Citrus Sinensis ID: 022485


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
MASSGRAKRVTDPLNEKVKAQLIGHQLSYVSSGSEYSAAAVDDDSPSLSELVHDFLEHELSQAQPPGYDSDSERVDTVADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFVRTR
cccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccEEEEEEccccccccccccccEEEEEEcccccccccEEEEEcccccccccccccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccEEEcccccccccEEEEEcc
ccHHHHHHHHHcHHHHHHHHHHcccccccccccccccccccccccHcHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEEEEccccccccEEEEEEccHHHHEEEccccHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEEccccccccccEEEcc
massgrakrvtdplNEKVKAQLIGHQLsyvssgseysaaavdddspslSELVHDFLEHelsqaqppgydsdservdtvaDSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNaaicktkwsssggltagnyeyidvvqsdsytstqnryfvdldfaaefeiarptsaytrlsatlprvyvgkgeeLKRIVKVTCDAAkkslkskdltlppwrknrymqnkwfgpykrtvnpipagslspavgpsvsngvkcrcigfddgvngrlfvrtr
massgrakrvtdplnEKVKAQLIGHQLSYVSSGSEYSAAAVDDDSPSLSELVHDFLEHELSqaqppgydsdseRVDTVADSTELIEDIlkstangnvdLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNaaicktkwsssggltaGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIarptsaytrlsatlprvyvgkgeelkRIVKVTcdaakkslkskdltlppwrknrymqnKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRcigfddgvngrlfvrtr
MASSGRAKRVTDPLNEKVKAQLIGHQLSYVSSGSEYSAAAVDDDSPSLSELVHDFLEHELSQAQPPGYDSDSERVDTVADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFVRTR
**********************************************************************************ELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFV***
******A**VTDPLNEKVKA***************************LSELVHDFLEH*********************DSTELIEDILKSTA*G*VDLYRNLLLTHVLKAMEV*********VFRRQVMSLLRELGHNAAICKTKWS***GLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAK*******LTLPPWRKNRYMQNKWFG*******************************GFDDGVNGRLFVR**
***********DPLNEKVKAQLIGHQLSYVS**************PSLSELVHDFLEHELSQA**************VADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFVRTR
*******KRVTD*LNEKVK***************************SLSELVHDFLEH************************ELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYK*********************GVKCRCIGFDDGVNGRL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASSGRAKRVTDPLNEKVKAQLIGHQLSYVSSGSEYSAAAVDDDSPSLSELVHDFLEHELSQAQPPGYDSDSERVDTVADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSRLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFVRTR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
224105055289 predicted protein [Populus trichocarpa] 0.959 0.982 0.647 3e-99
224078569289 predicted protein [Populus trichocarpa] 0.959 0.982 0.633 1e-97
255572634286 conserved hypothetical protein [Ricinus 0.945 0.979 0.614 1e-93
255585630285 conserved hypothetical protein [Ricinus 0.935 0.971 0.597 1e-88
357513291305 hypothetical protein MTR_8g012240 [Medic 0.993 0.963 0.553 5e-84
449475375301 PREDICTED: uncharacterized protein LOC10 0.983 0.966 0.532 8e-84
356560703299 PREDICTED: uncharacterized protein LOC10 0.949 0.939 0.544 6e-79
225469257282 PREDICTED: uncharacterized protein LOC10 0.942 0.989 0.548 7e-78
297829280298 hypothetical protein ARALYDRAFT_478057 [ 0.945 0.939 0.531 8e-78
18397919298 uncharacterized protein [Arabidopsis tha 0.945 0.939 0.524 6e-77
>gi|224105055|ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|222850077|gb|EEE87624.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 195/301 (64%), Positives = 231/301 (76%), Gaps = 17/301 (5%)

Query: 1   MASSGRAKRVTDPLNEKVKAQLIGHQLSYVSSGSEYSAAAVDDDSPSLSELVHDFLEHE- 59
           M+S  R+KRVTDPL++K KA+L+G QLSYVSSGSE+SA   DDD P LSELVH FLE++ 
Sbjct: 1   MSSFVRSKRVTDPLDDKAKARLVGRQLSYVSSGSEHSADD-DDDLPCLSELVHGFLENDD 59

Query: 60  --LSQAQPPGYDSDSERVDTVADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFSR 117
             L+     GY+SDS+RVD+VAD  + +E IL+S   G+ D YRNLL  HV KAME FS 
Sbjct: 60  SDLTDDSVNGYESDSDRVDSVADCKDFVEGILRS---GSRDSYRNLLSAHVSKAMEAFSC 116

Query: 118 LRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGN--YEYIDVVQSDSYTSTQNR 175
           L  Q+ V RR+VMS LRELGHNAAICKTKW SSGG       YE+IDVVQS S T  QNR
Sbjct: 117 LINQRPVLRRKVMSFLRELGHNAAICKTKWESSGGGGLTAGGYEFIDVVQSKSST-LQNR 175

Query: 176 YFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTL 235
           Y VDLDFA++FEIARPTS + +L  +LPRV+VG+ E+LK IVK   DA+K+SLKS++L+L
Sbjct: 176 YVVDLDFASQFEIARPTSQFLKLQHSLPRVFVGRSEDLKTIVKSISDASKRSLKSRELSL 235

Query: 236 PPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNGRLFVRT 295
           PPWRKNRYMQNKWFGPY+RTVNP      SPA  PSV + VKCRC+GFDD VNGRLFVRT
Sbjct: 236 PPWRKNRYMQNKWFGPYRRTVNP------SPATPPSV-DVVKCRCVGFDDAVNGRLFVRT 288

Query: 296 R 296
           R
Sbjct: 289 R 289




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078569|ref|XP_002305559.1| predicted protein [Populus trichocarpa] gi|222848523|gb|EEE86070.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255572634|ref|XP_002527250.1| conserved hypothetical protein [Ricinus communis] gi|223533343|gb|EEF35094.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|255585630|ref|XP_002533502.1| conserved hypothetical protein [Ricinus communis] gi|223526646|gb|EEF28889.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|357513291|ref|XP_003626934.1| hypothetical protein MTR_8g012240 [Medicago truncatula] gi|355520956|gb|AET01410.1| hypothetical protein MTR_8g012240 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449475375|ref|XP_004154430.1| PREDICTED: uncharacterized protein LOC101232147 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356560703|ref|XP_003548628.1| PREDICTED: uncharacterized protein LOC100805677 [Glycine max] Back     alignment and taxonomy information
>gi|225469257|ref|XP_002265575.1| PREDICTED: uncharacterized protein LOC100250319 [Vitis vinifera] gi|296090565|emb|CBI40915.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297829280|ref|XP_002882522.1| hypothetical protein ARALYDRAFT_478057 [Arabidopsis lyrata subsp. lyrata] gi|297328362|gb|EFH58781.1| hypothetical protein ARALYDRAFT_478057 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18397919|ref|NP_566303.1| uncharacterized protein [Arabidopsis thaliana] gi|6041836|gb|AAF02145.1|AC009853_5 unknown protein [Arabidopsis thaliana] gi|15028231|gb|AAK76612.1| unknown protein [Arabidopsis thaliana] gi|21280937|gb|AAM44916.1| unknown protein [Arabidopsis thaliana] gi|332641010|gb|AEE74531.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query296
TAIR|locus:2079691298 AT3G07350 "AT3G07350" [Arabido 0.939 0.932 0.534 2.5e-74
TAIR|locus:2090295281 AT3G25240 "AT3G25240" [Arabido 0.925 0.975 0.5 3.7e-64
TAIR|locus:2008870295 AT1G12030 "AT1G12030" [Arabido 0.770 0.772 0.373 1.9e-37
TAIR|locus:2027134283 AT1G62420 "AT1G62420" [Arabido 0.685 0.717 0.399 2.2e-34
TAIR|locus:2127856287 AT4G32480 "AT4G32480" [Arabido 0.466 0.480 0.467 3e-30
TAIR|locus:2039757291 AT2G39650 "AT2G39650" [Arabido 0.793 0.807 0.329 6.2e-30
TAIR|locus:2130005341 AT4G14620 "AT4G14620" [Arabido 0.817 0.709 0.304 7.1e-29
TAIR|locus:2040389310 AT2G38820 "AT2G38820" [Arabido 0.608 0.580 0.377 1.2e-28
TAIR|locus:2084593370 AT3G22970 "AT3G22970" [Arabido 0.550 0.440 0.377 1.2e-26
TAIR|locus:2046006294 AT2G20670 [Arabidopsis thalian 0.496 0.5 0.393 4e-26
TAIR|locus:2079691 AT3G07350 "AT3G07350" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 164/307 (53%), Positives = 212/307 (69%)

Query:     6 RAKRVTDPLNEKVKAQLIGHQLSYVSSGSEYSAAAV----DDDSPSLSELVHDFLEHELS 61
             RAKRVTDPL E+V+A+L+G   S+ SSGSE++   +    DDDSP LS+LV  FLE E+ 
Sbjct:     5 RAKRVTDPLAEEVRARLVG--CSF-SSGSEHTGDGIEDYEDDDSPCLSDLVQGFLEDEVD 61

Query:    62 QA--------QPPGYDSDSERVDTVADSTELIEDILKSTANG-NVDLYRNLLLTHVLKAM 112
                       Q  G DSDS+    + +  +  +DI K   N    D Y   +L HV +AM
Sbjct:    62 TVDDESCWCDQDSGSDSDSD--SELGELPDFADDIAKLLRNSLREDSYGRTVLVHVARAM 119

Query:   113 EVFSRLR---QQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSY 169
             E+ S L    +Q++VF+R+VMSLLRELGHNAAICKTKW SSGGLTAGN+E+IDVV + S 
Sbjct:   120 EMLSSLGSQPEQRAVFQRKVMSLLRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSA 179

Query:   170 TSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLK 229
             +S   R+ VDLDF++ F+IARPTS Y R+  +LP V+VGKG++LKRI+++ CDAA+ SL+
Sbjct:   180 SSQSVRFIVDLDFSSRFQIARPTSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLR 239

Query:   230 SKDLTLPPWRKNRYMQNKWFGPYKRTVNPIPAGSLSPAVGPSVSNGVKCRCIGFDDGVNG 289
             ++ LTLPPWRKNRYMQ +W GPYKRT N      L+P+   S  + V CR IGFD+ V G
Sbjct:   240 NRGLTLPPWRKNRYMQTRWLGPYKRTTN------LTPST--SGVDTVMCRAIGFDNAVGG 291

Query:   290 RLFVRTR 296
             RLFVRTR
Sbjct:   292 RLFVRTR 298




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2090295 AT3G25240 "AT3G25240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008870 AT1G12030 "AT1G12030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027134 AT1G62420 "AT1G62420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127856 AT4G32480 "AT4G32480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039757 AT2G39650 "AT2G39650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130005 AT4G14620 "AT4G14620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040389 AT2G38820 "AT2G38820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084593 AT3G22970 "AT3G22970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046006 AT2G20670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
pfam04720218 pfam04720, DUF506, Protein of unknown function (DU 2e-83
TIGR01615131 TIGR01615, A_thal_3542, uncharacterized plant-spec 2e-68
>gnl|CDD|218228 pfam04720, DUF506, Protein of unknown function (DUF506) Back     alignment and domain information
 Score =  250 bits (639), Expect = 2e-83
 Identities = 104/220 (47%), Positives = 135/220 (61%), Gaps = 15/220 (6%)

Query: 48  LSELVHDFLEHELSQAQPP-----GYDSDSERVDTVADSTEL------IEDILKSTANGN 96
           LS++V  FLE      +       G DS  E  +  + S +       ++ +L+ T    
Sbjct: 1   LSDMVQGFLEDGNETVEDESFSGSGDDSSDEEDEEDSSSEDNGDVSDELKSLLECTLYR- 59

Query: 97  VDLYRNLLLTHVLKAMEVFS--RLRQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLT 154
            + YR  L   V +A+E  S       +S  RR+VMSLLRELG++AAICK+KW SSG + 
Sbjct: 60  -ERYRRSLEAKVARAVEEASKHVSSGNRSCLRRKVMSLLRELGYDAAICKSKWESSGKVP 118

Query: 155 AGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATLPRVYVGKGEELK 214
           AG YEYIDVV        + R  VDLDF +EFEIARPT  Y R+  +LPRV+VGK E LK
Sbjct: 119 AGEYEYIDVVDGGESKKQEVRLIVDLDFRSEFEIARPTEEYKRILQSLPRVFVGKVERLK 178

Query: 215 RIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKR 254
           ++V++ CDAAK+SLK K + LPPWR+N YMQ KWFGPYKR
Sbjct: 179 QLVRIMCDAAKRSLKKKGMHLPPWRRNEYMQAKWFGPYKR 218


Family of uncharacterized plant proteins. Length = 218

>gnl|CDD|233493 TIGR01615, A_thal_3542, uncharacterized plant-specific domain TIGR01615 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 296
PF04720218 DUF506: Protein of unknown function (DUF506) ; Int 100.0
TIGR01615131 A_thal_3542 uncharacterized plant-specific domain 100.0
PF00797240 Acetyltransf_2: N-acetyltransferase; InterPro: IPR 94.17
PRK15047281 N-hydroxyarylamine O-acetyltransferase; Provisiona 91.62
>PF04720 DUF506: Protein of unknown function (DUF506) ; InterPro: IPR006502 This family of uncharacterised plant proteins are defined by a region found toward the C terminus Back     alignment and domain information
Probab=100.00  E-value=2.4e-70  Score=496.65  Aligned_cols=205  Identities=49%  Similarity=0.814  Sum_probs=178.3

Q ss_pred             HHHHHHHHHhcCcC-----CCCCCCCCCCc---c---ccccchhhHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHHHHh
Q 022485           48 LSELVHDFLEHELS-----QAQPPGYDSDS---E---RVDTVADSTELIEDILKSTANGNVDLYRNLLLTHVLKAMEVFS  116 (296)
Q Consensus        48 La~mV~~FlE~~~~-----~~~~~~~~sd~---~---~~~~~~~~~~~~~~lL~~~~~~~~~~~e~~Lla~v~~a~e~~~  116 (296)
                      |++||++|||++++     ..+++++++++   +   ......++++++++||.+...  .+..++.|+++|.++++...
T Consensus         1 Ls~mV~~FlE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~e~l~~Ll~~~~~--~e~~~~~l~~~v~~~v~~~~   78 (218)
T PF04720_consen    1 LSDMVQGFLEEEESSAPSFSFSGNGDDSSDEDSDSDSGSSESAEFWEELQELLQCISE--RESSRRRLLADVRRAVEEAK   78 (218)
T ss_pred             CHHHHHHHhccCCcccccccccccCCCCccccccccCcccchHHHHHHHHHHHhcccc--ccchHHHHHHHHHHHHHHHH
Confidence            78999999999865     11111111111   1   222345678888888887655  56668889999999999886


Q ss_pred             hh--hcchhhHHHHHHHHHHhcCCcceEeeecCCCCCCCCCCccceEEEEecCCCCCCcceEEEecccccceeeccCChH
Q 022485          117 RL--RQQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAEFEIARPTSA  194 (296)
Q Consensus       117 ~~--~~~~~~~rr~v~~~Lr~~GydAaiCkS~W~~s~~~paG~heyIdV~~~~~~~~~~~r~IVD~dFr~qFeIArpT~~  194 (296)
                      ..  .++++|+|+.||++||.+||||+||||+|++++++|+|+||||||++.+.+.++.+|||||||||+||||||||++
T Consensus        79 ~~~~~~~~~~~rr~v~~~Lr~~GydAaiCkS~W~~s~~~p~g~yeyIdV~~~~~~~~~~~r~IVd~~fr~~FeiArpt~~  158 (218)
T PF04720_consen   79 DEIKRGCRSCLRRSVMSRLRALGYDAAICKSRWESSGGIPAGEYEYIDVIVSGSSSGKSERYIVDPDFRSQFEIARPTPE  158 (218)
T ss_pred             hhhcccchHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCcceeEEEEEECCCCCCcceeEEEecchHhCeeecCCCHH
Confidence            43  2479999999999999999999999999999999999999999999987667788999999999999999999999


Q ss_pred             HHHHHhhCCCceeeChhhHHHHHHHHHHHHHHhHHhCCCCCCCCCchhhHhhhhcCCCcc
Q 022485          195 YTRLSATLPRVYVGKGEELKRIVKVTCDAAKKSLKSKDLTLPPWRKNRYMQNKWFGPYKR  254 (296)
Q Consensus       195 Y~~ll~~lP~vFVG~~~rL~~iV~~mc~A~k~S~k~~Gm~lPPWRk~~ym~aKWl~~~~R  254 (296)
                      |++||+.||.||||+.++|++||++||+|||+|||++|||||||||++|||+|||+||+|
T Consensus       159 Y~~ll~~lP~vfVG~~~~L~~iV~~~c~a~k~s~k~~g~~lPPWR~~~ym~aKW~~~y~R  218 (218)
T PF04720_consen  159 YAALLAALPEVFVGTPERLKQIVRLMCDAAKRSFKERGMHLPPWRKNSYMQAKWLSPYKR  218 (218)
T ss_pred             HHHHHHhCCCceEcCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCchHHHHHhccCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999998



This region is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence.

>TIGR01615 A_thal_3542 uncharacterized plant-specific domain TIGR01615 Back     alignment and domain information
>PF00797 Acetyltransf_2: N-acetyltransferase; InterPro: IPR001447 Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30 kDa Back     alignment and domain information
>PRK15047 N-hydroxyarylamine O-acetyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query296
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 47/182 (25%)

Query: 53  HDFLEHELSQAQPPGYD--SDSERVDTVAD-STELIEDILKST-ANGNVDLYRNLLLTHV 108
           H  ++ E  + Q    D  S  E    V +   + ++D+ KS  +   +D        H+
Sbjct: 4   HHHMDFETGEHQYQYKDILSVFED-AFVDNFDCKDVQDMPKSILSKEEID--------HI 54

Query: 109 LKAMEVFSRLR--------QQKSVFRRQVMSLLRELGHNAAICKTKWSSSGGLTAGNYEY 160
           + + +  S           +Q+ + ++ V  +LR    N     +             E 
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI---NYKFLMSPIK---------TEQ 102

Query: 161 ID-VVQSDSYTSTQNRYFVDLDFAAEFEIARPTSAYTRLSATL----PRVYV-------- 207
               + +  Y   ++R + D    A++ ++R    Y +L   L    P   V        
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL-QPYLKLRQALLELRPAKNVLIDGVLGS 161

Query: 208 GK 209
           GK
Sbjct: 162 GK 163


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
1e2t_A284 NAT, N-hydroxyarylamine O-acetyltransferase; acety 92.86
1w4t_A299 Arylamine N-acetyltransferase; 5- aminosalicylic a 91.91
2bsz_A278 Arylamine N-acetyltransferase 1; acyltransferase, 91.7
2vfb_A280 Arylamine N-acetyltransferase; NAT, acetyl COA, my 90.26
1w5r_A278 Arylamine N-acetyltransferase; acyltransferase; 1. 90.06
3lnb_A309 N-acetyltransferase family protein; arylamine N-ac 89.33
3d9w_A293 Putative acetyltransferase; arylamine N-acetyltran 88.35
2ija_A295 Arylamine N-acetyltransferase 1; arylamide acetyla 84.77
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5 Back     alignment and structure
Probab=92.86  E-value=0.21  Score=45.83  Aligned_cols=58  Identities=17%  Similarity=0.267  Sum_probs=45.7

Q ss_pred             hhhH--HHHHHHHHHhcCCcceEeeec--CCCCCCCCCCccceEEEEecCCCCCCcceEEEecccccc
Q 022485          122 KSVF--RRQVMSLLRELGHNAAICKTK--WSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAAE  185 (296)
Q Consensus       122 ~~~~--rr~v~~~Lr~~GydAaiCkS~--W~~s~~~paG~heyIdV~~~~~~~~~~~r~IVD~dFr~q  185 (296)
                      +-|+  -..+...|+++||++..+..+  |...+..++..|-.|.|.+.      +.+||||+.|=+.
T Consensus        70 GyC~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~H~~l~V~id------g~~ylvDVGFG~~  131 (284)
T 1e2t_A           70 GYCFELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVE------DEQWIADVGFGGQ  131 (284)
T ss_dssp             BCHHHHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEET------TEEEEECSCSCTT
T ss_pred             EEhHHHHHHHHHHHHHCCCeEEEEEEEEecCCCCCCCCCccEEEEEEEC------CceEEEecCCCcc
Confidence            4453  446688999999999998876  65555556789999999986      6799999999763



>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5 Back     alignment and structure
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5 Back     alignment and structure
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A* Back     alignment and structure
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A Back     alignment and structure
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis} Back     alignment and structure
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica} Back     alignment and structure
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query296
d1e2ta_274 Arylamine N-acetyltransferase {Salmonella typhimur 93.88
d1w5ra1273 Arylamine N-acetyltransferase {Mycobacterium smegm 90.92
d1w4ta1277 Arylamine N-acetyltransferase {Pseudomonas aerugin 90.87
d2bsza1270 Arylamine N-acetyltransferase {Rhizobium loti [Tax 90.85
>d1e2ta_ d.3.1.5 (A:) Arylamine N-acetyltransferase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Salmonella typhimurium [TaxId: 90371]
Probab=93.88  E-value=0.055  Score=47.25  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=44.9

Q ss_pred             hhhH--HHHHHHHHHhcCCcceEeeec--CCCCCCCCCCccceEEEEecCCCCCCcceEEEeccccc
Q 022485          122 KSVF--RRQVMSLLRELGHNAAICKTK--WSSSGGLTAGNYEYIDVVQSDSYTSTQNRYFVDLDFAA  184 (296)
Q Consensus       122 ~~~~--rr~v~~~Lr~~GydAaiCkS~--W~~s~~~paG~heyIdV~~~~~~~~~~~r~IVD~dFr~  184 (296)
                      +-|+  -..+...|+++||++.+...+  |...+..|.+.|--+.|.++      +.+|+||+.|-+
T Consensus        68 GyC~ElN~lf~~lL~~LGF~v~~~~arV~~~~~~~~~~~~H~~l~V~i~------~~~yLvDvGfG~  128 (274)
T d1e2ta_          68 GYCFELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVE------DEQWIADVGFGG  128 (274)
T ss_dssp             BCHHHHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEET------TEEEEECSCSCT
T ss_pred             ccchhhHHHHHHHHHHcCCceEEEEEEEecCCCCCCCCCceEEEEEEEC------CeeEEEeccCCC
Confidence            4453  456789999999999888766  54555567789999999986      689999999953



>d1w5ra1 d.3.1.5 (A:3-275) Arylamine N-acetyltransferase {Mycobacterium smegmatis [TaxId: 1772]} Back     information, alignment and structure
>d1w4ta1 d.3.1.5 (A:1-277) Arylamine N-acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]} Back     information, alignment and structure