Citrus Sinensis ID: 022512

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290------
Protein Sequence
MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNEDVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccEEEEEEEEcccccccEEEEEEcccccccEEccccHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEEEEcccccccEEEEEEccHHHHEEEccccHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEHHHHHcccccccccEEEEEEc
Coil and Loop (DISEMBL)
maknpvsqpySEEIARFLEGTANFSDIVFGFmeessestvgnlcdckeddnedvEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLagskcscrtpvaggcrtCMRKEISVRLQNVGYncvickskwkssseipagnhTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNrlpevfvgKTERLKAVIKIMCAAAKKCMKEkkmhiapwrkHKYMQAKwlggyqrptaettplimmpvvsyayadrqpkpkaAASMLTFDLMEnfgglhcgaTAAVEVL
Flexible Loop (DISEMBL)
maknpvsqpYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNEDVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIklagskcscrtpvagGCRTCMRKEISVRLQNVGYNCVICKskwkssseipagNHTYLEvvekskkgdvIRVVIELNFRAEFEMARASEEYNrlvnrlpevfvgkterLKAVIKIMCAAAKKCMKekkmhiapwrkHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL
Low Complexity Region (SEG)
MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLcdckeddnedveenkAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLkavikimcaaakkcmkekkmhiaPWRKHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL
Disordered region (IsUnstruct)
*************IARFLEGTANFSDIVFGFME******VGNLCDC***********KAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADR*****AAASMLTFDLMENFGGLHCGATAA****
Disordered Region (DISOPRED)
*************************DIVFGFMEE**************************WEAQEKLLQATI****SFESKLRQAVKYSLEEIKLAGSKCSC********RTCMRKEISVRLQNVGYNCVIC************GNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAK*********IAPWRKHKYMQAKWLG*********************************SMLTFDLMENFGGLHCGATAAVEVL
Disordered Region (DISEMBL)
*********YSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNEDVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL
Disordered Region (DISPRO)
**********************NFSDI***FMEE*********************ENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQ****************************AASMLTFDLMENFGGLHCGATAAVEVL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLxxxxxxxxxxxxxxxxxxxxxxxxxxxxIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
224121736	296	predicted protein [Populus trichocarpa]	0.952	0.952	0.562	2e-86
255553727	292	conserved hypothetical protein [Ricinus	0.956	0.969	0.567	6e-86
449438498	289	PREDICTED: uncharacterized protein LOC10	0.959	0.982	0.536	1e-85
224079209	306	predicted protein [Populus trichocarpa]	0.898	0.869	0.532	7e-79
388490978	298	unknown [Lotus japonicus]	0.878	0.872	0.568	4e-78
224127061	298	predicted protein [Populus trichocarpa]	0.952	0.946	0.532	6e-78
225446382	303	PREDICTED: uncharacterized protein LOC10	0.952	0.930	0.532	2e-76
297802772	287	hypothetical protein ARALYDRAFT_913200 [	0.922	0.951	0.542	2e-76
147814960	303	hypothetical protein VITISV_006560 [Viti	0.952	0.930	0.529	7e-76
225468409	309	PREDICTED: uncharacterized protein LOC10	0.871	0.834	0.527	1e-75

>gi|224121736|ref|XP_002330640.1| predicted protein [Populus trichocarpa] gi|222872244|gb|EEF09375.1| predicted protein [Populus trichocarpa]

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/306 (56%), Positives = 214/306 (69%), Gaps = 24/306 (7%)

Query: 1   MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNED------- 53
           +A+ P++    EE   F +  A F+DIVFGF+EE   S  G+     E + ED       
Sbjct: 5   IARLPLNYRSFEENVGFSDDPAYFTDIVFGFLEEQEVSPDGSCASGGEYNEEDEDEISPC 64

Query: 54  -VEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRT 112
            VEENK FW+ Q +LLQAT+ R SS E+K+RQA K +L+EI + G  C C   VAG CR 
Sbjct: 65  NVEENKKFWDEQNQLLQATLYRTSSLEAKIRQATKDTLKEIDVVGMHCLCGKLVAGDCRD 124

Query: 113 CMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEK--SKKGDVIRVVIELNF 170
           C+++EIS+RLQN GYNC ICKSKWK S EIP+G HT+LEVV K  SKKG+V RVVIELNF
Sbjct: 125 CLQREISIRLQNEGYNCAICKSKWKRSEEIPSGEHTFLEVVGKLSSKKGEV-RVVIELNF 183

Query: 171 RAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHK 230
           RAEFEMA+A++EYN+L++RLPEVFVGK ERL A+IKI+C+AAKKCMKEKKMH+ PWRKHK
Sbjct: 184 RAEFEMAKANQEYNQLISRLPEVFVGKAERLTALIKILCSAAKKCMKEKKMHLGPWRKHK 243

Query: 231 YMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGAT 290
           YMQ+KW+   +R T    P          ++DR  KP+  ASMLT+DL+E    LHC   
Sbjct: 244 YMQSKWIATCERTTPAPLP--------GGFSDRTAKPR--ASMLTYDLLETLPVLHC--- 290

Query: 291 AAVEVL 296
            AVEVL
Sbjct: 291 TAVEVL 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553727|ref|XP_002517904.1| conserved hypothetical protein [Ricinus communis] gi|223542886|gb|EEF44422.1| conserved hypothetical protein [Ricinus communis]

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 173/305 (56%), Positives = 220/305 (72%), Gaps = 22/305 (7%)

Query: 1   MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKE-------DDNED 53
           MA   +S+  S++   F +   +F+DIVFGF+EE  ES   + CD  +       D +  
Sbjct: 1   MAGKQLSRWDSDQFFGFSDQAGSFADIVFGFLEEQEESPKSS-CDSNDYLEDDEDDSSSS 59

Query: 54  VEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTC 113
           VEEN+ FWE QE+LLQAT+ R SS E K+RQA K ++ EIK  G +C C  P  G CR  
Sbjct: 60  VEENRKFWETQEELLQATLYRTSSLEMKIRQATKDAVREIKQLGLRCPCHEPATGQCRNF 119

Query: 114 MRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEK--SKKGDVIRVVIELNFR 171
           +++EIS+RLQ  GYNC ICKSKWKSS +IP+G HT+LEVVEK  SKKG+V RVVIELNFR
Sbjct: 120 LQREISLRLQAEGYNCAICKSKWKSSHDIPSGEHTFLEVVEKLNSKKGEV-RVVIELNFR 178

Query: 172 AEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKY 231
            EFEMARAS+EYN+L+NRLPE+FVGK ERLKA++K++C+AAKKCMKEKKMH+ PWRKHKY
Sbjct: 179 GEFEMARASQEYNQLINRLPEMFVGKAERLKALLKVLCSAAKKCMKEKKMHLGPWRKHKY 238

Query: 232 MQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATA 291
           MQ+KWLG  +R T+   PL   PV    ++DR  KP+  ASMLT+D+++N   LHC    
Sbjct: 239 MQSKWLGTCERTTSAMDPL---PV---GFSDRPTKPR--ASMLTYDMLQNLPVLHC---T 287

Query: 292 AVEVL 296
           AV+VL
Sbjct: 288 AVKVL 292

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438498|ref|XP_004137025.1| PREDICTED: uncharacterized protein LOC101216632 [Cucumis sativus]

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/298 (53%), Positives = 215/298 (72%), Gaps = 14/298 (4%)

Query: 1   MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNE---DVEEN 57
           M K PV+ P S E + F  GTA+FSD+ F ++E+   S+ G+ C+  ++D +   D++E+
Sbjct: 1   MVKIPVNVPTSAEDSDFTCGTASFSDVFFRYLEDGETSSSGSFCNSDDEDEQNSFDLKES 60

Query: 58  KAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKE 117
           KAFW +Q++LLQ T+ R +S ES+LR+A    L EI +  + C C T  +G CR C ++E
Sbjct: 61  KAFWNSQDELLQTTLRRTTSVESRLRRATAMILREISMESTICECGTSPSGSCRNCWQRE 120

Query: 118 ISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFE 175
           I  RL+  G NC +CKSKW+SSS+IP+G H+YLEV++ S  ++G+V RVVIELNFRAEFE
Sbjct: 121 ICNRLRITGLNCAVCKSKWRSSSDIPSGEHSYLEVLDNSNSRRGEV-RVVIELNFRAEFE 179

Query: 176 MARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAK 235
           MARA+EEYN+L+ RLPEVFVGK ERL ++IKI+C AAK+C KEKKMH+APWRK KYMQ+K
Sbjct: 180 MARANEEYNKLIRRLPEVFVGKEERLWSLIKILCTAAKRCTKEKKMHLAPWRKQKYMQSK 239

Query: 236 WLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAV 293
           W+G  +R  A T PL   PV   ++ +R  K K  ASMLTFDL++N GGLHC A   V
Sbjct: 240 WVGRRERERAATVPL---PV---SFRERPAKSK--ASMLTFDLVDNLGGLHCTAVEVV 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079209|ref|XP_002305794.1| predicted protein [Populus trichocarpa] gi|222848758|gb|EEE86305.1| predicted protein [Populus trichocarpa]

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 154/289 (53%), Positives = 202/289 (69%), Gaps = 23/289 (7%)

Query: 19  EGTANFSDIVFGFMEESS------------ESTVGNLCDCKEDDNEDVEENKAFWEAQEK 66
           E  A+ SD+VFGF+E+              E+ +  L D  E++N +VEE+K+FWE Q +
Sbjct: 27  EPAASLSDMVFGFLEDGDWSSGSSGSEGCHENEMLELEDEGEENNGNVEEDKSFWENQHQ 86

Query: 67  LLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVG 126
           LL AT+ R SS ES++R   K +L+EI++AG+ C C  P+A  CR+C+  E+S RL+N G
Sbjct: 87  LLHATLFRTSSLESRIRSISKEALKEIQMAGTICGCGRPMAASCRSCLMAEVSSRLRNAG 146

Query: 127 YNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFEMARASEEYN 184
           YN  ICK+KW+SS  IP+G HT+++V++ S  K+G+V RV+IELNFRAEFEMA+ASEEYN
Sbjct: 147 YNSAICKTKWRSSPGIPSGEHTFMDVIDNSSSKRGEV-RVIIELNFRAEFEMAKASEEYN 205

Query: 185 RLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPT 244
           +LV+RLPEVFVGK ERL +V+KI+C AAKKCMKEKKMH+ PWRK +YMQAKWL    R T
Sbjct: 206 QLVHRLPEVFVGKVERLNSVVKILCLAAKKCMKEKKMHLGPWRKQRYMQAKWL----RTT 261

Query: 245 AETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAV 293
            E +    MP  S   + R P+PK  ASMLT DL E    +HC A A V
Sbjct: 262 CERS--TSMPPFSMGSSGRLPRPK--ASMLTVDLKEMLPDVHCTAVAVV 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490978|gb|AFK33555.1| unknown [Lotus japonicus]

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/292 (56%), Positives = 203/292 (69%), Gaps = 32/292 (10%)

Query: 23  NFSDIVFGFMEE---------SSESTVGNLCDCKEDDNED-----VEENKAFWEAQEKLL 68
           +F+D VFGF E+         SS+S+   L     D+ ED     +E+NKAFWE QE+LL
Sbjct: 21  SFADTVFGFWEDAHVLVPPGNSSDSSNDELD--YNDEEEDGSFCNLEKNKAFWEEQEQLL 78

Query: 69  QATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAG-GCRTCMRKEISVRLQNVGY 127
           +AT+ R SS E K+RQAVK +L E+  +   C CR PVA   CR C+R+E+  RL N+GY
Sbjct: 79  KATLCRTSSREMKIRQAVKEALGELNTSELLCFCRRPVATRSCRDCLRREMCDRLLNLGY 138

Query: 128 NCVICKSKWKSSSEIPAGNHTYLEVVEKSK--KGDVIRVVIELNFRAEFEMARASEEYNR 185
           NCVICKSKW+SSSEIP+G HTYLEV E S   K  V++VVIELNFRAEFEMARA+EEY +
Sbjct: 139 NCVICKSKWRSSSEIPSGEHTYLEVTENSSNAKRGVVKVVIELNFRAEFEMARANEEYFQ 198

Query: 186 LVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGG-YQRPT 244
           L  +LPEVFVGK+ERL+AV+KIMC+AAKKCMKEKKMH+APWRK KYMQAKWLG    R  
Sbjct: 199 LATKLPEVFVGKSERLRAVVKIMCSAAKKCMKEKKMHLAPWRKQKYMQAKWLGTCLDRSI 258

Query: 245 AETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL 296
            E  P++           R  +PK  ASMLT DL++N  GLHC    AVEV+
Sbjct: 259 VEPLPMV--------DTTRGARPK--ASMLTCDLLDNISGLHC--RNAVEVV 298

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127061|ref|XP_002329377.1| predicted protein [Populus trichocarpa] gi|222870427|gb|EEF07558.1| predicted protein [Populus trichocarpa]

 Score =  296 bits (759), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 164/308 (53%), Positives = 210/308 (68%), Gaps = 26/308 (8%)

Query: 1   MAKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTVGNLCDCKEDDNE-------- 52
           +A+ P++    EE   F +  A F+DIVFG  EE  E +  +LC   + + +        
Sbjct: 5   IARIPLNYRGFEEDVGFSDDPAYFTDIVFGSWEEQ-EVSHESLCTSGDYNEDDGDDDEIS 63

Query: 53  --DVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGC 110
             +VEEN  FWE Q +LLQ T+ R SS E+K+RQA K +++EI   G  C C  P+ G C
Sbjct: 64  PCNVEENNKFWETQLQLLQGTLYRTSSLETKIRQATKEAMKEIDGVGMYCLCGKPMPGAC 123

Query: 111 RTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEK--SKKGDVIRVVIEL 168
           R C+++EIS+RLQN GYNC IC+SKWK S EIP+G HT+LEVV+K  SKKG+  RVVIEL
Sbjct: 124 RNCLQREISIRLQNQGYNCAICESKWKRSEEIPSGEHTFLEVVDKLNSKKGEA-RVVIEL 182

Query: 169 NFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRK 228
           NFRAEFEMA+A++EY +L+NRLPEV+VGKTERLKA+IKI+C+AAK+CMKEKKMH+ PWRK
Sbjct: 183 NFRAEFEMAKANQEYKQLINRLPEVYVGKTERLKALIKILCSAAKECMKEKKMHLGPWRK 242

Query: 229 HKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCG 288
            KYMQ+KW G  +R    TTP    P     ++DR PK +  ASMLT DL E     HC 
Sbjct: 243 LKYMQSKWAGTCER----TTP---APYFPGGFSDRPPKSR--ASMLTCDLSEALPVWHC- 292

Query: 289 ATAAVEVL 296
              AV+VL
Sbjct: 293 --TAVQVL 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446382|ref|XP_002274226.1| PREDICTED: uncharacterized protein LOC100248895 [Vitis vinifera] gi|302143301|emb|CBI21862.3| unnamed protein product [Vitis vinifera]

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 164/308 (53%), Positives = 205/308 (66%), Gaps = 26/308 (8%)

Query: 2   AKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTV---------GNLCDCKEDDNE 52
           A+ PV+   S++  +F   + +  D+VFGF+ E S  +          G  C    D  E
Sbjct: 6   ARLPVTPWSSDDTLKFSGDSESLGDMVFGFLGEDSSGSSCNSGGGWVHGEDCGDGADGEE 65

Query: 53  ---DVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGG 109
              +VE +KAFWE Q++L+QA + R SS ESK+RQ  K +L E+KL  + C CR  VAG 
Sbjct: 66  GFDNVEGSKAFWEEQDQLVQAILCRTSSIESKIRQVTKEALRELKLKETYCVCRRRVAGV 125

Query: 110 CRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIE 167
           C+ C  KE+  +LQ  GYN  ICKSKWKSS +IP+G H+Y+EVV++S  KKG+V RVVIE
Sbjct: 126 CQNCAEKEVWGQLQTAGYNSAICKSKWKSSPDIPSGEHSYMEVVDRSSAKKGEV-RVVIE 184

Query: 168 LNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWR 227
           LNFRAEFEMARAS EYN LV+RLPEVFVGK+ERLKA+IKI+C AAKKCMKEKKMH+ PWR
Sbjct: 185 LNFRAEFEMARASAEYNLLVSRLPEVFVGKSERLKALIKILCHAAKKCMKEKKMHMGPWR 244

Query: 228 KHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENF--GGL 285
           KHKYMQAKW G  +R    T P  M PV    +  R P+ +   SMLTFDL+EN    GL
Sbjct: 245 KHKYMQAKWFGTCER----TAPAPMSPV---DFPGRLPRQR--VSMLTFDLLENLPAAGL 295

Query: 286 HCGATAAV 293
           +  A   V
Sbjct: 296 NFKAVEVV 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802772|ref|XP_002869270.1| hypothetical protein ARALYDRAFT_913200 [Arabidopsis lyrata subsp. lyrata] gi|297315106|gb|EFH45529.1| hypothetical protein ARALYDRAFT_913200 [Arabidopsis lyrata subsp. lyrata]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/295 (54%), Positives = 200/295 (67%), Gaps = 22/295 (7%)

Query: 11  SEEIARFLEGTANFSDIVFGFMEESSESTVG-NLC--DCKEDDNE----DVEENKAFWEA 63
           S++I +FL+G A+  D++FGF++E + S    N    D  E DNE    + EEN+ FW+ 
Sbjct: 6   SDDIMKFLDGMASSDDVLFGFLDEGNHSPEDYNFAAGDESEVDNETTDCNSEENRKFWQE 65

Query: 64  QEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQ 123
           QE+LLQAT+ R SS E+K+RQA K +L+ +K  G  C CR PV  GCR+C+R E+S RL+
Sbjct: 66  QEQLLQATLYRTSSIETKIRQATKEALKVVKSKGLVCVCRRPVTDGCRSCLRGEVSRRLR 125

Query: 124 NVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFEMARASE 181
             GY+C I KSKW+SS EIPAG H YLEVV+KS  KKG+ IRVVIEL FRAEFEMAR S+
Sbjct: 126 EAGYDCAISKSKWRSSHEIPAGEHEYLEVVDKSVSKKGE-IRVVIELCFRAEFEMARGSD 184

Query: 182 EYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQ 241
           EY RL+  LPEV+VGKTERLK++IKI+C AAKKCMK+KKMH+ PWRKHKYMQAKWLG  +
Sbjct: 185 EYKRLIGMLPEVYVGKTERLKSLIKILCTAAKKCMKDKKMHMGPWRKHKYMQAKWLGTCE 244

Query: 242 RPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAVEVL 296
           R +   +P      VS    D  P  K   SML   L     G   G   AV V+
Sbjct: 245 RKS--VSP------VSETEEDMFPVAKQRVSMLNNGLF----GTGMGRPTAVAVV 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147814960|emb|CAN65796.1| hypothetical protein VITISV_006560 [Vitis vinifera]

 Score =  290 bits (741), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 163/308 (52%), Positives = 204/308 (66%), Gaps = 26/308 (8%)

Query: 2   AKNPVSQPYSEEIARFLEGTANFSDIVFGFMEESSESTV---------GNLCDCKEDDNE 52
           A+ PV+   S++  +F   + +  D+VFGF+ E S  +          G  C    D  E
Sbjct: 6   ARLPVTPWSSDDTLKFSGDSESLGDMVFGFLGEDSSGSSCNSGGGWVHGEDCGDGADGEE 65

Query: 53  ---DVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGG 109
              +VE +KAFWE Q++L+QA + R SS ESK+RQ  K +L E+KL  + C CR  VAG 
Sbjct: 66  GFDNVEGSKAFWEEQDQLVQAILCRTSSIESKIRQVTKEALRELKLKETYCVCRRRVAGV 125

Query: 110 CRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIE 167
           C+ C  KE+  +LQ  GYN  ICKSKWKSS +IP+G H+Y+EVV++S  KKG+V RVVIE
Sbjct: 126 CQNCAEKEVWGQLQTAGYNSAICKSKWKSSPDIPSGKHSYMEVVDRSSAKKGEV-RVVIE 184

Query: 168 LNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWR 227
           LNFRAEFEMARAS EYN LV+RLPEVF GK+ERLKA+IKI+C AAKKCMKEKKMH+ PWR
Sbjct: 185 LNFRAEFEMARASAEYNLLVSRLPEVFXGKSERLKALIKILCHAAKKCMKEKKMHMGPWR 244

Query: 228 KHKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENF--GGL 285
           KHKYMQAKW G  +R    T P  M PV    +  R P+ +   SMLTFDL+EN    GL
Sbjct: 245 KHKYMQAKWFGTCER----TAPAPMSPV---DFPGRLPRQR--VSMLTFDLLENLPAAGL 295

Query: 286 HCGATAAV 293
           +  A   V
Sbjct: 296 NFKAVEVV 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468409|ref|XP_002263191.1| PREDICTED: uncharacterized protein LOC100261530 [Vitis vinifera]

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 194/294 (65%), Gaps = 36/294 (12%)

Query: 22  ANFSDIVFGFME------ESSESTVGNLCDCKED--------------DNEDVEENKAFW 61
           A+ SD+ FGF+E      ES  ST G    C E+              ++  VEENK FW
Sbjct: 30  ASLSDMAFGFLEDGEGWPESFSSTGG----CSENGALDDDEDDADKEKNSSSVEENKNFW 85

Query: 62  EAQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVR 121
           E+Q ++L  T+ R SS E  +R A K +L+EI++  + C C  PV GGCR+C+ +E+S R
Sbjct: 86  ESQHQILHTTLCRTSSLELGIRNATKEALKEIQMDDNVCVCLRPVVGGCRSCLLREVSDR 145

Query: 122 LQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFEMARA 179
           L+N GYN  ICKSKW+SS  IP+G HT+L+VV  S  KKG+V RV+IELNFRAEFEMARA
Sbjct: 146 LRNAGYNSAICKSKWRSSPNIPSGEHTFLDVVHNSSAKKGEV-RVIIELNFRAEFEMARA 204

Query: 180 SEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGG 239
           SEEYNRL+ RLPEVFVGK ERL  ++KI+C AAKKCMKEKKMH+ PWRKH+YMQAKWL  
Sbjct: 205 SEEYNRLIRRLPEVFVGKVERLHTLVKILCMAAKKCMKEKKMHMGPWRKHRYMQAKWLST 264

Query: 240 YQRPTAETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCGATAAV 293
             R T+ ++       +    + R PKPK  ASMLT DLME    +HC A   V
Sbjct: 265 CVRSTSTSS-------LLSGDSGRLPKPK--ASMLTVDLMEKLPNMHCTAVEVV 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	296
TAIR|locus:2046006	294	AT2G20670 [Arabidopsis thalian	0.929	0.935	0.442	2e-56
TAIR|locus:2127856	287	AT4G32480 "AT4G32480" [Arabido	0.820	0.846	0.484	1.1e-55
TAIR|locus:2079691	298	AT3G07350 "AT3G07350" [Arabido	0.466	0.463	0.357	1e-22
TAIR|locus:2130005	341	AT4G14620 "AT4G14620" [Arabido	0.449	0.390	0.355	7e-22
TAIR|locus:2090295	281	AT3G25240 "AT3G25240" [Arabido	0.510	0.537	0.329	1.3e-20
TAIR|locus:2084593	370	AT3G22970 "AT3G22970" [Arabido	0.418	0.335	0.356	3.2e-19
TAIR|locus:2040389	310	AT2G38820 "AT2G38820" [Arabido	0.496	0.474	0.303	5.1e-19
TAIR|locus:2039757	291	AT2G39650 "AT2G39650" [Arabido	0.459	0.467	0.268	3.2e-17
TAIR|locus:2008870	295	AT1G12030 "AT1G12030" [Arabido	0.432	0.433	0.325	6.7e-17
TAIR|locus:2096946	288	AT3G54550 "AT3G54550" [Arabido	0.425	0.437	0.338	1.4e-16

TAIR|locus:2046006 AT2G20670 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 131/296 (44%), Positives = 177/296 (59%)

Query:    11 SEEIARFLEGTANFSDIVFGFMEESSES--------TVGNLXXXXXXXXXXXXXXXAFWE 62
             S++I RFL+G A+  D++FGF++E ++S          G                 AFW+
Sbjct:     6 SDDIMRFLDGMASSDDVLFGFLDEGNQSPEDFSVNLNAGEDDGDEDDNNNNSEDNKAFWQ 65

Query:    63 AQEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRL 122
               E+LLQ T+ R SS E+K+RQA K +L+++K  G  C CR PV GGCR+C+R EIS  L
Sbjct:    66 EHEQLLQGTLYRTSSIETKIRQATKEALKQVKSKGLYCVCRRPVDGGCRSCLRGEISRHL 125

Query:   123 QNV-GYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFEMARA 179
             ++V GY+CVI KSKW+S  +IPAG H ++E+V++S  KK ++ RVVIEL+FRAEFE+A+ 
Sbjct:   126 RDVAGYDCVISKSKWRSCQDIPAGEHEFIEIVDRSGSKKSEM-RVVIELSFRAEFEIAKG 184

Query:   180 SEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKYMQAKWLGG 239
             SEEY RL++RLPEV+VGKTERL                       PWRKHKYMQAKWLG 
Sbjct:   185 SEEYKRLISRLPEVYVGKTERLRSLIKILCIAGKKCLRDKKMHMAPWRKHKYMQAKWLGT 244

Query:   240 YQRPTA-ETTPLIMMPVVSYAYADRQPKPKAAASMLTFDLMENFGGLHCG-ATAAV 293
               R ++ E +    M   ++      P  K   SML +D +   GG   G AT AV
Sbjct:   245 CDRSSSLEASVSEAMEPENWV-----PVAKPRVSMLNYDGL--LGGFSAGPATVAV 293

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2127856 AT4G32480 "AT4G32480" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 125/258 (48%), Positives = 157/258 (60%)

Query:    11 SEEIARFLEGTANFSDIVFGFMEESSES------TVGNLXXXXXXXXX-XXXXXXAFWEA 63
             S++I +FL+G A+  D++FGF++E + S        G+                  FW+ 
Sbjct:     6 SDDIMKFLDGMASSDDVLFGFLDEGNHSPEDYNFAAGDESEVDNDTTDCNSEENRKFWQE 65

Query:    64 QEKLLQATIGRISSFESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQ 123
              E+LLQAT+ R SS E+K+RQA K +L+ ++  G  C CR PV  GCR+C+R E+S  L+
Sbjct:    66 HEQLLQATLYRTSSIETKIRQATKEALKVVRSKGLVCVCRRPVTDGCRSCLRGEVSSLLR 125

Query:   124 NVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKS--KKGDVIRVVIELNFRAEFEMARASE 181
               GY+CVI KSKW+SS EIPAG H YLEVV+KS  KKG+ IRVVIEL FRAEFEMAR SE
Sbjct:   126 EAGYDCVISKSKWRSSHEIPAGEHEYLEVVDKSVSKKGE-IRVVIELCFRAEFEMARGSE 184

Query:   182 EYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKYMQAKWLGGYQ 241
             EY RL+  LPEV+VGKTERL                       PWRKHKYMQAKW G  +
Sbjct:   185 EYKRLIGMLPEVYVGKTERLKSLIKILCTAAKKCMKDKKMHMGPWRKHKYMQAKWFGTCE 244

Query:   242 R----PTAETTPLIMMPV 255
             R    P +ET    M PV
Sbjct:   245 RKSVSPVSETEEN-MFPV 261

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2079691 AT3G07350 "AT3G07350" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/140 (35%), Positives = 79/140 (56%)

Query:   111 RTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVV-EKSKKGDVIRVVIELN 169
             R   ++++   L+ +G+N  ICK+KWKSS  + AGNH +++VV   S     +R +++L+
Sbjct:   132 RAVFQRKVMSLLRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSASSQSVRFIVDLD 191

Query:   170 FRAEFEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKH 229
             F + F++AR + +Y R++  LP VFVGK + L                       PWRK+
Sbjct:   192 FSSRFQIARPTSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKN 251

Query:   230 KYMQAKWLGGYQRPTAETTP 249
             +YMQ +WLG Y+R T   TP
Sbjct:   252 RYMQTRWLGPYKR-TTNLTP 270

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130005 AT4G14620 "AT4G14620" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 49/138 (35%), Positives = 76/138 (55%)

Query:   114 MRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAE 173
             +RK +   L ++GY+  ICKSKW  +  IPAG + Y++V+   +     R++I+++FR+E
Sbjct:   143 LRKIVVDELSSLGYDSSICKSKWDKTRSIPAGEYEYIDVIVNGE-----RLIIDIDFRSE 197

Query:   174 FEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKYMQ 233
             FE+AR +  Y  L+  LP +FVGK++R+                       PWRK  YM+
Sbjct:   198 FEIARQTSGYKELLQSLPLIFVGKSDRIRQIVSIVSEASKQSLKKKGMHFPPWRKADYMR 257

Query:   234 AKWLGGYQRPTAETTPLI 251
             AKWL  Y R + E  P +
Sbjct:   258 AKWLSSYTRNSGEKKPTV 275

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090295 AT3G25240 "AT3G25240" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 51/155 (32%), Positives = 83/155 (53%)

Query:   111 RTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGD--VIRVVIEL 168
             +T  R +++  L+ +G++  +C SKW SSS++ AG++ +++VV K    D   +R +++L
Sbjct:   112 KTVFRDKVASFLRELGHDAAVCVSKWTSSSKLIAGSYHFIDVVHKPSDNDQKAVRYLVDL 171

Query:   169 NFRAEFEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRK 228
             +F +EFE+AR + EY R +  LP VFVG  E L                       PWR+
Sbjct:   172 DFASEFEIARPTREYTRGLQLLPNVFVGNEENLRTIVRESCDAAKRSMKSRGLSLPPWRR 231

Query:   229 HKYMQAKWLGGYQRPTAETTPLIMMPVVSYAYADR 263
               Y+Q KW G Y+R    +  L + P+ S A + R
Sbjct:   232 SSYLQHKWFGPYKRKVGSS--LGVKPLNSDAVSCR 264

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2084593 AT3G22970 "AT3G22970" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 46/129 (35%), Positives = 72/129 (55%)

Query:   114 MRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAE 173
             M+K ++  L ++ YN  ICKSKW  S   PAG + Y++V+   +     R++I+++FR+E
Sbjct:   168 MKKIVNEGLLSLNYNSSICKSKWDKSPSFPAGEYEYIDVIIGEE-----RLIIDVDFRSE 222

Query:   174 FEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKYMQ 233
             F++AR +  Y  L+  LP +FVGK++RL                       PWRK +YM+
Sbjct:   223 FDIARQTSGYKVLLQSLPFIFVGKSDRLSQIVFLISEAAKQSLKKKGMPFPPWRKAEYMR 282

Query:   234 AKWLGGYQR 242
             +KWL  Y R
Sbjct:   283 SKWLSSYTR 291

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2040389 AT2G38820 "AT2G38820" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 48/158 (30%), Positives = 92/158 (58%)

Query:    86 VKYSLEEI-KLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPA 144
             V+  L ++ K+A +  +C+  +  G  +C+ K ++  L ++GY+  +CKS+W+ S   PA
Sbjct:   135 VRNLLTDVTKIAETSKNCK--LKDG--SCL-KSVANGLVSLGYDAALCKSRWEKSPSCPA 189

Query:   145 GNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLXXX 204
             G + Y++V+    KG+  R++I+++F+++FE+ARA++ Y  ++  LP +FVGK +RL   
Sbjct:   190 GEYEYVDVI---MKGE--RLLIDIDFKSKFEIARATKTYKSMLQTLPYIFVGKADRLQKI 244

Query:   205 XXXXXXXXXXXXXXXXXXXXPWRKHKYMQAKWLGGYQR 242
                                 PWR+ +Y+++KWL  + R
Sbjct:   245 IVLICKAAKQSLKKKGLHVPPWRRAEYVKSKWLSSHVR 282

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2039757 AT2G39650 "AT2G39650" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 37/138 (26%), Positives = 75/138 (54%)

Query:   107 AGGCR-TCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVV-EKSKKGDVIRV 164
             +G C  +C+R  ++  L+  GY+  +C ++W+   ++P G++ Y++++   ++ G   R+
Sbjct:   102 SGTCNASCIRFYLAKLLRLSGYDAAVCSARWQGGGKVPGGDNEYIDIILSDTEVGQDDRL 161

Query:   165 VIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXX 224
             +++++FR+ FE+ARA + Y R++  LP V+VG   RL                       
Sbjct:   162 IVDIDFRSHFEIARAVDSYQRIMESLPVVYVGTVARLNQFLQVMVDAAKFSLKQNSMPLP 221

Query:   225 PWRKHKYMQAKWLGGYQR 242
             PWR   Y+++KW   ++R
Sbjct:   222 PWRSLNYLRSKWHSPHKR 239

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2008870 AT1G12030 "AT1G12030" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 43/132 (32%), Positives = 67/132 (50%)

Query:   115 RKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEF 174
             ++     L+N G++  +CKS+W+   +  AG + Y++V    K GD  R ++E N   EF
Sbjct:   111 KRHFMAYLRNKGFDAGLCKSRWEKFGKNTAGKYEYVDV----KAGDKNRYIVETNLAGEF 166

Query:   175 EMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKYMQA 234
             E+AR +  Y  ++ ++P VFVG  E L                       PWR++ YMQA
Sbjct:   167 EIARPTTRYLSVLAQVPRVFVGTPEELKQLVRIMCFEIRRSMKRADIFVPPWRRNGYMQA 226

Query:   235 KWLGGYQRPTAE 246
             KW G Y+R + E
Sbjct:   227 KWFGHYKRTSNE 238

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2096946 AT3G54550 "AT3G54550" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 46/136 (33%), Positives = 73/136 (53%)

Query:   116 KEISVRLQNVGYNCVICKSKWKSSSE----IPAGNHTYLEVVEKSKKGDVIRVVIELNFR 171
             K +   L  +GY+  ICKS+W+ S      +PAG++ YL+V   +  G+  RV+I+ +F+
Sbjct:   146 KNVVDELVALGYDAAICKSRWEKSKTKSYCVPAGDYEYLDV---NIGGE--RVLIDFDFQ 200

Query:   172 AEFEMARASEEYNRLVNRLPEVFVGKTERLXXXXXXXXXXXXXXXXXXXXXXXPWRKHKY 231
             ++FE+AR+SE Y  +   LP VFVG+ +RL                       PWR+ +Y
Sbjct:   201 SKFEIARSSETYESISKTLPYVFVGQVDRLTKVVVFLSKAAKTSFRKKGLFMPPWRRAEY 260

Query:   232 MQAKWLGGYQRPTAET 247
             +  KW+  Y R T +T
Sbjct:   261 LLTKWVSQYDR-TKQT 275

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	296
pfam04720	218	pfam04720, DUF506, Protein of unknown function (DU	2e-76
TIGR01615	131	TIGR01615, A_thal_3542, uncharacterized plant-spec	2e-58

>gnl|CDD|218228 pfam04720, DUF506, Protein of unknown function (DUF506)

 Score =  231 bits (592), Expect = 2e-76
 Identities = 87/230 (37%), Positives = 147/230 (63%), Gaps = 25/230 (10%)

Query: 25  SDIVFGFMEESSESTVGNLC--------DCKEDDNEDVEENKAFWEAQEKLLQATIGRIS 76
           SD+V GF+E+ +E+              D +++++   E+N    +  + LL+ T+ R  
Sbjct: 2   SDMVQGFLEDGNETVEDESFSGSGDDSSDEEDEEDSSSEDNGDVSDELKSLLECTLYRER 61

Query: 77  SF---ESKLRQAVKYSLEEIKLAGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICK 133
                E+K+ +AV+ + +              V+ G R+C+R+++   L+ +GY+  ICK
Sbjct: 62  YRRSLEAKVARAVEEASKH-------------VSSGNRSCLRRKVMSLLRELGYDAAICK 108

Query: 134 SKWKSSSEIPAGNHTYLEVVEKSK-KGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPE 192
           SKW+SS ++PAG + Y++VV+  + K   +R++++L+FR+EFE+AR +EEY R++  LP 
Sbjct: 109 SKWESSGKVPAGEYEYIDVVDGGESKKQEVRLIVDLDFRSEFEIARPTEEYKRILQSLPR 168

Query: 193 VFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQR 242
           VFVGK ERLK +++IMC AAK+ +K+K MH+ PWR+++YMQAKW G Y+R
Sbjct: 169 VFVGKVERLKQLVRIMCDAAKRSLKKKGMHLPPWRRNEYMQAKWFGPYKR 218

Family of uncharacterized plant proteins. Length = 218

>gnl|CDD|233493 TIGR01615, A_thal_3542, uncharacterized plant-specific domain TIGR01615

 Score =  183 bits (466), Expect = 2e-58
 Identities = 69/129 (53%), Positives = 100/129 (77%), Gaps = 1/129 (0%)

Query: 115 RKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSK-KGDVIRVVIELNFRAE 173
           R+ +   L+++GY+  ICKSKW SS +IPAG + Y++VV+    K   +RV+I+L+FR+E
Sbjct: 1   RRIVMSLLRSLGYDAAICKSKWDSSGDIPAGKYEYIDVVDGDGSKKQEMRVIIDLDFRSE 60

Query: 174 FEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQ 233
           FE+AR +EEY RL+  LPEVFVG TERL+ ++++MC AAKK +K+K M + PWRK++YMQ
Sbjct: 61  FEIARPTEEYKRLLESLPEVFVGTTERLRQLVRLMCDAAKKSLKKKGMPLPPWRKNRYMQ 120

Query: 234 AKWLGGYQR 242
           +KWLG Y+R
Sbjct: 121 SKWLGPYKR 129

This model represents a domain found toward the C-terminus of a number of uncharacterized plant proteins. The domain is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence. Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	296
PF04720	218	DUF506: Protein of unknown function (DUF506) ; Int	100.0
TIGR01615	131	A_thal_3542 uncharacterized plant-specific domain	100.0
PF00797	240	Acetyltransf_2: N-acetyltransferase; InterPro: IPR	93.18
PRK15047	281	N-hydroxyarylamine O-acetyltransferase; Provisiona	88.73
PF08742	74	C8: C8 domain; InterPro: IPR014853 The proteins in	84.32

>PF04720 DUF506: Protein of unknown function (DUF506) ; InterPro: IPR006502 This family of uncharacterised plant proteins are defined by a region found toward the C terminus

Probab=100.00  E-value=1.1e-71  Score=505.06  Aligned_cols=209  Identities=44%  Similarity=0.832  Sum_probs=180.3

Q ss_pred             HHHHHhhhhhcCCCCCC-----CCCCCC---CCCCCccHHHhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHh
Q 022512           24 FSDIVFGFMEESSESTV-----GNLCDC---KEDDNEDVEENKAFWEAQEKLLQATIGRISSFESKLRQAVKYSLEEIKL   95 (296)
Q Consensus        24 Ls~mV~~FlEe~~~~~~-----~s~~d~---~ddd~~~~~e~~~f~~~~~~lL~~~l~~~s~~e~~L~~~v~~a~~~~~~   95 (296)
                      |++||++|||+++.+..     ++++++   ++|+++..++...+|+++..||+....++ ..+.+|+++|.++++....
T Consensus         1 Ls~mV~~FlE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~e~l~~Ll~~~~~~e-~~~~~l~~~v~~~v~~~~~   79 (218)
T PF04720_consen    1 LSDMVQGFLEEEESSAPSFSFSGNGDDSSDEDSDSDSGSSESAEFWEELQELLQCISERE-SSRRRLLADVRRAVEEAKD   79 (218)
T ss_pred             CHHHHHHHhccCCcccccccccccCCCCccccccccCcccchHHHHHHHHHHHhcccccc-chHHHHHHHHHHHHHHHHh
Confidence            78999999999976431     222222   22223455567889999999999877654 4478888888888887654


Q ss_pred             hCCccccCCCCCCCcchhhHHHHHHHHHhcCCceeeeeccCCCCCCcCCcceEEEEEeecCC-CCceeEEEEecCccccc
Q 022512           96 AGSKCSCRTPVAGGCRTCMRKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSK-KGDVIRVVIELNFRAEF  174 (296)
Q Consensus        96 ~~~~c~c~r~~~~~c~~~~~r~v~~~Lr~~GydAaiCkSkW~~s~~~p~G~heyIdV~~~~~-~g~~~r~IVD~dFr~qF  174 (296)
                      ..         ..+|++|++|.||++||.+||||+||||+|++++++|+|+||||||++.+. .+..+||||||+||+||
T Consensus        80 ~~---------~~~~~~~~rr~v~~~Lr~~GydAaiCkS~W~~s~~~p~g~yeyIdV~~~~~~~~~~~r~IVd~~fr~~F  150 (218)
T PF04720_consen   80 EI---------KRGCRSCLRRSVMSRLRALGYDAAICKSRWESSGGIPAGEYEYIDVIVSGSSSGKSERYIVDPDFRSQF  150 (218)
T ss_pred             hh---------cccchHHHHHHHHHHHHhCCCCEEEEEecCCCCCCCCCcceeEEEEEECCCCCCcceeEEEecchHhCe
Confidence            22         025789999999999999999999999999999999999999999999754 45569999999999999


Q ss_pred             eecCCCHHHHHHHhhCCCceeeChhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHhhhcCCCCC
Q 022512          175 EMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQR  242 (296)
Q Consensus       175 eIArpT~~Y~~ll~~LP~vfVG~~erL~~iV~~mc~Aak~S~k~~gm~lPPWRk~~ym~aKWl~~~~R  242 (296)
                      ||||||++|+++|+.||.||||++++|++||++||+|||+|||++|||||||||++|||+|||++|+|
T Consensus       151 eiArpt~~Y~~ll~~lP~vfVG~~~~L~~iV~~~c~a~k~s~k~~g~~lPPWR~~~ym~aKW~~~y~R  218 (218)
T PF04720_consen  151 EIARPTPEYAALLAALPEVFVGTPERLKQIVRLMCDAAKRSFKERGMHLPPWRKNSYMQAKWLSPYKR  218 (218)
T ss_pred             eecCCCHHHHHHHHhCCCceEcCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCchHHHHHhccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998

This region is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence.

>TIGR01615 A_thal_3542 uncharacterized plant-specific domain TIGR01615

Probab=100.00  E-value=7.5e-63  Score=417.32  Aligned_cols=130  Identities=53%  Similarity=1.039  Sum_probs=123.6

Q ss_pred             HHHHHHHHHhcCCceeeeeccCCCCCCcCCcceEEEEEeecCC-CCceeEEEEecCccccceecCCCHHHHHHHhhCCCc
Q 022512          115 RKEISVRLQNVGYNCVICKSKWKSSSEIPAGNHTYLEVVEKSK-KGDVIRVVIELNFRAEFEMARASEEYNRLVNRLPEV  193 (296)
Q Consensus       115 ~r~v~~~Lr~~GydAaiCkSkW~~s~~~p~G~heyIdV~~~~~-~g~~~r~IVD~dFr~qFeIArpT~~Y~~ll~~LP~v  193 (296)
                      ||.||++||.+||||+||||+|++++++|+|+||||||++.+. ++..+|||||+|||+||||||||++|+++|+.||.|
T Consensus         1 ~r~v~~~Lr~~Gy~AaiCkS~W~~s~~~p~G~yeyidV~~~~~~~~~~~R~iVd~dFr~~FeiARpt~~Y~~ll~~LP~v   80 (131)
T TIGR01615         1 RRIVMSLLRSLGYDAAICKSKWDSSGDIPAGKYEYIDVVDGDGSKKQEMRVIIDLDFRSEFEIARPTEEYKRLLESLPEV   80 (131)
T ss_pred             ChhHHHHHHHCCCCeeeEEeecCCCCCCCCCceeeEEEEecCCCCCCcceEEEeccchhhceecCCCHHHHHHHHhCCcc
Confidence            4789999999999999999999999999999999999998643 244589999999999999999999999999999999


Q ss_pred             eeeChhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHhhhcCCCCCCC
Q 022512          194 FVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAKWLGGYQRPT  244 (296)
Q Consensus       194 fVG~~erL~~iV~~mc~Aak~S~k~~gm~lPPWRk~~ym~aKWl~~~~R~~  244 (296)
                      |||+.++|++||++||+|||+|||++|||||||||++|||+|||+||+|++
T Consensus        81 FVG~~~rL~~iV~~mc~Aak~Slk~~gmhlPPWRk~~ym~aKWl~~~~R~~  131 (131)
T TIGR01615        81 FVGTTERLRQLVRLMCDAAKKSLKKKGMPLPPWRKNRYMQSKWLGPYKRTS  131 (131)
T ss_pred             eECCHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHhccCCccCCC
Confidence            999999999999999999999999999999999999999999999999953

of a number of uncharacterized plant proteins. The domain is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence.

>PF00797 Acetyltransf_2: N-acetyltransferase; InterPro: IPR001447 Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30 kDa

Probab=93.18  E-value=0.26  Score=44.18  Aligned_cols=60  Identities=18%  Similarity=0.368  Sum_probs=44.2

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCC-cCCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSE-IPAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~-~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++.++.++  +..... .+.+.|--|.|.+.   |  .+|+||+.|=..
T Consensus        47 G~C-~elN~lf~~lL~~lGf~v~~~~arv~~~~~~~~~~~~~H~~liV~~~---~--~~ylvDvGfG~~  109 (240)
T PF00797_consen   47 GYC-FELNGLFYWLLRELGFDVTLVSARVYSPGGPDYWPPRTHLVLIVTLD---G--ERYLVDVGFGGP  109 (240)
T ss_dssp             B-H-HHHHHHHHHHHHHCT-EEEEEEEEEETTTTTCCSSSEEEEEEEEEET---T--EEEEE-SSSTTC
T ss_pred             eEh-HHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCceEEEEEEEC---C--EEEEEeccCCCc
Confidence            334 445678899999999999998876  444333 57889999999884   4  499999999876

It facilitates the transfer of an acetyl group from acetyl coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (Mycobacterium tuberculosis, Mycobacterium smegmatis etc) to Homo sapiens (Human). It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid. NAT catalyses the reaction: Acetyl-coA + arylamine = coA + N-acetylarylamine NAT is the target of a common genetic polymorphism of clinical relevance in humans. The N-acetylation polymorphism is determined by low or high NAT activity in liver. NAT has been implicated in the action and toxicity of amine-containing drugs, and in the susceptibility to cancer and systematic lupus erythematosus. Two highly similar human genes for NAT, termed NAT1 and NAT2, encode genetically invariant and variant NAT proteins, respectively. ; GO: 0016407 acetyltransferase activity, 0008152 metabolic process; PDB: 1W6F_A 1W5R_A 1GX3_D 2PQT_A 2IJA_A 1W4T_A 2BSZ_B 3D9W_B 3LTW_A 3LNB_A ....

>PRK15047 N-hydroxyarylamine O-acetyltransferase; Provisional

Probab=88.73  E-value=1.2  Score=42.36  Aligned_cols=54  Identities=17%  Similarity=0.330  Sum_probs=42.6

Q ss_pred             hHHHHHHHHHhcCCceeeeecc--CCCCCCcCCcceEEEEEeecCCCCceeEEEEecCccc
Q 022512          114 MRKEISVRLQNVGYNCVICKSK--WKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRA  172 (296)
Q Consensus       114 ~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~  172 (296)
                      +-..+...|+++||++.....+  |...+..++..|-.+.|.+.   |+  +|+||+.|-+
T Consensus        72 ~N~Lf~~~L~~LGF~v~~~~arV~~~~~~~~~~~tH~~l~V~i~---~~--~yLvDVGFG~  127 (281)
T PRK15047         72 QNGLFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVELE---GE--KWIADVGFGG  127 (281)
T ss_pred             HHHHHHHHHHHcCCcEEEEEEEEEecCCCCCCCcCcEEEEEEEC---Ce--eEEEEecCCC
Confidence            4567888999999999875554  55444557779999999984   43  9999999986

>PF08742 C8: C8 domain; InterPro: IPR014853 The proteins in this entry contained a domain rich in positionally conserved cysteine residues

Probab=84.32  E-value=1  Score=33.77  Aligned_cols=62  Identities=15%  Similarity=0.373  Sum_probs=44.4

Q ss_pred             EEEecCccccceecCCCHHHHHHHhhCCCceeeChhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCch
Q 022512          164 VVIELNFRAEFEMARASEEYNRLVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHK  230 (296)
Q Consensus       164 ~IVD~dFr~qFeIArpT~~Y~~ll~~LP~vfVG~~erL~~iV~~mc~Aak~S~k~~gm~lPPWRk~~  230 (296)
                      +|.|+.|+.=+.+.-|++-|...+..+=. +-|..   ..+-..|.+-++.+ +..|..+++||+..
T Consensus        10 ~l~~~~F~~C~~~v~~~~f~~~C~~d~C~-~~~~~---~~~C~~l~~Ya~~C-~~~g~~~~~WR~~~   71 (74)
T PF08742_consen   10 ILLDPEFAPCHSVVDPDPFYEACVYDMCA-CPGSQ---QCLCEALSAYAREC-QRAGICVGDWRTPT   71 (74)
T ss_pred             HHcCchhhhhcccCccHHHHHHHHHHHcC-CCCCc---chhhHHHHHHHHHH-HHCcCCCCCCCCcC
Confidence            45688899999999999999999966543 22222   33444455555555 77899999999864

Most proteins contains 7 or 8 cysteine residues. The domain is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing IPR001846 from INTERPRO and IPR002919 from INTERPRO.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	296
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 40/324 (12%), Positives = 86/324 (26%), Gaps = 95/324 (29%)

Query: 27  IVFGFMEESSESTVGNLCDCKEDDNEDVEENKAFWEAQEKLLQATIGRISSFESKLR--Q 84
           ++ G +  S ++ V     C     +   + K FW          +   +S E+ L   Q
Sbjct: 154 LIDG-VLGSGKTWVALDV-CLSYKVQCKMDFKIFW--------LNLKNCNSPETVLEMLQ 203

Query: 85  AVKYSLEEIKLAGSKCSCRTP-----VAGGCRTCMRKEISVR----LQNVGYNCVI---- 131
            + Y ++    + S  S         +    R  ++ +        L NV          
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

Query: 132 --CK----SKWKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAEFEMARASEEYNR 185
             CK    +++K  ++  +   T    ++          V  L      +          
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LLKYLDCR-------- 314

Query: 186 LVNRLPEVFVGKTERLKAVIKIMCAAAKKCMKEKKMHIAPWRKHKYMQAK---------- 235
               LP   +    R  ++I     A    +++       W+     +            
Sbjct: 315 -PQDLPREVLTTNPRRLSII-----AES--IRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 236 -----------------------------WLGGYQRPTAETTPLIMMPVVSYAYADRQPK 266
                                        W             +++  +  Y+  ++QPK
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD----VIKSDVMVVVNKLHKYSLVEKQPK 422

Query: 267 PKAAA-SMLTFDL---MENFGGLH 286
               +   +  +L   +EN   LH
Sbjct: 423 ESTISIPSIYLELKVKLENEYALH 446

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	296
1e2t_A	284	NAT, N-hydroxyarylamine O-acetyltransferase; acety	90.74
1w4t_A	299	Arylamine N-acetyltransferase; 5- aminosalicylic a	89.67
2bsz_A	278	Arylamine N-acetyltransferase 1; acyltransferase,	89.06
2vfb_A	280	Arylamine N-acetyltransferase; NAT, acetyl COA, my	86.69
1w5r_A	278	Arylamine N-acetyltransferase; acyltransferase; 1.	86.66
3d9w_A	293	Putative acetyltransferase; arylamine N-acetyltran	86.57
3lnb_A	309	N-acetyltransferase family protein; arylamine N-ac	86.48

>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5

Probab=90.74  E-value=0.53  Score=43.10  Aligned_cols=60  Identities=17%  Similarity=0.325  Sum_probs=45.9

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCcCCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+..++..|-.+.|.+.   |  .+||||+.|=+.
T Consensus        70 GyC-~ElN~Lf~~~L~~LGF~V~~~~~rV~~~~~~~~~~~~H~~l~V~id---g--~~ylvDVGFG~~  131 (284)
T 1e2t_A           70 GYC-FELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVE---D--EQWIADVGFGGQ  131 (284)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEET---T--EEEEECSCSCTT
T ss_pred             EEh-HHHHHHHHHHHHHCCCeEEEEEEEEecCCCCCCCCCccEEEEEEEC---C--ceEEEecCCCcc
Confidence            334 334567888999999999987654  66555566789999999984   4  499999999763

>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5

Probab=89.67  E-value=0.62  Score=43.13  Aligned_cols=60  Identities=15%  Similarity=0.326  Sum_probs=45.9

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCc--CCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEI--PAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+..  ++..|-.+.|.+.   |  .+||||+.|=+.
T Consensus        91 GyC-~ElN~Lf~~~L~~LGF~V~~l~arV~~~~~~~~~~~~~~H~~l~V~id---g--~~ylvDVGFG~~  154 (299)
T 1w4t_A           91 GYC-FELNSLFARLLLALGYELELLVARVRWGLPDDAPLTQQSHLMLRLYLA---E--GEFLVDVGFGSA  154 (299)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCEEEEEEEEECTTCCTTSCCCCEEEEEEEEEET---T--EEEEECSCSGGG
T ss_pred             cch-HhHHHHHHHHHHHcCCeEEEEEEEEEeCCCCcCCCCCCccEEEEEEEC---C--ceEEEeCCCCCc
Confidence            334 335667888999999999997654  6665555  5788999999984   4  499999999774

>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5

Probab=89.06  E-value=0.61  Score=42.66  Aligned_cols=60  Identities=20%  Similarity=0.315  Sum_probs=45.7

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCc-CCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEI-PAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~-p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+.. ++..|-.+.|.+.   |  .+||||+.|=+.
T Consensus        71 GyC-~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~H~~l~V~id---g--~~ylvDVGFG~~  133 (278)
T 2bsz_A           71 GYC-FEHNLLFMHALKALGFEVGGLAARVLWGQSEDAITARSHMLLRVELD---G--RTYIADVGFGGL  133 (278)
T ss_dssp             BCH-HHHHHHHHHHHHHHTCEEEEEEEEECSSCCSSSSCCCCEEEEEEEET---T--EEEEECSCCSSS
T ss_pred             eeh-HHHHHHHHHHHHHCCCeEEEEEEEEeeCCCCCCCCCCccEEEEEEEC---C--ceEEEeCCCCcc
Confidence            334 335567888999999999987654  6665555 4688999999984   4  499999999774

>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*

Probab=86.69  E-value=1  Score=41.21  Aligned_cols=60  Identities=25%  Similarity=0.431  Sum_probs=45.8

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCc--CCcceEEEEEeecCCCCceeE--EEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEI--PAGNHTYLEVVEKSKKGDVIR--VVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~g~~~r--~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+..  ++..|-.+.|.+.   |+  +  ||||+.|=+.
T Consensus        68 GyC-~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~id---g~--~~~ylvDVGFG~~  133 (280)
T 2vfb_A           68 GYC-YEHNGLIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFP---GC--QGPYLVDVGFGGM  133 (280)
T ss_dssp             BCH-HHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECT---TC--SSCEEECSCSGGG
T ss_pred             eEh-HHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEEC---Ce--EEEEEEecCCCcc
Confidence            334 334567788999999999997654  6666666  4788999999884   43  6  9999999764

>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A

Probab=86.66  E-value=0.87  Score=41.57  Aligned_cols=60  Identities=18%  Similarity=0.379  Sum_probs=45.7

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCc--CCcceEEEEEeecCCCCceeE--EEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEI--PAGNHTYLEVVEKSKKGDVIR--VVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~--p~G~heyIdV~~~~~~g~~~r--~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+..  ++..|-.+.|.+.   |+  +  ||||+.|=+.
T Consensus        71 GyC-~ElN~Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~id---g~--~~~ylvDVGFG~~  136 (278)
T 1w5r_A           71 GYQ-YEHNGLLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVP---GA--DGRYLVDVGFGGQ  136 (278)
T ss_dssp             BCH-HHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECS---SC--SCCEEECSCSCTT
T ss_pred             eeh-HHHHHHHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEEC---Ce--EEEEEEecCCCcc
Confidence            334 335567888999999999997654  7666666  4788999999884   43  6  9999999764

>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}

Probab=86.57  E-value=1.2  Score=41.01  Aligned_cols=58  Identities=14%  Similarity=0.262  Sum_probs=43.5

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCcCCcceEEEEE-eecCCCCceeEEEEecCcc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEIPAGNHTYLEV-VEKSKKGDVIRVVIELNFR  171 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~p~G~heyIdV-~~~~~~g~~~r~IVD~dFr  171 (296)
                      |-| -=+-..+...|+++||++..+..+  |.. +..++..|--+.| .+.  .|+  +||||+.|=
T Consensus        80 GyC-~ElN~Lf~~~L~~LGF~V~~~~arV~~~~-~~~~~~~H~~l~V~~l~--dg~--~ylvDVGFG  140 (293)
T 3d9w_A           80 GYC-YENAGLFAAALERLGFGVTGHTGRVTMGA-GGLRPATHALLRVTTAD--DDR--VWMCDVGFG  140 (293)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCEEEEEEEEECTTC-CSCCCEEEEEEEEECSS--CSC--EEEECCSSS
T ss_pred             cCh-HHHHHHHHHHHHHcCCeEEEEEEEEecCC-CCCCCCccEEEEEEEcC--CCC--eEEEecCCC
Confidence            345 335667889999999999997765  543 3456788999999 762  144  999999997

>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}

Probab=86.48  E-value=1  Score=42.24  Aligned_cols=60  Identities=15%  Similarity=0.217  Sum_probs=45.5

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCc-CCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEI-PAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~-p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-..+...|+++||++..+..+  |...+.. +.+.|--+.|.+.   |  .+||||+.|-+.
T Consensus        97 GyC-~ElN~lf~~~L~~lGf~v~~~~arV~~~~~~~~~~~~~H~~l~V~~~---g--~~ylvDVGFG~~  159 (309)
T 3lnb_A           97 GLC-YELNSLLYYFLMDCGFQVYKVAGTVYDLYDNKWKPDDGHVIIILHHN---K--KDYVIDAGFASH  159 (309)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECSTTCEEEEEEEET---T--EEEEECSCSTTC
T ss_pred             cch-HHHHHHHHHHHHHcCCeEEEEeEEEecCCCCCCCCCCccEEEEEEEC---C--eEEEEecCCCCc
Confidence            334 345668889999999999998776  3333443 5678999999884   4  499999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	296
d1e2ta_	274	Arylamine N-acetyltransferase {Salmonella typhimur	92.68
d1w5ra1	273	Arylamine N-acetyltransferase {Mycobacterium smegm	91.35
d2bsza1	270	Arylamine N-acetyltransferase {Rhizobium loti [Tax	90.1
d1w4ta1	277	Arylamine N-acetyltransferase {Pseudomonas aerugin	88.5

>d1e2ta_ d.3.1.5 (A:) Arylamine N-acetyltransferase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.68  E-value=0.12  Score=45.04  Aligned_cols=59  Identities=17%  Similarity=0.321  Sum_probs=45.5

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCCcCCcceEEEEEeecCCCCceeEEEEecCccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSEIPAGNHTYLEVVEKSKKGDVIRVVIELNFRA  172 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~  172 (296)
                      |-| -=+-..+...|+++||++.+...+  |...+..|.+.|--+.|.+.   |  .+|+||+.|-+
T Consensus        68 GyC-~ElN~lf~~lL~~LGF~v~~~~arV~~~~~~~~~~~~H~~l~V~i~---~--~~yLvDvGfG~  128 (274)
T d1e2ta_          68 GYC-FELNGLFERALRDIGFNVRSLLGRVILSHPASLPPRTHRLLLVDVE---D--EQWIADVGFGG  128 (274)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCCEEEEEEEECTTCCSSCCCSCEEEEEEEET---T--EEEEECSCSCT
T ss_pred             ccc-hhhHHHHHHHHHHcCCceEEEEEEEecCCCCCCCCCceEEEEEEEC---C--eeEEEeccCCC
Confidence            345 335667889999999999886554  55556667889999999984   4  49999999953

>d1w5ra1 d.3.1.5 (A:3-275) Arylamine N-acetyltransferase {Mycobacterium smegmatis [TaxId: 1772]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Mycobacterium smegmatis [TaxId: 1772]

Probab=91.35  E-value=0.11  Score=45.08  Aligned_cols=61  Identities=20%  Similarity=0.370  Sum_probs=45.8

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCCC--cCCcceEEEEEeecCCCCceeEEEEecCccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSSE--IPAGNHTYLEVVEKSKKGDVIRVVIELNFRA  172 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~~--~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~  172 (296)
                      |-| -=+-..+...|+++||++..+..+  |...++  .+++.|-.+.|.+.   |+..+|+||+.|-+
T Consensus        66 GyC-~E~N~lf~~~L~~LGf~v~~~~~rV~~~~~~~~~~~~~~H~~l~V~i~---g~~~~ylvDVGfG~  130 (273)
T d1w5ra1          66 GYQ-YEHNGLLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVP---GADGRYLVDVGFGG  130 (273)
T ss_dssp             BCH-HHHHHHHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECS---SCSCCEEECSCSCT
T ss_pred             ccc-hhhhHHHHHHHHHcCCceEEEEEEEEecCCCCCCCCCCcceEEEEEEC---CCCccEEEEccCCc
Confidence            344 334667889999999999998774  665543  46789999999985   33358999999953

>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Rhizobium loti [TaxId: 381]

Probab=90.10  E-value=0.3  Score=42.13  Aligned_cols=59  Identities=22%  Similarity=0.336  Sum_probs=44.0

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeec--cCCCCCC-cCCcceEEEEEeecCCCCceeEEEEecCccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKS--KWKSSSE-IPAGNHTYLEVVEKSKKGDVIRVVIELNFRA  172 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkS--kW~~s~~-~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~  172 (296)
                      |-| -=+-..+...|+++||++.....  .|...++ .+++.|--+.|.+.   |  .+|+||+.|-+
T Consensus        66 G~C-~E~N~lf~~lL~~LGF~v~~~~~rV~~~~~~~~~~~~~H~~l~V~i~---g--~~ylvDvGfG~  127 (270)
T d2bsza1          66 GYC-FEHNLLFMHALKALGFEVGGLAARVLWGQSEDAITARSHMLLRVELD---G--RTYIADVGFGG  127 (270)
T ss_dssp             BCH-HHHHHHHHHHHHHHTCEEEEEEEEECSSCCSSSSCCCCEEEEEEEET---T--EEEEECSCCSS
T ss_pred             ccc-hhhhHHHHHHHHHcCCceEEEEEEEecCCCCCCCCCCCCEEEEEEEC---C--eeEEEecccCc
Confidence            445 33566788999999999988544  4555444 45678999999984   4  49999999965

>d1w4ta1 d.3.1.5 (A:1-277) Arylamine N-acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.50  E-value=0.4  Score=41.27  Aligned_cols=60  Identities=15%  Similarity=0.329  Sum_probs=44.2

Q ss_pred             CCcchhhHHHHHHHHHhcCCceeeeecc--CCCCC--CcCCcceEEEEEeecCCCCceeEEEEecCcccc
Q 022512          108 GGCRTCMRKEISVRLQNVGYNCVICKSK--WKSSS--EIPAGNHTYLEVVEKSKKGDVIRVVIELNFRAE  173 (296)
Q Consensus       108 ~~c~~~~~r~v~~~Lr~~GydAaiCkSk--W~~s~--~~p~G~heyIdV~~~~~~g~~~r~IVD~dFr~q  173 (296)
                      |-| -=+-.-+...|+++||++..+..+  |...+  ..+++.|--+.|.+.   |  .+|+||+.|-..
T Consensus        71 GyC-~E~N~Lf~~lL~~LGf~v~~~~arV~~~~~~~~~~~~~~H~~l~V~i~---~--~~ylvDvGfG~~  134 (277)
T d1w4ta1          71 GYC-FELNSLFARLLLALGYELELLVARVRWGLPDDAPLTQQSHLMLRLYLA---E--GEFLVDVGFGSA  134 (277)
T ss_dssp             BCH-HHHHHHHHHHHHHTTCEEEEEEEEECTTCCTTSCCCCEEEEEEEEEET---T--EEEEECSCSGGG
T ss_pred             ccc-hhhhHHHHHHHHHcCCceEEEEEEEEecCCCCCCCCCCceEEEEEEEC---C--ceEEEeeccCCc
Confidence            345 334667889999999999987664  54333  345688999999884   4  489999999653