +...|++.++|+.+.+. +.++|.|++...++...+.. +.-. .+|+..+..+  ......   ..+.+=+..+|.++ 
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  189 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA  189 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCC
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheeeEEecchhhccCCCCChHHHHHHHHHcCCCCC
Confidence            45899999999999976 99999999988777765532 2222 2566666665  333222   13456667789888 


Q ss_pred             -CcEEEEECCC
Q 022460          253 -ARIAIVDNTP  262 (297)
Q Consensus       253 -~~vVIIDDsp  262 (297)
                       +++|.|+|++
T Consensus       190 ~~~~i~iGD~~  200 (250)
T 3l5k_A          190 MEKCLVFEDAP  200 (250)
T ss_dssp             GGGEEEEESSH
T ss_pred             cceEEEEeCCH
Confidence             9999999997

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=91.88  E-value=0.12  Score=44.96  Aligned_cols=43  Identities=16%  Similarity=0.172  Sum_probs=30.4

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS  208 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~  208 (297)
                      .+.+++||||||+.+..                        .-|+..++|+++.+. ..+++.|..+.
T Consensus         6 ~kli~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~Gi~v~laTgrs~   49 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGTE------------------------KIEEACEFVRTLKDRGVPYLFVTNNSS   49 (266)
T ss_dssp             CSEEEEECSSSTTCHHH------------------------HHHHHHHHHHHHHHTTCCEEEEESCCS
T ss_pred             CCEEEEeCcCceEeCCE------------------------eCccHHHHHHHHHHCCCeEEEEeCCCC
Confidence            46899999999997521                        236677788887754 67777776333

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=91.85  E-value=0.15  Score=41.61  Aligned_cols=81  Identities=14%  Similarity=0.141  Sum_probs=58.3

Q ss_pred             eCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC-CceeeeEEec--cCe----ee---eCCceeeeccc-cCC
Q 022460          183 QRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYR--DSC----VF---ADGEYLKDLTI-LGR  250 (297)
Q Consensus       183 ~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~-~~~f~~rL~R--d~C----~~---~~g~~iKDLs~-Lgr  250 (297)
                      .+|++.++|+.+.+. +.++|.|++...++..+++.+.-. ..+|...+..  +.+    ..   ..+..++-|.. +|.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  162 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKGL  162 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGGG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhCC
Confidence            789999999999875 999999999999999999998653 2356544332  221    10   11234444543 388


Q ss_pred             CCCcEEEEECCCc
Q 022460          251 DLARIAIVDNTPQ  263 (297)
Q Consensus       251 dl~~vVIIDDsp~  263 (297)
                      +.++++.|.|++.
T Consensus       163 ~~~~~~~vGD~~~  175 (219)
T 3kd3_A          163 IDGEVIAIGDGYT  175 (219)
T ss_dssp             CCSEEEEEESSHH
T ss_pred             CCCCEEEEECCHh
Confidence            8999999999973

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=91.80  E-value=0.21  Score=44.38  Aligned_cols=56  Identities=20%  Similarity=0.210  Sum_probs=42.4

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+....                       ..-|...+.|+++.+. ..++|-|.-....+..+++.+...
T Consensus         6 kli~~DlDGTLl~~~~-----------------------~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~   62 (282)
T 1rkq_A            6 KLIAIDMDGTLLLPDH-----------------------TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME   62 (282)
T ss_dssp             CEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred             eEEEEeCCCCCCCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            5899999999997421                       1346677888888754 788888888777788888887654

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=91.80  E-value=0.17  Score=44.90  Aligned_cols=17  Identities=35%  Similarity=0.538  Sum_probs=14.5

Q ss_pred             CCCcEEEEeCCcceeee
Q 022460          140 GLPITLVLDLDETLVHS  156 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs  156 (297)
                      .+.+.+++||||||+.+
T Consensus        19 ~~~kli~~DlDGTLl~~   35 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKD   35 (283)
T ss_dssp             CCCCEEEECCBTTTBST
T ss_pred             cCceEEEEeCcCCCCCC
Confidence            45679999999999975

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=91.73  E-value=0.27  Score=43.24  Aligned_cols=56  Identities=16%  Similarity=0.110  Sum_probs=35.8

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+.+...                       .-|...+.|++..+-..++|-|.-....+..+++.+...
T Consensus         3 kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~Gi~v~iaTGR~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNLE-----------------------ISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKR   58 (268)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             cEEEEeCCCcCCCCCCc-----------------------cCHHHHHHHHHHhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence            47899999999985210                       234455666662234677777776666666777666554

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=91.72  E-value=0.22  Score=47.05  Aligned_cols=55  Identities=15%  Similarity=0.178  Sum_probs=42.3

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc----cccHHHH
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ----SIYAGQL  214 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~----~~YA~~I  214 (297)
                      ++++.+++|+||||++..                        ..=|++.++|+.+.+ -..+++.|.+.    +.+|+++
T Consensus        11 ~~~~~~l~D~DGvl~~g~------------------------~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l   66 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRGK------------------------KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFI   66 (352)
T ss_dssp             -CCEEEEECCBTTTEETT------------------------EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHH
T ss_pred             ccCCEEEEECCCeeEcCC------------------------eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHH
Confidence            467899999999999841                        123999999999986 48999999875    5677776


Q ss_pred             HHhh
Q 022460          215 LDIL  218 (297)
Q Consensus       215 l~~L  218 (297)
                      -+.+
T Consensus        67 ~~~l   70 (352)
T 3kc2_A           67 SSKL   70 (352)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            6544

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=91.64  E-value=0.073  Score=44.32  Aligned_cols=76  Identities=18%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +...|++.++|+.+.+.+.++|.|++...     ++.+.-. .+|+..+..+.+.....   .+.+=+..+|.++++++.
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            45789999999999988999999998765     4444333 36777776654433221   345556677999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       178 vGD~~  182 (230)
T 3vay_A          178 VGDHP  182 (230)
T ss_dssp             EESCT
T ss_pred             EeCCh
Confidence            99997

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=91.44  E-value=0.15  Score=44.05  Aligned_cols=16  Identities=38%  Similarity=0.420  Sum_probs=13.6

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            3689999999999864

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=91.40  E-value=0.086  Score=49.21  Aligned_cols=80  Identities=13%  Similarity=0.010  Sum_probs=60.0

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCC------ccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCC
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAG------QSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGR  250 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas------~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgr  250 (297)
                      +...|++.++|+.+.+. +.++|.|++      ........+..|+.   +|+..+..+.....+   ..|.+=+.++|.
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~  175 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HFDFLIESCQVGMVKPEPQIYKFLLDTLKA  175 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh---heeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence            46789999999999976 999999998      44444444444543   588877766544333   246777888899


Q ss_pred             CCCcEEEEECCCc
Q 022460          251 DLARIAIVDNTPQ  263 (297)
Q Consensus       251 dl~~vVIIDDsp~  263 (297)
                      +++++++|+|++.
T Consensus       176 ~p~~~~~v~D~~~  188 (555)
T 3i28_A          176 SPSEVVFLDDIGA  188 (555)
T ss_dssp             CGGGEEEEESCHH
T ss_pred             ChhHEEEECCcHH
Confidence            9999999999974

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=91.26  E-value=0.39  Score=40.89  Aligned_cols=18  Identities=6%  Similarity=-0.023  Sum_probs=14.9

Q ss_pred             ccccCCCCCcEEEEECCC
Q 022460          245 LTILGRDLARIAIVDNTP  262 (297)
Q Consensus       245 Ls~Lgrdl~~vVIIDDsp  262 (297)
                      ++.+|.++++++.|.|++
T Consensus       189 ~~~lgi~~~~~~~iGD~~  206 (259)
T 2ho4_A          189 LRDADCAPEEAVMIGDDC  206 (259)
T ss_dssp             GGGGTCCGGGEEEEESCT
T ss_pred             HHHcCCChHHEEEECCCc
Confidence            456688889999999997

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=91.12  E-value=0.23  Score=43.43  Aligned_cols=52  Identities=13%  Similarity=0.226  Sum_probs=37.7

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      +.+++||||||++...                       .. |+..++|+++.+ ...+++.|.....-...+.+.|
T Consensus         2 k~i~~D~DGtL~~~~~-----------------------~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l   54 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGNR-----------------------AI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL   54 (263)
T ss_dssp             EEEEEECBTTTEETTE-----------------------EC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred             eEEEEeCcCceEeCCE-----------------------eC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            4789999999997310                       12 788899988875 5788888877665555555554

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=91.06  E-value=0.083  Score=47.23  Aligned_cols=111  Identities=13%  Similarity=0.038  Sum_probs=65.4

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHH---HHHHh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAG---QLLDI  217 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~---~Il~~  217 (297)
                      ...+++|+|||+.......  ..++.      +-   ......||+.++|+.+.+. +.++|-|+....++.   .+++.
T Consensus       159 ~~~i~iD~dgtl~~~~~~~--~~~~~------~~---~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~  227 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRG--PYDLE------KC---DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM  227 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCC--TTCGG------GG---GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred             cceEEEeCCCCcccccCCC--chhhh------hc---cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHh
Confidence            3578899999986543211  11221      10   0134689999999999864 999999999988774   44555


Q ss_pred             hcC-----CCceeeeEEeccCeeeeC--CceeeeccccCCCCCc-EEEEECCCc
Q 022460          218 LDP-----NQTLIGQRVYRDSCVFAD--GEYLKDLTILGRDLAR-IAIVDNTPQ  263 (297)
Q Consensus       218 LDP-----~~~~f~~rL~Rd~C~~~~--g~~iKDLs~Lgrdl~~-vVIIDDsp~  263 (297)
                      +.+     .|-.|...+.++......  ..+.+-+..++.+..+ +++|+|++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~  281 (301)
T 1ltq_A          228 TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQ  281 (301)
T ss_dssp             HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHH
T ss_pred             cccccccccCCCchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHH
Confidence            111     332366555555421100  0122233445555444 588999974

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=91.00  E-value=0.21  Score=43.97  Aligned_cols=52  Identities=17%  Similarity=0.243  Sum_probs=34.1

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHH
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLL  215 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il  215 (297)
                      +.+.+++||||||+....                       ..-|...+.|+++.+...++|-|.-....+.+.+
T Consensus        12 ~~kli~~DlDGTLl~~~~-----------------------~is~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l   63 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQ-----------------------KIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQL   63 (262)
T ss_dssp             -CEEEEEESBTTTBSTTS-----------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHH
T ss_pred             CeEEEEEeCccCCCCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEEcCCCHHHHHHHH
Confidence            467999999999997421                       1356788888888766666666654333333333

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=90.93  E-value=0.33  Score=40.36  Aligned_cols=15  Identities=27%  Similarity=0.583  Sum_probs=13.1

Q ss_pred             cEEEEeCCcceeeee
Q 022460          143 ITLVLDLDETLVHSS  157 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (297)
                      +.+++||||||+++.
T Consensus         4 k~i~fDlDGTLl~~~   18 (250)
T 2c4n_A            4 KNVICDIDGVLMHDN   18 (250)
T ss_dssp             CEEEEECBTTTEETT
T ss_pred             cEEEEcCcceEEeCC
Confidence            589999999999863

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=90.57  E-value=0.32  Score=42.48  Aligned_cols=54  Identities=15%  Similarity=0.273  Sum_probs=38.6

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+ ....                       . |-..+.|+++.+ -..++|-|......+..+++.+...
T Consensus         3 kli~~DlDGTLl-~~~~-----------------------~-~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A            3 RLIFLDIDKTLI-PGYE-----------------------P-DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             EEEEECCSTTTC-TTSC-----------------------S-GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCcc-CCCC-----------------------c-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            578999999999 3110                       1 225677777764 5788888877777788888888654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=90.47  E-value=0.35  Score=42.58  Aligned_cols=41  Identities=15%  Similarity=0.015  Sum_probs=32.1

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcC
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTA  205 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTa  205 (297)
                      ..+.+++||||||+...                        ..-|+..++|+.+.+ ...+++.|.
T Consensus        13 ~~k~i~~D~DGtL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn   54 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYN------------------------GLLPGIENTFDYLKAQGQDYYIVTN   54 (284)
T ss_dssp             GCSEEEECSBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCEEEEcCcCCcCcCC------------------------eeChhHHHHHHHHHHCCCEEEEEeC
Confidence            34689999999999831                        123889999999875 589999996

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=90.38  E-value=0.067  Score=44.40  Aligned_cols=80  Identities=11%  Similarity=0.112  Sum_probs=59.5

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCcee-eeEEeccCeeee----CC-ceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFA----DG-EYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f-~~rL~Rd~C~~~----~g-~~iKDLs~Lgrdl~~  254 (297)
                      +...|++.++|+.+..  .++|.|++...++..+++.+.-. .+| ...+..+.....    ++ .+.+=++.+|.++++
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~  162 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLK-PYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  162 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCG-GGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChH-HhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence            4578999999999876  89999999999999999998654 357 666655442211    11 233445677999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      ++.|+|++.
T Consensus       163 ~i~iGD~~~  171 (229)
T 2fdr_A          163 VVVVEDSVH  171 (229)
T ss_dssp             EEEEESSHH
T ss_pred             eEEEcCCHH
Confidence            999999973

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=89.94  E-value=0.18  Score=44.10  Aligned_cols=53  Identities=23%  Similarity=0.189  Sum_probs=34.2

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhc
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      ..+++||||||+....                        .-|...+.|+++.+...++|-|.-....+.++++.+.
T Consensus         4 ~li~~DlDGTLl~~~~------------------------~~~~~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~   56 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQ------------------------ALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVG   56 (244)
T ss_dssp             EEEEECTBTTTBSCHH------------------------HHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHT
T ss_pred             eEEEEeCCCCCcCCHH------------------------HHHHHHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcC
Confidence            4899999999998421                        0134455565555556666777666666666766643

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=89.80  E-value=0.16  Score=46.34  Aligned_cols=82  Identities=12%  Similarity=0.136  Sum_probs=61.5

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee------------CC-ceeeecc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA------------DG-EYLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~------------~g-~~iKDLs  246 (297)
                      +..+|++.++|+.+.+. +.++|.|.+...+++.+++.+.-.. +|...+...+....            ++ .+.+=+.
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~  255 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ  255 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence            45799999999999975 9999999999999999999998764 67766543222210            11 1333445


Q ss_pred             ccCCCCCcEEEEECCCc
Q 022460          247 ILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp~  263 (297)
                      .+|.++++++.|.|++.
T Consensus       256 ~lgi~~~~~v~vGDs~n  272 (335)
T 3n28_A          256 QYDVEIHNTVAVGDGAN  272 (335)
T ss_dssp             HHTCCGGGEEEEECSGG
T ss_pred             HcCCChhhEEEEeCCHH
Confidence            66899999999999973

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=89.78  E-value=0.55  Score=39.77  Aligned_cols=16  Identities=25%  Similarity=0.322  Sum_probs=13.7

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus        12 ~k~i~fDlDGTLl~s~   27 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSG   27 (271)
T ss_dssp             CCEEEECCBTTTEECC
T ss_pred             CCEEEEeCCCeEEecC
Confidence            3589999999999964

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=89.76  E-value=0.34  Score=41.95  Aligned_cols=53  Identities=15%  Similarity=0.277  Sum_probs=34.3

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +++.+++||||||+....                       ..-|...+.|+++.+...++|-|.-.  +. .+.+.|.
T Consensus         5 ~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~i~v~iaTGR~--~~-~~~~~l~   57 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPRQ-----------------------KITKEMDDFLQKLRQKIKIGVVGGSD--FE-KVQEQLG   57 (246)
T ss_dssp             CSEEEEEESBTTTBCTTS-----------------------CCCHHHHHHHHHHTTTSEEEEECSSC--HH-HHHHHHC
T ss_pred             CceEEEEECCCCcCCCCc-----------------------ccCHHHHHHHHHHHhCCeEEEEcCCC--HH-HHHHHhc
Confidence            567999999999997421                       13466788888887665555555543  32 3555554

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=89.51  E-value=0.48  Score=42.36  Aligned_cols=41  Identities=20%  Similarity=0.209  Sum_probs=31.8

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG  206 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas  206 (297)
                      .+.+++||||||+...                        ..-|+..++|+.+.+ -..+++.|..
T Consensus        21 ~k~i~~D~DGTL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~   62 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNGE------------------------RAVPGAPELLERLARAGKAALFVSNN   62 (306)
T ss_dssp             CSEEEECSBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEECCCCcEecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEECC
Confidence            4589999999999731                        134788999999875 5888889953

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=89.30  E-value=0.04  Score=46.29  Aligned_cols=39  Identities=18%  Similarity=0.097  Sum_probs=33.4

Q ss_pred             EEeCccHHHHHHHHhc--CcEEEEEcCCccccHHHHHHhhc
Q 022460          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~--~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +...||+.++|+.+.+  .+.++|.|++.+.++..+++.+.
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~  114 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYA  114 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhc
Confidence            4678999999999987  59999999999988887776653

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=88.91  E-value=0.52  Score=40.66  Aligned_cols=49  Identities=16%  Similarity=0.161  Sum_probs=31.4

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHH
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQL  214 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~I  214 (297)
                      .+.+++||||||+.+..                       .. |++.++|+.+.+ ...+++.|.....-...+
T Consensus         5 ~k~v~fDlDGTL~~~~~-----------------------~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~   54 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGKE-----------------------PI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETV   54 (264)
T ss_dssp             CCEEEECCBTTTEETTE-----------------------EC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHH
T ss_pred             CCEEEEeCCCeEEeCCE-----------------------EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence            45899999999998521                       12 567777777754 466677766544333333

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=88.21  E-value=0.25  Score=43.46  Aligned_cols=15  Identities=27%  Similarity=0.454  Sum_probs=13.0

Q ss_pred             CcEEEEeCCcceeee
Q 022460          142 PITLVLDLDETLVHS  156 (297)
Q Consensus       142 k~tLVLDLDeTLVhs  156 (297)
                      .+.+++||||||+.+
T Consensus         3 ~kli~~DlDGTLl~~   17 (271)
T 1rlm_A            3 VKVIVTDMDGTFLND   17 (271)
T ss_dssp             CCEEEECCCCCCSCT
T ss_pred             ccEEEEeCCCCCCCC
Confidence            358999999999985

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=88.19  E-value=0.46  Score=42.93  Aligned_cols=55  Identities=16%  Similarity=0.103  Sum_probs=39.5

Q ss_pred             CcEEEEeCCcceeee-eccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHH--Hh
Q 022460          142 PITLVLDLDETLVHS-SFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLL--DI  217 (297)
Q Consensus       142 k~tLVLDLDeTLVhs-~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il--~~  217 (297)
                      .+.+++||||||+.. ..                       ..-|...+.|+++.+ -..++|-|.-....+..++  +.
T Consensus        27 ikli~~DlDGTLl~~~~~-----------------------~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~   83 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKDI-----------------------KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN   83 (301)
T ss_dssp             CCEEEEETBTTTBCCTTT-----------------------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH
T ss_pred             ccEEEEECCCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHh
Confidence            358999999999985 21                       023567777877765 4788888877777777777  66


Q ss_pred             hc
Q 022460          218 LD  219 (297)
Q Consensus       218 LD  219 (297)
                      +.
T Consensus        84 l~   85 (301)
T 2b30_A           84 LK   85 (301)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=88.17  E-value=0.099  Score=46.65  Aligned_cols=80  Identities=13%  Similarity=0.149  Sum_probs=56.4

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCC----------CceeeeEEeccC-e-eeeCCceeeecccc
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN----------QTLIGQRVYRDS-C-VFADGEYLKDLTIL  248 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~----------~~~f~~rL~Rd~-C-~~~~g~~iKDLs~L  248 (297)
                      +...||+.++|++   .+.+.|.|++.+..+..+++.+...          ..+|...+.... . +.....|.+=++++
T Consensus       124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~l  200 (253)
T 2g80_A          124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDI  200 (253)
T ss_dssp             BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHc
Confidence            4568999999999   7999999999999999999876211          123443332111 0 11112466777888


Q ss_pred             CCCCCcEEEEECCCc
Q 022460          249 GRDLARIAIVDNTPQ  263 (297)
Q Consensus       249 grdl~~vVIIDDsp~  263 (297)
                      |.+++++|+|+|++.
T Consensus       201 g~~p~~~l~vgDs~~  215 (253)
T 2g80_A          201 GAKASEVLFLSDNPL  215 (253)
T ss_dssp             TCCGGGEEEEESCHH
T ss_pred             CCCcccEEEEcCCHH
Confidence            999999999999973

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=88.07  E-value=0.47  Score=41.81  Aligned_cols=52  Identities=17%  Similarity=0.245  Sum_probs=36.1

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      .+.+++||||||+.+..                       ..-|...+.|+++.+. ..++|-|.....   .+.+.|.
T Consensus         4 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~---~~~~~l~   56 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRL-----------------------CQTDEMRALIKRARGAGFCVGTVGGSDFA---KQVEQLG   56 (246)
T ss_dssp             SEEEEECSBTTTBSTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHC
T ss_pred             ceEEEEeCcCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHH---HHHHHhh
Confidence            56899999999998521                       1356788888888865 677777766544   3444444

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=87.82  E-value=0.096  Score=46.55  Aligned_cols=75  Identities=12%  Similarity=0.206  Sum_probs=57.8

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEE
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVII  258 (297)
                      ....||++.++|+++.+. +.++|.|...+..+..+++.+.-.. +|...+        ...+.+-++.++.+.++++.|
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~~~--------p~~k~~~~~~l~~~~~~~~~V  204 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSNLS--------PEDKVRIIEKLKQNGNKVLMI  204 (263)
Confidence            346899999999999875 9999999999999999999986543 454333        122345556677778899999


Q ss_pred             ECCCc
Q 022460          259 DNTPQ  263 (297)
Q Consensus       259 DDsp~  263 (297)
                      .|+..
T Consensus       205 GD~~~  209 (263)
T 2yj3_A          205 GDGVN  209 (263)
Confidence            99863

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=88.00  E-value=0.21  Score=42.85  Aligned_cols=81  Identities=10%  Similarity=-0.077  Sum_probs=57.9

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCcee-eeEEeccCeeee--CC-ceeeeccccCCCC-Cc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFA--DG-EYLKDLTILGRDL-AR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f-~~rL~Rd~C~~~--~g-~~iKDLs~Lgrdl-~~  254 (297)
                      ....|++.++|+.+.+. +.++|.|.+...++..+++.+...+ +| +..+..+.+...  ++ .+.+=+..+|.+. ++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  180 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  180 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence            35689999999999865 8999999999999999998875443 33 444444432211  11 2334455679888 99


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      ++.|.|++
T Consensus       181 ~i~iGD~~  188 (267)
T 1swv_A          181 MIKVGDTV  188 (267)
T ss_dssp             EEEEESSH
T ss_pred             EEEEeCCH
Confidence            99999997

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=87.78  E-value=0.72  Score=37.69  Aligned_cols=27  Identities=19%  Similarity=0.284  Sum_probs=23.9

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCc
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQ  207 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~  207 (297)
                      +...||+.++|+++.+.+.+.|-|++.
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~   94 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAM   94 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC-
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCC
Confidence            467899999999999889999999983

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=87.46  E-value=0.22  Score=43.37  Aligned_cols=54  Identities=26%  Similarity=0.155  Sum_probs=34.7

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhc
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +.+++||||||+.+...                      ..-|...+.|+++.+ -..+++-|... ..+..+++.+.
T Consensus         3 kli~~DlDGTLl~~~~~----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~   57 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETH----------------------RIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ   57 (261)
T ss_dssp             CEEEECSBTTTBCTTTS----------------------SCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred             cEEEEeCCCCCcCCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence            47999999999985321                      124556666777664 36777777665 55555555554

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=87.44  E-value=0.32  Score=43.47  Aligned_cols=16  Identities=25%  Similarity=0.395  Sum_probs=13.8

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus        37 iKli~fDlDGTLld~~   52 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSK   52 (304)
T ss_dssp             CSEEEECCCCCCSCTT
T ss_pred             eEEEEEeCCCCCCCCC
Confidence            5789999999999863

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=86.82  E-value=0.46  Score=41.14  Aligned_cols=15  Identities=40%  Similarity=0.463  Sum_probs=13.1

Q ss_pred             CcEEEEeCCcceeee
Q 022460          142 PITLVLDLDETLVHS  156 (297)
Q Consensus       142 k~tLVLDLDeTLVhs  156 (297)
                      .+.+++||||||+..
T Consensus        12 iKli~~DlDGTLl~~   26 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCEEEECSBTTTBCT
T ss_pred             eEEEEEeCCCCCcCC
Confidence            578999999999973

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=86.07  E-value=0.29  Score=39.77  Aligned_cols=81  Identities=15%  Similarity=0.145  Sum_probs=55.6

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC-----------ee-eeCC-ceeeeccc
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-----------CV-FADG-EYLKDLTI  247 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~-----------C~-~~~g-~~iKDLs~  247 (297)
                      ...|++.++|+.+.+. +.++|+|++...++..+++.+.... +|...+....           +. ..++ .+.+=+..
T Consensus        76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  154 (211)
T 1l7m_A           76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  154 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence            4679999999999875 8999999998889999998887653 4544332211           10 0001 12222345


Q ss_pred             cCCCCCcEEEEECCCc
Q 022460          248 LGRDLARIAIVDNTPQ  263 (297)
Q Consensus       248 Lgrdl~~vVIIDDsp~  263 (297)
                      +|.++++++.|-|++.
T Consensus       155 lgi~~~~~~~iGD~~~  170 (211)
T 1l7m_A          155 EGINLEDTVAVGDGAN  170 (211)
T ss_dssp             HTCCGGGEEEEECSGG
T ss_pred             cCCCHHHEEEEecChh
Confidence            5888999999999973

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=85.12  E-value=0.31  Score=40.68  Aligned_cols=20  Identities=35%  Similarity=0.423  Sum_probs=15.6

Q ss_pred             CCCCCcEEEEeCCcceeeee
Q 022460          138 IAGLPITLVLDLDETLVHSS  157 (297)
Q Consensus       138 ~~~~k~tLVLDLDeTLVhs~  157 (297)
                      ...+-+.+++||||||+.+.
T Consensus        15 ~~~~ik~i~fDlDGTL~d~~   34 (237)
T 4ex6_A           15 PAAADRGVILDLDGTLADTP   34 (237)
T ss_dssp             --CCCEEEEECSBTTTBCCH
T ss_pred             CcccCCEEEEcCCCCCcCCH
Confidence            34677899999999999864

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=85.10  E-value=0.53  Score=37.86  Aligned_cols=79  Identities=13%  Similarity=0.120  Sum_probs=53.1

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeee-C---CceeeeccccCCCCCcE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA-D---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~-~---g~~iKDLs~Lgrdl~~v  255 (297)
                      +..+|++.++|+.+.+. +.++|.|++...++..+ +.+.-.. ++....+.+..... .   .....-+..+  +.+++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~  153 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFI  153 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-heeeEEeeCCceECCcCCccCHHHHHHhc--CcCcE
Confidence            36899999999999976 99999999999999888 7776543 33333333221110 0   1111223334  78899


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      +.|.|++.
T Consensus       154 i~iGD~~~  161 (201)
T 4ap9_A          154 LAMGDGYA  161 (201)
T ss_dssp             EEEECTTC
T ss_pred             EEEeCCHH
Confidence            99999974

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=83.25  E-value=0.63  Score=40.43  Aligned_cols=58  Identities=22%  Similarity=0.217  Sum_probs=37.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhh
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      +.+++||||||+.....+             ..     -..-|...+.|+++.+.-.++|-|.-....+..+++.+
T Consensus         2 kli~~DlDGTLl~~~~~~-------------~~-----~~i~~~~~~al~~l~~~g~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMNP-------------EE-----SYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CEEEEECBTTTBCCCSCG-------------GG-----CCCCHHHHHHHHHHHHHSEEEEECSSCHHHHHHHSCSS
T ss_pred             eEEEEecCCCCcCCCCCc-------------cc-----CCCCHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHhccc
Confidence            478999999999742100             00     01457788888888754466677766655566665544

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=83.01  E-value=1.5  Score=38.41  Aligned_cols=16  Identities=25%  Similarity=0.270  Sum_probs=14.0

Q ss_pred             CCcEEEEeCCcceeee
Q 022460          141 LPITLVLDLDETLVHS  156 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs  156 (297)
                      ..+.+++||||||+.+
T Consensus        21 ~~kliifDlDGTLlds   36 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPH   36 (289)
T ss_dssp             CSEEEEEETBTTTBCS
T ss_pred             CCeEEEEECCCCCcCC
Confidence            4578999999999985

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=82.64  E-value=0.51  Score=39.71  Aligned_cols=18  Identities=22%  Similarity=0.095  Sum_probs=14.7

Q ss_pred             CCCcEEEEeCCcceeeee
Q 022460          140 GLPITLVLDLDETLVHSS  157 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~  157 (297)
                      ...+.++|||||||+.+.
T Consensus        20 m~ik~i~fDlDGTL~d~~   37 (254)
T 3umc_A           20 QGMRAILFDVFGTLVDWR   37 (254)
T ss_dssp             SSCCEEEECCBTTTEEHH
T ss_pred             cCCcEEEEeCCCccEecC
Confidence            345789999999999753

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=82.51  E-value=0.43  Score=39.85  Aligned_cols=17  Identities=18%  Similarity=0.382  Sum_probs=14.8

Q ss_pred             CCcEEEEeCCcceeeee
Q 022460          141 LPITLVLDLDETLVHSS  157 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~  157 (297)
                      +++.+++||||||+.+.
T Consensus         3 ~~k~viFDlDGTL~Ds~   19 (197)
T 1q92_A            3 RALRVLVDMDGVLADFE   19 (197)
T ss_dssp             CCEEEEECSBTTTBCHH
T ss_pred             CceEEEEeCCCCCccCc
Confidence            45789999999999875

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=81.77  E-value=0.68  Score=37.53  Aligned_cols=16  Identities=31%  Similarity=0.551  Sum_probs=13.1

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus         5 ~k~i~fDlDGTL~d~~   20 (211)
T 1l7m_A            5 KKLILFDFDSTLVNNE   20 (211)
T ss_dssp             CEEEEEECCCCCBSSC
T ss_pred             CcEEEEeCCCCCCCcc
Confidence            4678999999999873

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=80.77  E-value=0.62  Score=37.98  Aligned_cols=16  Identities=38%  Similarity=0.422  Sum_probs=13.7

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus         6 ~k~v~fDlDGTL~d~~   21 (225)
T 3d6j_A            6 YTVYLFDFDYTLADSS   21 (225)
T ss_dssp             CSEEEECCBTTTEECH
T ss_pred             CCEEEEeCCCCCCCCH
Confidence            4689999999999864

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=80.57  E-value=0.7  Score=39.49  Aligned_cols=18  Identities=39%  Similarity=0.287  Sum_probs=14.9

Q ss_pred             CCCcEEEEeCCcceeeee
Q 022460          140 GLPITLVLDLDETLVHSS  157 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~  157 (297)
                      ...+.+++||||||+.+.
T Consensus        21 ~~~k~iiFDlDGTL~d~~   38 (243)
T 2hsz_A           21 TQFKLIGFDLDGTLVNSL   38 (243)
T ss_dssp             SSCSEEEECSBTTTEECH
T ss_pred             ccCCEEEEcCCCcCCCCH
Confidence            445689999999999874

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=80.18  E-value=0.75  Score=37.40  Aligned_cols=16  Identities=19%  Similarity=0.432  Sum_probs=14.1

Q ss_pred             CcEEEEeCCcceeeee
Q 022460          142 PITLVLDLDETLVHSS  157 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (297)
                      .+.+++||||||+.+.
T Consensus         7 ~k~viFDlDGTL~d~~   22 (206)
T 2b0c_A            7 KMLYIFDLGNVIVDID   22 (206)
T ss_dssp             CCEEEECCBTTTEEEE
T ss_pred             ccEEEEcCCCeeecCc
Confidence            4689999999999876

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=80.11  E-value=0.55  Score=38.40  Aligned_cols=16  Identities=25%  Similarity=0.378  Sum_probs=13.9

Q ss_pred             cEEEEeCCcceeeeec
Q 022460          143 ITLVLDLDETLVHSSF  158 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~  158 (297)
                      +.+++||||||+.+..
T Consensus         5 ~~viFD~DGtL~Ds~~   20 (180)
T 3bwv_A            5 QRIAIDMDEVLADTLG   20 (180)
T ss_dssp             CEEEEETBTTTBCHHH
T ss_pred             cEEEEeCCCcccccHH
Confidence            5899999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	297
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	1e-33

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 1e-33
 Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 12/147 (8%)

Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
           LP+       +           I +V+DLDETLVHSSF    +ADF  P+     V  V+
Sbjct: 5   LPEAKAQDSDK-----------ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVY 53

Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
           V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD        R++R+SCVF  G 
Sbjct: 54  VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGN 112

Query: 241 YLKDLTILGRDLARIAIVDNTPQVYLF 267
           Y+KDL+ LGRDL R+ I+DN+P  Y+F
Sbjct: 113 YVKDLSRLGRDLRRVLILDNSPASYVF 139

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	297
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.64
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.19
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	97.93
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	97.7
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.61
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.54
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.38
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.03
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	96.88
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	96.82
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	96.78
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	96.55
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	96.45
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	96.33
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	96.03
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	96.0
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	95.98
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	95.23
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	94.7
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	94.66
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	94.42
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	94.3
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	94.26
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	94.18
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	93.91
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	93.9
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	93.84
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	93.6
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	93.53
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	93.49
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	93.46
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	93.32
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	93.31
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	92.86
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	92.78
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	92.25
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	92.0
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	91.94
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	91.61
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	90.9
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	90.83
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	90.72
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	89.74
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	88.43
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	88.08
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	84.61
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	81.49
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	80.93
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	80.81
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	80.8
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	80.19

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-44  Score=309.90  Aligned_cols=163  Identities=37%  Similarity=0.599  Sum_probs=151.6

Q ss_pred             CCCC-CCCCCCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCcccc
Q 022460          132 TPLR-EPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIY  210 (297)
Q Consensus       132 llP~-~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~Y  210 (297)
                      |+|+ .+...+|+|||||||||||||+..+...+++.+.+.+.+....+||++|||+++||++|+++|||+|||||++.|
T Consensus         4 llp~~~~~~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~Y   83 (181)
T d1ta0a_           4 LLPEAKAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKY   83 (181)
T ss_dssp             SSCCCCGGGTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred             cCCCCCcccCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHH
Confidence            3443 445688999999999999999999888899999888888888999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcccccC--------CCCCCCCChhHHHH
Q 022460          211 AGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVYLFL--------SYINYPPDILIIYL  282 (297)
Q Consensus       211 A~~Il~~LDP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~~~~q--------~w~~d~~D~eLl~L  282 (297)
                      |++|++.|||++ .|.+++||++|....+.++|||+++||++++||||||+|.+|..|        +|.|+++|+||+.|
T Consensus        84 A~~il~~ldp~~-~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f~~~~~D~eL~~l  162 (181)
T d1ta0a_          84 ADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDL  162 (181)
T ss_dssp             HHHHHHHHCSSC-CEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCCSSCTTCCHHHHH
T ss_pred             HHHHHHHhccCC-ceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCcCCCCCcHHHHHH
Confidence            999999999997 588999999999999999999999999999999999999999988        89999999999999


Q ss_pred             HHHHHHHHhhhcc
Q 022460          283 SFYINASLDILYS  295 (297)
Q Consensus       283 ~p~L~~La~v~s~  295 (297)
                      ++||+.|+....+
T Consensus       163 ~~~L~~l~~~~DV  175 (181)
T d1ta0a_         163 LPFFEQLSRVDDV  175 (181)
T ss_dssp             HHHHHHHTTCSCH
T ss_pred             HHHHHHHccCCcH
Confidence            9999999987654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=7.5e-09  Score=84.94  Aligned_cols=120  Identities=19%  Similarity=0.164  Sum_probs=78.9

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeee-ecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCcc-ccHHHHHHhh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIH-SKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQS-IYAGQLLDIL  218 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~-~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~-~YA~~Il~~L  218 (297)
                      ++++||||||||+.+.........+..... .-.....-.++..||+.++|++|.+. +.+.|-|++.. .++..+++.+
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~   84 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF   84 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT
T ss_pred             CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc
Confidence            368999999999976543322222211110 00001223478899999999999976 99999997654 6788888988


Q ss_pred             cCCCceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCcc
Q 022460          219 DPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       219 DP~~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~~  264 (297)
                      .... +|........  .....+.+-++.+|.+++++|+|||++.-
T Consensus        85 ~~~~-~~~~~~~~~k--p~~~~~~~~~~~~~~~~~~~l~igD~~~d  127 (164)
T d1u7pa_          85 DLGK-YFIQREIYPG--SKVTHFERLHHKTGVPFSQMVFFDDENRN  127 (164)
T ss_dssp             TCGG-GCSEEEESSS--CHHHHHHHHHHHHCCCGGGEEEEESCHHH
T ss_pred             cccc-cceeeecccC--CChHHHHHHHHHhCCChHHEEEEcCCHHH
Confidence            7764 4554432211  11223555667779999999999999843

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.19  E-value=2.1e-07  Score=73.80  Aligned_cols=114  Identities=13%  Similarity=0.078  Sum_probs=68.0

Q ss_pred             CCCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhh
Q 022460          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~L  218 (297)
                      .+++++|+|+||||+.+......  ++.   .+.      -....|++.++|+.+.+ -|+|++.|+....++...++.|
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~~--~~~---~~~------~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l   73 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGPY--DLE---KCD------TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY   73 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCTT--CGG---GGG------GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH
T ss_pred             CCCcEEEEEcCCCcEeCCCCCcC--Ccc---ccc------cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH
Confidence            46679999999999976543211  111   000      12468999999999986 6999999999887776665555


Q ss_pred             cC--------CCceeeeEEeccCeeeeCCc-ee-eeccccCCCCCcE-EEEECCCcc
Q 022460          219 DP--------NQTLIGQRVYRDSCVFADGE-YL-KDLTILGRDLARI-AIVDNTPQV  264 (297)
Q Consensus       219 DP--------~~~~f~~rL~Rd~C~~~~g~-~i-KDLs~Lgrdl~~v-VIIDDsp~~  264 (297)
                      ..        .+..+.....+..+...... +. .-|..+..+..++ ++|||++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~d  130 (149)
T d1ltqa1          74 RMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQV  130 (149)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHH
T ss_pred             HHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHH
Confidence            33        22223344445544332111 11 1122334555565 457999853

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.93  E-value=5.8e-07  Score=74.14  Aligned_cols=83  Identities=13%  Similarity=0.060  Sum_probs=66.3

Q ss_pred             EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeee-eCCceeeeccccCCCCCcEEEE
Q 022460          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-ADGEYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~-~~g~~iKDLs~Lgrdl~~vVII  258 (297)
                      .....||+.++|+.+++.+.++|.|++...++..+++.+.-.. +|...+..+.... ....+.+-+.++|.+.+++|+|
T Consensus        82 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~-~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             cccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccc-cccccccccccccccccccchhhhhhhcccccceee
Confidence            3567999999999999999999999999999999999988774 7887765444221 1123455667789999999999


Q ss_pred             ECCCc
Q 022460          259 DNTPQ  263 (297)
Q Consensus       259 DDsp~  263 (297)
                      .|++.
T Consensus       161 GDs~~  165 (210)
T d2ah5a1         161 GDTKF  165 (210)
T ss_dssp             ESSHH
T ss_pred             cCCHH
Confidence            99963

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.70  E-value=1.1e-05  Score=67.35  Aligned_cols=82  Identities=12%  Similarity=0.116  Sum_probs=62.2

Q ss_pred             EEeCccHHHHHHHHhcC--cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ce---eeeccccCCCC
Q 022460          181 VRQRPYLHMFLEAVASM--FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EY---LKDLTILGRDL  252 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~--fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~---iKDLs~Lgrdl  252 (297)
                      +..-||+.++|+.+.+.  +.+.|.|++....+..+++.++-.. +|+..++.+.....+.   .+   .+-+...|.+.
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p  168 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPFGAFADDALDRNELPHIALERARRMTGANYSP  168 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc-cccccccccccccccchhHHHHHHhhhhcccCCCh
Confidence            45679999999999864  7889999999999999999998875 7888887765333222   12   22333337788


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      +++|.|.|++.
T Consensus       169 ~~~l~VGD~~~  179 (228)
T d2hcfa1         169 SQIVIIGDTEH  179 (228)
T ss_dssp             GGEEEEESSHH
T ss_pred             hHheeecCChH
Confidence            99999999973

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.61  E-value=3.8e-05  Score=60.98  Aligned_cols=96  Identities=11%  Similarity=0.168  Sum_probs=63.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +|+++|+||||++....     +              +.+..|++-++|+.+.+ -++|+||||-...+-...++-|.-+
T Consensus         1 mti~vDiDGTl~~~~~~-----~--------------~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~   61 (122)
T d2obba1           1 MTIAVDFDGTIVEHRYP-----R--------------IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR   61 (122)
T ss_dssp             CEEEECCBTTTBCSCTT-----S--------------CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             CEEEEEcCCCcCCCCCC-----c--------------cccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHc
Confidence            58999999999863211     0              12367999999999975 5999999999999999899999888


Q ss_pred             CceeeeEEeccCeeeeCCceeeeccccCCCCCcEEEEECCCc
Q 022460          222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       222 ~~~f~~rL~Rd~C~~~~g~~iKDLs~Lgrdl~~vVIIDDsp~  263 (297)
                      |-.+........    .+.....  ...+.+.--++|||...
T Consensus        62 ~i~yd~i~~~~~----~~~~~~~--~~~~Kp~ad~yIDDKai   97 (122)
T d2obba1          62 GLEFYAANKDYP----EEERDHQ--GFSRKLKADLFIDDRNV   97 (122)
T ss_dssp             TCCCSEESSSST----TC---CC--SCCSSCCCSEEECTTST
T ss_pred             CCCceehhccCc----cCccccc--eecCCccccEEEeCCcc
Confidence            744432211110    1111121  22333344579999864

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=6e-05  Score=61.86  Aligned_cols=109  Identities=16%  Similarity=0.173  Sum_probs=66.3

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc----ccc------
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ----SIY------  210 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~----~~Y------  210 (297)
                      ++.++||.||||+.....     .+.  +.  ...   .++.-||+.+.|+.+.+ .|.++|+|...    ..+      
T Consensus         2 ~K~i~~D~DGtL~~~~~~-----~~~--~~--~~~---~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~   69 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPS-----DFQ--VD--RFD---KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFD   69 (161)
T ss_dssp             CEEEEECCBTTTBCCC-------CCC--CC--SGG---GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHH
T ss_pred             CcEEEEeCCCCeEeeCCC-----CCc--cC--CHH---HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhh
Confidence            678999999999963221     111  10  000   14578999999999997 59999999853    111      


Q ss_pred             --HHHHHHhhcCCCceeeeEEe-----ccCeeee---CCceeeeccccCCCCCcEEEEECCC
Q 022460          211 --AGQLLDILDPNQTLIGQRVY-----RDSCVFA---DGEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       211 --A~~Il~~LDP~~~~f~~rL~-----Rd~C~~~---~g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                        ...+.+.+...|-.+...++     .+.|...   .+.+.+=+..+|-+++++++|-|+.
T Consensus        70 ~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~  131 (161)
T d2fpwa1          70 GPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA  131 (161)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSH
T ss_pred             hhhhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCH
Confidence              12244455555543444343     3344432   3456667777899999999999986

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=5.8e-05  Score=62.51  Aligned_cols=83  Identities=12%  Similarity=0.180  Sum_probs=58.6

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccC-eeeeC-------------Cc-eeee
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-CVFAD-------------GE-YLKD  244 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~-C~~~~-------------g~-~iKD  244 (297)
                      +..+||+.++|+.+.+ .+.++|.|++.+.+++.+++.+.+...++...+.-+. -....             +. ..+=
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  153 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  153 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence            5689999999999975 5999999999999999999998876544444443111 00000             00 0122


Q ss_pred             ccccCCCCCcEEEEECCCc
Q 022460          245 LTILGRDLARIAIVDNTPQ  263 (297)
Q Consensus       245 Ls~Lgrdl~~vVIIDDsp~  263 (297)
                      +..++.+.++++.|=|+..
T Consensus       154 ~~~~~~~~~~~i~iGDs~~  172 (226)
T d2feaa1         154 IHELSEPNQYIIMIGDSVT  172 (226)
T ss_dssp             HHHHCCTTCEEEEEECCGG
T ss_pred             HHHhcCCCceEEEEeCchh
Confidence            4455888899999999974

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.03  E-value=0.00013  Score=62.26  Aligned_cols=106  Identities=19%  Similarity=0.199  Sum_probs=67.8

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc------------c
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ------------S  208 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~------------~  208 (297)
                      .+.|.||+||||++...       +...      ..  -+++-||+.+.|++|.+ -|.++|.|...            .
T Consensus        23 ~~Aif~DrDGtl~~~~~-------y~~~------~~--~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~   87 (209)
T d2o2xa1          23 LPALFLDRDGTINVDTD-------YPSD------PA--EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFA   87 (209)
T ss_dssp             CCCEEECSBTTTBCCCS-------CTTC------GG--GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHH
T ss_pred             CCEEEEeCCCCeECCCC-------CCCC------HH--HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhh
Confidence            45789999999997421       1100      00  13467999999999997 59999999732            1


Q ss_pred             ccHHHHHHhhcCCCceeeeEEecc------------CeeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          209 IYAGQLLDILDPNQTLIGQRVYRD------------SCVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       209 ~YA~~Il~~LDP~~~~f~~rL~Rd------------~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      ...+.+.+.|-..|-.+...++..            +|.+.+   +.+.+-+..+|.+++++++|=|+.
T Consensus        88 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~  156 (209)
T d2o2xa1          88 AVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL  156 (209)
T ss_dssp             HHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH
T ss_pred             hhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCH
Confidence            233445555555554444444432            233322   234556667799999999999985

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=96.88  E-value=0.00033  Score=55.68  Aligned_cols=67  Identities=27%  Similarity=0.250  Sum_probs=49.2

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCc------------cc
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------SI  209 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~------------~~  209 (297)
                      +++++||||||++...     .++.            ..+..|.+-++|..+. +-+.|+||||..            ..
T Consensus         2 K~i~~DiDGTI~~~~~-----~~y~------------~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~   64 (124)
T d1xpja_           2 KKLIVDLDGTLTQANT-----SDYR------------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (124)
T ss_dssp             CEEEECSTTTTBCCCC-----SCGG------------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEeCCCCeECCCC-----CCcC------------ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHH
Confidence            5899999999986432     1111            1357899999999995 569999999984            44


Q ss_pred             cHHHHHHhhcCCCceee
Q 022460          210 YAGQLLDILDPNQTLIG  226 (297)
Q Consensus       210 YA~~Il~~LDP~~~~f~  226 (297)
                      +.+...+.|.-.|-.++
T Consensus        65 ~~~~T~~wL~~~gI~Yd   81 (124)
T d1xpja_          65 TLPIITEWLDKHQVPYD   81 (124)
T ss_dssp             THHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHHHHcCCCce
Confidence            66778888887774343

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=96.82  E-value=0.00027  Score=57.74  Aligned_cols=82  Identities=10%  Similarity=0.038  Sum_probs=67.3

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      +..+||+.++|+++.+.+-++|-|++....+..+++.+.-.+ +|+..+..+.......   .+.+-+.++|.+++++|+
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccccccc-cccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            567899999999999899999999999999999999987764 7888877665443322   355666778999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       160 VgDs~~  165 (207)
T d2hdoa1         160 IGDSVS  165 (207)
T ss_dssp             EESSHH
T ss_pred             ecCCHH
Confidence            999973

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.78  E-value=0.00038  Score=57.75  Aligned_cols=82  Identities=17%  Similarity=0.172  Sum_probs=67.6

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...+||+.++|+.+++.+.++|.|.+...++..+++.++-.+ +|+..++.+.....+   ..|.+=+.++|.+.+++++
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~  177 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKD-LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGG-GCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhccccccc-ccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence            557899999999999899999999999999999999988764 798888866544322   2356667788999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       178 vgD~~~  183 (230)
T d1x42a1         178 VGDNPV  183 (230)
T ss_dssp             EESCTT
T ss_pred             eecCcH
Confidence            999863

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.55  E-value=0.00096  Score=54.02  Aligned_cols=80  Identities=13%  Similarity=-0.007  Sum_probs=62.8

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +...||+.++|+.+.+. +.++|.|++. .++..+++.++-.+ +|+..+..+.....+   ..|.+=++.+|.++++++
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~-~~~~~~l~~~gl~~-~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l  158 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKG-NNAFTILKDLGVES-YFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  158 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHHTCGG-GEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccc-hhhhhhhhhccccc-ccccccccccccccchhHHHHHHHHHHhCCCCceEE
Confidence            45789999999999875 9999999865 47888999988764 798887765433321   235556677799999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      +|+|++
T Consensus       159 ~VgD~~  164 (204)
T d2go7a1         159 YIGDRT  164 (204)
T ss_dssp             EEESSH
T ss_pred             EEeCCH
Confidence            999997

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0011  Score=54.05  Aligned_cols=81  Identities=12%  Similarity=0.112  Sum_probs=66.4

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.+ +|+..+..+.-...+   ..|.+-++.+|.+++++++
T Consensus        88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~-~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  166 (218)
T d1te2a_          88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  166 (218)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccchHHHHHHHhhhccccccccccccccccccccccccccc-cccccccccccccchhhHHHHHHHHHHcCCCchhcEE
Confidence            3579999999999864 9999999999999999999997764 899888866533221   2366777888999999999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       167 igD~~~  172 (218)
T d1te2a_         167 LEDSVN  172 (218)
T ss_dssp             EESSHH
T ss_pred             EeeCHH
Confidence            999973

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=96.33  E-value=0.00097  Score=54.06  Aligned_cols=83  Identities=14%  Similarity=0.145  Sum_probs=67.1

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcE
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARI  255 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~v  255 (297)
                      ..+..||+.++|+++.+. +.++|.|.+.+.+++.+++.++-.+ +|...+..+......   ..+.+-+..++.+.+++
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~  171 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI  171 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh-hccccccccccccccccchhhHHHHHHhhhhhhcc
Confidence            456789999999999865 9999999999999999999998764 788888755433222   23556667789999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      |+|+|++.
T Consensus       172 ~~igD~~~  179 (224)
T d2hsza1         172 LFVGDSQN  179 (224)
T ss_dssp             EEEESSHH
T ss_pred             chhcCcHH
Confidence            99999973

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.03  E-value=0.0024  Score=52.83  Aligned_cols=81  Identities=10%  Similarity=0.092  Sum_probs=66.1

Q ss_pred             EeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEEE
Q 022460          182 RQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIV  258 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVII  258 (297)
                      ...|++.++|+++++.+.++|.|++...++..+++...-. .+|++.+..++....+.   .|.+=++++|.+++++++|
T Consensus       109 ~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i  187 (247)
T d2gfha1         109 ILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQ-SYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV  187 (247)
T ss_dssp             CCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             ccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccc-ccccccccccccccchhhhhhHHHHHHHhhcCHHhccee
Confidence            4679999999999999999999999999999999998765 47888887765443221   3556667789999999999


Q ss_pred             ECCCc
Q 022460          259 DNTPQ  263 (297)
Q Consensus       259 DDsp~  263 (297)
                      .|++.
T Consensus       188 GD~~~  192 (247)
T d2gfha1         188 GDTLE  192 (247)
T ss_dssp             ESCTT
T ss_pred             ccChH
Confidence            99864

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0021  Score=52.45  Aligned_cols=105  Identities=18%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccc--------cHHH
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSI--------YAGQ  213 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~--------YA~~  213 (297)
                      +.|+||+||||+.-..       +...      ...  ++.=||+.+.|+.+.+ .|.++|.|.....        ....
T Consensus         3 ~Av~~DrDGtl~~~~~-------y~~~------~~~--~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~   67 (182)
T d2gmwa1           3 PAIFLDRDGTINVDHG-------YVHE------IDN--FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFET   67 (182)
T ss_dssp             CEEEECSBTTTBCCCS-------SCCS------GGG--CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHH
T ss_pred             CEEEEeCCCCccCCCC-------CCCC------HHH--eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhh
Confidence            4799999999986321       1100      001  3456999999999996 4999999986531        1111


Q ss_pred             H----HHhhcCCCceeeeEEe------------ccCeeeeC---CceeeeccccCCCCCcEEEEECCC
Q 022460          214 L----LDILDPNQTLIGQRVY------------RDSCVFAD---GEYLKDLTILGRDLARIAIVDNTP  262 (297)
Q Consensus       214 I----l~~LDP~~~~f~~rL~------------Rd~C~~~~---g~~iKDLs~Lgrdl~~vVIIDDsp  262 (297)
                      +    ...+-..+..+....+            ++.|.+.+   |.+.+-+++++.+++++++|=|+.
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~  135 (182)
T d2gmwa1          68 LTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL  135 (182)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH
T ss_pred             hhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCH
Confidence            1    1111111111222222            34454432   345667778899999999999985

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.003  Score=51.14  Aligned_cols=52  Identities=15%  Similarity=0.179  Sum_probs=37.0

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHH
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLL  215 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il  215 (297)
                      +++.+++||||||++...                       ..-|...+.|+++.+...+++-|++....+...+
T Consensus         2 ~~kl~~fDlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~g~~~i~Tgr~~~~~~~~~   53 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQ-----------------------KITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQL   53 (243)
T ss_dssp             CSEEEEEESBTTTBCTTS-----------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHH
T ss_pred             CCEEEEEcCcCCeeCCCC-----------------------cCCHHHHHHHHHHHcCCCEEEEcCCChHHhHHHH
Confidence            456788899999997421                       1367788999999988877777776544444433

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=95.23  E-value=0.0023  Score=53.51  Aligned_cols=81  Identities=10%  Similarity=-0.047  Sum_probs=64.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCcee-eeEEeccCeeeeC---CceeeeccccCC-CCCc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFAD---GEYLKDLTILGR-DLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f-~~rL~Rd~C~~~~---g~~iKDLs~Lgr-dl~~  254 (297)
                      +...||+.++|++|.+. +.+.|.|++.+.+++.+++.+.-.+ +| +..+..+++...+   ..|.+-+.++|. +.+.
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~-~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~  176 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  176 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc-cccccccccccccccccChHHHHHHHHHhCCCCcce
Confidence            45789999999999875 9999999999999999999987665 44 5555566554322   247788888887 5689


Q ss_pred             EEEEECCC
Q 022460          255 IAIVDNTP  262 (297)
Q Consensus       255 vVIIDDsp  262 (297)
                      +|+|+|++
T Consensus       177 ~v~VgDs~  184 (257)
T d1swva_         177 MIKVGDTV  184 (257)
T ss_dssp             EEEEESSH
T ss_pred             EEEEeCCh
Confidence            99999996

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=94.70  E-value=0.013  Score=47.18  Aligned_cols=81  Identities=12%  Similarity=0.074  Sum_probs=67.9

Q ss_pred             EEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vV  256 (297)
                      ....|++.++|+.+. +.+.++|.|.+...++..++....... +|+..++.++....+.   .|.+=++++|.++++++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~-~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l  170 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  170 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc-cccceeeeeeeeccccHHHHHHHHHHHhCCCCceEE
Confidence            457899999999996 468999999999999999999887764 7999888776554332   46677888899999999


Q ss_pred             EEECCC
Q 022460          257 IVDNTP  262 (297)
Q Consensus       257 IIDDsp  262 (297)
                      .|+|++
T Consensus       171 ~VgD~~  176 (220)
T d1zrna_         171 FVASNA  176 (220)
T ss_dssp             EEESCH
T ss_pred             EEecCh
Confidence            999997

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=94.66  E-value=0.016  Score=48.24  Aligned_cols=55  Identities=20%  Similarity=0.207  Sum_probs=43.9

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      .+.+++||||||++...                       .+-|...+.|+++.+. ..++|-|..+...+..+++.+.
T Consensus         4 iKli~~DlDGTL~~~~~-----------------------~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~   59 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDH-----------------------TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELH   59 (271)
T ss_dssp             CCEEEECCCCCCSCTTS-----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTT
T ss_pred             eeEEEEeCCccccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhc
Confidence            45799999999987421                       1247778899998765 8999999989899999998874

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.023  Score=47.67  Aligned_cols=53  Identities=21%  Similarity=0.298  Sum_probs=38.1

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      -+.+++||||||++...                        .=|+..+|++.+.+. +.+++.|.+.....+.+.+.|
T Consensus         3 ik~VifDlDGTL~~~~~------------------------~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l   56 (250)
T d2c4na1           3 IKNVICDIDGVLMHDNV------------------------AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRF   56 (250)
T ss_dssp             CCEEEEECBTTTEETTE------------------------ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHH
T ss_pred             CCEEEEECCCeeEECCC------------------------cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHH
Confidence            36899999999987411                        127888999999864 888888876655555554443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.30  E-value=0.032  Score=44.60  Aligned_cols=58  Identities=10%  Similarity=0.117  Sum_probs=43.1

Q ss_pred             CcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcC
Q 022460          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      -+.+++||||||++....                       ..|-..+.|+++.+. ..+++-|.-....+..++..+..
T Consensus         2 iK~i~~D~DGTL~~~~~~-----------------------i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~   58 (230)
T d1wr8a_           2 IKAISIDIDGTITYPNRM-----------------------IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGT   58 (230)
T ss_dssp             CCEEEEESTTTTBCTTSC-----------------------BCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTC
T ss_pred             ceEEEEecCCCCcCCCCc-----------------------cCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCC
Confidence            468999999999974210                       246677788888654 78888888777888888888766


Q ss_pred             CC
Q 022460          221 NQ  222 (297)
Q Consensus       221 ~~  222 (297)
                      .+
T Consensus        59 ~~   60 (230)
T d1wr8a_          59 SG   60 (230)
T ss_dssp             CS
T ss_pred             Cc
Confidence            65

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.26  E-value=0.039  Score=46.27  Aligned_cols=107  Identities=18%  Similarity=0.205  Sum_probs=63.8

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCc--------ccc-
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ--------SIY-  210 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~--------~~Y-  210 (297)
                      .++.++||+||||+......      .+...    ... +..+.|++.+.|+.+.+ .|.|+|+|...        ..- 
T Consensus        20 ~~Kia~fDrDGtLik~~~~~------~~~~~----~~d-~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~   88 (195)
T d1yj5a1          20 QGKVAAFDLDGTLITTRSGK------VFPTS----PSD-WRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVF   88 (195)
T ss_dssp             CSCEEEECSBTTTEECSSSC------SSCSS----TTC-CEESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHH
T ss_pred             cCcEEEEECCCceEeeCCCC------cCCCC----hhh-ceeccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHH
Confidence            46789999999999853211      01000    001 23468999999999986 59999999853        111 


Q ss_pred             ---HHHHHHhhcCCCceeeeEEeccCeeeeC---Cce---eeecc-ccCCCCCcEEEEECC
Q 022460          211 ---AGQLLDILDPNQTLIGQRVYRDSCVFAD---GEY---LKDLT-ILGRDLARIAIVDNT  261 (297)
Q Consensus       211 ---A~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~---iKDLs-~Lgrdl~~vVIIDDs  261 (297)
                         -+.+++.|.-.   +.....-.+|.+..   |.+   .++.. .++.|+++.+.|=|.
T Consensus        89 ~~~~~~i~~~l~~~---~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~  146 (195)
T d1yj5a1          89 KGKVEAVLEKLGVP---FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDA  146 (195)
T ss_dssp             HHHHHHHHHHHTSC---CEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSC
T ss_pred             HHHHHHHHHHcCCC---ccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCc
Confidence               23455555432   22233345565543   222   23333 235788889999885

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.031  Score=44.66  Aligned_cols=58  Identities=21%  Similarity=0.182  Sum_probs=42.8

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      ++..++.||||||+....                       ..-|...+.|+++.+. ..+++-|.-....+.+++..+.
T Consensus         3 ~~~li~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~   59 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHS-----------------------YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLG   59 (232)
T ss_dssp             CCEEEEEECTTTTSCSSC-----------------------CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTT
T ss_pred             CCEEEEEECCCCccCCcC-----------------------cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhc
Confidence            345667799999996421                       1245667888888755 8888888888888888888876


Q ss_pred             CC
Q 022460          220 PN  221 (297)
Q Consensus       220 P~  221 (297)
                      -.
T Consensus        60 ~~   61 (232)
T d1xvia_          60 LQ   61 (232)
T ss_dssp             CT
T ss_pred             cC
Confidence            54

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.91  E-value=0.0052  Score=49.91  Aligned_cols=80  Identities=13%  Similarity=0.180  Sum_probs=62.6

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEecc------CeeeeCCceeeeccccCCCCCc
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD------SCVFADGEYLKDLTILGRDLAR  254 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd------~C~~~~g~~iKDLs~Lgrdl~~  254 (297)
                      +...||+.++|+++...  .+|-|.+...++..+++.++... +|...++..      .+......|.+=+..+|.++++
T Consensus        84 ~~~~~g~~~~L~~l~~~--~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~  160 (222)
T d2fdra1          84 VKIIDGVKFALSRLTTP--RCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  160 (222)
T ss_dssp             CCBCTTHHHHHHHCCSC--EEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cchhhhHHHHhhhcccc--ceeeeecchhhhhhhhccccccc-ccceeecccccccccccccCHHHHHHHHHhhCCCCce
Confidence            56789999999999764  56889999999999999998875 677666532      2222223467778888999999


Q ss_pred             EEEEECCCc
Q 022460          255 IAIVDNTPQ  263 (297)
Q Consensus       255 vVIIDDsp~  263 (297)
                      +|+|+|++.
T Consensus       161 ~l~vgDs~~  169 (222)
T d2fdra1         161 VVVVEDSVH  169 (222)
T ss_dssp             EEEEESSHH
T ss_pred             EEEEcCCHH
Confidence            999999973

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.024  Score=45.28  Aligned_cols=47  Identities=19%  Similarity=0.291  Sum_probs=31.6

Q ss_pred             EEE-EeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHH
Q 022460          144 TLV-LDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQ  213 (297)
Q Consensus       144 tLV-LDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~  213 (297)
                      +|| +||||||+....                       ..=|...+-|+++.+.--+++.|.+....+..
T Consensus         2 ~i~lFDlDGTLl~~~~-----------------------~is~~~~~~i~~l~~~g~~~i~tgrr~~~~~~   49 (244)
T d2fuea1           2 VLCLFDVDGTLTPARQ-----------------------KIDPEVAAFLQKLRSRVQIGVVGGSDYCKIAE   49 (244)
T ss_dssp             EEEEEESBTTTBSTTS-----------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHH
T ss_pred             EEEEEccccCccCCCC-----------------------cCCHHHHHHHHHHHhCCCEEEEecCChhhhhh
Confidence            456 499999996421                       02355688888888887777777775444433

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.84  E-value=0.043  Score=44.30  Aligned_cols=55  Identities=15%  Similarity=0.161  Sum_probs=41.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||++...                         .+-..+-|+++. +...+++-|.-....+..+++.+...
T Consensus         3 Kli~~DlDGTLl~~~~-------------------------~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~   57 (243)
T d1wzca1           3 RLIFLDIDKTLIPGYE-------------------------PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (243)
T ss_dssp             EEEEECCBTTTBSSSC-------------------------SGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEeCCCCCCCCCC-------------------------CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence            5899999999996311                         122345566665 45888888988999999999999876


Q ss_pred             C
Q 022460          222 Q  222 (297)
Q Consensus       222 ~  222 (297)
                      .
T Consensus        58 ~   58 (243)
T d1wzca1          58 T   58 (243)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=93.60  E-value=0.02  Score=46.24  Aligned_cols=80  Identities=9%  Similarity=0.100  Sum_probs=61.4

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCCCcEE
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDLARIA  256 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl~~vV  256 (297)
                      +..-||+.++|+.+.+. +.+++-|++  .++..+++.+.-.+ +|...++.+.....+   ..|.+=|+.+|.+.+++|
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l  166 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGG-GCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             ccccCCceeccccccccccceEEEeec--chhhHHHHhhcccc-ccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence            45689999999999864 677777764  66889999987765 788887766533322   236777888899999999


Q ss_pred             EEECCCc
Q 022460          257 IVDNTPQ  263 (297)
Q Consensus       257 IIDDsp~  263 (297)
                      +|+|++.
T Consensus       167 ~VgD~~~  173 (221)
T d1o08a_         167 GLEDSQA  173 (221)
T ss_dssp             EEESSHH
T ss_pred             EEecCHH
Confidence            9999973

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.019  Score=46.15  Aligned_cols=82  Identities=11%  Similarity=0.037  Sum_probs=60.2

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe-ccCeeee---CCceeeeccccCCCCCcE
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFA---DGEYLKDLTILGRDLARI  255 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~---~g~~iKDLs~Lgrdl~~v  255 (297)
                      ...+||+.++|+++.+ .+.++|.|.+....+..++..+.-.. ++..... -+.....   ...|.+-+.++|.+++++
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~  204 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD-ILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI  204 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC-CGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch-hhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence            4568999999999976 59999999999999888888776443 4442211 1221111   124677788889999999


Q ss_pred             EEEECCCc
Q 022460          256 AIVDNTPQ  263 (297)
Q Consensus       256 VIIDDsp~  263 (297)
                      +.|+|++.
T Consensus       205 l~vgD~~~  212 (253)
T d1zs9a1         205 LFLTDVTR  212 (253)
T ss_dssp             EEEESCHH
T ss_pred             EEEeCCHH
Confidence            99999963

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=93.49  E-value=0.048  Score=45.56  Aligned_cols=54  Identities=26%  Similarity=0.237  Sum_probs=38.8

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhh
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDIL  218 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~L  218 (297)
                      +-+.++|||||||++...                       -. |++.++|+++.+. ..+++.|.....-...+.+.+
T Consensus         6 ~ik~vlFDlDGTL~~~~~-----------------------~i-~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~   60 (261)
T d1vjra_           6 KIELFILDMDGTFYLDDS-----------------------LL-PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL   60 (261)
T ss_dssp             GCCEEEECCBTTTEETTE-----------------------EC-TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHH
T ss_pred             hCCEEEEeCCCeeEECCc-----------------------cC-chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            345899999999998421                       12 7889999998764 788888876655555555554

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.46  E-value=0.052  Score=43.07  Aligned_cols=78  Identities=9%  Similarity=-0.028  Sum_probs=56.5

Q ss_pred             EeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          182 RQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       182 ~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ...||+.++|+++++. +.++|.|++. .++..+++.+.-.+ +|+..+..+.....+.   .|..=++.++  ++.+|+
T Consensus        79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~-~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~--~~~~l~  154 (187)
T d2fi1a1          79 ILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLV  154 (187)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEEEECGGGCCCCTTSCHHHHHHHHHTT--CSSEEE
T ss_pred             cccchhHHHHHHHHhhhccccccccCc-cchhhhhhhhcccc-ccccccccccccccCCCHHHHHHHHHHcC--CCCeEE
Confidence            4679999999999865 9999999865 46667899988774 8998877665332221   2333344555  467999


Q ss_pred             EECCCc
Q 022460          258 VDNTPQ  263 (297)
Q Consensus       258 IDDsp~  263 (297)
                      |+|++.
T Consensus       155 vgDs~~  160 (187)
T d2fi1a1         155 IGDRPI  160 (187)
T ss_dssp             EESSHH
T ss_pred             EeCCHH
Confidence            999974

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=93.32  E-value=0.052  Score=45.41  Aligned_cols=55  Identities=16%  Similarity=0.096  Sum_probs=34.9

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP  220 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP  220 (297)
                      +.+++||||||+++..                       ..-|...+.|+++.+.-.+++-|......+..+++.+.+
T Consensus         3 Kli~~DlDGTL~~~~~-----------------------~i~~~~~~al~~l~~~~~~~i~TGR~~~~~~~~~~~~~~   57 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNL-----------------------EISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFK   57 (267)
T ss_dssp             CEEEEECCCCCSCTTS-----------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHSS
T ss_pred             EEEEEeCCccccCCcC-----------------------ccCHHHHHHHHHHHcCCEEEEECCCChHHHHHHHHHhcc
Confidence            3789999999997521                       134666777777776655655555444455556655433

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=93.31  E-value=0.058  Score=44.94  Aligned_cols=56  Identities=20%  Similarity=0.176  Sum_probs=38.9

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||++....                       .=|...+.|+++.+. ..+++-|.-+...+.++++.+..+
T Consensus         2 Kli~~DlDGTLl~~~~~-----------------------i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKHQ-----------------------VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             eEEEEECCccccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence            47999999999974210                       125566777777654 777777776777777777777554

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.86  E-value=0.049  Score=44.33  Aligned_cols=60  Identities=12%  Similarity=0.035  Sum_probs=44.1

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++|+||||+....                       ..-|.+.+-|+.+.+. ..+++-|.....++..+...+...
T Consensus         4 Kli~~D~DGTL~~~~~-----------------------~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~   60 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRDR-----------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   60 (225)
T ss_dssp             CEEEEEHHHHSBCTTS-----------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEecCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC
Confidence            5889999999996421                       1246777788887754 778888887777888888888766


Q ss_pred             Ccee
Q 022460          222 QTLI  225 (297)
Q Consensus       222 ~~~f  225 (297)
                      +.++
T Consensus        61 ~~~i   64 (225)
T d1l6ra_          61 GPVF   64 (225)
T ss_dssp             SCEE
T ss_pred             ceEE
Confidence            5444

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=92.78  E-value=0.046  Score=45.83  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=30.2

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccc
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSI  209 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~  209 (297)
                      +.+++||||||++...                        .=|++.++++.+.+ ...+++-|.+...
T Consensus         3 k~vlFDlDGTL~~~~~------------------------~i~~a~e~l~~l~~~g~~~~~~TN~s~~   46 (253)
T d1wvia_           3 KGYLIDLDGTIYKGKD------------------------RIPAGEDFVKRLQERQLPYILVTNNTTR   46 (253)
T ss_dssp             CEEEEECBTTTEETTE------------------------ECHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred             CEEEEcCcCceEECCC------------------------cCccHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            4799999999998521                        12778888887764 4667777765443

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.25  E-value=0.034  Score=44.44  Aligned_cols=82  Identities=10%  Similarity=-0.040  Sum_probs=60.0

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCC----ccccHHHHHHhhcCCCceeeeEEeccCeeeeC---CceeeeccccCCCC
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAG----QSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILGRDL  252 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas----~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~---g~~iKDLs~Lgrdl  252 (297)
                      ++.+|++.++|+++.+. +.+.|-|.+    ...+...++...... .+|+..++.+.....+   ..|.+=++.+|.++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~-~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p  174 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELS-QHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKP  174 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHG-GGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChH-hhhceeeehhhccCCCCChHHHHHHHHHhCCCc
Confidence            45799999999999875 889999964    344555555555554 3788888866544332   23667777889999


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      +++|+|+|+..
T Consensus       175 ~~~l~IgD~~~  185 (222)
T d1cr6a1         175 NEVVFLDDFGS  185 (222)
T ss_dssp             TSEEEEESSST
T ss_pred             ceEEEEECCHH
Confidence            99999999863

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=92.00  E-value=0.041  Score=45.20  Aligned_cols=55  Identities=22%  Similarity=0.170  Sum_probs=36.8

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      +|+.+|+||||||+.....                       . ..++.+++...+...+++-|......+.++++.+.
T Consensus         2 ~~~li~~DlDGTL~~~~~~-----------------------~-~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~   56 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQA-----------------------L-EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVG   56 (244)
T ss_dssp             CSEEEEECTBTTTBSCHHH-----------------------H-HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHT
T ss_pred             CceEEEEECcccCCCCCCC-----------------------H-HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcC
Confidence            4678889999999853210                       0 22455555556667777777777777777777663

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.94  E-value=0.079  Score=44.11  Aligned_cols=50  Identities=16%  Similarity=0.177  Sum_probs=34.9

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHH
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD  216 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~  216 (297)
                      +++++||||||+....                       .. |++.++|+++.+ ...+++-|..+.+-.+.+.+
T Consensus         3 k~v~fDlDGTL~~~~~-----------------------~i-~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~   53 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGKE-----------------------PI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQ   53 (253)
T ss_dssp             CEEEECCBTTTEETTE-----------------------EC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHH
T ss_pred             CEEEEcCCCccEeCCC-----------------------cC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence            4799999999987411                       13 788899998876 47888888655444444443

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=91.61  E-value=0.035  Score=46.18  Aligned_cols=57  Identities=14%  Similarity=0.186  Sum_probs=38.0

Q ss_pred             cEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCC
Q 022460          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPN  221 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~  221 (297)
                      +.+++||||||+.+...                      ...|...+.|+.+.+. ..+++-|......+.++++.+...
T Consensus         3 Kli~~DlDGTLl~~~~~----------------------~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_           3 KVIVTDMDGTFLNDAKT----------------------YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             CEEEECCCCCCSCTTSC----------------------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             EEEEEeCCccCcCCCCc----------------------CChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            47899999999974211                      1235667777777654 677777776666666666665544

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=90.90  E-value=0.13  Score=42.27  Aligned_cols=57  Identities=14%  Similarity=0.002  Sum_probs=41.2

Q ss_pred             CCcEEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhhc
Q 022460          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (297)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~LD  219 (297)
                      .-+.|++||||||+....       .               ..-|...+.|+++. +...++|-|......+..++..+.
T Consensus         9 ~ikli~~DlDGTLl~~~~-------~---------------~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~   66 (283)
T d2b30a1           9 DIKLLLIDFDGTLFVDKD-------I---------------KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN   66 (283)
T ss_dssp             CCCEEEEETBTTTBCCTT-------T---------------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH
T ss_pred             CccEEEEECCCCCcCCCC-------C---------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhC
Confidence            446899999999984210       0               13566777788876 468899999888888888877663

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=90.83  E-value=0.088  Score=42.53  Aligned_cols=80  Identities=15%  Similarity=0.121  Sum_probs=64.9

Q ss_pred             EEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCCCcEEE
Q 022460          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl~~vVI  257 (297)
                      ....|++.+.|+.+.. +.+.+.|++...++..+++.+.-. .+|+..++.+.....+.   .|.+=++++|.+++++|.
T Consensus        92 ~~~~~~~~~~L~~l~~-~~~~v~s~~~~~~~~~~~~~~~~~-~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~  169 (245)
T d1qq5a_          92 LTPYPDAAQCLAELAP-LKRAILSNGAPDMLQALVANAGLT-DSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (245)
T ss_dssp             CCBCTTHHHHHHHHTT-SEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             cccchhhhHHHHHHhh-hceeEEeccchHHHHHHHhhcccc-cccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence            4567999999999875 578899999999999999988765 47888888766544332   467778888999999999


Q ss_pred             EECCC
Q 022460          258 VDNTP  262 (297)
Q Consensus       258 IDDsp  262 (297)
                      |+|++
T Consensus       170 VgD~~  174 (245)
T d1qq5a_         170 VSSNG  174 (245)
T ss_dssp             EESCH
T ss_pred             EeCCH
Confidence            99997

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.72  E-value=0.042  Score=43.02  Aligned_cols=81  Identities=12%  Similarity=0.149  Sum_probs=58.6

Q ss_pred             EEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCCceeeeEEeccCeeeeC--------Cc-----eeeecc
Q 022460          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--------GE-----YLKDLT  246 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~Rd~C~~~~--------g~-----~iKDLs  246 (297)
                      ....+++.++++.+... +.+++.|++...++........... ++...+..+......        +.     ..+-+.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  152 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh-hhhhhhccccccccccccccccccccccchhhhHHH
Confidence            45789999999999865 8999999999999999999988775 676666655544321        10     011122


Q ss_pred             ccCCCCCcEEEEECCC
Q 022460          247 ILGRDLARIAIVDNTP  262 (297)
Q Consensus       247 ~Lgrdl~~vVIIDDsp  262 (297)
                      .++.+++++|.+-|+.
T Consensus       153 ~~~~~~~~~i~iGDs~  168 (210)
T d1j97a_         153 IEGINLEDTVAVGDGA  168 (210)
T ss_dssp             HHTCCGGGEEEEESSG
T ss_pred             HhcccccceEEecCCc
Confidence            3477788999999987

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.74  E-value=0.1  Score=41.37  Aligned_cols=49  Identities=22%  Similarity=0.183  Sum_probs=33.0

Q ss_pred             EEEEeCCcceeeeeccCCCCCCceeeeeecCceeeEEEEeCccHHHHHHHHhcCcEEEEEcCCcccc
Q 022460          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIY  210 (297)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~~V~~RP~l~eFL~~ls~~fEIvIfTas~~~Y  210 (297)
                      .|++||||||+.-...+             .     .-...|-+.+.|+++.+...|+|-|......
T Consensus         2 Li~~DlDGTL~~~~~~~-------------~-----~~~i~~~~~~~l~~l~~~~~v~i~TGR~~~~   50 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNP-------------E-----ESYADAGLLSLISDLKERFDTYIVTGRSPEE   50 (229)
T ss_dssp             EEEEECBTTTBCCCSCG-------------G-----GCCCCHHHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred             EEEEEecCCCCCCCCCh-------------h-----hCCCCHHHHHHHHHHhhCCCEEEEcCCCHHH
Confidence            58999999998421110             0     0125688899999998878888766655433

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=88.43  E-value=0.019  Score=44.10  Aligned_cols=85  Identities=13%  Similarity=0.138  Sum_probs=62.9

Q ss_pred             eEEEEeCccHHHHHHHHh-cCcEEEEEcCCccccHHHHHHhh-cCCCceeeeEEeccCeeeeCC---ceeeeccccCCCC
Q 022460          178 TVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL-DPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDL  252 (297)
Q Consensus       178 ~~~V~~RP~l~eFL~~ls-~~fEIvIfTas~~~YA~~Il~~L-DP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl  252 (297)
                      ......+|++.+++..+. +.+.+++.|++....+...+..+ ... .+|++.++.+.......   .|.+-++.+|-++
T Consensus        80 ~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~  158 (197)
T d2b0ca1          80 AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADHIYLSQDLGMRKPEARIYQHVLQAEGFSP  158 (197)
T ss_dssp             TCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             HhccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch-hhccceeecccccccccchHHHHHHHHhcCCCC
Confidence            355789999999999886 57999999999888877766654 333 36888777654332222   3556677789999


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      +++|.|+|++.
T Consensus       159 ~~~l~vgDs~~  169 (197)
T d2b0ca1         159 SDTVFFDDNAD  169 (197)
T ss_dssp             GGEEEEESCHH
T ss_pred             CeEEEEeCCHH
Confidence            99999999974

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.08  E-value=0.035  Score=43.74  Aligned_cols=82  Identities=9%  Similarity=-0.052  Sum_probs=58.3

Q ss_pred             EEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHh----hcCCCceeeeEEeccCeeeeCC---ceeeeccccCCCC
Q 022460          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI----LDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDL  252 (297)
Q Consensus       181 V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~----LDP~~~~f~~rL~Rd~C~~~~g---~~iKDLs~Lgrdl  252 (297)
                      ...+|++.++|+.+.+ .+.++|-|++....+...+..    .+-. .+|+..++.++....+.   .|.+=++.+|.++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p  176 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK-MHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP  176 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH-TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChH-hhccEEEeccccccchhHHHHHHHHhhhcccCc
Confidence            4679999999999986 589999998866655444332    1211 35788887665443322   3566777889999


Q ss_pred             CcEEEEECCCc
Q 022460          253 ARIAIVDNTPQ  263 (297)
Q Consensus       253 ~~vVIIDDsp~  263 (297)
                      +++|+|+|++.
T Consensus       177 ~e~l~VgD~~~  187 (225)
T d1zd3a1         177 SEVVFLDDIGA  187 (225)
T ss_dssp             GGEEEEESCHH
T ss_pred             cceeEEecCHH
Confidence            99999999863

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=84.61  E-value=0.2  Score=42.32  Aligned_cols=75  Identities=13%  Similarity=0.167  Sum_probs=42.8

Q ss_pred             CCCcEEEEeCCcceeeeecc--------CCCCCCce-eeeee---cCceeeEEEEeCccHHHHHHHHhc-CcEEEEEcCC
Q 022460          140 GLPITLVLDLDETLVHSSFD--------NCKDADFS-FPIHS---KMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG  206 (297)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~--------~~~~~d~~-~~i~~---~~~~~~~~V~~RP~l~eFL~~ls~-~fEIvIfTas  206 (297)
                      .+++.+|||+|||++.++.-        .....++. .+..+   .... .-.-..=||+.+|++.+.+ -.+|+.-|.-
T Consensus        33 ~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~-~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR  111 (209)
T d2b82a1          33 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGW-DEFSIPKEVARQLIDMHVRRGDAIFFVTGR  111 (209)
T ss_dssp             CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTG-GGGCEECHHHHHHHHHHHHHTCEEEEEECS
T ss_pred             CCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhccc-ccccCcchhHHHHHHHHHHcCCeEEEEeCC
Confidence            44569999999999987531        00111110 01000   0000 0001134799999999986 5999999987


Q ss_pred             ccccHHHHH
Q 022460          207 QSIYAGQLL  215 (297)
Q Consensus       207 ~~~YA~~Il  215 (297)
                      .+...+..+
T Consensus       112 ~~~~~e~T~  120 (209)
T d2b82a1         112 SPTKTETVS  120 (209)
T ss_dssp             CCCSSCCHH
T ss_pred             chhhHHHHH
Confidence            655544433

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=81.49  E-value=0.24  Score=39.13  Aligned_cols=15  Identities=47%  Similarity=0.488  Sum_probs=13.2

Q ss_pred             cEEEEeCCcceeeee
Q 022460          143 ITLVLDLDETLVHSS  157 (297)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (297)
                      +++|||+||||+++.
T Consensus         5 k~iiFD~DGTL~Ds~   19 (224)
T d2hsza1           5 KLIGFDLDGTLVNSL   19 (224)
T ss_dssp             SEEEECSBTTTEECH
T ss_pred             CEEEEeCCCCcccCH
Confidence            689999999999864

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.93  E-value=0.28  Score=43.13  Aligned_cols=88  Identities=15%  Similarity=0.124  Sum_probs=58.0

Q ss_pred             EEEeCccHHHHHHHHhc-CcEEEEEcCCccccHHHHHHhhcCCC---ceeeeEEeccCeeee---CCc----eeee----
Q 022460          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ---TLIGQRVYRDSCVFA---DGE----YLKD----  244 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~-~fEIvIfTas~~~YA~~Il~~LDP~~---~~f~~rL~Rd~C~~~---~g~----~iKD----  244 (297)
                      -+.+|||+.+|++.|.+ ...++|+|+|...+++++++.+...-   +++..++.-+.....   .|.    +.|.    
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            36799999999999986 58999999999999999999984331   245544442221111   111    1111    


Q ss_pred             ----ccccCCCCCcEEEEECCCccccc
Q 022460          245 ----LTILGRDLARIAIVDNTPQVYLF  267 (297)
Q Consensus       245 ----Ls~Lgrdl~~vVIIDDsp~~~~~  267 (297)
                          ......+..++|+|=|+..=...
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~M  239 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRM  239 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGT
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHH
Confidence                11224567789999998765443

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.81  E-value=0.41  Score=39.00  Aligned_cols=84  Identities=11%  Similarity=0.139  Sum_probs=55.2

Q ss_pred             EEEeCccHHHHHHHHhcC-cEEEEEcCCccccHHHHHHhhcCCC-ceeeeEEe-ccCeeee---C------C----ceee
Q 022460          180 FVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVY-RDSCVFA---D------G----EYLK  243 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~-fEIvIfTas~~~YA~~Il~~LDP~~-~~f~~rL~-Rd~C~~~---~------g----~~iK  243 (297)
                      .++++||+.++++++.+. +.++|-|++...+++++++.|.-+. ..+..++- ..+..+.   .      +    ..++
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~  159 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK  159 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence            356899999999999975 9999999999999999999986442 24443332 1111110   0      0    0111


Q ss_pred             eccccCCCCCcEEEEECCCcc
Q 022460          244 DLTILGRDLARIAIVDNTPQV  264 (297)
Q Consensus       244 DLs~Lgrdl~~vVIIDDsp~~  264 (297)
                      -+ +-+.++++++.|=|++.=
T Consensus       160 ~~-~~~~~~~~~~~vGDs~~D  179 (217)
T d1nnla_         160 LL-KEKFHFKKIIMIGDGATD  179 (217)
T ss_dssp             HH-HHHHCCSCEEEEESSHHH
T ss_pred             HH-HhccCccccEEEEeCHhh
Confidence            11 113567889999998743

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=80.80  E-value=0.33  Score=39.98  Aligned_cols=13  Identities=46%  Similarity=0.659  Sum_probs=11.5

Q ss_pred             cEEEEeCCcceee
Q 022460          143 ITLVLDLDETLVH  155 (297)
Q Consensus       143 ~tLVLDLDeTLVh  155 (297)
                      |.+++||||||+.
T Consensus         2 k~if~DlDGTL~~   14 (260)
T d2rbka1           2 KALFFDIDGTLVS   14 (260)
T ss_dssp             CEEEECSBTTTBC
T ss_pred             eEEEEECCCCCcC
Confidence            5789999999995

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.19  E-value=0.27  Score=38.03  Aligned_cols=82  Identities=13%  Similarity=0.116  Sum_probs=56.1

Q ss_pred             EEEeCccHHHHHHHHhcCcEEEEEcCCccccHHHHHHhhcCCCceeeeEEe-ccCeeeeC-----C-ceeeeccccCCCC
Q 022460          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFAD-----G-EYLKDLTILGRDL  252 (297)
Q Consensus       180 ~V~~RP~l~eFL~~ls~~fEIvIfTas~~~YA~~Il~~LDP~~~~f~~rL~-Rd~C~~~~-----g-~~iKDLs~Lgrdl  252 (297)
                      .+...|+...+...+.+.+.+++.|.+....+..+...+.... .+...+. ...+....     + ...+....+|.+.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY  145 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred             hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCch-hhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence            3567899999999999999999999999999999998887765 3443333 33222211     1 1112333457788


Q ss_pred             CcEEEEECCC
Q 022460          253 ARIAIVDNTP  262 (297)
Q Consensus       253 ~~vVIIDDsp  262 (297)
                      ++|+-|=|+.
T Consensus       146 ~eviaiGDg~  155 (206)
T d1rkua_         146 YRVIAAGDSY  155 (206)
T ss_dssp             CEEEEEECSS
T ss_pred             cceEEecCCc
Confidence            8888887765