Citrus Sinensis ID: 022519
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 296 | ||||||
| 359479459 | 422 | PREDICTED: uncharacterized protein LOC10 | 0.854 | 0.599 | 0.828 | 1e-125 | |
| 449444893 | 416 | PREDICTED: uncharacterized protein LOC10 | 0.854 | 0.608 | 0.832 | 1e-124 | |
| 325461580 | 430 | putative astaxanthin synthase [Carica pa | 0.854 | 0.588 | 0.832 | 1e-124 | |
| 224106217 | 431 | predicted protein [Populus trichocarpa] | 0.854 | 0.587 | 0.809 | 1e-123 | |
| 255544942 | 422 | conserved hypothetical protein [Ricinus | 0.854 | 0.599 | 0.813 | 1e-122 | |
| 164521187 | 396 | unknown, partial [Nuphar advena] | 0.854 | 0.638 | 0.801 | 1e-119 | |
| 357474051 | 420 | Saccharopine dehydrogenase family protei | 0.851 | 0.6 | 0.790 | 1e-119 | |
| 356543827 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.851 | 0.587 | 0.805 | 1e-118 | |
| 356538501 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.851 | 0.587 | 0.774 | 1e-115 | |
| 18403077 | 428 | Saccharopine dehydrogenase [Arabidopsis | 0.817 | 0.565 | 0.772 | 1e-111 |
| >gi|359479459|ref|XP_002274681.2| PREDICTED: uncharacterized protein LOC100251769 [Vitis vinifera] gi|297734956|emb|CBI17190.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/257 (82%), Positives = 239/257 (92%), Gaps = 4/257 (1%)
Query: 40 TVMAAELVRVARNESKGEPERLRYYVRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKG 99
VMAAELVRVAR+ES+G+PERLR+Y YYTAGTGGAGPTILATSFLLLGEEVVAYNKG
Sbjct: 170 NVMAAELVRVARSESQGKPERLRFY----YYTAGTGGAGPTILATSFLLLGEEVVAYNKG 225
Query: 100 EEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGM 159
E+I L+PYSGML++DFGKGIG++DV+LL+LPEVRSA E+LGVPTVSARFGTAPFFWNWGM
Sbjct: 226 EKIKLKPYSGMLNIDFGKGIGKRDVYLLHLPEVRSAHEILGVPTVSARFGTAPFFWNWGM 285
Query: 160 VTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSH 219
M L P E+LRDRSKVQ+LVQLFDP+VRA DGIAGERVSMRVDLEC+DGRNTVG+FSH
Sbjct: 286 EAMTNLLPVEFLRDRSKVQELVQLFDPIVRAMDGIAGERVSMRVDLECSDGRNTVGLFSH 345
Query: 220 RRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKA 279
RRLSVSVG A AAF LAVLEG+TQPGVWFPEEPEGIAI+AR++LLKRA+QGTINF+MNK
Sbjct: 346 RRLSVSVGFATAAFALAVLEGSTQPGVWFPEEPEGIAIDARDILLKRAAQGTINFIMNKP 405
Query: 280 PWMVETEPKELGLGIYI 296
PWMVET+PKELGLGIY+
Sbjct: 406 PWMVETDPKELGLGIYV 422
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444893|ref|XP_004140208.1| PREDICTED: uncharacterized protein LOC101209190 [Cucumis sativus] gi|449482525|ref|XP_004156312.1| PREDICTED: uncharacterized LOC101209190 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|325461580|gb|ADZ14892.1| putative astaxanthin synthase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|224106217|ref|XP_002314088.1| predicted protein [Populus trichocarpa] gi|222850496|gb|EEE88043.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255544942|ref|XP_002513532.1| conserved hypothetical protein [Ricinus communis] gi|223547440|gb|EEF48935.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|164521187|gb|ABY60455.1| unknown, partial [Nuphar advena] | Back alignment and taxonomy information |
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| >gi|357474051|ref|XP_003607310.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] gi|355508365|gb|AES89507.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356543827|ref|XP_003540361.1| PREDICTED: uncharacterized protein LOC100781532 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356538501|ref|XP_003537742.1| PREDICTED: uncharacterized protein LOC100811957 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|18403077|ref|NP_564570.1| Saccharopine dehydrogenase [Arabidopsis thaliana] gi|14517416|gb|AAK62598.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|20453277|gb|AAM19877.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|332194431|gb|AEE32552.1| Saccharopine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 296 | ||||||
| TAIR|locus:2008041 | 428 | AT1G50450 [Arabidopsis thalian | 0.851 | 0.588 | 0.730 | 3.1e-99 |
| TAIR|locus:2008041 AT1G50450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 187/256 (73%), Positives = 217/256 (84%)
Query: 41 VMAAELVRVARNESKGEPERLRYYVRFSXXXXXXXXXXPTILATSFLLLGEEVVAYNKGE 100
VMAAE+V AR+E KG+PE+LR FS PTILATSFLLLGEEV AY +GE
Sbjct: 177 VMAAEMVAAARSEDKGKPEKLR----FSYYTAGTGGAGPTILATSFLLLGEEVTAYKQGE 232
Query: 101 EITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMV 160
++ L PYSGM++VDFGKGI ++DV+LLNLPEVRS EVLGVPTV ARFGTAPFFWNWGM
Sbjct: 233 KVKLRPYSGMITVDFGKGIRKRDVYLLNLPEVRSTHEVLGVPTVVARFGTAPFFWNWGME 292
Query: 161 TMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHR 220
M +L P+E LRDR+KVQQ+V+LFDPVVRA DG AGERVSMRVDLEC+DGR TVG+FSH+
Sbjct: 293 IMTKLLPSEVLRDRTKVQQMVELFDPVVRAMDGFAGERVSMRVDLECSDGRTTVGLFSHK 352
Query: 221 RLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAP 280
+LSVSVG + AAFV A+LEG+TQPGVWFPEEP+GIA+EAREVLLKRASQGT NF++NK P
Sbjct: 353 KLSVSVGVSTAAFVAAMLEGSTQPGVWFPEEPQGIAVEAREVLLKRASQGTFNFILNKPP 412
Query: 281 WMVETEPKELGLGIYI 296
WMVETEPKE+ LGIY+
Sbjct: 413 WMVETEPKEVVLGIYV 428
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 296 286 0.00086 115 3 11 22 0.44 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 601 (64 KB)
Total size of DFA: 186 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.45u 0.18s 20.63t Elapsed: 00:00:01
Total cpu time: 20.45u 0.18s 20.63t Elapsed: 00:00:01
Start: Fri May 10 03:46:22 2013 End: Fri May 10 03:46:23 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.IX.3638.1 | hypothetical protein (399 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.V.3086.1 | • | • | 0.459 | ||||||||
| gw1.XIII.1190.1 | • | • | 0.421 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 296 | |||
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 3e-05 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 24/175 (13%)
Query: 99 GEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFG-TAPFFWNW 157
G+ + + S ++ F GIG + + L + V + +
Sbjct: 189 GKWVEVGWGSHERTIPFPYGIGPGYAYEIYLNRPGTLTRVRSWLPEADGVLFGTIRIPGY 248
Query: 158 GMVTMQRLFPAEYLRD------RSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLE--CTD 209
V ++ L LR + L L + +V + V++E
Sbjct: 249 LTV-IKLLGDLGLLRPTVHYAYIPPLDALKSLLESPASLGPEEQD-KVRIGVEVEGIDKL 306
Query: 210 GRNTVGIFSH-----------RRL-SVSVGTAIAAFVLAVLEGA-TQPGVWFPEE 251
G G + R + GT + G +PGV PEE
Sbjct: 307 GVLLTGHIYNAYGSGLSIEEGRSAMPYTTGTPAQVAAALLAGGEWAKPGVVEPEE 361
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This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 296 | |||
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.96 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 99.85 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 99.55 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.8 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 95.68 |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=235.17 Aligned_cols=228 Identities=19% Similarity=0.182 Sum_probs=185.9
Q ss_pred hhhhhhhhhhhhcccccccCCccHHHHHHHHHHHHhcccCCCCCcEEEEeeeeeeeecCCCCCC------hh--HHHHHH
Q 022519 15 FLRSEKLYLLLCCFWILILTDICYMTVMAAELVRVARNESKGEPERLRYYVRFSYYTAGTGGAG------PT--ILATSF 86 (296)
Q Consensus 15 ~~~~~~~~~~~~~g~~~~~~dPGlTn~lA~~aa~~l~~~~l~~ve~IdI~i~~~~~~~g~g~~G------~~--~~~t~l 86 (296)
|+..+.+...++++...+|+|||+||++|++++++++ |++++|||++ .+.+.-| -. +.+.+|
T Consensus 106 ~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~----~~i~si~iy~------g~~g~~~~~~l~ya~tws~e~~l 175 (389)
T COG1748 106 WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELF----DEIESIDIYV------GGLGEHGDNPLGYATTWSPEINL 175 (389)
T ss_pred hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhh----ccccEEEEEE------ecCCCCCCCCccceeeecHHHhH
Confidence 8888888888988999999999999999999996554 5999999998 2222222 11 788999
Q ss_pred HHhCCcceEeeCCeEEEecCCccceEEEcCCCcceeEEEEecCChhhhhhhhcC-CCeEEEEeecC-hHHHHHHHHHHHh
Q 022519 87 LLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG-VPTVSARFGTA-PFFWNWGMVTMQR 164 (296)
Q Consensus 87 ~~l~~p~~v~~~Gr~~~v~~~s~~r~vdFp~~vG~r~~y~i~~pD~~Tlp~~~g-i~~V~~r~g~~-~~~~~~ll~~l~~ 164 (296)
+++.+|+.+|+||+|++|+|+++.+.++||. +|...+|.++|+|+.||.++++ +.+++++++|. +.++++ +++|+.
T Consensus 176 ~e~~~p~~~~~~Gk~~~v~~~~~~~~~~~~~-~G~~~~y~~~~~el~sL~~~i~~~~~~~~~~t~r~~g~~~~-i~~L~~ 253 (389)
T COG1748 176 REYTRPARYWENGKWVEVDPLEEREVFEFPV-IGYGDVYAFYHDELRSLVKTIPGVVRTRFEMTFRYPGHLEV-IKALRD 253 (389)
T ss_pred HHhcCceEEEeCCEEEEecCcccccccccCC-CCceeEEecCCccHHHHHHhCcccceeeEEeecCcccHHHH-HHHHHH
Confidence 9999999999999999999999999999986 7999999999999999999997 78999999999 999998 468888
Q ss_pred hccccccccch--------hhhhhhhhhhhhhhhccccCCceeEEEEEEEe-cCCceEEE---Eeec---------CCcc
Q 022519 165 LFPAEYLRDRS--------KVQQLVQLFDPVVRAFDGIAGERVSMRVDLEC-TDGRNTVG---IFSH---------RRLS 223 (296)
Q Consensus 165 lg~~~lL~~~~--------~~~~l~~~~~~~~~~~~~~~g~~~~m~v~v~g-~~G~~~~~---~~~~---------~~~~ 223 (296)
+| |++.++ ++++++.++.......++ ..+.+.|.++|++ |||+.... .++| ..++
T Consensus 254 lG---ll~~~~v~~~~~i~p~eflk~vl~~~~s~~~~-~~d~t~i~v~v~G~kdG~~~~~~y~~~~~~~~~~~~~~~ais 329 (389)
T COG1748 254 LG---LLSREPVKVQQEIVPLEFLKAVLPDPLSLAPD-YKDVTVIGVEVKGTKDGRDKTVFYNVKDHAEAYSEVGSSAIS 329 (389)
T ss_pred cC---CCcccccccccccchHHHHHHhcccccccCCC-cCceEEEEEEEEEEEcCeeeEEEecchhhHHHhhccccceee
Confidence 86 555442 356666654333333332 3455689999996 69987633 3333 3478
Q ss_pred cccHHHHHHHHHHHHcCC-CCCcccCCcCCCCccHH
Q 022519 224 VSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIE 258 (296)
Q Consensus 224 ~~Tg~~aa~~A~~ll~G~-~~~Gv~~PE~~~g~~~~ 258 (296)
++||++|+++|++|++|+ ..+||++||++..+++.
T Consensus 330 ~ttg~pa~~~a~ll~~g~~~~~Gv~~~E~l~~~~~~ 365 (389)
T COG1748 330 YTTGVPAAIGAELLAEGEWETPGVVNPEELGPDPFL 365 (389)
T ss_pred hhccccHHHHHHHHHcCCCCcCcEecHHHhCCChhH
Confidence 999999999999999999 89999999999988864
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| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 296 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 6e-05
Identities = 60/368 (16%), Positives = 106/368 (28%), Gaps = 145/368 (39%)
Query: 2 RLQQFLKLDYAMSFLRSEKLYLLLC--------------C-------------FWI---- 30
RLQ +LKL A+ LR K +L+ C FW+
Sbjct: 133 RLQPYLKLRQALLELRPAK-NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 31 --------LILTDICY-MTVMAAEL------VRVARNESKGEPERL---RYYVR------ 66
+L + Y + +++ + + E RL + Y
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 67 ----------FSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFG 116
F+ IL T+ + ++ I+L+ +S L+ D
Sbjct: 252 NVQNAKAWNAFNL--------SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 117 KGIGRKDVFLLNLPEVRSAREVLGV-PTVSARFGTA----PFFW-NWGMVTMQRLFPAEY 170
K + K L+ REVL P + + W NW V +L
Sbjct: 304 KSLLLK---YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL----- 355
Query: 171 LRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVGTAI 230
+ ++ + + +P E M L +F S I
Sbjct: 356 ---TTIIESSLNVLEP---------AEYRKMFDRL---------SVF---PPSAH----I 387
Query: 231 AAFVLAVLEGATQPGVWF---PEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEP 287
+L+++ WF + + + L + S +VE +P
Sbjct: 388 PTILLSLI--------WFDVIKSDVMVVVNK-----LHKYS-------------LVEKQP 421
Query: 288 KELGLGIY 295
KE + I
Sbjct: 422 KESTISIP 429
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 296 | |||
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 99.97 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 99.91 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 99.84 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.4 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 99.38 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 99.24 |
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=245.74 Aligned_cols=234 Identities=16% Similarity=0.142 Sum_probs=182.7
Q ss_pred cccchhhhhhhhhhhhhhcccccccCCccHHHHHHHHHHHHhcccCCCCCcEEEEeeeeeeeecCCCCCCh-----hHHH
Q 022519 9 LDYAMSFLRSEKLYLLLCCFWILILTDICYMTVMAAELVRVARNESKGEPERLRYYVRFSYYTAGTGGAGP-----TILA 83 (296)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~~~~dPGlTn~lA~~aa~~l~~~~l~~ve~IdI~i~~~~~~~g~g~~G~-----~~~~ 83 (296)
++|+++|+..+.+...++....++|++||++|++++++++ +.++++++|+|+. +..+ +.|. =+.+
T Consensus 117 ~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~~~~~----~~~~~i~~i~i~~----~~gg--~~g~~~~~~~sp~ 186 (405)
T 4ina_A 117 FEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYAQK----HYFDEIHEIDILD----CNAG--DHGYPFATNFNPE 186 (405)
T ss_dssp BCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHHHHHH----HTCSEEEEEEEEE----EECC--BCSSSSCCSSCHH
T ss_pred hhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHHHHHH----hccCcccEEEEEE----ecCC--CCCccceeeeCHH
Confidence 4566666666666665666667778999999999999993 3467999999754 2121 2221 1467
Q ss_pred HHHHHhCCcceEeeCCeEEEecCCccceEEEcCCCcceeEEEEecCChhhhhhhhcC-CCeEEEEeecChHHHHHHHHHH
Q 022519 84 TSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG-VPTVSARFGTAPFFWNWGMVTM 162 (296)
Q Consensus 84 t~l~~l~~p~~v~~~Gr~~~v~~~s~~r~vdFp~~vG~r~~y~i~~pD~~Tlp~~~g-i~~V~~r~g~~~~~~~~ll~~l 162 (296)
++++++.+|+.+|+||+|+++||+++.+.++||. +|++.+|+++|||+.|++++++ +++|++|++|++.+.+.+ .+|
T Consensus 187 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~fp~-~G~~~~y~~~~~e~~tl~~~~~~~~~v~~~~~~~~~~~~~~-~~L 264 (405)
T 4ina_A 187 INLREVSSKGRYWENGEWIETEPMEIMQVWDYPE-VGPKDSYLLYHEELESLVRNIKGLKRIRFFMTFGQSYLTHM-RCL 264 (405)
T ss_dssp HHHHHTTSCEEEEETTEEEEESTTCCEEEEEETT-TEEEEEEEECCTHHHHHHHHSTTCCEEEEEEECCHHHHHHH-HHH
T ss_pred HHHHHhcCCcEEEECCEEEEecCCceeEEEECCC-CceeeEEEeCCCcHHHHHhhCCCcceEEeecccCHHHHHHH-HHH
Confidence 8899999999999999999999999999999996 9999999999999999999997 799999999999999884 577
Q ss_pred Hhhccccccccch---------hhhhhhhhhhhhhhhccccCCceeEEEEEEEe-cCCceE----EEEeecC--------
Q 022519 163 QRLFPAEYLRDRS---------KVQQLVQLFDPVVRAFDGIAGERVSMRVDLEC-TDGRNT----VGIFSHR-------- 220 (296)
Q Consensus 163 ~~lg~~~lL~~~~---------~~~~l~~~~~~~~~~~~~~~g~~~~m~v~v~g-~~G~~~----~~~~~~~-------- 220 (296)
+++| |++..+ ++++|+.++.....+.+. ..+...|+++++| +||++. +.+++|+
T Consensus 265 ~~lG---l~~~~~v~~~g~~v~p~~~l~~~l~~~~~~~~~-~~d~~~i~~~v~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T 4ina_A 265 ENVG---MLRIDEIEVNGCKVVPIQVLKALLPDPASLASR-TKGKTNIGCYIKGIKEGKARTIYIYNVCDHESCYREVNA 340 (405)
T ss_dssp HHHT---TTCCSCEEETTEEECHHHHHHHHSCCHHHHTTT-CBSEEEEEEEEEEEETTEEEEEEEEEEEEHHHHHHHHSS
T ss_pred HHcC---CCCCCceeeCCceecHHHHHHHhcchhhccCCC-CCCeEEEEEEEEEEECCeEEEEEEEEEeccccccccccc
Confidence 8886 444332 356666554333333332 3455789999996 799866 4567764
Q ss_pred -CcccccHHHHHHHHHHHHcCC-CCCcccCCcCCCCccHH
Q 022519 221 -RLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIE 258 (296)
Q Consensus 221 -~~~~~Tg~~aa~~A~~ll~G~-~~~Gv~~PE~~~g~~~~ 258 (296)
.++++||+|++++|++|++|+ ..+||+.||+++..|+.
T Consensus 341 ~a~~~ttg~p~~i~a~li~~G~~~~~Gv~~~e~~~~~~fl 380 (405)
T 4ina_A 341 QAISYTTGVPAMIGAKLMLEGKWSGKGVFNMEELDPDPFM 380 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTSSCCSEEEEGGGSCSHHHH
T ss_pred eEEEeccChhHHHHHHHHhCCccCCCceecccccCcHHHH
Confidence 368999999999999999999 89999999998765553
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| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 296 | |||
| d1e5qa2 | 267 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.53 |
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.53 E-value=0.019 Score=49.56 Aligned_cols=126 Identities=9% Similarity=-0.039 Sum_probs=78.5
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCcEEEEeeeeeeeecCCC--CCCh---hHHHHHHHHhCCcceEeeCCeEEEecC---
Q 022519 35 DICYMTVMAAELVRVARNESKGEPERLRYYVRFSYYTAGTG--GAGP---TILATSFLLLGEEVVAYNKGEEITLEP--- 106 (296)
Q Consensus 35 dPGlTn~lA~~aa~~l~~~~l~~ve~IdI~i~~~~~~~g~g--~~G~---~~~~t~l~~l~~p~~v~~~Gr~~~v~~--- 106 (296)
|||+.+++|..+.++++ +.-..|+++..+. ...-.+... ..+= =+.+-++....+|..+.+||+.++||+
T Consensus 2 dPGidhm~A~~~i~~~~-~~~g~i~~f~s~c-GGLp~p~~~~np~~YkfsWsp~gvi~~~~~~A~~~~~G~~~~v~~~~~ 79 (267)
T d1e5qa2 2 DPGIDHLYAIKTIEEVH-AAGGKIKTFLSYC-GGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPEL 79 (267)
T ss_dssp TTBHHHHHHHHHHHHHH-HTTCEEEEEEEEE-EEEECGGGCCSTTSCCBSSCHHHHHHHTTCCEEEEETTEEEEECGGGS
T ss_pred CCcHHHHHHHHHHHHHH-hcCCcEEEEEEEe-cCccCCCCCCCCccceEEeccchhHHHhcCcceeeeCCeEEEECCHHh
Confidence 89999999999998886 4444566666443 111000000 0110 055677888899999999999999999
Q ss_pred CccceEEEcCCCcceeEEEEecCChhhhhhhhcC---CCeEEEEeecChHHHHHHHHHHHhhc
Q 022519 107 YSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG---VPTVSARFGTAPFFWNWGMVTMQRLF 166 (296)
Q Consensus 107 ~s~~r~vdFp~~vG~r~~y~i~~pD~~Tlp~~~g---i~~V~~r~g~~~~~~~~ll~~l~~lg 166 (296)
+...+.++|.+ .+.-.+|. .-|-...-..++ |+++.-+.--.+.+... +..++.+|
T Consensus 80 ~~~~~~~~~~~-~~~~E~~p--nrdsl~y~~~y~~~~i~t~~rgTLRy~G~~~~-~~~l~~lG 138 (267)
T d1e5qa2 80 MATAKPYFIYP-GFAFVAYP--NRDSTPYKERYQIPEADNIVRGTLRYQGFPQF-IKVLVDIG 138 (267)
T ss_dssp GGGCEECCSST-TBCEEEEE--CSBCTTHHHHTTCTTCSEEEEEEEEETTHHHH-HHHHHHTT
T ss_pred hhhceeeeccC-CcceEEEe--cCCCcchhhhhcCcchhhhhhhhhcccchHHH-HHHHHHHH
Confidence 55667788864 45555544 335443333344 55655455555666655 34666665
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