Citrus Sinensis ID: 022615

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Secondary Structure (PSIPRED)
cccccccccHHHHcccccHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHcccccccEEEccccccccccccccccHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccEEEEcccccHHHHHHHHHccccccccccccHHHHHHHHHHHcccEEEccccccccccccccccccEEEcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHccccHHHHHHHHHHHHHHHHHccEEcccHHHHHHHHHcccccHHcEEEEcccccHHHcccccccHHHHHHHccccccccEEEEEEccccHccHHHHHHHHHHccccEEEEEccccHHHHHHHHHccccEEEEEEccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHccccEEEEccccccccccccccccEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
msyhthvpvyiprytfswlvKPMWLVIKFLHRaadltlvpsvaIGKDLEAARVTAANKIRIwkkgvdsesfhprfrssemrwrlsngepdkplivhVGRLGVEKSLDFLKRVMDRLPEARiafigdgpyrEELEKMFTGMPAVFTGMLLGEELSQayasgdvfvmpseseTLGLVVLEAMssgipvvgvraggipdiipedqdgkigylfnpgdlddclskleplLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAkrifpsaevnys
Flexible Loop (DISEMBL)
msyhthvpvyiprYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAankiriwkkgvdsesfhprfrssemrwrlsngepdkplivhvgrlgveKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWlakrifpsaevnys
Low Complexity Region (SEG)
MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered region (IsUnstruct)
***HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD***********************KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE*********MEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFP*******
Disordered Region (DISOPRED)
MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA*****************LAKRI*********
Disordered Region (DISEMBL)
MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered Region (DISPRO)
*SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEV***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
Q8NT41	413	GDP-mannose-dependent alp	yes	no	0.799	0.569	0.354	2e-27
O06423	378	GDP-mannose-dependent alp	yes	no	0.785	0.611	0.362	2e-26
A0R043	382	GDP-mannose-dependent alp	yes	no	0.615	0.473	0.338	2e-20
P0CF99	381	GDP-mannose-dependent alp	no	no	0.551	0.425	0.356	8e-20
A5U3B9	381	GDP-mannose-dependent alp	no	no	0.551	0.425	0.356	8e-20
A0QRG8	375	GDP-mannose-dependent alp	no	no	0.789	0.618	0.331	2e-19
Q59002	390	Uncharacterized glycosylt	yes	no	0.683	0.515	0.308	9e-18
Q4JSW2	419	D-inositol 3-phosphate gl	no	no	0.744	0.522	0.294	1e-14
O53522	385	GDP-mannose-dependent alp	no	no	0.585	0.446	0.310	2e-14
C7MSY6	431	D-inositol 3-phosphate gl	no	no	0.690	0.470	0.293	6e-14

>sp|Q8NT41|MGTA_CORGL GDP-mannose-dependent alpha-mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=mgtA PE=1 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 3   YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
           Y T V  +  RY  + L    W  IK +H     TL PS      ++  R    N I  W
Sbjct: 125 YQTDVAGFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIFHW 181

Query: 63  KKGVDSESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
            +GVDS+ FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  + +
Sbjct: 182 ARGVDSKRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SDIQ 237

Query: 121 IAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA 179
           +  +GDGP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + EA
Sbjct: 238 LVIVGDGPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQEA 294

Query: 180 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 239
            +SG+P +G RAGG  D+I E   G  G L +  D  + L      + +      M  AA
Sbjct: 295 QASGVPTIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCAAA 351

Query: 240 RQEMEKYDWRA 250
            + ++   W A
Sbjct: 352 WEGVKDKTWEA 362

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|O06423|MGTA_MYCTU GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium tuberculosis GN=mgtA PE=1 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 125/248 (50%), Gaps = 17/248 (6%)

Query: 3   YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
           Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +    ++  W
Sbjct: 123 YQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIP---RVHRW 179

Query: 63  KKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 121
            +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +       R+
Sbjct: 180 ARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GAVRL 235

Query: 122 AFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
             +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV EA+
Sbjct: 236 VIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQEAL 292

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           +SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  AAR
Sbjct: 293 ASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL--AAR 347

Query: 241 QEMEKYDW 248
           + +    W
Sbjct: 348 RSVLGRSW 355

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A0R043|PIMB_MYCS2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=pimB PE=1 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD----RLPEAR 120
           GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct: 167 GVDTDRFAPD-PDARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query: 121 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 169
           +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct: 226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query: 170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 229
           E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct: 286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query: 230 ELRETMGQAARQ-EMEKYDWR 249
                MG A R   ++ + WR
Sbjct: 343 RRAAAMGVAGRHWALDNWQWR 363

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1) or to the position 6 of a monoacyl phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (AcPIM1) to generate a mononacyl phosphatidyl-myo-inositol dimannoside (AcPIM2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|P0CF99|PIMC_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimC PE=1 SV=1

 Score = 97.8 bits (242), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 91/171 (53%), Gaps = 9/171 (5%)

Query: 37  TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 96
           T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct: 149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query: 97  VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 152
            GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct: 205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query: 153 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 202
            ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D 
Sbjct: 265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITADS 315

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|A5U3B9|PIMC_MYCTA GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pimC PE=3 SV=1

 Score = 97.8 bits (242), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 91/171 (53%), Gaps = 9/171 (5%)

Query: 37  TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 96
           T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct: 149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query: 97  VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 152
            GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct: 205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query: 153 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 202
            ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D 
Sbjct: 265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITADS 315

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (taxid: 419947)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|A0QRG8|MGTA_MYCS2 GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=mgtA PE=3 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 119/247 (48%), Gaps = 15/247 (6%)

Query: 3   YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
           + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+    ++  W
Sbjct: 120 FQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIP---RVHRW 176

Query: 63  KKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 121
            +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  +  R  + ++
Sbjct: 177 GRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLAVLAAR-DDLQL 232

Query: 122 AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS 181
             +GDG  R +L+ +     AVFTG L G  L+ AYAS DVFV P E ET    V EAM+
Sbjct: 233 VIVGDGVDRVKLQTVLP--TAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQEAMA 290

Query: 182 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
           SG+PV+   AGG  D++      + G L +    +  L      L  +  R   G AAR+
Sbjct: 291 SGVPVIAPDAGGPRDLV---APCRTGLLLDVDGFECALPAAVTHLIAE--RRRYGIAARR 345

Query: 242 EMEKYDW 248
            +    W
Sbjct: 346 SVLARTW 352

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1

 Score = 90.9 bits (224), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 13/214 (6%)

Query: 54  TAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKR 111
           T  +K+++   G++   F       E + +R S G + D+ +I+ VGRL  +K +++L R
Sbjct: 169 TPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMILFVGRLTYQKGIEYLIR 228

Query: 112 VMDRLPE---ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFV 164
            M ++ E   A++   G G  R+ LE +   +      VF G + G+ L + Y S DV V
Sbjct: 229 AMPKILERHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSADVVV 288

Query: 165 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 224
           +PS  E  G+V LEAM++G PVV    GG+ +II  + +G   Y  NP   D     ++ 
Sbjct: 289 IPSVYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNP---DSIAWGVDR 345

Query: 225 LLYNQELRETMGQAARQEM-EKYDWRAATRTIRN 257
           +L +   RE +   A++++ EKY W    +   N
Sbjct: 346 VLSDWGFREYIVNNAKKDVYEKYSWDNIAKETVN 379

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q4JSW2|MSHA_CORJK D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium jeikeium (strain K411) GN=mshA PE=3 SV=1

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 19/238 (7%)

Query: 34  ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL 93
           ADL +V +    +DL          IR+   G D + F P    +  R R   G P +  
Sbjct: 165 ADLLIVNTDQEVQDLIEGYDATTCAIRVVPPGADVDRFTPGSDRATERSRRELGIPFRTK 224

Query: 94  IV-HVGRL----GVEKSLDFLKRVMDRLPEARIAFI----GDGPYREELEKMFT-----G 139
           ++  VGRL    G +  L  +  ++DR P+ ++A +      G    ELE++       G
Sbjct: 225 VIGFVGRLQRLKGPQVLLRAVAELLDRHPQQQLAVVICGGSSGAGGNELERLQLLAEELG 284

Query: 140 MPAV--FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 197
           +     F      EEL   Y + D+  +PS +E+ GLV LEA + G PVV  R GG+P  
Sbjct: 285 ISRCVRFLAPRPPEELVGVYRAADIVAVPSYNESFGLVALEAQACGTPVVATRTGGLPIA 344

Query: 198 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI 255
           +     GK G L +  D  D    L  L+ + +LR  MG+ A     K+ W+A+   +
Sbjct: 345 V---DGGKSGLLVDGHDPSDWADALGKLVLDDDLRIAMGEYAPSHAAKFSWQASAEAL 399

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium jeikeium (strain K411) (taxid: 306537)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|O53522|PIMB_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimB PE=1 SV=2

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 21/193 (10%)

Query: 65  GVDSESFHPRFRS-SEMRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEA 119
           GVD++ F P   + +E+R R   GE  +P +V + RL    G +  +  L  +  R+  A
Sbjct: 172 GVDTDRFRPDPAARAELRKRYRLGE--RPTVVCLSRLVPRKGQDTLVTALPSIRRRVDGA 229

Query: 120 RIAFIGDGPYREELEKMF--TGMP--AVFTGMLLGEELSQAYASGDVFVMPSES------ 169
            +  +G GPY E L K+    G+     FTG +  +EL   +A  DVF MP  +      
Sbjct: 230 ALVIVGGGPYLETLRKLAHDCGVADHVTFTGGVATDELPAHHALADVFAMPCRTRGAGMD 289

Query: 170 -ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 228
            E LG+V LEA ++G+PV+   +GG P+ +   Q  K G + +   +D     +  LL +
Sbjct: 290 VEGLGIVFLEASAAGVPVIAGNSGGAPETV---QHNKTGLVVDGRSVDRVADAVAELLID 346

Query: 229 QELRETMGQAARQ 241
           ++    MG A R+
Sbjct: 347 RDRAVAMGAAGRE 359

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|C7MSY6|MSHA_SACVD D-inositol 3-phosphate glycosyltransferase OS=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) GN=mshA PE=3 SV=1

 Score = 78.6 bits (192), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 29/232 (12%)

Query: 44  IGKDLEAARV-----TAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHV 97
           +  D+EA ++      A + +R    GVD E F P  R++    R + G P D  ++   
Sbjct: 183 VNTDVEADQLVRLYDAAPDAVRTVSPGVDLERFRPGSRAAA---RAALGVPADAVVLAFA 239

Query: 98  GRLGVEKSLDFLKR----VMDRLPEAR---IAFIGDGPYREELEKMFTGMP-AVFTGM-- 147
           GR+   K+ D L R    ++ R P  R   +  +  GP    LE+  + M  AV  G+  
Sbjct: 240 GRIQPLKAPDVLLRATAALVRRDPGLRRRLVVLVAGGPSGSGLEQPRSLMDLAVELGIDD 299

Query: 148 -------LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 200
                    G++L   Y + DV  +PS +E+ GLV LEA + G PVV  R GG+P  +  
Sbjct: 300 VTRFLPPQGGQDLVNVYRAADVVAVPSHNESFGLVALEAQACGTPVVAARVGGLPVAV-- 357

Query: 201 DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAAT 252
             D   G L    D +D    L  +    E+R  + + AR+  +++ WR  T
Sbjct: 358 -DDEVSGLLVPTHDTEDWADALARVALRPEVRAVLSRGAREHAQRFSWRRTT 408

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) (taxid: 471857)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
449439908	515	PREDICTED: GDP-mannose-dependent alpha-m	0.996	0.568	0.887	1e-154
224090935	433	predicted protein [Populus trichocarpa]	0.986	0.669	0.9	1e-153
359481678	519	PREDICTED: GDP-mannose-dependent alpha-m	0.996	0.564	0.853	1e-150
224140379	429	predicted protein [Populus trichocarpa]	0.989	0.678	0.883	1e-150
255581077	452	glycosyltransferase, putative [Ricinus c	0.972	0.632	0.902	1e-150
297740238	436	unnamed protein product [Vitis vinifera]	0.996	0.672	0.853	1e-149
356496170	523	PREDICTED: GDP-mannose-dependent alpha-m	0.993	0.558	0.874	1e-149
356523263	448	PREDICTED: GDP-mannose-dependent alpha-m	0.993	0.651	0.866	1e-148
356568054	515	PREDICTED: GDP-mannose-dependent alpha-m	0.996	0.568	0.860	1e-148
356504282	517	PREDICTED: GDP-mannose-dependent alpha-m	0.986	0.560	0.875	1e-148

>gi|449439908|ref|XP_004137727.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus] gi|449483456|ref|XP_004156597.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 260/293 (88%), Positives = 277/293 (94%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS AIGKDLEA RVTAANKIR
Sbjct: 222 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSAAIGKDLEAERVTAANKIR 281

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDS SFHPRFRS EMR RLS GEPDKPLIVHVGR+GVEKSLDFLKR+MDRLPEAR
Sbjct: 282 LWNKGVDSVSFHPRFRSHEMRLRLSGGEPDKPLIVHVGRIGVEKSLDFLKRIMDRLPEAR 341

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IA +GDGPYREELEK+FTGMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 342 IAIVGDGPYREELEKIFTGMPAVFTGMLSGEELSQAYASGDVFVMPSESETLGLVVLEAM 401

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPV+G RAGG+PDIIP +QDGKIGYL+ PGD+DDCLSKL+PLL N+ELRETMG+AAR
Sbjct: 402 SSGIPVIGARAGGVPDIIPPEQDGKIGYLYTPGDVDDCLSKLKPLLENRELRETMGKAAR 461

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 293
           +EMEKYDW+AATRTIRNEQYNAAIWFWRKKRAQ LRP QWL KRIFPS+EV+Y
Sbjct: 462 EEMEKYDWKAATRTIRNEQYNAAIWFWRKKRAQFLRPFQWLFKRIFPSSEVSY 514

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090935|ref|XP_002309122.1| predicted protein [Populus trichocarpa] gi|222855098|gb|EEE92645.1| predicted protein [Populus trichocarpa]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/290 (90%), Positives = 276/290 (95%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMW+++KFLHRAADLTLVPS AIG+DLEAARVTAANKIR
Sbjct: 144 MSYHTHVPVYIPRYTFSWLVKPMWMILKFLHRAADLTLVPSAAIGRDLEAARVTAANKIR 203

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRFRS+EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLKRVMDRLP AR
Sbjct: 204 LWNKGVDSESFHPRFRSNEMRMRLSNGEPEKPLIVHVGRLGVEKSLDFLKRVMDRLPGAR 263

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELEKMFTG+PAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 264 IAFIGDGPYREELEKMFTGIPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAM 323

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVV  RAGGIPDIIP +QDGK G+LFNPGDLDDCLSKLEPLL NQELRETMG+AAR
Sbjct: 324 SSGIPVVAARAGGIPDIIPPEQDGKTGFLFNPGDLDDCLSKLEPLLDNQELRETMGKAAR 383

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAE 290
            +MEKYDW+AAT+ IRNEQYNAAIWFWRKKRAQLLRPIQWL KR+FPS E
Sbjct: 384 HDMEKYDWKAATKKIRNEQYNAAIWFWRKKRAQLLRPIQWLVKRLFPSPE 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481678|ref|XP_002278868.2| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase [Vitis vinifera]

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/293 (85%), Positives = 275/293 (93%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+AARVTAAN+IR
Sbjct: 226 MSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQAARVTAANRIR 285

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFLKRVMDRLPEAR
Sbjct: 286 LWNKGVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFLKRVMDRLPEAR 345

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 346 IAFIGDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAM 405

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSG+PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ ELRET+G+AAR
Sbjct: 406 SSGVPVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSHELRETIGKAAR 465

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 293
           +EMEKYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + E+NY
Sbjct: 466 EEMEKYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTPEINY 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140379|ref|XP_002323560.1| predicted protein [Populus trichocarpa] gi|222868190|gb|EEF05321.1| predicted protein [Populus trichocarpa]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 257/291 (88%), Positives = 272/291 (93%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMW++IKFLHRAADLTLVPS AIG+DLEAARVTAANKIR
Sbjct: 139 MSYHTHVPVYIPRYTFSWLVKPMWMIIKFLHRAADLTLVPSAAIGRDLEAARVTAANKIR 198

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRFRS EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLKRVMDRLP AR
Sbjct: 199 VWNKGVDSESFHPRFRSHEMRMRLSNGEPEKPLIVHVGRLGVEKSLDFLKRVMDRLPGAR 258

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IA IGDGPYREELEKMFTGMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 259 IAIIGDGPYREELEKMFTGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAM 318

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVVG RAGGIPDIIP + DGK G+LFNPGDLDDCLSKLEPLL NQELRET+G+AAR
Sbjct: 319 SSGIPVVGARAGGIPDIIPPELDGKTGFLFNPGDLDDCLSKLEPLLDNQELRETIGKAAR 378

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEV 291
           Q+ EKYDW+AAT+ IRNEQY+AAIWFWR+ RAQL RPIQWL KR+FP  EV
Sbjct: 379 QDTEKYDWKAATKKIRNEQYSAAIWFWRENRAQLFRPIQWLVKRLFPIPEV 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581077|ref|XP_002531354.1| glycosyltransferase, putative [Ricinus communis] gi|223529052|gb|EEF31038.1| glycosyltransferase, putative [Ricinus communis]

 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/288 (90%), Positives = 271/288 (94%), Gaps = 2/288 (0%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPSVAIGKDL+AARVTAANKIR
Sbjct: 144 MSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSVAIGKDLQAARVTAANKIR 203

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRF S EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP AR
Sbjct: 204 LWNKGVDSESFHPRFCSHEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPGAR 263

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELE+MF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 264 IAFIGDGPYREELEEMFSGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAM 323

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVVG RAGGIPDIIP +Q+GK G+LFNPGDLDDCL KLEPLL N ELR+TMG+AAR
Sbjct: 324 SSGIPVVGARAGGIPDIIPPEQEGKTGFLFNPGDLDDCLGKLEPLLNNCELRKTMGKAAR 383

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWL--AKRIF 286
           +EMEKYDWRAATR IRNEQYNAAIWFWRKKRAQ LRPIQWL   KRI 
Sbjct: 384 EEMEKYDWRAATRKIRNEQYNAAIWFWRKKRAQFLRPIQWLNMGKRIL 431

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740238|emb|CBI30420.3| unnamed protein product [Vitis vinifera]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 250/293 (85%), Positives = 275/293 (93%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+AARVTAAN+IR
Sbjct: 143 MSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQAARVTAANRIR 202

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFLKRVMDRLPEAR
Sbjct: 203 LWNKGVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFLKRVMDRLPEAR 262

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 263 IAFIGDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAM 322

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSG+PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ ELRET+G+AAR
Sbjct: 323 SSGVPVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSHELRETIGKAAR 382

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 293
           +EMEKYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + E+NY
Sbjct: 383 EEMEKYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTPEINY 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496170|ref|XP_003516943.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  531 bits (1369), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/294 (87%), Positives = 271/294 (92%), Gaps = 2/294 (0%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI 
Sbjct: 229 MSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKIC 288

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRF+S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEAR
Sbjct: 289 LWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEAR 348

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 349 IAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAM 408

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVVG RAGG+PDIIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR
Sbjct: 409 SSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAAR 468

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIF--PSAEVN 292
            EMEKYDWRAAT+ IRNE YNAAIWFWRKKRAQLLRP QWLA+RIF  P  E N
Sbjct: 469 LEMEKYDWRAATQKIRNENYNAAIWFWRKKRAQLLRPFQWLAQRIFQSPDPEAN 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523263|ref|XP_003530260.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 253/292 (86%), Positives = 269/292 (92%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI  DL AARVTAANKIR
Sbjct: 157 MSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIR 216

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSE FHP++RS EMR RLSNGEPDKPLIVHVGRLGVEKSLDFLKR++DRLP+AR
Sbjct: 217 LWNKGVDSEKFHPKYRSHEMRLRLSNGEPDKPLIVHVGRLGVEKSLDFLKRLLDRLPDAR 276

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAF+GDGPYREELEKMF GMPAVFTGML+GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 277 IAFVGDGPYREELEKMFEGMPAVFTGMLVGEELSQAYASGDVFVMPSESETLGLVVLEAM 336

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVV   AGGIPDIIP DQDGK  YL+NPGD +DCLSKL PLL N+ELRETMG+AAR
Sbjct: 337 SSGIPVVAACAGGIPDIIPVDQDGKTSYLYNPGDFEDCLSKLRPLLLNKELRETMGKAAR 396

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN 292
           +EMEKYDW+ ATR IRNEQYNAAIWFWRKKRAQLLRP QWLAKR FPS +VN
Sbjct: 397 EEMEKYDWKEATRKIRNEQYNAAIWFWRKKRAQLLRPFQWLAKRFFPSPQVN 448

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568054|ref|XP_003552228.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/293 (86%), Positives = 269/293 (91%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI  DL AARVTAANKIR
Sbjct: 222 MSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIR 281

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSE FHP++RS EMR RLSN EPDKPLI+HVGRLGVEKSLDFLKR+MDRLP+AR
Sbjct: 282 LWNKGVDSEKFHPKYRSHEMRLRLSNDEPDKPLIIHVGRLGVEKSLDFLKRLMDRLPDAR 341

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAF+GDGPYREELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLG VVLEAM
Sbjct: 342 IAFVGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAM 401

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVV  RAGGIPDIIP DQDGK  YL++PGDL+DCLSKL PLL+N+ELRETMG+AAR
Sbjct: 402 SSGIPVVAARAGGIPDIIPADQDGKTSYLYDPGDLEDCLSKLRPLLHNKELRETMGKAAR 461

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 293
           +EMEKYDW+AATR IRNEQYNAAIWFWRKKRAQLLRP Q LAK  FPS +VNY
Sbjct: 462 EEMEKYDWKAATRKIRNEQYNAAIWFWRKKRAQLLRPFQRLAKHFFPSPQVNY 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504282|ref|XP_003520926.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 269/290 (92%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI 
Sbjct: 223 MSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKIC 282

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRF+S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEAR
Sbjct: 283 LWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEAR 342

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           IAFIGDGPYREELEKMF GMPAVFTGML GEELS+AYASGDVFVMPSESETLGLVVLEAM
Sbjct: 343 IAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSEAYASGDVFVMPSESETLGLVVLEAM 402

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           SSGIPVVG RAGG+PDIIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR
Sbjct: 403 SSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAAR 462

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAE 290
            EMEKYDWRAATR IRNE Y AAIWFWRKKRAQLLRP QWLA+ IFPS +
Sbjct: 463 LEMEKYDWRAATRKIRNENYKAAIWFWRKKRAQLLRPFQWLAQPIFPSPD 512

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2150059	510	SQD2 "sulfoquinovosyldiacylgly	0.993	0.572	0.784	1.1e-126
TIGR_CMR|BA_5012	380	BA_5012 "glycosyl transferase,	0.812	0.628	0.338	2.3e-30
UNIPROTKB|Q8NT41	413	mgtA "GDP-mannose-dependent al	0.799	0.569	0.354	1.5e-28
UNIPROTKB|O06423	378	mgtA "GDP-mannose-dependent al	0.785	0.611	0.362	5e-28
UNIPROTKB|A0QRG8	375	mgtA "GDP-mannose-dependent al	0.653	0.512	0.367	2.6e-24
UNIPROTKB|A0R043	382	pimB "GDP-mannose-dependent al	0.632	0.486	0.341	1.6e-20
UNIPROTKB|A5U3B9	381	pimC "GDP-mannose-dependent al	0.547	0.422	0.358	2e-20
UNIPROTKB|P0CF99	381	pimC "GDP-mannose-dependent al	0.547	0.422	0.358	2e-20
TIGR_CMR|CHY_1041	380	CHY_1041 "glycosyl transferase	0.857	0.663	0.277	5.2e-18
UNIPROTKB|Q65CC7	386	kanE "Glycosyltransferase KanE	0.799	0.608	0.273	9.9e-15

TAIR|locus:2150059 SQD2 "sulfoquinovosyldiacylglycerol 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
 Identities = 229/292 (78%), Positives = 262/292 (89%)

Query:     1 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
             MSYHTHVPVYIPRYTFSWLVKPMW +I+FLHRAADLTLVPS AIGKDL AA  TAAN++R
Sbjct:   218 MSYHTHVPVYIPRYTFSWLVKPMWSIIRFLHRAADLTLVPSAAIGKDLIAAGATAANQLR 277

Query:    61 IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
             +W KGVDSESF+PRFRS EMR RLSNGEP+KPL++HVGR+GVEKSL+ LK VMD+LPEAR
Sbjct:   278 LWNKGVDSESFNPRFRSQEMRIRLSNGEPEKPLVIHVGRIGVEKSLELLKSVMDKLPEAR 337

Query:   121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
             IAFIGDGPY+E+LEK+FTGMPAVFTG L G+ELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct:   338 IAFIGDGPYKEDLEKLFTGMPAVFTGTLQGDELSQAYASGDVFVMPSESETLGLVVLEAM 397

Query:   181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
             SSG+PVV  RAGGIPDIIPEDQ+GK G+LFNPGD++DC++KL  LL+++E RE +G+AAR
Sbjct:   398 SSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAAR 457

Query:   241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN 292
             +E EKYDWRAAT  IRNEQY+AAIWFWRKK+  +L PI WL KR+FP  E N
Sbjct:   458 EETEKYDWRAATTKIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPEGN 509

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0008194 "UDP-glycosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA;IMP

GO:0046506 "sulfolipid biosynthetic process" evidence=TAS

GO:0046510 "UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TIGR_CMR|BA_5012 BA_5012 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 85/251 (33%), Positives = 128/251 (50%)

Query:     2 SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 61
             SYHT    Y+  Y   +L   +W  +K+ H       VPS    + L   +      + I
Sbjct:   114 SYHTDFDAYLRYYKIEFLSNMLWNYLKWFHSHMQKNFVPSP---ETLHQLKHKGFQALSI 170

Query:    62 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR- 120
             W +GVD   FHP + ++E+ +R       K ++ +VGR+  EK +D L+ ++ +    R 
Sbjct:   171 WGRGVDCNLFHPAY-NTEI-FRKKYNITAKYVLSYVGRITPEKDIDTLQNLIVKSAHTRN 228

Query:   121 -IAFI--GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 177
              I ++  GDGP    L +        FTG L G +L++AYA  ++ V PS +ET G VVL
Sbjct:   229 DIHWLIAGDGPLATSLREAVPKTNVTFTGYLQGVDLAEAYACSNMMVFPSATETFGNVVL 288

Query:   178 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 237
             E+++ G PV+G  +GG+ +II    DGK G L  P + D  LS +  LL N+E  E MG 
Sbjct:   289 ESLACGTPVIGANSGGVKNIIT---DGKTGVLCPPKNEDVFLSSIYSLLQNEEKLEQMGI 345

Query:   238 AARQEMEKYDW 248
             AA    +   W
Sbjct:   346 AASSYAKSKSW 356

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|Q8NT41 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Corynebacterium glutamicum ATCC 13032 (taxid:196627)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 89/251 (35%), Positives = 124/251 (49%)

Query:     3 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
             Y T V  +  RY  + L    W  IK +H     TL PS      ++  R    N I  W
Sbjct:   125 YQTDVAGFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIFHW 181

Query:    63 KKGVDSESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
              +GVDS+ FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  + +
Sbjct:   182 ARGVDSKRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SDIQ 237

Query:   121 IAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA 179
             +  +GDGP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + EA
Sbjct:   238 LVIVGDGPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQEA 294

Query:   180 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 239
              +SG+P +G RAGG  D+I E   G  G L +  D  + L      + +      M  AA
Sbjct:   295 QASGVPTIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCAAA 351

Query:   240 RQEMEKYDWRA 250
              + ++   W A
Sbjct:   352 WEGVKDKTWEA 362

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

UNIPROTKB|O06423 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 90/248 (36%), Positives = 125/248 (50%)

Query:     3 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
             Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +   ++   W
Sbjct:   123 YQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIPRVHR---W 179

Query:    63 KKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 121
              +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +       R+
Sbjct:   180 ARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GAVRL 235

Query:   122 AFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
               +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV EA+
Sbjct:   236 VIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQEAL 292

Query:   181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
             +SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  AAR
Sbjct:   293 ASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL--AAR 347

Query:   241 QEMEKYDW 248
             + +    W
Sbjct:   348 RSVLGRSW 355

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0040007 "growth" evidence=IMP

UNIPROTKB|A0QRG8 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 75/204 (36%), Positives = 107/204 (52%)

Query:     3 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
             + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+   ++   W
Sbjct:   120 FQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIPRVHR---W 176

Query:    63 KKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 121
              +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  V+    + ++
Sbjct:   177 GRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLA-VLAARDDLQL 232

Query:   122 AFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
               +GDG  R +L+   T +P AVFTG L G  L+ AYAS DVFV P E ET    V EAM
Sbjct:   233 VIVGDGVDRVKLQ---TVLPTAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQEAM 289

Query:   181 SSGIPVVGVRAGGIPDIIPEDQDG 204
             +SG+PV+   AGG  D++   + G
Sbjct:   290 ASGVPVIAPDAGGPRDLVAPCRTG 313

GO:0000030 "mannosyltransferase activity" evidence=ISS

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

UNIPROTKB|A0R043 pimB "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 244 (91.0 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 71/208 (34%), Positives = 105/208 (50%)

Query:    65 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD----RLPEAR 120
             GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct:   167 GVDTDRFAPD-PDARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query:   121 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 169
             +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct:   226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query:   170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 229
             E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct:   286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query:   230 ELRETMGQAARQ-EMEKYDWRAATRTIR 256
                  MG A R   ++ + WR  TR  R
Sbjct:   343 RRAAAMGVAGRHWALDNWQWR--TRGAR 368

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

UNIPROTKB|A5U3B9 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis H37Ra (taxid:419947)]

 Score = 243 (90.6 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:    37 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 96
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:    97 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 152
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   153 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 201
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=ISS

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=ISS

UNIPROTKB|P0CF99 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 243 (90.6 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:    37 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 96
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:    97 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 152
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   153 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 201
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0047264 "heteroglycan alpha-mannosyltransferase activity" evidence=IDA

TIGR_CMR|CHY_1041 CHY_1041 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 222 (83.2 bits), Expect = 5.2e-18, P = 5.2e-18
 Identities = 76/274 (27%), Positives = 132/274 (48%)

Query:     2 SYHTHVPVYIPRYTFSWLVK---PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK 58
             +YHT    Y+  + F+         W  ++F ++ + + + P+  I +D    +      
Sbjct:   113 TYHTLYEEYVHYFPFARKTARAVTSWYTLQFANKCSAV-ICPTETI-RDYLCQKGLKTRS 170

Query:    59 IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMD 114
               I   G+D E F  +  SS ++  LS     K + + VGR+  EK++DFL    + V  
Sbjct:   171 AVI-PTGIDLEPFS-KADSSWLKTTLSL--KGKKVCLFVGRVAPEKNVDFLLESFRIVAS 226

Query:   115 RLPEARIAFIGDGP----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESE 170
              L +  +  +G GP    Y+++ E++  G    F G +  E++   YA  D+F+ PS +E
Sbjct:   227 TLNDVVLVIVGGGPELPHYQKKAEELGLGNSVKFIGPVPPEKVPLFYAGADLFLFPSVTE 286

Query:   171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE 230
             T GLV  EA ++G+P VGVRA G   ++    DG  G+L  P   +    K+  LL ++ 
Sbjct:   287 TQGLVFAEAKAAGLPAVGVRAFGSKSMV---FDGVDGFLTGPNPREYA-EKVILLLRDEA 342

Query:   231 LRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 264
             LR+   Q AR+  + +  +  T  +  + Y + I
Sbjct:   343 LRKLFSQNARKNAQNFS-KEYTARLMYDLYQSLI 375

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|Q65CC7 kanE "Glycosyltransferase KanE" [Streptomyces kanamyceticus (taxid:1967)]

 Score = 204 (76.9 bits), Expect = 9.9e-15, P = 9.9e-15
 Identities = 69/252 (27%), Positives = 115/252 (45%)

Query:    12 PRYTFSWLVKPM--WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS- 68
             P   F  +  P+  W     + +AA + ++   A  +    A++ A    R+     D  
Sbjct:   127 PTTLFERVTDPIAKWAERHAVRKAAAVLMLTDRARDEMRRKAQLPAERVHRLAYLASDQF 186

Query:    69 ESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP----EARIAFI 124
             +      R +E+R R   G  D+P++++VGR+  EK +++       L     + +    
Sbjct:   187 KDADTEARRAELRERY--GLDDRPIVLYVGRIAAEKGVEYYIEAAAELTRRGRDCQFVIA 244

Query:   125 GDGPYREELEKMF--TGMP--AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
             GDGP R +LEK+    G+      TG +  E +    + G++ V+PS  E LG+V+LE M
Sbjct:   245 GDGPARPDLEKLIGARGLRDRVTITGFMSHEFIPSMISLGELVVLPSRYEELGIVILECM 304

Query:   181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ-AA 239
             +   P+V     G+  +I   +DG  G +  P    +    +E LL + ELRE M + AA
Sbjct:   305 TMRRPLVAHDVNGVNKLI---EDGTTGIVVPPFRTPEMADAVERLLDDPELRERMAENAA 361

Query:   240 RQEMEKYDWRAA 251
                  KY   AA
Sbjct:   362 PLPAAKYSLSAA 373

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IDA

GO:1901133 "kanamycin biosynthetic process" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.246	LOW CONFIDENCE prediction!
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.VI.1497.1	UDP-sulfoquinovose-DAG sulfoquinovosyltransferase (433 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_VI1540	UDP-sulfoquinovose synthase (EC-3.13.1.1) (483 aa)	•			•		•	•		0.979
	eugene3.00181095	1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (474 aa)				•		•	•		0.908
	fgenesh4_pm.C_scaffold_152000030	1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (411 aa)				•		•	•		0.908
	eugene3.00061974	1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (537 aa)						•	•		0.905
	estExt_fgenesh4_pm.C_LG_XVIII0180	1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (537 aa)						•	•		0.905
	gw1.XVI.1394.1	hypothetical protein (823 aa)						•			0.899
	gw1.III.811.1	phosphatidylcholine-sterol O-acyltransferase (EC-2.3.1.20) (647 aa)						•			0.899
	gw1.66.160.1	phosphatidylcholine-sterol O-acyltransferase (EC-2.3.1.20) (636 aa)						•			0.899
	gw1.145.33.1	acyl-CoA-diacylglycerol acyltransferase (EC-2.3.1.20) (422 aa)						•			0.899
	fgenesh4_pg.C_LG_I001065	phosphatidylcholine-sterol O-acyltransferase (EC-2.3.1.20) (661 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	0.0
cd03814	364	cd03814, GT1_like_2, This family is most closely r	6e-93
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	2e-52
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	1e-51
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	5e-40
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	6e-35
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	4e-33
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	9e-33
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	1e-31
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	3e-31
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	2e-30
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	2e-29
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	3e-29
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	2e-28
cd04962	371	cd04962, GT1_like_5, This family is most closely r	8e-28
cd03795	357	cd03795, GT1_like_4, This family is most closely r	3e-27
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	2e-26
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	3e-26
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	3e-26
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	2e-25
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	3e-25
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	5e-25
cd03813	475	cd03813, GT1_like_3, This family is most closely r	8e-25
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	5e-23
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	5e-22
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	1e-19
cd03791	476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	4e-19
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	6e-18
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	7e-18
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	1e-17
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	1e-17
cd04949	372	cd04949, GT1_gtfA_like, This family is most closel	2e-17
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	2e-17
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	8e-16
COG0297	487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	8e-16
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	2e-15
TIGR02095	473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	3e-15
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	1e-14
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	4e-13
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	6e-12
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	9e-12
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	4e-11
cd04955	363	cd04955, GT1_like_6, This family is most closely r	5e-11
PRK00654	466	PRK00654, glgA, glycogen synthase; Provisional	1e-10
TIGR02472	439	TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas	2e-10
cd03818	396	cd03818, GT1_ExpC_like, This family is most closel	5e-10
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	5e-10
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	7e-10
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	1e-09
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	3e-09
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	2e-08
TIGR02470	784	TIGR02470, sucr_synth, sucrose synthase	1e-07
PRK09922	359	PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo	1e-06
TIGR02918	500	TIGR02918, TIGR02918, accessory Sec system glycosy	5e-06
PRK14098	489	PRK14098, PRK14098, glycogen synthase; Provisional	1e-05
PRK15490	578	PRK15490, PRK15490, Vi polysaccharide biosynthesis	3e-05
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	5e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	1e-04
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	1e-04
TIGR03087	397	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH	4e-04
PRK14099	485	PRK14099, PRK14099, glycogen synthase; Provisional	5e-04
PLN00142	815	PLN00142, PLN00142, sucrose synthase	7e-04
cd03806	419	cd03806, GT1_ALG11_like, This family is most close	0.002
PLN02939	977	PLN02939, PLN02939, transferase, transferring glyc	0.002
PRK10307	412	PRK10307, PRK10307, putative glycosyl transferase;	0.002

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score =  576 bits (1487), Expect = 0.0
 Identities = 231/293 (78%), Positives = 261/293 (89%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           MSYHTHVPVYIPRYTFSWLVKPMW +I+FLHRAADLTLV S A+GK+LEAA VTAAN+IR
Sbjct: 173 MSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIR 232

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 120
           +W KGVDSESFHPRFRS EMR RLS GEP+KPLIV+VGRLG EK+LDFLKRVM+RLP AR
Sbjct: 233 VWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPGAR 292

Query: 121 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 180
           +AF+GDGPYREELEKMF G P VFTGML G+ELSQAYASGDVFVMPSESETLG VVLEAM
Sbjct: 293 LAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAM 352

Query: 181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           +SG+PVV  RAGGIPDIIP DQ+GK G+L+ PGD+DDC+ KLE LL + ELRE MG AAR
Sbjct: 353 ASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAR 412

Query: 241 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 293
           +E+EK+DWRAATR +RNEQY+AAIWFWRKKRAQLL P+QWL  ++FP+ EVN 
Sbjct: 413 EEVEKWDWRAATRKLRNEQYSAAIWFWRKKRAQLLGPVQWLPAQLFPAPEVNS 465

Length = 465

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  279 bits (715), Expect = 6e-93
 Identities = 110/256 (42%), Positives = 142/256 (55%), Gaps = 13/256 (5%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
            SYHT  P Y+  Y    L    W  +++ H  AD  LVPS ++  +L A       ++R
Sbjct: 112 TSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGF---RRVR 168

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE-- 118
           +W +GVD+E FHPR R   +R RL  G PD+P++++VGRL  EK+L+ L      L    
Sbjct: 169 LWPRGVDTELFHPRRRDEALRARL--GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226

Query: 119 -ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 177
             R+  +GDGP R  LE         F G L GEEL+ AYAS DVFV PS +ET GLVVL
Sbjct: 227 PVRLVIVGDGPARARLEA--RYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVL 284

Query: 178 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 237
           EAM+SG+PVV   AGG  DI+    DG+ G L  PGD +   + L  LL + ELR  M  
Sbjct: 285 EAMASGLPVVAPDAGGPADIV---TDGENGLLVEPGDAEAFAAALAALLADPELRRRMAA 341

Query: 238 AARQEMEKYDWRAATR 253
            AR E E+  W A   
Sbjct: 342 RARAEAERRSWEAFLD 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  175 bits (445), Expect = 2e-52
 Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 17/265 (6%)

Query: 3   YHTHVPVYIPRYTFSWLVKPMWL-VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 61
              H   +        L+  +   + +   R AD  +  S A  ++L         KI +
Sbjct: 113 LTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITV 172

Query: 62  WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLP 117
              GVD+E F P  R+     R      D+P+I+ VGRL   K +D L     ++    P
Sbjct: 173 IPNGVDTERFRPAPRA---ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYP 229

Query: 118 EARIAFIGDGPYREELEKMFT--GMPA--VFTGMLLGEELSQAYASGDVFVMPSESETLG 173
           + R+  +GDGP REELE +    G+     F G +  E+L   YA+ DVFV+PS  E  G
Sbjct: 230 DVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFG 289

Query: 174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE 233
           LV+LEAM++G+PVV    GGIP+++   +DG+ G L  PGD +     +  LL + ELR 
Sbjct: 290 LVLLEAMAAGLPVVASDVGGIPEVV---EDGETGLLVPPGDPEALAEAILRLLDDPELRR 346

Query: 234 TMGQAARQEMEK--YDWRAATRTIR 256
            +G+AAR+ + +     R A RT  
Sbjct: 347 RLGEAARERVAERFSWDRVAARTEE 371

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  173 bits (441), Expect = 1e-51
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 21/258 (8%)

Query: 2   SYHTHVPVYIPRYTFSWLVKP----MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN 57
           +YHT    Y        L+        L  +F +R  D  + PS  I   L    V    
Sbjct: 114 TYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRC-DAVIAPSEKIADLLREYGVKR-- 170

Query: 58  KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVM 113
            I +   G+D + F P     E R        D+P++++VGRL  EK++DFL     R++
Sbjct: 171 PIEVIPTGIDLDRFEPVDGDDERRKL--GIPEDEPVLLYVGRLAKEKNIDFLIRAFARLL 228

Query: 114 DRLPEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES 169
              P+ ++  +GDGP REELE++   +      +FTG +  EEL   Y + D+FV  S +
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTT 288

Query: 170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 229
           ET GLV+LEAM++G+PVV V A G+PD++    DG+ G+LF PGD +     L  LL + 
Sbjct: 289 ETQGLVLLEAMAAGLPVVAVDAPGLPDLV---ADGENGFLFPPGD-EALAEALLRLLQDP 344

Query: 230 ELRETMGQAARQEMEKYD 247
           ELR  + + A +  EK+ 
Sbjct: 345 ELRRRLSKNAEESAEKFS 362

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  142 bits (361), Expect = 5e-40
 Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 17/195 (8%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEAR 120
           GVD+E F P         R      DK +I+ VGRL   K +D+L     R++ + P+  
Sbjct: 179 GVDTERFSPA---DRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVH 235

Query: 121 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVV 176
           +  +GDGP RE LE +   +       F G +  EE+   YA+ DVFV+PS  E  GLV+
Sbjct: 236 LVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVL 295

Query: 177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 236
           LEAM+ G+PVV    GGIP+II    DG+ G L  PGD +     +  LL +  LR  +G
Sbjct: 296 LEAMACGLPVVATDVGGIPEII---TDGENGLLVPPGDPEALAEAILRLLADPWLR--LG 350

Query: 237 QAARQEM-EKYDWRA 250
           +AAR+ + E++ W  
Sbjct: 351 RAARRRVAERFSWEN 365

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  129 bits (325), Expect = 6e-35
 Identities = 98/270 (36%), Positives = 148/270 (54%), Gaps = 26/270 (9%)

Query: 2   SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA----ADLTLVPSVAIGKDLEAARVTAAN 57
           + H  +P  +       L+  + L++K L +A    AD  +  S A+ + LEA  V   N
Sbjct: 115 TLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGV--PN 172

Query: 58  KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVM 113
           KI +   G+D+E F P       R  L   E  K ++++VGRL  EK LD L     ++ 
Sbjct: 173 KIVVIPNGIDTEKFAP------ARIGLLP-EGGKFVVLYVGRLDPEKGLDLLIEAAAKLK 225

Query: 114 DRLPEARIAFIGDGPY-REELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSE 168
            R P+ ++  +GDGP  REELEK+   +       F G +  EEL++  AS DVFV+PS 
Sbjct: 226 KRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSL 285

Query: 169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 228
           SE  GLV+LEAM++G PV+    GGIP+++   +DG+ G L  PGD+++    LE LL +
Sbjct: 286 SEGFGLVLLEAMAAGTPVIASDVGGIPEVV---EDGETGLLVPPGDVEELADALEQLLED 342

Query: 229 QELRETMGQAARQEM-EKYDWRAATRTIRN 257
            ELRE +G+AAR+ + E++ W      +  
Sbjct: 343 PELREELGEAARERVEEEFSWERIAEQLLE 372

Length = 381

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score =  118 bits (298), Expect = 4e-33
 Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 90  DKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKM--FTGMPA- 142
           DKP+I+ VGRL  EK LD L      L    P  ++  +GDG   ++L+K+    G+   
Sbjct: 1   DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDN 60

Query: 143 -VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 201
            +F G +  E+L + Y   D+FV+PS  E  GLV+LEAM++G+PV+    GG  +I+   
Sbjct: 61  VIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIV--- 117

Query: 202 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
           +DG+ G L +PGD +     +E LL ++ELRE +G+ AR+
Sbjct: 118 KDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  123 bits (312), Expect = 9e-33
 Identities = 77/239 (32%), Positives = 105/239 (43%), Gaps = 19/239 (7%)

Query: 32  RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK 91
           RAAD  +  +    ++L +       +IR+   GVD E F P  R+   R RL   +PDK
Sbjct: 162 RAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLR-DPDK 220

Query: 92  PLIVHVGRLGVEKSLDFLKRVMDRLPEAR-----------IAFIGDGPY--REELEKMFT 138
           P I+ VGRL   K +D L R    LPE R              I         EL +   
Sbjct: 221 PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELG 280

Query: 139 GMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 197
            +  V F G +  E+L   Y + DVFV P+  E  GL  LEAM+ G+PVV    GG  DI
Sbjct: 281 VIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDI 340

Query: 198 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTI 255
           +    DG  G L +P D +   + L  LL +  LR  + +A  +     Y W      +
Sbjct: 341 V---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARL 396

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  120 bits (302), Expect = 1e-31
 Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 46/264 (17%)

Query: 4   HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK 63
           H  + + + R         + L+I+ L+R AD  +  S  + +DL        +KI +  
Sbjct: 112 HNSLSLELKRK------LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIY 165

Query: 64  KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEA 119
             +D E    R  + E         PD P+I+ VGRL  +K  D L      +    P+A
Sbjct: 166 NPIDIEEI--RALAEE--PLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA 221

Query: 120 RIAFIGDGPYREELEKM-----------FTGM---PAVFTGMLLGEELSQAYASGDVFVM 165
           R+  +GDGP REELE +           F G    P  +        L  A    D+FV+
Sbjct: 222 RLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPY--------LKAA----DLFVL 269

Query: 166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD---LDDCLSKL 222
            S  E    V+LEAM+ G PVV     G  +I+   +DG+ G L   GD   L      L
Sbjct: 270 SSRYEGFPNVLLEAMALGTPVVATDCPGPREIL---EDGENGLLVPVGDEAALAAAALAL 326

Query: 223 EPLLYNQELRETMGQAARQEMEKY 246
             LL + ELRE +  AAR+ + + 
Sbjct: 327 LDLLLDPELRERLAAAARERVARE 350

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score =  119 bits (300), Expect = 3e-31
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 31/216 (14%)

Query: 56  ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS-----LDFLK 110
             K+ +   GVD+  F P                  P I+ VGR  VEK      L+   
Sbjct: 164 PEKVHVHPIGVDTAKFTPA-----------TPARRPPRILFVGRF-VEKKGPLLLLEAFA 211

Query: 111 RVMDRLPEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMP 166
           R+  R+PE R+  IGDGP    LE +   +       F G     E+ +      +F+ P
Sbjct: 212 RLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271

Query: 167 S------ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 220
           S      ++E L +V+LEA +SG+PVV  R GGIP+ +   +DG+ G L   GD+    +
Sbjct: 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAV---EDGETGLLVPEGDVAALAA 328

Query: 221 KLEPLLYNQELRETMGQAARQE-MEKYDWRAATRTI 255
            L  LL + +LR  MG A R+   E++D R  T  +
Sbjct: 329 ALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKL 364

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  116 bits (294), Expect = 2e-30
 Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 55  AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----K 110
              KI +   GVD+E F P   +            D  LI  V RL  +K    L     
Sbjct: 157 PPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAA 216

Query: 111 RVMDRLPEARIAFIGDGPYREELEKMFT---GMPAVFTGMLLGE--ELSQAYASGDVFVM 165
            ++ + P AR+  +GDGP R  LE +     G+       LLGE  ++     + DVFV+
Sbjct: 217 LLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVI--LLGERSDVPALLNALDVFVL 274

Query: 166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL 225
            S SE    V+LEAM+ G+PVV    G   +++     G  G+L  PGD +     +E L
Sbjct: 275 SSLSEGFPNVLLEAMACGLPVVATDVGDNAELV-----GDTGFLVPPGDPEALAEAIEAL 329

Query: 226 LYNQELRETMGQAARQEMEKY 246
           L +  LR+ +G+AAR+ +E+ 
Sbjct: 330 LADPALRQALGEAARERIEEN 350

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  114 bits (288), Expect = 2e-29
 Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 15/225 (6%)

Query: 24  WLVIKFLHRAADLTLV-PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRW 82
           W   +      +LT+V PS  +     ++ +     I +   G+D+  F PR +  E R 
Sbjct: 125 WRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKR-EARK 183

Query: 83  RLSNGEPDKPLIVHVGRLGVE---KSLDFLKRVMDRLPEA---RIAFIGDGPYREELEKM 136
           RL     DK +I+  G +G     K  D L   + RL E     I  +  G    E+   
Sbjct: 184 RL-GLPADKKIIL-FGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPD 241

Query: 137 FTGMPAVFTGMLLGEE-LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP 195
               P  + G L  +E L+  Y++ DVFV+PS  E      +EA++ G PVV    GGIP
Sbjct: 242 L-PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIP 300

Query: 196 DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 240
           DI+     G  GYL  PGD +D    +E LL + + RE +G+AAR
Sbjct: 301 DIV---DHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAAR 342

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  114 bits (287), Expect = 3e-29
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 20/252 (7%)

Query: 17  SWLVKPM-WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF 75
           S L + +  L  + ++R AD  +V S  + + L    V    KI +   GVD E F P  
Sbjct: 149 SLLYRLLRKLE-RLIYRRADAIVVISPGMREYLVRRGV-PPEKISVIPNGVDLELFKPP- 205

Query: 76  RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREE 132
             ++   R   G  DK ++++ G +G  + LD L      L   P+ R   +GDGP +EE
Sbjct: 206 -PADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEE 264

Query: 133 LEKMFTGMPA---VFTGMLLGEELSQAYASGDVFVMP-SESETLGLVV----LEAMSSGI 184
           L+++   +      F G +  EEL +  A+ DV ++P         V      E M++G 
Sbjct: 265 LKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK 324

Query: 185 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ-EM 243
           PV+    G   +++   ++   G +  PGD +   + +  LL + E R  MG+  R+   
Sbjct: 325 PVLASVDGESAELV---EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVE 381

Query: 244 EKYDWRAATRTI 255
           EK+        +
Sbjct: 382 EKFSREKLAERL 393

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score =  111 bits (280), Expect = 2e-28
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 28/237 (11%)

Query: 20  VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE 79
             P  + +      AD  +  S    + L        +KI +   GVD E F PR     
Sbjct: 117 RSPDAIDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPR----- 171

Query: 80  MRWRLSNGEPDKPLIVHVGRLGVEK-----SLDFLKRVMDRLPEARIAFIGDGPYREELE 134
                     +   I+ VGRL VEK      L+ L  + DR  + R+  +GDGP R+ELE
Sbjct: 172 ----PPPPPGEPLRILSVGRL-VEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELE 226

Query: 135 KMFT--GMPAV--FTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGI 184
            +    G+       G    EE+ +   + D+FV+PS      + E L +V++EAM+ G+
Sbjct: 227 ALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGL 286

Query: 185 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
           PV+     GIP+++   +DG+ G L  PGD +     +E LL + ELR  MG+A R 
Sbjct: 287 PVISTDVSGIPELV---EDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRA 340

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  110 bits (276), Expect = 8e-28
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 45/216 (20%)

Query: 57  NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF--LKRVMD 114
            +I +    VD + F P+   +  R         + +++H+         +F  +KR+ D
Sbjct: 165 KEIEVIPNFVDEDRFRPKPDEALKRRLG--APEGEKVLIHIS--------NFRPVKRIDD 214

Query: 115 ----------RLPEARIAFIGDGPYREELEKMFTGMPAVFTGML-----LG--EELSQAY 157
                      +P AR+  +GDGP R   E++     A   G+      LG  + + +  
Sbjct: 215 VIRIFAKVRKEVP-ARLLLVGDGPERSPAERL-----ARELGLQDDVLFLGKQDHVEELL 268

Query: 158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDD 217
           +  D+F++PSE E+ GL  LEAM+ G+PVV   AGGIP+++   + G+ G+L + GD++ 
Sbjct: 269 SIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVV---KHGETGFLVDVGDVEA 325

Query: 218 CLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 253
                  LL + EL +   +AAR        RAA R
Sbjct: 326 MAEYALSLLEDDELWQEFSRAAR-------NRAAER 354

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  108 bits (272), Expect = 3e-27
 Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 15/225 (6%)

Query: 24  WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRSSEMRW 82
            L  +FL RA D  +  S    +     R    +K+R+   G+D   +  P      +  
Sbjct: 129 PLQRRFLRRA-DAIVATSPNYAETSPVLR-RFRDKVRVIPLGLDPARYPRPDALEEAIWR 186

Query: 83  RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT---G 139
           R       +P  + VGRL   K LD L      LP+A +  +G+GP   ELE +      
Sbjct: 187 R----AAGRPFFLFVGRLVYYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGL 242

Query: 140 MPAV-FTGMLLGEELSQAYASGDVFVMPS--ESETLGLVVLEAMSSGIPVVGVRAGGIPD 196
           +  V F G L  EE +   A+ DVFV PS   SE  G+V+LEAM+ G PV+    G    
Sbjct: 243 LDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS 302

Query: 197 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
            +  +  G  G +  PGD       +  LL + ELRE +G+AAR+
Sbjct: 303 YV--NLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARE 345

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score =  106 bits (266), Expect = 2e-26
 Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 20/242 (8%)

Query: 28  KFLHRAADLTLVPSVAIGKDLEA-----ARVTAANKIRIWKKGVDSESFHPRFRSSEMRW 82
           ++L R     +   VA+ +DLE       +V  A   +I+  GVD+E FHP         
Sbjct: 127 RWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYN-GVDTERFHPSRGDRSPIL 185

Query: 83  RLSNGEPDKPLIVHVGRLGVEKSLDFLKR----VMDRLPE----ARIAFIGDGPYREELE 134
                  +  ++  VGRL   K    L R    ++ +LPE     R+  +GDGP R   E
Sbjct: 186 PPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACE 245

Query: 135 KMFTGMPAVFTGMLLGE--ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 192
           +M           L GE  ++     + D+FV+PS +E +   +LEAM+SG+PV+    G
Sbjct: 246 QMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG 305

Query: 193 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAA 251
           G P+++   Q G  G L  PGD       L+P + +   R   G A R   E ++   A 
Sbjct: 306 GNPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAM 362

Query: 252 TR 253
             
Sbjct: 363 VA 364

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  105 bits (265), Expect = 3e-26
 Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 46/204 (22%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEAR 120
           GVD + F P                D P+ + V RL  +K +D L    + +  + P  R
Sbjct: 171 GVDLDRFSPS---------PEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVR 221

Query: 121 IAFIGDGPYREELEKM------------FTG----MPAVFTGMLLGEELSQAYASGDVFV 164
           +  +GDG        +            F G    +P +                 DVFV
Sbjct: 222 LLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAA-------------DVFV 268

Query: 165 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 224
           +PS  E L  V+LEAM+ G PV+     G  + +    DG  G+L  PGD +     +E 
Sbjct: 269 LPSYREGLPRVLLEAMAMGRPVIATDVPGCREAV---IDGVNGFLVPPGDAEALADAIER 325

Query: 225 LLYNQELRETMGQAARQEME-KYD 247
           L+ + ELR  MGQAAR+  E ++D
Sbjct: 326 LIEDPELRARMGQAARKRAEEEFD 349

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  105 bits (264), Expect = 3e-26
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 24/176 (13%)

Query: 89  PDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKM-------- 136
                I+ VGRL  +K  D L     ++  + P+ ++  +GDGP RE LE +        
Sbjct: 176 LKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLED 235

Query: 137 -FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGI 194
               +          + + + YA   +FV+ S  E   +V+LEAM+ G+PV+      G 
Sbjct: 236 RVILLGFT-------KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP 288

Query: 195 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA 250
            +II   +DG  G L   GD++     L  L+ ++ELR+ MG  AR+  E++    
Sbjct: 289 SEII---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSIEN 341

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score =  103 bits (260), Expect = 2e-25
 Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 28/190 (14%)

Query: 66  VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF--LKRVMD--------- 114
           VD++ +  +     ++ +L     D+ +++H+         +F  +KRV D         
Sbjct: 176 VDTDRYRRK-NDPALKRKLGAP-EDEKVLIHIS--------NFRPVKRVEDVIEVFARVQ 225

Query: 115 -RLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG--EELSQAYASGDVFVMPSESET 171
             +P A++  +GDGP R   E++   +      + LG  +++++  +  D+F++PSE E+
Sbjct: 226 QEVP-AKLLLVGDGPERSPAEQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSEKES 284

Query: 172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL 231
            GL  LEAM+ G+PV+   AGGIP+++   + G  G+L + GD++        LL ++EL
Sbjct: 285 FGLAALEAMACGVPVIASNAGGIPEVV---EHGVTGFLCDVGDVETMAEYAISLLEDEEL 341

Query: 232 RETMGQAARQ 241
            +    AAR+
Sbjct: 342 LQRFSAAARE 351

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  103 bits (258), Expect = 3e-25
 Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 56  ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM-- 113
              I +   GVD   F         R       PDK +I+ +GRL  +K LD L      
Sbjct: 170 KAPIAVIPNGVDIPPFAALPSRGRRRKF--PILPDKRIILFLGRLHPKKGLDLLIEAFAK 227

Query: 114 --DRLPEARIAFIG--DGPYREELEKMFT---GMPAV-FTGMLLGEELSQAYASGDVFVM 165
             +R P+  +   G  +G YR EL+++         V FTGML GE+ + A A  D+FV+
Sbjct: 228 LAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVL 287

Query: 166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL 225
           PS SE  G+VV EA++ G PVV        ++I        G++ +    D   + L   
Sbjct: 288 PSHSENFGIVVAEALACGTPVVTTDKVPWQELIEYG----CGWVVDDDV-DALAAALRRA 342

Query: 226 LYNQELRETMGQAARQ-EMEKYDWRA 250
           L   +  + MG+  R    E++ W A
Sbjct: 343 LELPQRLKAMGENGRALVEERFSWTA 368

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  102 bits (256), Expect = 5e-25
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 17/258 (6%)

Query: 7   VPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV 66
           +P+  P Y      +    +++   R AD  +  S A  +DL        +KI +   GV
Sbjct: 114 IPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGV 173

Query: 67  DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEA----RIA 122
           D     P   +  +R         +P  ++VG +   K+L+ L     RLP      ++ 
Sbjct: 174 DPRFRPPPAEAEVLRALYL---LPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLV 230

Query: 123 FIG-DGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 177
            +G  G   EEL      +       F G +  EEL+  Y     FV PS  E  GL VL
Sbjct: 231 IVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVL 290

Query: 178 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 237
           EAM+ G PV+      +P++      G     F+P D +   + +E LL +  LRE + +
Sbjct: 291 EAMACGTPVIASNISSLPEVA-----GDAALYFDPLDPEALAAAIERLLEDPALREELRE 345

Query: 238 AARQEMEKYDWRAATRTI 255
                 +++ W    R  
Sbjct: 346 RGLARAKRFSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  103 bits (258), Expect = 8e-25
 Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 36/210 (17%)

Query: 58  KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVM 113
           KIR+   G+D E F P         R +  E + P++  +GR+     ++  +     V 
Sbjct: 268 KIRVIPNGIDPERFAPA--------RRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR 319

Query: 114 DRLPEARIAFIG----DGPYREE---------LEKMFTGMPAVFTGMLLGEELSQAYASG 160
            ++P+A    IG    D  Y EE         LE         FTG    + + +     
Sbjct: 320 KKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVK-----FTGF---QNVKEYLPKL 371

Query: 161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGKIGYLFNPGDLDD 217
           DV V+ S SE   LV+LEAM++GIPVV    G   ++I    ++  G  G +  P D + 
Sbjct: 372 DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEA 431

Query: 218 CLSKLEPLLYNQELRETMGQAARQEMEKYD 247
               +  LL + ELR  MG+A R+ +E+Y 
Sbjct: 432 LARAILRLLKDPELRRAMGEAGRKRVERYY 461

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 94.2 bits (234), Expect = 5e-23
 Identities = 57/152 (37%), Positives = 74/152 (48%), Gaps = 14/152 (9%)

Query: 70  SFHPRFRSSEMRWRLSNGEPD--KPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAF 123
           + H   RS      LS           V VGRL  EK LD L      + +R P+ ++  
Sbjct: 81  TVHGVNRSLLEGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVI 140

Query: 124 IGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASG-DVFVMPSESETLGLVVLE 178
            GDGP RE LE++          +F G L  EEL     +  DVFV+PS  E  GLVVLE
Sbjct: 141 AGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLE 200

Query: 179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF 210
           AM+ G+PV+    GG P+I+   +DG  G L 
Sbjct: 201 AMACGLPVIATDVGGPPEIV---EDGLTGLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 94.5 bits (235), Expect = 5e-22
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 25/244 (10%)

Query: 33  AADLTLVPSVAIGKD-LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK 91
           AAD  +  S  + +D L+        K+ +   G+D++ + P    + +  R    +  +
Sbjct: 144 AADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRY-GIDRSR 201

Query: 92  PLIVHVGRLGVEKSLDFLKRVMDRLP-EARIAFIGDGP----YREELEKMFTGMPAVFTG 146
           P I+ VGR+  +K +  L   +  +P + ++      P      EE+ +    +    TG
Sbjct: 202 PYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTG 261

Query: 147 ------MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 200
                 ML  EEL +  ++ +VFV PS  E LG+V LEAM+ G PVV    GGIP+++  
Sbjct: 262 IIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVV-- 319

Query: 201 DQDGKIGYLFNPGDLDDC-----LSK-LEPLLYNQELRETMGQAARQE-MEKYDWRA-AT 252
             DG+ G+L  P + D       L+K +  LL + EL + MG A R+   E++ W + A 
Sbjct: 320 -VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAK 378

Query: 253 RTIR 256
           +T+ 
Sbjct: 379 KTVE 382

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 8/166 (4%)

Query: 81  RWRLSNGEPDKPLIV-HVGRLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREELEKMF 137
             R     P   L    +G+L   K +D L     RLP   I  +  G+G   EE     
Sbjct: 180 AKRPRRAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL 239

Query: 138 TGMPAV-FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIP 195
            G P V F G    EE+   YA  DV V+PS   E   LV+ EA+++G+PV+    GG+ 
Sbjct: 240 EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMA 299

Query: 196 DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
           +++   +DG  G LF PGD +D  + LE L+ + +L E +      
Sbjct: 300 ELV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEP 342

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 86.5 bits (215), Expect = 4e-19
 Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 22/182 (12%)

Query: 88  EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI----GDGPYRE---ELEKMFTGM 140
           +PD PL   VGRL  +K +D L   +  L E     +    GD  Y E   EL   + G 
Sbjct: 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGR 352

Query: 141 PAVFTGMLLGEELS-QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPD-I 197
            AV  G    E L+   YA  D F+MPS  E  GL  + AM  G   + VRA GG+ D +
Sbjct: 353 VAVLIGY--DEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPI-VRATGGLADTV 409

Query: 198 IPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAA 251
           I  ++D     G++F   N   L   L +   L  + E    + + A   M + + W  +
Sbjct: 410 IDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA---MAQDFSWDRS 466

Query: 252 TR 253
            +
Sbjct: 467 AK 468

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 82.8 bits (205), Expect = 6e-18
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 21/178 (11%)

Query: 85  SNGEPDKPL-------IVHVGRLGVEKSLDFLKRVMDRLPEARIAF--IGDGPYREELEK 135
           S    D  L       +V V R  V+  +  L  +    P  +I +  IG GP  + L++
Sbjct: 223 SKPSKDDTLRIVSCSYLVPVKR--VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKE 280

Query: 136 MFTGMP----AVFTGMLLGEELSQAYA--SGDVFVMPSESETLGLVVLEAMSSGIPVVGV 189
           +    P      FTG L   E+ + Y     DVFV  SESE L + ++EAMS GIPV+  
Sbjct: 281 LAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT 340

Query: 190 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCL-SKLEPLLYNQELRETMGQAARQEMEKY 246
             GG P+I+    +G  G L +     + L S L   + N+E  +TM + AR++ E+ 
Sbjct: 341 NVGGTPEIV---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEEN 395

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 50  AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSL 106
           A++   ANK  +   G+D++ F         R ++ N    + D  +I+ VGRL   K  
Sbjct: 147 ASKAFNANKSFVVYNGIDTDRFRK---DPARRLKIRNALGVKNDTFVILAVGRLVEAKDY 203

Query: 107 DFLKRVMDRLPEA----RIAFIGDGPYREELEKMFTGMPAVFTGMLLG--EELSQAYASG 160
             L +   +L       ++   GDGP R  LE++   +       LLG  ++++  Y + 
Sbjct: 204 PNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAA 263

Query: 161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 220
           D+FV+ S  E  GLVV EAM+  +PVV   AGG+ +++     G  G +    D +   +
Sbjct: 264 DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVV-----GDSGLIVPISDPEALAN 318

Query: 221 KL-EPLLYNQELRETMGQAARQEMEKYDWRA 250
           K+ E L  + E R+ +G    + ++K+   +
Sbjct: 319 KIDEILKMSGEERDIIGARRERIVKKFSINS 349

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 82.0 bits (203), Expect = 1e-17
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 76  RSSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYR 130
                + R   G   D+ +I+ VGRL   K +D+L    K V+ + P  R+  +GDG Y 
Sbjct: 211 EVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDYS 270

Query: 131 EEL---EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV 187
             L   +K++      FTG L  E+L + Y   DV V+PS  E    V +E M  G+P++
Sbjct: 271 RYLQECKKIW--SKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHGLPLI 328

Query: 188 GVRAGGIPDIIPEDQDG---KIGYLFNPGDLDDCL--SKLEPLLYNQELRETMGQAARQE 242
           G  + G+ ++I +  +G    I    +  +LD      KL  LL + +  + MG+ AR+ 
Sbjct: 329 GTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNARRR 388

Query: 243 MEKY 246
             + 
Sbjct: 389 YLEK 392

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 61/224 (27%), Positives = 87/224 (38%), Gaps = 48/224 (21%)

Query: 54  TAANKIRIWKKGVDSESFHPRFRSSE---MRWRLSNGEPDKPLIVHVGRL----GVEKSL 106
              ++IR+  +GVD + F P     E      R       KP+I+  GRL    G E  +
Sbjct: 145 VDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFI 204

Query: 107 DFLKRVMDRLPEARIAFIGDGP----YREELEKM-----------FTG----MPAVFTGM 147
           + L R+    P+  +  +GD      Y  EL ++           F G    MPA     
Sbjct: 205 EALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPA----- 259

Query: 148 LLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 206
                   AYA  D+ V  S E E  G   +EA + G PV+    GG  + +   + G+ 
Sbjct: 260 --------AYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETV---RPGET 308

Query: 207 GYLFNPGD---LDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 247
           G L  PGD   L   L ++  LL     R  M   AR  +E   
Sbjct: 309 GLLVPPGDAEALAQALDQILSLLPEG--RAKMFAKARMCVETLF 350

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 94  IVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFT--GMPAVFTGM 147
           I+ V RL  EK LD L     +V+ ++P+A +   G G   E+L+++    G+       
Sbjct: 207 IITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLK 266

Query: 148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGK 205
               +L + Y    + ++ S+SE  GL ++EA+S G+PV+   V  G   +II   +DG+
Sbjct: 267 GYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGP-SEII---EDGE 322

Query: 206 IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY 246
            GYL   GD++     +  LL + +L +   +AA +  E+Y
Sbjct: 323 NGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 81.3 bits (201), Expect = 2e-17
 Identities = 70/225 (31%), Positives = 100/225 (44%), Gaps = 23/225 (10%)

Query: 57  NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR----V 112
           ++I +   G D E F P  R++E R RL     D  ++  VGR+   K+ D L R    +
Sbjct: 187 DRIDVVAPGADLERFRPGDRATE-RARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAEL 244

Query: 113 MDRLPEA--RIAFIGDGP----------YREELEKMFTGMPAVFTGMLLGEELSQAYASG 160
           +DR P+   R+  +G GP            E   ++       F      EEL   Y + 
Sbjct: 245 LDRDPDRNLRVIVVG-GPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA 303

Query: 161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 220
           DV  +PS +E+ GLV +EA + G PVV  R GG+P  +    DG+ G L +  D  D   
Sbjct: 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAV---ADGETGLLVDGHDPADWAD 360

Query: 221 KLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW 265
            L  LL +   R  MG AA +    + W AAT       Y  A+ 
Sbjct: 361 ALARLLDDPRTRIRMGAAAVEHAAGFSW-AATADGLLSSYRDALA 404

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 76.5 bits (189), Expect = 8e-16
 Identities = 65/219 (29%), Positives = 95/219 (43%), Gaps = 20/219 (9%)

Query: 50  AARVTAANKIRIWKKGVDSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF 108
            AR   A KI +    VD + F  P  R   +   L  G    P+I  +G     + LD 
Sbjct: 173 VARGIPAEKITVIPNAVDLDLFGLPAPRDPALAAEL--GLEGAPVIGFIGSFYAYEGLDL 230

Query: 109 LKRVMDRL----PEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASG 160
           L   + RL    P+AR+  +G GP  E L      +      VFTG +  +E+ + Y+  
Sbjct: 231 LVAALPRLLRRHPDARLLLVGGGPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLI 290

Query: 161 DVFVMPSESETLGLVV-----LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDL 215
           DV   P     L  +V     LEAM+ G  V     GG  ++I   +DG+ G LF  GD 
Sbjct: 291 DVLAYPRLPMRLTELVTPLKPLEAMAQGRLVAASDVGGHRELI---RDGETGVLFPAGDP 347

Query: 216 DDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATR 253
               + L  LL N+     +  AAR+ +E + +W A+  
Sbjct: 348 AALAAALLALLDNRAQWPELRAAARRFVETERNWAASVA 386

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 45/152 (29%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 81  RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFT 138
           R  L    P  PL   V RL  +K LD L   +D L E   ++  +G G    ELE+   
Sbjct: 285 RLGLDVDLP-GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTG--DPELEEALR 341

Query: 139 GMPA-----VFTGMLLGEELSQA-YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 192
            + +     V   +   E L+   YA  DV +MPS  E  GL  L AM  G   +    G
Sbjct: 342 ALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETG 401

Query: 193 GIPDII-----PEDQDGKIGYLFNPGDLDDCL 219
           G+ D +        Q    G+LF   + D   
Sbjct: 402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLA 433

Length = 487

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 69/245 (28%), Positives = 96/245 (39%), Gaps = 39/245 (15%)

Query: 32  RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM----RWRLSNG 87
             AD  L  S A   +L A     A  +     GVD+  F P   +++     R  L  G
Sbjct: 137 VEADAVLCVSAAWAAELRAEWGIDATVV---PNGVDAARFSPAADAADAALRRRLGLRGG 193

Query: 88  EPDKPLIVHVGRLGVEK---SLDFLK---RVMDRLPEARIAFIGD------GPYREELEK 135
               P ++ VG  G+E    ++D L+    +  R P+A++   G         YR E E 
Sbjct: 194 ----PYVLAVG--GIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEA 247

Query: 136 MFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR 190
               +       V TG +   +L   Y   D F  PS  E  GLVVLEA++SGIPVV   
Sbjct: 248 RAAELGLDPGAVVITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALASGIPVV--- 304

Query: 191 AGGIPDIIP--EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW 248
                DI P  E          +P D D     L   L +   R  +  A  +   +Y W
Sbjct: 305 ---ASDIAPFTEYLGRFDAAWADPSDPDSIADALALAL-DPARRPALLAAGPELAARYTW 360

Query: 249 RAATR 253
            A+ R
Sbjct: 361 DASAR 365

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 30/194 (15%)

Query: 88  EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGM----P 141
           + D PL   + RL  +K +D L   +  L E   ++  +G G    ELE+    +    P
Sbjct: 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD--PELEEALRELAERYP 345

Query: 142 AVFTGML-LGEELSQ-AYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 198
                ++   E L+   YA  D  +MPS  E  GL  L AM  G +P+V  R GG+ D +
Sbjct: 346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVR-RTGGLADTV 404

Query: 199 ----PEDQDGKIGYLFNPGDLDDCLSKLEP--LLYNQ--ELRETMGQAARQEMEK-YDWR 249
               PE + G  G+LF   D    L+ L     LY Q   L E + + A   M + + W 
Sbjct: 405 VDGDPEAESGT-GFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA---MSQDFSWD 460

Query: 250 AATRTIRNEQYNAA 263
            +      +QY   
Sbjct: 461 KSA-----KQYVEL 469

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 29/159 (18%)

Query: 57  NKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD 114
            K ++   G+D E F   F     + R  L   E DK +I HVGR   +K+ +FL  +  
Sbjct: 159 KKFKVIPNGIDLEKF--IFNEEIRKKRRELGILE-DKFVIGHVGRFSEQKNHEFLIEIFA 215

Query: 115 RL----PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGE-----ELSQAYASGDV 162
            L    P A++  +GDG   EE++K    +     V     LG      EL QA    DV
Sbjct: 216 ELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVI---FLGVRNDVPELLQAM---DV 269

Query: 163 FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 201
           F+ PS  E L LV++EA +SG+P +      + D I ++
Sbjct: 270 FLFPSLYEGLPLVLIEAQASGLPCI------LSDTITKE 302

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 24/170 (14%)

Query: 89  PDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP----YREELEKM 136
           P++P I  V R          +D  ++V +R+P+ ++  +G    D P      EE+ + 
Sbjct: 188 PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEY 247

Query: 137 FTGMPAVFTGMLLGE---ELS--QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 191
             G P +    L      E++  Q  +   V +  S  E  GL V EA+  G PV+    
Sbjct: 248 AEGDPDIHVLTLPPVSDLEVNALQRAS--TVVLQKSIREGFGLTVTEALWKGKPVIAGPV 305

Query: 192 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 241
           GGIP  I   +DG+ G+L +    ++   ++  LL + ELR  MG  AR+
Sbjct: 306 GGIPLQI---EDGETGFLVDTV--EEAAVRILYLLRDPELRRKMGANARE 350

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 38/215 (17%)

Query: 50  AARVT--AAN----KIRIWKK-GVDSESFHP-----RFRSSEMR---WRLSNGEPDKPLI 94
           AARV    AN      RI K  G D+   +P     RF  +E +   + LS         
Sbjct: 151 AARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAEEKEDYY-LS--------- 200

Query: 95  VHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELS 154
             VGRL   K +D      ++L + R+  IGDGP  + L     G    F G +  EEL 
Sbjct: 201 --VGRLVPYKRIDLAIEAFNKLGK-RLVVIGDGPELDRLRAK-AGPNVTFLGRVSDEELR 256

Query: 155 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 214
             YA    F+ P+E E  G+V +EAM+SG PV+    GG  + +    DG  G LF    
Sbjct: 257 DLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETV---IDGVTGILFEE-Q 311

Query: 215 LDDCLSK-LEPLLYNQELRETMGQAARQEMEKYDW 248
             + L+  +E     ++  +   QA R   E++  
Sbjct: 312 TVESLAAAVERF---EKNEDFDPQAIRAHAERFSE 343

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 64.4 bits (157), Expect = 9e-12
 Identities = 65/240 (27%), Positives = 100/240 (41%), Gaps = 48/240 (20%)

Query: 30  LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 85
           L R  DL L  S     DL A R+        KI + + GVD   F PR   +       
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKA------- 218

Query: 86  NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPY---------RE 131
              P  PL I+ V RL  +K L        +L E  +AF    +G GP+         + 
Sbjct: 219 ---PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 132 ELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIP 185
           +LE +   MP    G     E+       DVF++PS      + E + + ++EAM+ GIP
Sbjct: 276 QLEDVVE-MP----GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIP 330

Query: 186 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-YNQELRETMGQAARQEME 244
           VV     GIP+++   +  K G+L    D      +L      + +    + + AR+++E
Sbjct: 331 VVSTLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVE 387

Length = 406

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 62.5 bits (152), Expect = 4e-11
 Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 38  LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV 97
           +VPS  + K     R+  A+ I I   G   E++    + + +R +L N  PD+ ++++ 
Sbjct: 144 IVPSQFL-KKFYEERLPNAD-ISIVPNGFCLETYQSNPQPN-LRQQL-NISPDETVLLYA 199

Query: 98  GRLGVEKSLDFLKRVMDRLPEAR----IAFIGD---------GPYREELEKMFT--GMPA 142
           GR+  +K +  L +  ++L  A     +  +GD           Y++++ +     G   
Sbjct: 200 GRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259

Query: 143 VFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 201
           +  G    E++   Y   D+ V+PS+  E   +V +EAM++G PV+    GGI + +   
Sbjct: 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFV--- 316

Query: 202 QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY 260
            +G  GY L  P   D  +S +   L + EL +   QA      KY W   T+    + +
Sbjct: 317 LEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIH 376

Query: 261 NAAIWF 266
           N   WF
Sbjct: 377 N---WF 379

Length = 380

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%)

Query: 97  VGRLGVEKSLDFLKRVMDRLPEAR-IAFIGD----GPYREELEKMFTGMPAV-FTGMLLG 150
           VGR+  E ++D L     +    + +  +G+     PY + L++     P + F G +  
Sbjct: 199 VGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYD 258

Query: 151 EELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ-DGKIGY 208
           +EL +      +F +   S       +LEAM+ G PV+        D     +  G    
Sbjct: 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLAS------DNPFNREVLGDKAI 312

Query: 209 LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDW 248
            F  G  DD  S LE L  + E    M +AAR+ + EKY W
Sbjct: 313 YFKVG--DDLASLLEELEADPEEVSAMAKAARERIREKYTW 351

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional

 Score = 61.3 bits (150), Expect = 1e-10
 Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 26/182 (14%)

Query: 88  EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFT 145
           + D PL   V RL  +K LD +   +  L E   ++  +G G    ELE+ F  + A + 
Sbjct: 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDP--ELEEAFRALAARYP 336

Query: 146 G---MLLG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD- 196
           G   + +G  E L+ + YA  D+F+MPS  E  GL  L A+  G +P+  VR  GG+ D 
Sbjct: 337 GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPI--VRRTGGLADT 394

Query: 197 IIPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQ--ELRETMGQAARQEMEKYDWR 249
           +I  + +     G++F   N  DL   L +    LY Q    R    QA  Q+   + W 
Sbjct: 395 VIDYNPEDGEATGFVFDDFNAEDLLRALRRAL-ELYRQPPLWRALQRQAMAQD---FSWD 450

Query: 250 AA 251
            +
Sbjct: 451 KS 452

Length = 466

>gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 41/220 (18%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNG------EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 118
           GVD   F+P   S E    + N       +P+KP I+ + R    K++  L     R P+
Sbjct: 217 GVDLSRFYPPQSSEETS-EIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPK 275

Query: 119 AR-----IAFIGDGPYREELEKMFTGMPAVFTGMLL------------------GEELSQ 155
            +     +  +G    R+++ KM +    V   +LL                   +++ +
Sbjct: 276 LQEMANLVLVLGC---RDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPE 332

Query: 156 AY----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN 211
            Y     S  +FV P+ +E  GL +LEA + G+P+V    GG  DII   ++   G L +
Sbjct: 333 LYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRN---GLLVD 389

Query: 212 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 250
             DL+   S LE  L +    +   +   + + + Y W A
Sbjct: 390 VLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDA 429

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439

>gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 38/219 (17%)

Query: 57  NKIRIWKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSLDF----- 108
           ++I +   G+D++   P     + R RL NG    P   +I  V R  +E    F     
Sbjct: 177 SRISVIHDGIDTDRLRP---DPQARLRLPNGRVLTPGDEVITFVAR-NLEPYRGFHVFMR 232

Query: 109 -LKRVMDRLPEARIAFIGD------------GPYREELEKMFTGMPAV----FTGMLLGE 151
            L R++   P+AR+  +G               +++ +     G   +    F G +  +
Sbjct: 233 ALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYD 292

Query: 152 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL-- 209
           +        DV V  +    L   +LEAM+ G  VVG     + ++I    DG+ G L  
Sbjct: 293 QYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVI---TDGENGLLVD 349

Query: 210 -FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 247
            F+P  L   + +   LL +   R  + +AAR+   +YD
Sbjct: 350 FFDPDALAAAVIE---LLDDPARRARLRRAARRTALRYD 385

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.1 bits (144), Expect = 5e-10
 Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 46/210 (21%)

Query: 66  VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARI 121
           VDS  F P           S  + DK  IV + RL   K +D L  ++  +    P  R 
Sbjct: 177 VDSSDFTPD---------PSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRF 227

Query: 122 AFIGDGPYREELEKM---FTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 177
              GDGP R  LE+M   +     V   G +  E +      G +F+  S +E   + ++
Sbjct: 228 IIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIV 287

Query: 178 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE------------PL 225
           EA S G+ VV  R GGIP+++P D    +  L  P D++  + KLE            P 
Sbjct: 288 EAASCGLLVVSTRVGGIPEVLPPD----MILLAEP-DVESIVRKLEEAISILRTGKHDPW 342

Query: 226 LYNQELRETMGQAARQEMEKYDW-RAATRT 254
            ++  ++  M          Y W   A RT
Sbjct: 343 SFHNRVK-KM----------YSWEDVAKRT 361

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 12/109 (11%)

Query: 90  DKPLIVHVGRLGVEKSLDFL-----KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVF 144
               I   G       L +L       +   LP+  +  IG GP  EEL ++   +   F
Sbjct: 1   GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGP--EELARLAPNV--HF 56

Query: 145 TGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRAG 192
            G +  E+L+   AS DV + P        L +LEA+++G+PVV    G
Sbjct: 57  LGFV--EDLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIG 103

Length = 134

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 221
           + + PS  ++  + V EA + G P++  R  G+ ++    ++  + Y     D ++   K
Sbjct: 1   IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEI-VLY----RDPEELAEK 55

Query: 222 LEPLLYNQELRETMGQAARQEMEK---YDWRAAT 252
           L  LL + E R  +  A R+ +     Y+ RA  
Sbjct: 56  LRYLLADPEERRAIAAAGRERVLAEHTYEHRAEQ 89

Length = 92

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 57.2 bits (138), Expect = 3e-09
 Identities = 67/240 (27%), Positives = 97/240 (40%), Gaps = 48/240 (20%)

Query: 30  LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 85
           L R  DL L  S     DL A R+ A      KI + + GVD   F  R           
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLKAMGCPPEKIAVSRMGVDMTRFTHR----------P 215

Query: 86  NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPYREELEKM---- 136
              P  PL I+ V RL  +K L        +L    +AF    +G GP+   L  +    
Sbjct: 216 VKAPGTPLEIISVARLTEKKGLHVAIEACRQLKAQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 137 ----FTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIPV 186
                  MP    G     E+       DVF++PS      + E + + ++EAM+ GIPV
Sbjct: 276 QLEDVVEMP----GFKPSHEVKAMLDDADVFLLPSVTGTDGDMEGIPVALMEAMAVGIPV 331

Query: 187 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL--LYNQELRETMGQAARQEME 244
           V     GIP+++   + GK G+L    D      +L     +  Q LR  +   AR+++E
Sbjct: 332 VSTVHSGIPELV---EAGKSGWLVPENDAHALADRLAAFSRIDTQTLRPVL-TRAREKVE 387

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 144 FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ 202
           + G + G E ++   +    + P    E  GLV++EAM+ G PV+  R G +P+++    
Sbjct: 228 YLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVE--- 284

Query: 203 DGKIGYLFNP 212
           DG  G+L + 
Sbjct: 285 DGVTGFLVDS 294

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 221
           +FV P+  E  GL VLEAM+ G+P    R GG  +II   QDG  G+  +P   ++   K
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII---QDGVSGFHIDPYHGEEAAEK 702

Query: 222 L----EPLLYNQELRETMGQAARQEM-EKYDWR 249
           +    E    +    + + Q   Q + EKY W+
Sbjct: 703 IVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWK 735

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784

>gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYL 209
           E + Q   +    ++ S+ E   + +LEAMS GIP +      G  DII   + G  G L
Sbjct: 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDII---KPGLNGEL 305

Query: 210 FNPGDLDDCLSKL 222
           + PG++D+ + KL
Sbjct: 306 YTPGNIDEFVGKL 318

Length = 359

>gnl|CDD|131964 TIGR02918, TIGR02918, accessory Sec system glycosylation protein GtfA

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 94  IVHVGRLGVEKSLDFL-KRVM---DRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLL 149
           I+   RL  EK +D+L K V+     +PE      G+G  +++L+K+     A     L 
Sbjct: 322 IITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLK 381

Query: 150 GE-ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGKI 206
           G   LS+ Y   ++++  S SE  GL ++EA+ SG+ ++G  V  G  P  I   +D K 
Sbjct: 382 GHRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGN-PTFI---EDNKN 437

Query: 207 GYL----FNPGDLDDCLSKL 222
           GYL        D D  ++ L
Sbjct: 438 GYLIPIDEEEDDEDQIITAL 457

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system [Protein fate, Protein modification and repair]. Length = 500

>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 107 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML-LGEELS-----QAYASG 160
           + L   +++L E  I  +  G   +E EK F          + +  E +      A A  
Sbjct: 323 ELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGL 382

Query: 161 DVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPE-DQDGKIGYLFNPGDLDDC 218
           D+ +MP + E+ G++ + AMS G IPV     GGI + I E  +D   G++F+    +  
Sbjct: 383 DMLLMPGKIESCGMLQMFAMSYGTIPVAYA-GGGIVETIEEVSEDKGSGFIFHDYTPEAL 441

Query: 219 LSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYN 261
           ++KL   L      E   +   + ME+ + W+ +      E+Y 
Sbjct: 442 VAKLGEALALYHDEERWEELVLEAMERDFSWKNSA-----EEYA 480

Length = 489

>gnl|CDD|185387 PRK15490, PRK15490, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 106 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF 163
           +DF  R +   P  R   +GDG  R E +K    +  +   + +G      Y     +VF
Sbjct: 417 IDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVF 476

Query: 164 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 206
           ++ S  E L  V++EA   G+PV+   AGG  +   E   G I
Sbjct: 477 ILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFI 519

Length = 578

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 168 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY 227
            +E  G+V LEAM +G PV+   +GG  + +    DG+ G+L  P   ++    +  L  
Sbjct: 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLAN 363

Query: 228 NQELRETMGQAARQ 241
           + +L + MG A R+
Sbjct: 364 DPDLADRMGAAGRK 377

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 110 KRVMDRLPEARIAFIGDGPYREEL----EKMFTGMPAVFTGMLLGEELSQAYASGDVFVM 165
           +R     P+ R   +G GP  E +    +++  G   +FTG  L   +       + F++
Sbjct: 540 QRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTG--LSRRVGYWLTQFNAFLL 597

Query: 166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG 204
            S  E L  V++EA  SG+PVV   AGG  + + E   G
Sbjct: 598 LSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTG 636

Length = 694

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 53/253 (20%), Positives = 91/253 (35%), Gaps = 34/253 (13%)

Query: 24  WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSEM 80
             +++ L R AD  +V S  + + L           +I          H           
Sbjct: 125 RALLRLLLRRADAVIVMSSELLRALLLRAYPE----KIAV------IPHGVPDPPAEPPE 174

Query: 81  RWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARI----AFIGDGPYREE 132
             +   G   +P+++  G L    G+E  L+ L  ++ + P+ R+        D      
Sbjct: 175 SLKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRG 234

Query: 133 LEKMFTGMPAV-----F-TGMLLGEELSQAYASGDVFVMP--SESETLGLVVLEAMSSGI 184
                     +     F    L  EEL + +++ DV V+P  S  +T   V+  A+  G 
Sbjct: 235 EAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK 294

Query: 185 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 244
           PV+    G   + + +   G    L  PGD       +  LL + EL + +   AR+   
Sbjct: 295 PVISTPVGH-AEEVLDGGTG---LLVPPGDPAALAEAIRRLLADPELAQALRARAREYAR 350

Query: 245 KYDW-RAATRTIR 256
              W R A R +R
Sbjct: 351 AMSWERVAERYLR 363

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|234105 TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 59/220 (26%), Positives = 84/220 (38%), Gaps = 48/220 (21%)

Query: 50  AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKS 105
           A R+TA         GVD++ F P       R   +   P K ++V  G +     ++  
Sbjct: 195 AGRITAFPN------GVDADFFSPD------RDYPNPYPPGKRVLVFTGAMDYWPNIDAV 242

Query: 106 LDFLKRVM----DRLPEARIAFIGDGPYREELEKMFTGMPAVF-TGMLLGEELSQAYASG 160
           + F +RV      R P A    +G  P      +    +P V  TG +   ++    A  
Sbjct: 243 VWFAERVFPAVRARRPAAEFYIVGAKPSPAV--RALAALPGVTVTGSV--ADVRPYLAHA 298

Query: 161 DVFVMPSESETLGLV------VLEAMSSGIPVV--GVRAGGIPDIIPEDQDGKIG-YLFN 211
            V V P     L +       VLEAM+   PVV     A GI        D   G  L  
Sbjct: 299 AVAVAP-----LRIARGIQNKVLEAMAMAKPVVASPEAAEGI--------DALPGAELLV 345

Query: 212 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 250
             D  D  + +  LL N   RE +GQAAR+ + + Y W  
Sbjct: 346 AADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPR 385

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 397

>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 12/120 (10%)

Query: 88  EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVF- 144
           +PD  L+  + RL  +K LD L   +  L    A++A +G G    ELE  F      + 
Sbjct: 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSG--DAELEARFRAAAQAYP 349

Query: 145 --TGMLLGEELSQAY---ASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 198
              G+++G + + A+   A  D  ++PS  E  GL  L A+  G +PVV  R GG+ D +
Sbjct: 350 GQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA-RVGGLADTV 408

Length = 485

>gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 18/98 (18%)

Query: 162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 221
            FV P+  E  GL V+EAM+ G+P      GG  +II    DG  G+  +P   D+  +K
Sbjct: 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII---VDGVSGFHIDPYHGDEAANK 725

Query: 222 L---------EPLLYNQELRETMGQAARQEM-EKYDWR 249
           +         +P  +N+     +  A  Q + E Y W+
Sbjct: 726 IADFFEKCKEDPSYWNK-----ISDAGLQRIYECYTWK 758

Length = 815

>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 26/147 (17%)

Query: 103 EKSLDFLKR-VMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGD 161
           EK ++ LK    +   E ++ F+ + P+ E                 L EELS A     
Sbjct: 288 EKRVEDLKLLAKELGLEDKVEFVVNAPFEE-----------------LLEELSTASIG-- 328

Query: 162 VFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCL 219
           +  M   +E  G+ V+E M++G IP+     G + DI+     G  G+L     +  + +
Sbjct: 329 LHTM--WNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAI 386

Query: 220 SKLEPLLYNQELRETMGQAARQEMEKY 246
            K+  L  ++E R  + +AAR  ++++
Sbjct: 387 EKI--LSLSEEERLRIRRAARSSVKRF 411

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419

>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 84  LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMP 141
           LS+ +  +PL+  + RL  +K +  ++  + +  E   +   +G  P    +++ F G+ 
Sbjct: 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPV-PHIQREFEGIA 830

Query: 142 AVFTG-----MLL--GEELSQA-YASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG 192
             F       ++L   E LS + YA+ D+F++PS  E  GL  + AM  G +P+V  + G
Sbjct: 831 DQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVR-KTG 889

Query: 193 GIPDIIPEDQDGKI------GYLFNPGDLDDCLSKLE 223
           G+ D + +  D  I      G+ F   D     S LE
Sbjct: 890 GLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALE 926

Length = 977

>gnl|CDD|236670 PRK10307, PRK10307, putative glycosyl transferase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 22/191 (11%)

Query: 66  VDSESFHPRFRSSEMRWRLSNGEPDKPLIV-HVGRL----GVEKSLDFLKRVMDRLPEAR 120
            +   F P   +     R   G PD   IV + G +    G+E  +D  +R+ DR P+  
Sbjct: 203 SEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRDR-PDLI 261

Query: 121 IAFIGDGPYREELEKM--FTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 177
               G G  +  LEKM    G+P V F  +   + L       D  ++P ++    LV  
Sbjct: 262 FVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLV-- 319

Query: 178 EAMSSGIPVVGVRAGGIPDII---PEDQDGK----IGYLFNPGDLDDCLSKLEPLLYNQE 230
             + S +    + A G   +    P  + G+    IG    P  ++  ++ +  L     
Sbjct: 320 --LPSKL--TNMLASGRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQAL 375

Query: 231 LRETMGQAARQ 241
           LR  +G  AR+
Sbjct: 376 LRPKLGTVARE 386

Length = 412

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
PLN02316	1036	synthase/transferase	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.98
cd04951	360	GT1_WbdM_like This family is most closely related	99.98
cd03794	394	GT1_wbuB_like This family is most closely related	99.98
TIGR02470	784	sucr_synth sucrose synthase. This model represents	99.98
PLN02501	794	digalactosyldiacylglycerol synthase	99.97
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.97
cd03819	355	GT1_WavL_like This family is most closely related	99.97
cd03822	366	GT1_ecORF704_like This family is most closely rela	99.97
cd03808	359	GT1_cap1E_like This family is most closely related	99.97
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	99.97
cd03812	358	GT1_CapH_like This family is most closely related	99.97
cd03825	365	GT1_wcfI_like This family is most closely related	99.97
cd03821	375	GT1_Bme6_like This family is most closely related	99.97
cd03820	348	GT1_amsD_like This family is most closely related	99.97
PLN02846	462	digalactosyldiacylglycerol synthase	99.97
cd03817	374	GT1_UGDG_like This family is most closely related	99.97
PHA01633	335	putative glycosyl transferase group 1	99.97
PRK10125	405	putative glycosyl transferase; Provisional	99.97
PLN00142	815	sucrose synthase	99.97
cd03811	353	GT1_WabH_like This family is most closely related	99.97
cd03823	359	GT1_ExpE7_like This family is most closely related	99.97
cd03802	335	GT1_AviGT4_like This family is most closely relate	99.96
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.96
PLN02275	371	transferase, transferring glycosyl groups	99.96
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	99.96
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.94
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.94
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.94
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.93
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.91
PLN02605	382	monogalactosyldiacylglycerol synthase	99.91
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.91
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.9
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.9
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.89
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.88
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.87
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.87
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.84
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.84
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.83
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.83
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.83
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.81
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.81
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.77
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.77
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.76
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.75
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.73
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.69
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.69
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.65
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.62
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.6
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.52
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.47
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.45
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.4
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.36
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.33
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.26
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.22
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.21
TIGR03492	396	conserved hypothetical protein. This protein famil	99.12
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	98.93
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	98.86
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.8
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.78
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	98.75
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	98.71
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	98.7
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	98.68
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	98.62
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	98.6
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.58
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	98.49
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	98.45
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	98.41
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.37
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	98.33
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.25
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	98.18
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.15
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	98.14
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	98.12
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.08
PLN02670	472	transferase, transferring glycosyl groups	98.04
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	98.04
PRK10017	426	colanic acid biosynthesis protein; Provisional	97.83
PLN03004	451	UDP-glycosyltransferase	97.82
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.79
PLN02448	459	UDP-glycosyltransferase family protein	97.78
PLN02562	448	UDP-glycosyltransferase	97.72
PLN02208	442	glycosyltransferase family protein	97.72
PLN03007	482	UDP-glucosyltransferase family protein	97.68
PLN02210	456	UDP-glucosyl transferase	97.66
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	97.6
PLN00164	480	glucosyltransferase; Provisional	97.6
PLN02992	481	coniferyl-alcohol glucosyltransferase	97.56
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	97.55
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	97.53
COG1817	346	Uncharacterized protein conserved in archaea [Func	97.51
PRK14089	347	ipid-A-disaccharide synthase; Provisional	97.48
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	97.45
PLN02173	449	UDP-glucosyl transferase family protein	97.45
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.42
PLN02207	468	UDP-glycosyltransferase	97.36
PLN02152	455	indole-3-acetate beta-glucosyltransferase	97.36
PLN02764	453	glycosyltransferase family protein	97.34
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.33
PLN02554	481	UDP-glycosyltransferase family protein	97.33
PLN03015	470	UDP-glucosyl transferase	97.18
PLN02167	475	UDP-glycosyltransferase family protein	97.06
PLN00414	446	glycosyltransferase family protein	97.02
PLN02534	491	UDP-glycosyltransferase	96.82
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	96.81
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	96.77
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	96.73
PRK14986	815	glycogen phosphorylase; Provisional	96.65
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	96.61
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	96.59
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	96.58
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	96.57
PLN02555	480	limonoid glucosyltransferase	96.54
KOG1050	732	consensus Trehalose-6-phosphate synthase component	96.5
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	96.42
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	96.37
PRK14985	798	maltodextrin phosphorylase; Provisional	96.27
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	96.16
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	96.15
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	96.04
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	95.98
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	95.93
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	95.72
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	95.68
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	95.61
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	95.61
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	95.58
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	95.37
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	95.11
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	95.01
COG4671	400	Predicted glycosyl transferase [General function p	94.9
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	94.44
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.91
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	93.83
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	92.92
KOG3349	170	consensus Predicted glycosyltransferase [General f	91.31
TIGR03646	144	YtoQ_fam YtoQ family protein. Members of this fami	90.85
PF00852	349	Glyco_transf_10: Glycosyltransferase family 10 (fu	90.62
PF11071	141	DUF2872: Protein of unknown function (DUF2872); In	90.52
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	89.58
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	89.25
PF12996	79	DUF3880: DUF based on E. rectale Gene description	89.12
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	89.06
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	86.02
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	84.47
KOG2619	372	consensus Fucosyltransferase [Carbohydrate transpo	83.18
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	83.08
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	81.72
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	80.84
PF05686	395	Glyco_transf_90: Glycosyl transferase family 90; I	80.54

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=6.9e-45  Score=318.87  Aligned_cols=288  Identities=79%  Similarity=1.315  Sum_probs=254.5

Q ss_pred             ccccccceeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHH
Q 022615            2 SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR   81 (294)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~   81 (294)
                      ++|+|.+.+.+.+...+..+.++.+++++++.+|.++++|+.+++.+.+.+..+.+++.++|||+|.+.|.+.......+
T Consensus       174 ~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~  253 (465)
T PLN02871        174 SYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMR  253 (465)
T ss_pred             EEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHH
Confidence            56777776665554444445555678899999999999999999999987655567999999999999887754444444


Q ss_pred             HHhhcCCCCCceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCC
Q 022615           82 WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGD  161 (294)
Q Consensus        82 ~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad  161 (294)
                      .+.....++.++|+|+|++++.||++.++++++.+++++|+|+|+|++.+.++++....+|.|+|+++++++..+|+.||
T Consensus       254 ~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD  333 (465)
T PLN02871        254 ARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGD  333 (465)
T ss_pred             HHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence            33333344678899999999999999999999999999999999999999999988888999999999999999999999


Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCC---CcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHH
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD---GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA  238 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~---~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~  238 (294)
                      ++++||..|++|++++|||+||+|||+++.++..|++   .+   +.+|++++++|+++++++|.++++|++.+++++++
T Consensus       334 v~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv---~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~  410 (465)
T PLN02871        334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDII---PPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAA  410 (465)
T ss_pred             EEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhh---hcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999   66   89999999999999999999999999999999999


Q ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHhhcCCCccc
Q 022615          239 ARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN  292 (294)
Q Consensus       239 ~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (294)
                      +++.+++|+|+..++++++.+|++++..+++++.+.+.+..+.+...+++...|
T Consensus       411 a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  464 (465)
T PLN02871        411 AREEVEKWDWRAATRKLRNEQYSAAIWFWRKKRAQLLGPVQWLPAQLFPAPEVN  464 (465)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccccC
Confidence            999998999999999999668999999999999999999999999999987765

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=4.8e-37  Score=264.10  Aligned_cols=224  Identities=25%  Similarity=0.377  Sum_probs=198.8

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ...+..++++|.++++|+..++.+.+. +.+++++.++|||+|.+.|.+....         ...+.+.|+++|++.+.|
T Consensus       166 ~~~~~~~~~ad~vv~~S~~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~---------~~~~~~~il~vGrl~~~K  235 (406)
T PRK15427        166 PEYQQLFRRGDLMLPISDLWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVK---------APATPLEIISVARLTEKK  235 (406)
T ss_pred             HHHHHHHHhCCEEEECCHHHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccc---------cCCCCeEEEEEeCcchhc
Confidence            356778899999999999999999875 5677899999999999888653221         123456799999999999


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCC------C
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSES------E  170 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~------e  170 (294)
                      |++.++++++.+    +++++.|+|+|+..+.+++++++.    +|.+.|+++++++.++|+.||++++||..      |
T Consensus       236 g~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~E  315 (406)
T PRK15427        236 GLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDME  315 (406)
T ss_pred             CHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCcc
Confidence            999999999766    579999999999888888877643    59999999999999999999999999974      9


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHH-HhCCH
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDW  248 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~-~~~s~  248 (294)
                      |+|++++|||+||+|||+|+.++..|++   .++.+|++++++|+++++++|.++++ |++.+.+|++++++.+ ++|+|
T Consensus       316 g~p~~llEAma~G~PVI~t~~~g~~E~v---~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~  392 (406)
T PRK15427        316 GIPVALMEAMAVGIPVVSTLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ  392 (406)
T ss_pred             CccHHHHHHHhCCCCEEEeCCCCchhhh---cCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence            9999999999999999999999999999   88999999999999999999999999 9999999999999998 56999


Q ss_pred             HHHHHHHHHHHHHH
Q 022615          249 RAATRTIRNEQYNA  262 (294)
Q Consensus       249 ~~~~~~~~~~l~~~  262 (294)
                      +..++++. .+|++
T Consensus       393 ~~~~~~l~-~~~~~  405 (406)
T PRK15427        393 QVINRELA-SLLQA  405 (406)
T ss_pred             HHHHHHHH-HHHhh
Confidence            99999998 67764

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=7.7e-36  Score=255.68  Aligned_cols=234  Identities=26%  Similarity=0.391  Sum_probs=201.0

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      +++.+...+.+|.++++|+.+++.+.+.++.+++++.+||||+|.+.+.+.........+.....++.++++++|++.+.
T Consensus       127 ~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~  206 (374)
T TIGR03088       127 RWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAV  206 (374)
T ss_pred             HHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcc
Confidence            34566667789999999999999998887777789999999999988866532222222222234567899999999999


Q ss_pred             ccHHHHHHHHHhC----C----CcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCC
Q 022615          104 KSLDFLKRVMDRL----P----EARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus       104 k~~~~l~~~~~~~----~----~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      ||++.+++++..+    +    +++|+++|.|+..+.+++.++..    ++.+.|..  +|+.++|+.||++++||..||
T Consensus       207 Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg  284 (374)
T TIGR03088       207 KDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPSLAEG  284 (374)
T ss_pred             cCHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEecccccc
Confidence            9999999998764    2    68999999998888887776643    47788865  899999999999999999999


Q ss_pred             cchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHH
Q 022615          172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRA  250 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~  250 (294)
                      +|++++|||+||+|||+++.++..|++   .++.+|++++++|+++++++|..++++++.+.++++++++.+ ++|+|+.
T Consensus       285 ~~~~~lEAma~G~Pvv~s~~~g~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~  361 (374)
T TIGR03088       285 ISNTILEAMASGLPVIATAVGGNPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINA  361 (374)
T ss_pred             CchHHHHHHHcCCCEEEcCCCCcHHHh---cCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999999   888999999999999999999999999999999999999998 5799999


Q ss_pred             HHHHHHHHHHHHH
Q 022615          251 ATRTIRNEQYNAA  263 (294)
Q Consensus       251 ~~~~~~~~l~~~~  263 (294)
                      +++++. .+|+++
T Consensus       362 ~~~~~~-~~y~~~  373 (374)
T TIGR03088       362 MVAAYA-GLYDQL  373 (374)
T ss_pred             HHHHHH-HHHHHh
Confidence            999999 899875

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=3.7e-35  Score=254.00  Aligned_cols=236  Identities=29%  Similarity=0.427  Sum_probs=202.8

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      .+.+++.+++++|.++++|+...+.+...++.+.+++.+||||+|.+.+.+.. ....+.+.. ..++.++|+|+|++.+
T Consensus       153 ~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~-~~~~~~~~~-~~~~~~~i~~~G~l~~  230 (405)
T TIGR03449       153 RRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGD-RATERARLG-LPLDTKVVAFVGRIQP  230 (405)
T ss_pred             HHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCc-HHHHHHhcC-CCCCCcEEEEecCCCc
Confidence            34567889999999999999999988887777778999999999998886542 222233322 2346789999999999


Q ss_pred             cccHHHHHHHHHhC----CC--cEEEEEcC----C-ccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeec
Q 022615          103 EKSLDFLKRVMDRL----PE--ARIAFIGD----G-PYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus       103 ~k~~~~l~~~~~~~----~~--~~l~i~G~----~-~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      .||++.++++++.+    ++  ++|+|+|.    | +..+.++++++.    .+|.+.|+++++++.++|+.||++++||
T Consensus       231 ~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps  310 (405)
T TIGR03449       231 LKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPS  310 (405)
T ss_pred             ccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECC
Confidence            99999999999765    55  89999995    3 344566666553    3699999999999999999999999999


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCC
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s  247 (294)
                      ..|++|++++|||++|+|||+++.++..+++   .++.+|++++++|.++++++|.+++++++.++++++++++.+++|+
T Consensus       311 ~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i---~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~fs  387 (405)
T TIGR03449       311 YNESFGLVAMEAQACGTPVVAARVGGLPVAV---ADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFS  387 (405)
T ss_pred             CCCCcChHHHHHHHcCCCEEEecCCCcHhhh---ccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999   7889999999999999999999999999999999999999888899


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYNAAI  264 (294)
Q Consensus       248 ~~~~~~~~~~~l~~~~~  264 (294)
                      |+.+++++. .+|++++
T Consensus       388 w~~~~~~~~-~~y~~~~  403 (405)
T TIGR03449       388 WAATADGLL-SSYRDAL  403 (405)
T ss_pred             HHHHHHHHH-HHHHHHh
Confidence            999999999 8998865

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=4.4e-35  Score=253.90  Aligned_cols=238  Identities=19%  Similarity=0.267  Sum_probs=202.0

Q ss_pred             cccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch--HHHHHhhcCCCCCceEEEe
Q 022615           20 VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHV   97 (294)
Q Consensus        20 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~   97 (294)
                      .+....+++++++.+|.++++|+.+++.+.+. +.++.++.+||||+|.+.+.+.....  ..+.+. ...++.++++|+
T Consensus       158 ~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~  235 (412)
T PRK10307        158 ARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQL-GLPDGKKIVLYS  235 (412)
T ss_pred             HHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHHc-CCCCCCEEEEEc
Confidence            34455689999999999999999999999875 45677999999999998876543221  222222 223456789999


Q ss_pred             ecccccccHHHHHHHHHhC---CCcEEEEEcCCccHHHHHhhhcCC---CeEEEecccchhHHHHHhcCCEEEeecCCCC
Q 022615           98 GRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus        98 G~~~~~k~~~~l~~~~~~~---~~~~l~i~G~~~~~~~~~~~~~~~---~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      |++.+.||++.++++++.+   ++++|+|+|+|+..+.++++++..   +|.++|+++++++.++|+.||++++|+..|+
T Consensus       236 G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~  315 (412)
T PRK10307        236 GNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGA  315 (412)
T ss_pred             CccccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccCc
Confidence            9999999999999999876   579999999999888887776533   6999999999999999999999999999887


Q ss_pred             ----cchHHHHHHhcCCCEEeecCCC--cccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-
Q 022615          172 ----LGLVVLEAMSSGIPVVGVRAGG--IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-  244 (294)
Q Consensus       172 ----~~~~~~Ea~a~G~pvI~~~~~~--~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-  244 (294)
                          +|.+++|||+||+|||+++.++  ..+++   .  .+|++++++|+++++++|.++++|++.+++|++++++.++ 
T Consensus       316 ~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i---~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~  390 (412)
T PRK10307        316 ADLVLPSKLTNMLASGRNVVATAEPGTELGQLV---E--GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAER  390 (412)
T ss_pred             ccccCcHHHHHHHHcCCCEEEEeCCCchHHHHH---h--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence                6889999999999999998876  45777   4  6899999999999999999999999999999999999985 


Q ss_pred             hCCHHHHHHHHHHHHHHHHHH
Q 022615          245 KYDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       245 ~~s~~~~~~~~~~~l~~~~~~  265 (294)
                      +|||+.+++++. .+|+++++
T Consensus       391 ~fs~~~~~~~~~-~~~~~~~~  410 (412)
T PRK10307        391 TLDKENVLRQFI-ADIRGLVA  410 (412)
T ss_pred             HcCHHHHHHHHH-HHHHHHhc
Confidence            699999999998 78888764

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=3.3e-34  Score=246.83  Aligned_cols=236  Identities=27%  Similarity=0.454  Sum_probs=198.6

Q ss_pred             cHHHHHHHHHHhCCeEEecchhhHHHHHHhc-cCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           22 PMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      ...++++..++.+|.++++|+.+++.+.+.+ +.+.+++.++|||+|.+.+.+. .....+.+.. ..++.++++|+|++
T Consensus       133 ~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~Grl  210 (388)
T TIGR02149       133 LSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRYG-IDRSRPYILFVGRI  210 (388)
T ss_pred             HHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC-chHHHHHHhC-CCCCceEEEEEccc
Confidence            3457789999999999999999999998876 4556789999999999887654 2222333332 24566789999999


Q ss_pred             cccccHHHHHHHHHhC-CCcEEEEEcCCccH----HHHHhhhcC-----CCeEEE-ecccchhHHHHHhcCCEEEeecCC
Q 022615          101 GVEKSLDFLKRVMDRL-PEARIAFIGDGPYR----EELEKMFTG-----MPAVFT-GMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~-~~~~l~i~G~~~~~----~~~~~~~~~-----~~v~~~-g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      .+.||++.++++++.+ ++++++++|.|...    +.+++....     .++.+. |.++.+++..+|+.||++++||..
T Consensus       211 ~~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~  290 (388)
T TIGR02149       211 TRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIY  290 (388)
T ss_pred             ccccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCcc
Confidence            9999999999999987 47899998876543    333333322     236654 678999999999999999999999


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCH------HHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDL------DDCLSKLEPLLYNQELRETMGQAARQEM  243 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~------~~l~~~i~~ll~~~~~~~~~~~~~~~~~  243 (294)
                      |++|.+++|||+||+|||+++.++..|++   .++.+|++++++|.      ++++++|.+++++++.++++++++++.+
T Consensus       291 e~~g~~~lEA~a~G~PvI~s~~~~~~e~i---~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~  367 (388)
T TIGR02149       291 EPLGIVNLEAMACGTPVVASATGGIPEVV---VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRA  367 (388)
T ss_pred             CCCChHHHHHHHcCCCEEEeCCCCHHHHh---hCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999   78889999999888      9999999999999999999999999987


Q ss_pred             -HhCCHHHHHHHHHHHHHHHH
Q 022615          244 -EKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       244 -~~~s~~~~~~~~~~~l~~~~  263 (294)
                       ++|+|+.+++++. .+|+++
T Consensus       368 ~~~~s~~~~~~~~~-~~y~~~  387 (388)
T TIGR02149       368 EEEFSWGSIAKKTV-EMYRKV  387 (388)
T ss_pred             HHhCCHHHHHHHHH-HHHHhh
Confidence             5799999999999 899875

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=5e-34  Score=243.88  Aligned_cols=219  Identities=34%  Similarity=0.509  Sum_probs=194.5

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      .+.+++.+++.+|.++++|+.+++.+.+. +.++.++.++|||+|.+.+.+...           ..+...++|+|++.+
T Consensus       132 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~~-----------~~~~~~i~~~G~~~~  199 (367)
T cd05844         132 YARRRRRLARRAALFIAVSQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPATP-----------ARRPPRILFVGRFVE  199 (367)
T ss_pred             HHHHHHHHHHhcCEEEECCHHHHHHHHHc-CCCHHHeEEecCCCCHHhcCCCCC-----------CCCCcEEEEEEeecc
Confidence            45678888999999999999999999886 456678999999999887755321           235678999999999


Q ss_pred             cccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecC------
Q 022615          103 EKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSE------  168 (294)
Q Consensus       103 ~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~------  168 (294)
                      .||++.+++++..+    ++++|+++|.|+..+.++++++.    .+|.+.|+++++++..+|+.||++++||.      
T Consensus       200 ~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~  279 (367)
T cd05844         200 KKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGD  279 (367)
T ss_pred             ccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCC
Confidence            99999999998765    68999999999877777777654    36999999999999999999999999986      


Q ss_pred             CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCC
Q 022615          169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYD  247 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s  247 (294)
                      .||+|++++|||+||+|||+++.++..+++   .++.+|+++++.|+++++++|.+++++++.+.+++.++++.+ ++|+
T Consensus       280 ~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s  356 (367)
T cd05844         280 AEGLPVVLLEAQASGVPVVATRHGGIPEAV---EDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFD  356 (367)
T ss_pred             ccCCchHHHHHHHcCCCEEEeCCCCchhhe---ecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCC
Confidence            489999999999999999999999999999   788999999999999999999999999999999999999998 5699


Q ss_pred             HHHHHHHHH
Q 022615          248 WRAATRTIR  256 (294)
Q Consensus       248 ~~~~~~~~~  256 (294)
                      |+..++++.
T Consensus       357 ~~~~~~~l~  365 (367)
T cd05844         357 LRRQTAKLE  365 (367)
T ss_pred             HHHHHHHHh
Confidence            999999886

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.2e-34  Score=245.88  Aligned_cols=224  Identities=21%  Similarity=0.271  Sum_probs=186.6

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeec-cccccc
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-LGVEKS  105 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-~~~~k~  105 (294)
                      ....++.+|.+|++|+++++.+.+.+   .+++.+||||+|.+.+.+...............++.++++|+|+ +.+.||
T Consensus       150 ~~~~~~~ad~vi~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg  226 (396)
T cd03818         150 ILLALAQADAGVSPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRG  226 (396)
T ss_pred             hHHHHHhCCEEECCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccC
Confidence            45678999999999999999987754   36899999999999887653221111111111346678999997 999999


Q ss_pred             HHHHHHHHHhC----CCcEEEEEcCCc------------cHHHH-Hhhhc---CCCeEEEecccchhHHHHHhcCCEEEe
Q 022615          106 LDFLKRVMDRL----PEARIAFIGDGP------------YREEL-EKMFT---GMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus       106 ~~~l~~~~~~~----~~~~l~i~G~~~------------~~~~~-~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ++.+++++..+    ++++++|+|++.            ..+.+ +++..   ..+|.++|+++++++..+|+.||++++
T Consensus       227 ~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~  306 (396)
T cd03818         227 FHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVY  306 (396)
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEE
Confidence            99999998654    789999999632            12222 23222   347999999999999999999999999


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHh
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  245 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  245 (294)
                      ||..|++|.+++||||||+|||+++.++..|++   .++.+|+++++.|+++++++|.+++++++.+.+|++++++.+++
T Consensus       307 ~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~  383 (396)
T cd03818         307 LTYPFVLSWSLLEAMACGCLVVGSDTAPVREVI---TDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALR  383 (396)
T ss_pred             cCcccccchHHHHHHHCCCCEEEcCCCCchhhc---ccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999   88899999999999999999999999999999999999999965


Q ss_pred             -CCHHHHHHHHH
Q 022615          246 -YDWRAATRTIR  256 (294)
Q Consensus       246 -~s~~~~~~~~~  256 (294)
                       |+|+.++++++
T Consensus       384 ~fs~~~~~~~~~  395 (396)
T cd03818         384 YDLLSVCLPRQL  395 (396)
T ss_pred             hccHHHHHHHHh
Confidence             99999998886

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=1.1e-33  Score=241.75  Aligned_cols=229  Identities=25%  Similarity=0.430  Sum_probs=188.9

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      ++...+.+++.++++|+++++.+.+.+  +..++.+||||+|...+.+... ...+.... ..++..+++|+|++.+.||
T Consensus       132 ~~~~~~~~~~~ii~~S~~~~~~~~~~~--~~~~i~vIpngvd~~~~~~~~~-~~~~~~~~-~~~~~~~il~~Grl~~~Kg  207 (380)
T PRK15484        132 FEPELLDKNAKIIVPSQFLKKFYEERL--PNADISIVPNGFCLETYQSNPQ-PNLRQQLN-ISPDETVLLYAGRISPDKG  207 (380)
T ss_pred             cChhHhccCCEEEEcCHHHHHHHHhhC--CCCCEEEecCCCCHHHcCCcch-HHHHHHhC-CCCCCeEEEEeccCccccC
Confidence            344566789999999999999998764  4568999999999887765422 22222222 2345678999999999999


Q ss_pred             HHHHHHHHHhC----CCcEEEEEcCCcc---------HHHHHhhhc--CCCeEEEecccchhHHHHHhcCCEEEeecC-C
Q 022615          106 LDFLKRVMDRL----PEARIAFIGDGPY---------REELEKMFT--GMPAVFTGMLLGEELSQAYASGDVFVMPSE-S  169 (294)
Q Consensus       106 ~~~l~~~~~~~----~~~~l~i~G~~~~---------~~~~~~~~~--~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~  169 (294)
                      ++.+++++..+    |+++|+|+|+|+.         .+.+++++.  ..++.+.|+++.+++..+|+.||++++||. .
T Consensus       208 ~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~  287 (380)
T PRK15484        208 ILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVE  287 (380)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCc
Confidence            99999999765    7899999998753         123444433  236899999999999999999999999997 5


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCcccccccCCCCccee-ecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCC
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYD  247 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~-~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s  247 (294)
                      |+||++++|||+||+|||+++.++..|++   .++.+|+ ++++.|+++++++|..+++|++. .++++++++.+ ++|+
T Consensus       288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv---~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fs  363 (380)
T PRK15484        288 EAFCMVAVEAMAAGKPVLASTKGGITEFV---LEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQAKDFVFSKYS  363 (380)
T ss_pred             cccccHHHHHHHcCCCEEEeCCCCcHhhc---ccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999   8889998 56788999999999999999875 78999999887 6799


Q ss_pred             HHHHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYNAA  263 (294)
Q Consensus       248 ~~~~~~~~~~~l~~~~  263 (294)
                      |+.+++++. ++|+..
T Consensus       364 w~~~a~~~~-~~l~~~  378 (380)
T PRK15484        364 WEGVTQRFE-EQIHNW  378 (380)
T ss_pred             HHHHHHHHH-HHHHHh
Confidence            999999998 677654

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.7e-34  Score=252.16  Aligned_cols=224  Identities=28%  Similarity=0.378  Sum_probs=192.0

Q ss_pred             cHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           22 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      .++.+.+.+++.||.|+++|+..++.+.+ .+.+++++.+||||+|.+.+.+....        ...++.++|+++|++.
T Consensus       233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------~~~~~~~~i~~vGrl~  303 (475)
T cd03813         233 FFESLGRLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------RPEKEPPVVGLIGRVV  303 (475)
T ss_pred             HHHHHHHHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc--------ccCCCCcEEEEEeccc
Confidence            34567788999999999999999988766 45677899999999999887664321        1234678999999999


Q ss_pred             ccccHHHHHHHHHhC----CCcEEEEEcCCcc----HHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615          102 VEKSLDFLKRVMDRL----PEARIAFIGDGPY----REELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~----~~~~l~i~G~~~~----~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      +.||++.++++++.+    |+++++|+|.++.    .+.+++++++    .+|.++|   .+++.++|+.+|++++||..
T Consensus       304 ~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~  380 (475)
T cd03813         304 PIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSIS  380 (475)
T ss_pred             cccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchh
Confidence            999999999998654    7899999998742    3445555542    4689999   58999999999999999999


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCcccccccCCC------CcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD------GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  243 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~------~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  243 (294)
                      |++|++++|||+||+|||+|+.++..+++   .+      +.+|+++++.|+++++++|.++++|++.++++++++++.+
T Consensus       381 Eg~p~~vlEAma~G~PVVatd~g~~~elv---~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v  457 (475)
T cd03813         381 EGQPLVILEAMAAGIPVVATDVGSCRELI---EGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRV  457 (475)
T ss_pred             hcCChHHHHHHHcCCCEEECCCCChHHHh---cCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999   55      5699999999999999999999999999999999999998


Q ss_pred             Hh-CCHHHHHHHHHHHHHH
Q 022615          244 EK-YDWRAATRTIRNEQYN  261 (294)
Q Consensus       244 ~~-~s~~~~~~~~~~~l~~  261 (294)
                      ++ |+|+.+++++. .+|+
T Consensus       458 ~~~~s~~~~~~~y~-~lY~  475 (475)
T cd03813         458 ERYYTLERMIDSYR-RLYL  475 (475)
T ss_pred             HHhCCHHHHHHHHH-HHhC
Confidence            55 99999999998 7874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=9.4e-34  Score=245.30  Aligned_cols=228  Identities=16%  Similarity=0.238  Sum_probs=186.0

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      ++++..+.+|.|+++|+++++.+.+.++. ++++.++++|+|...+......         ..++...++++|++.++||
T Consensus       213 l~~~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~~~~---------~~~~~~~il~vGR~~~~Kg  282 (463)
T PLN02949        213 MYGLVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQALPLE---------RSEDPPYIISVAQFRPEKA  282 (463)
T ss_pred             HHHHHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccCCcc---------ccCCCCEEEEEEeeeccCC
Confidence            55666688999999999999999887765 3578999999987655322111         1234568999999999999


Q ss_pred             HHHHHHHHHhC--------CCcEEEEEcCCcc------HHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeec
Q 022615          106 LDFLKRVMDRL--------PEARIAFIGDGPY------REELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus       106 ~~~l~~~~~~~--------~~~~l~i~G~~~~------~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      ++.+++++..+        ++++|+|+|++..      .+.+++++.+    .+|.|.|.++.+++.++|+.||++++|+
T Consensus       283 ~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s  362 (463)
T PLN02949        283 HALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSM  362 (463)
T ss_pred             HHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCC
Confidence            99999998752        5799999998632      2345555553    3699999999999999999999999999


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCCcc-cccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHh
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGGIP-DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEK  245 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~~-e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~  245 (294)
                      ..|+||++++|||++|+|||+++.+|.. +++.+...+.+|++++  |+++++++|.++++ +++.+++|++++++.+++
T Consensus       363 ~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~  440 (463)
T PLN02949        363 IDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR  440 (463)
T ss_pred             ccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999988754 6662212266888875  99999999999998 567888999999999988


Q ss_pred             CCHHHHHHHHHHHHHHHHHHH
Q 022615          246 YDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       246 ~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      |||+.+++++. ..+++++++
T Consensus       441 FS~e~~~~~~~-~~i~~l~~~  460 (463)
T PLN02949        441 FSEQRFNEDFK-DAIRPILNS  460 (463)
T ss_pred             cCHHHHHHHHH-HHHHHHHhh
Confidence            99999999998 677777654

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-33  Score=239.31  Aligned_cols=247  Identities=45%  Similarity=0.737  Sum_probs=206.5

Q ss_pred             cccccceeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHH
Q 022615            3 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRW   82 (294)
Q Consensus         3 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~   82 (294)
                      +|..++.+.......+..+..+.+.+++++.+|.++++|+.+.+.+.+.+   ..++.++++|+|...+.+.......+.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~  190 (364)
T cd03814         114 YHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARG---FRRVRLWPRGVDTELFHPRRRDEALRA  190 (364)
T ss_pred             EecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccC---CCceeecCCCccccccCcccccHHHHH
Confidence            34444444433333444444467888999999999999999999766543   358899999999988876544333332


Q ss_pred             HhhcCCCCCceEEEeecccccccHHHHHHHHHhCC---CcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhc
Q 022615           83 RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP---EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        83 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~---~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      ...  ..+.+.++|+|++.+.||++.++++++.+.   +++++++|.++....++  ....+|.+.|+++.+++.++|+.
T Consensus       191 ~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~--~~~~~v~~~g~~~~~~~~~~~~~  266 (364)
T cd03814         191 RLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPARARLE--ARYPNVHFLGFLDGEELAAAYAS  266 (364)
T ss_pred             HhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchHHHHh--ccCCcEEEEeccCHHHHHHHHHh
Confidence            222  345678999999999999999999998874   69999999988776665  23457999999999999999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      ||++++|+..|++|++++|||+||+|||+++.++..+++   .++.+|+++++.|.++++++|.+++.+++.++++++++
T Consensus       267 ~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i---~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~  343 (364)
T cd03814         267 ADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIV---TDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA  343 (364)
T ss_pred             CCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhh---cCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999   77899999999999999999999999999999999999


Q ss_pred             HHHHHhCCHHHHHHHHHHHHH
Q 022615          240 RQEMEKYDWRAATRTIRNEQY  260 (294)
Q Consensus       240 ~~~~~~~s~~~~~~~~~~~l~  260 (294)
                      ++.+++|+|+.+++++. .+|
T Consensus       344 ~~~~~~~~~~~~~~~~~-~~~  363 (364)
T cd03814         344 RAEAERRSWEAFLDNLL-EAY  363 (364)
T ss_pred             HHHHhhcCHHHHHHHHH-Hhh
Confidence            99998899999999998 565

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=1.7e-33  Score=245.03  Aligned_cols=229  Identities=21%  Similarity=0.310  Sum_probs=183.7

Q ss_pred             HHHHHHHhCCeEEecchhhH-HHHHHhccCCcCceEEeeccccCCCCCCCccchH---HH--HHhhcCCCCCceEEEeec
Q 022615           26 VIKFLHRAADLTLVPSVAIG-KDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE---MR--WRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~-~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~---~~--~~~~~~~~~~~~i~~~G~   99 (294)
                      .+++.++.+|.|+++|.... +.+....+.+++++.+||||+|.+.|.+......   .+  .+.....++.++|+++|+
T Consensus       177 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr  256 (439)
T TIGR02472       177 AEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISR  256 (439)
T ss_pred             HHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcC
Confidence            47788999999999986543 3344444567789999999999998876432211   11  111123345678999999


Q ss_pred             ccccccHHHHHHHHHhCC----CcEEE-EEcCCccHHH-----------HHhhhc----CCCeEEEecccchhHHHHHhc
Q 022615          100 LGVEKSLDFLKRVMDRLP----EARIA-FIGDGPYREE-----------LEKMFT----GMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~~----~~~l~-i~G~~~~~~~-----------~~~~~~----~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      +.+.||++.+++++..++    ..+++ ++|+|+..+.           +..++.    ..+|.|.|+++.+++.++|+.
T Consensus       257 l~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~  336 (439)
T TIGR02472       257 PDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRL  336 (439)
T ss_pred             CcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHH
Confidence            999999999999997542    23444 5687654321           222222    235999999999999999998


Q ss_pred             C----CEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHH
Q 022615          160 G----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       160 a----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      |    |++++||..|+||++++|||+||+|||+|+.++..|++   .++.+|+++++.|+++++++|.++++|++.++++
T Consensus       337 a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~  413 (439)
T TIGR02472       337 AARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDII---ANCRNGLLVDVLDLEAIASALEDALSDSSQWQLW  413 (439)
T ss_pred             HhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHh---cCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence            7    99999999999999999999999999999999999999   7889999999999999999999999999999999


Q ss_pred             HHHHHHHH-HhCCHHHHHHHHHH
Q 022615          236 GQAARQEM-EKYDWRAATRTIRN  257 (294)
Q Consensus       236 ~~~~~~~~-~~~s~~~~~~~~~~  257 (294)
                      ++++++.+ ++|||+.+++++.+
T Consensus       414 ~~~a~~~~~~~fsw~~~~~~~~~  436 (439)
T TIGR02472       414 SRNGIEGVRRHYSWDAHVEKYLR  436 (439)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999987 56999999999984

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7e-34  Score=245.08  Aligned_cols=227  Identities=22%  Similarity=0.318  Sum_probs=190.2

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCc-eEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~-i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      ..++++++++.+|.|+++|+.+++.+.+.++....+ +.+++||+|.+.+.+.....  ........++.++++++|++.
T Consensus       144 ~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~--~~~~~~~~~~~~~i~~~grl~  221 (392)
T cd03805         144 FDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP--DPGLLIPKSGKKTFLSINRFE  221 (392)
T ss_pred             HHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc--cccccccCCCceEEEEEeeec
Confidence            456788899999999999999999998876533333 45999999988776543221  111122345678899999999


Q ss_pred             ccccHHHHHHHHHhC-------CCcEEEEEcCCccH--------HHHHhhhcC-----CCeEEEecccchhHHHHHhcCC
Q 022615          102 VEKSLDFLKRVMDRL-------PEARIAFIGDGPYR--------EELEKMFTG-----MPAVFTGMLLGEELSQAYASGD  161 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~-------~~~~l~i~G~~~~~--------~~~~~~~~~-----~~v~~~g~~~~~~~~~~~~~ad  161 (294)
                      +.||++.++++++++       ++++|+++|.++..        +.+++++++     .+|.+.|+++++++..+|+.||
T Consensus       222 ~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad  301 (392)
T cd03805         222 RKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSAR  301 (392)
T ss_pred             ccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCe
Confidence            999999999999765       58999999987542        455555544     4699999999999999999999


Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                      ++++||..|++|++++|||+||+|||+++.++..+++   .++.+|+++++ |+++++++|..++++++.++++++++++
T Consensus       302 ~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i---~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~  377 (392)
T cd03805         302 ALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK  377 (392)
T ss_pred             EEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHh---ccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999   77889999876 8999999999999999999999999999


Q ss_pred             HH-HhCCHHHHHHHH
Q 022615          242 EM-EKYDWRAATRTI  255 (294)
Q Consensus       242 ~~-~~~s~~~~~~~~  255 (294)
                      .+ ++|+|+.+++++
T Consensus       378 ~~~~~~s~~~~~~~~  392 (392)
T cd03805         378 RVKEKFSTEAFAERL  392 (392)
T ss_pred             HHHHhcCHHHHhhhC
Confidence            88 569999998764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-33  Score=242.57  Aligned_cols=227  Identities=23%  Similarity=0.360  Sum_probs=191.2

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      .++.++.++++|.++++|....+.+....+.+.+++.+||||+|.+.|.+....         ..++.++++++|++.+.
T Consensus       135 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~~~~~~i~~~grl~~~  205 (398)
T cd03796         135 NKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RDNDKITIVVISRLVYR  205 (398)
T ss_pred             hHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CCCCceEEEEEeccchh
Confidence            356777889999999999999987655455667899999999998877654221         13467899999999999


Q ss_pred             ccHHHHHHHHHh----CCCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          104 KSLDFLKRVMDR----LPEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       104 k~~~~l~~~~~~----~~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      ||++.+++++..    .++++|+++|+|+..+.+++++...    +|.+.|+++.+++..+|+.||++++||..|++|.+
T Consensus       206 Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~  285 (398)
T cd03796         206 KGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIA  285 (398)
T ss_pred             cCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHH
Confidence            999999999864    4789999999998777777766543    59999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHH
Q 022615          176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRT  254 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~  254 (294)
                      ++|||+||+|||+++.++..|++   .++. +++.. .|.++++++|.+++++......+.+++++.+ ++|||+.++++
T Consensus       286 ~~EAma~G~PVI~s~~gg~~e~i---~~~~-~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  360 (398)
T cd03796         286 IVEAASCGLLVVSTRVGGIPEVL---PPDM-ILLAE-PDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKR  360 (398)
T ss_pred             HHHHHHcCCCEEECCCCCchhhe---eCCc-eeecC-CCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHH
Confidence            99999999999999999999999   5543 34444 4899999999999987665556777777776 56999999999


Q ss_pred             HHHHHHHHHHH
Q 022615          255 IRNEQYNAAIW  265 (294)
Q Consensus       255 ~~~~l~~~~~~  265 (294)
                      +. .+|++++.
T Consensus       361 ~~-~~y~~l~~  370 (398)
T cd03796         361 TE-KVYDRILQ  370 (398)
T ss_pred             HH-HHHHHHhc
Confidence            99 89999875

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=2.3e-33  Score=245.74  Aligned_cols=234  Identities=22%  Similarity=0.343  Sum_probs=188.9

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-c--------cCCcCceEEeeccccCCCCCCCccc------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-R--------VTAANKIRIWKKGVDSESFHPRFRS------------------   77 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-~--------~~~~~~i~~i~~gvd~~~~~~~~~~------------------   77 (294)
                      .+.+..++.+|.|+++|+..++.+... +        ..+.+++.+||||+|.+.|.|....                  
T Consensus       189 ~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k  268 (466)
T PRK00654        189 SFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENK  268 (466)
T ss_pred             cHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHH
Confidence            456778899999999999999888652 1        2346789999999999998775321                  


Q ss_pred             hHHHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcCC--CeEE-Eecccc
Q 022615           78 SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVF-TGMLLG  150 (294)
Q Consensus        78 ~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~~--~v~~-~g~~~~  150 (294)
                      ...+.+.+...++.++|+++|++.+.||++.+++++..+  .+++|+|+|.|+  ..+.++++.++.  ++.+ .|+ +.
T Consensus       269 ~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~  347 (466)
T PRK00654        269 RALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DE  347 (466)
T ss_pred             HHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CH
Confidence            122333333334678999999999999999999999876  479999999875  345666666543  4554 454 55


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC------cceeecCCCCHHHHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG------KIGYLFNPGDLDDCLSKLEP  224 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~------~~g~~~~~~d~~~l~~~i~~  224 (294)
                      +.+..+|+.||++++||..|++|++++|||+||+|+|+++.++..|.+   .++      .+|+++++.|+++++++|.+
T Consensus       348 ~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v---~~~~~~~~~~~G~lv~~~d~~~la~~i~~  424 (466)
T PRK00654        348 ALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTV---IDYNPEDGEATGFVFDDFNAEDLLRALRR  424 (466)
T ss_pred             HHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCcccee---ecCCCCCCCCceEEeCCCCHHHHHHHHHH
Confidence            667799999999999999999999999999999999999999999999   666      89999999999999999999


Q ss_pred             Hhh---ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022615          225 LLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       225 ll~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~  265 (294)
                      ++.   +++.+.+++.++.+  ++|||+.+++++. ++|++++.
T Consensus       425 ~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~lY~~~~~  465 (466)
T PRK00654        425 ALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYL-ELYRRLLG  465 (466)
T ss_pred             HHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHHHHHhh
Confidence            876   66667777776653  5799999999998 89998764

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-32  Score=236.08  Aligned_cols=231  Identities=26%  Similarity=0.487  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      ++.+.+..++++|.++++|+.+++.+.+.++ ..+++.++|||+|...+.+.... ..+.+. ...++.++++++|++.+
T Consensus       132 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~~~-~~~~~~-~~~~~~~~il~~g~l~~  208 (371)
T cd04962         132 FQPATRFSIEKSDGVTAVSESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKPDE-ALKRRL-GAPEGEKVLIHISNFRP  208 (371)
T ss_pred             chHHHHHHHhhCCEEEEcCHHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCchH-HHHHhc-CCCCCCeEEEEeccccc
Confidence            4567888999999999999999999988764 45789999999998776553221 222222 23446778999999999


Q ss_pred             cccHHHHHHHHHhC---CCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          103 EKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       103 ~k~~~~l~~~~~~~---~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      .||++.+++++..+   .+++++++|.|++.+.+++.+...    +|.+.|+.  +++.++|+.||++++||..|++|++
T Consensus       209 ~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~  286 (371)
T cd04962         209 VKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLA  286 (371)
T ss_pred             ccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccH
Confidence            99999999999766   368999999998887777766543    59999976  7899999999999999999999999


Q ss_pred             HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHH
Q 022615          176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRT  254 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~  254 (294)
                      ++|||+||+|||+++.++..+++   .++.+|++++++|.+++++++..++++++.+.++++++++.+ ++|+|+.++++
T Consensus       287 ~~EAma~g~PvI~s~~~~~~e~i---~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  363 (371)
T cd04962         287 ALEAMACGVPVVASNAGGIPEVV---KHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQ  363 (371)
T ss_pred             HHHHHHcCCCEEEeCCCCchhhh---cCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            99999999999999999999999   888999999999999999999999999999999999999995 67999999999


Q ss_pred             HHHHHHHH
Q 022615          255 IRNEQYNA  262 (294)
Q Consensus       255 ~~~~l~~~  262 (294)
                      +. .+|++
T Consensus       364 ~~-~~y~~  370 (371)
T cd04962         364 YE-ALYRR  370 (371)
T ss_pred             HH-HHHHh
Confidence            99 78875

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=2.2e-32  Score=245.86  Aligned_cols=240  Identities=19%  Similarity=0.266  Sum_probs=193.4

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhc--------cCCcCceEEeeccccCCCCCCCcc------------------ch
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAAR--------VTAANKIRIWKKGVDSESFHPRFR------------------SS   78 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~--------~~~~~~i~~i~~gvd~~~~~~~~~------------------~~   78 (294)
                      .+.+..+-.||.|+++|+..++.+...+        .....++.+|+||+|.+.|.|...                  ..
T Consensus       685 N~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~  764 (977)
T PLN02939        685 NVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKA  764 (977)
T ss_pred             HHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhH
Confidence            3455566679999999999999987633        245678999999999999987643                  12


Q ss_pred             HHHHHhhcCC--CCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCccH---HHHHhhhcC----CCeEEEec
Q 022615           79 EMRWRLSNGE--PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYR---EELEKMFTG----MPAVFTGM  147 (294)
Q Consensus        79 ~~~~~~~~~~--~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~~---~~~~~~~~~----~~v~~~g~  147 (294)
                      ..+.+.+...  ++.++|+++||+.+.||++.+++++..+  ++++|+|+|.|+..   +.++.+...    .+|.+.|.
T Consensus       765 aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~  844 (977)
T PLN02939        765 ALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK  844 (977)
T ss_pred             HHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec
Confidence            2333443332  3568999999999999999999999765  57999999999653   445554443    35999999


Q ss_pred             ccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC------CCCcceeecCCCCHHHHHHH
Q 022615          148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED------QDGKIGYLFNPGDLDDCLSK  221 (294)
Q Consensus       148 ~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~------~~~~~g~~~~~~d~~~l~~~  221 (294)
                      ++......+|+.||++++||.+|+||++++|||+||+|+|+++.||..+.+.+.      .++.+|+++++.|+++++++
T Consensus       845 ~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~A  924 (977)
T PLN02939        845 YDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSA  924 (977)
T ss_pred             cCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHH
Confidence            877777899999999999999999999999999999999999999999988321      12578999999999999999


Q ss_pred             HHHHhh----ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Q 022615          222 LEPLLY----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       222 i~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                      |.+++.    +++.+.+++.++..  +.|||+.+++++. .+|+.++...
T Consensus       925 L~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYe-eLY~~ll~~~  971 (977)
T PLN02939        925 LERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYE-ELYQRAVARA  971 (977)
T ss_pred             HHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHH-HHHHHHHHhh
Confidence            998764    78888888876543  5799999999998 8999998653

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=7.3e-33  Score=252.32  Aligned_cols=235  Identities=17%  Similarity=0.257  Sum_probs=193.4

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhcc-CC---------------------cCceEEeeccccCCCCCCCccchH---
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARV-TA---------------------ANKIRIWKKGVDSESFHPRFRSSE---   79 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~-~~---------------------~~~i~~i~~gvd~~~~~~~~~~~~---   79 (294)
                      ..++.++..||.||++|...++.+...|+ .+                     ..++.|||||+|...|.|......   
T Consensus       373 ~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~  452 (1050)
T TIGR02468       373 EAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGET  452 (1050)
T ss_pred             HHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchh
Confidence            46899999999999999999987655543 11                     238999999999999987432110   


Q ss_pred             ----------------HHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhCC------CcEEEEEcCCccH-------
Q 022615           80 ----------------MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP------EARIAFIGDGPYR-------  130 (294)
Q Consensus        80 ----------------~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~------~~~l~i~G~~~~~-------  130 (294)
                                      ...+. ...++.++|+++|++.+.||++.|++|+..++      ++. +|+|.++..       
T Consensus       453 ~~~~~~~~~~~~~~~~~l~r~-~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~  530 (1050)
T TIGR02468       453 EGNEEHPAKPDPPIWSEIMRF-FTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGS  530 (1050)
T ss_pred             cccccccccccchhhHHHHhh-cccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccc
Confidence                            01111 13456789999999999999999999998763      344 466865432       


Q ss_pred             ----HHHHhhhcCC----CeEEEecccchhHHHHHhcC----CEEEeecCCCCcchHHHHHHhcCCCEEeecCCCccccc
Q 022615          131 ----EELEKMFTGM----PAVFTGMLLGEELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  198 (294)
Q Consensus       131 ----~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~a----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~  198 (294)
                          ..+.+++...    +|.|.|+++++++..+|+.|    |++++||..|+||++++||||||+|||+|+.++..+++
T Consensus       531 ~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII  610 (1050)
T TIGR02468       531 SSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH  610 (1050)
T ss_pred             hHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHh
Confidence                2334444433    59999999999999999988    69999999999999999999999999999999999999


Q ss_pred             ccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022615          199 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       199 ~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~  265 (294)
                         .++.+|+++++.|+++++++|.++++|++.+++++.++++.+++|+|+.++++++ ..+..+..
T Consensus       611 ---~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl-~~i~~~~~  673 (1050)
T TIGR02468       611 ---RVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYL-SRIASCRP  673 (1050)
T ss_pred             ---ccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHhc
Confidence               8899999999999999999999999999999999999999998899999999999 66666653

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=1.2e-32  Score=240.72  Aligned_cols=233  Identities=22%  Similarity=0.341  Sum_probs=189.9

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhc---------cCCcCceEEeeccccCCCCCCCccc------------------h
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAAR---------VTAANKIRIWKKGVDSESFHPRFRS------------------S   78 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~---------~~~~~~i~~i~~gvd~~~~~~~~~~------------------~   78 (294)
                      +.+..+..+|.|+++|+..++.+.+..         ..+.+++.+|+||+|.+.|.|....                  .
T Consensus       202 ~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~  281 (485)
T PRK14099        202 YLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKA  281 (485)
T ss_pred             HHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHH
Confidence            578889999999999999999987531         1235789999999999988875432                  1


Q ss_pred             HHHHHhhcCC-CCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcCC--Ce-EEEecccc
Q 022615           79 EMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PA-VFTGMLLG  150 (294)
Q Consensus        79 ~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~~--~v-~~~g~~~~  150 (294)
                      ..+.+.+... ++.++++++|++.+.||++.+++++..+  .+++|+|+|.|+  ..+.++++.+..  ++ .++|+  +
T Consensus       282 ~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~  359 (485)
T PRK14099        282 ALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--D  359 (485)
T ss_pred             HHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--C
Confidence            2222333222 3467899999999999999999999876  479999999886  355666665432  44 68887  4


Q ss_pred             hhHHHHH-hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC---------cceeecCCCCHHHHHH
Q 022615          151 EELSQAY-ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLS  220 (294)
Q Consensus       151 ~~~~~~~-~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~---------~~g~~~~~~d~~~l~~  220 (294)
                      +++..+| +.||++++||..|+||++.+|||+||+|+|+++.++..|.+   .++         .+|+++++.|++++++
T Consensus       360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V---~~~~~~~~~~~~~~G~l~~~~d~~~La~  436 (485)
T PRK14099        360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV---VDANEMAIATGVATGVQFSPVTADALAA  436 (485)
T ss_pred             HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCcccee---ecccccccccCCCceEEeCCCCHHHHHH
Confidence            8899887 57999999999999999999999999998889999999988   443         5899999999999999


Q ss_pred             HHHH---HhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 022615          221 KLEP---LLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       221 ~i~~---ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      +|.+   +++|++.+++++++++.  ++|||+..+++++ .+|++++..
T Consensus       437 ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~-~lY~~l~~~  482 (485)
T PRK14099        437 ALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYA-ALYRSLVAE  482 (485)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHH-HHHHHHHhh
Confidence            9997   66788889999988863  6799999999998 899998753

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-32  Score=237.49  Aligned_cols=229  Identities=34%  Similarity=0.501  Sum_probs=195.0

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      ...++.+++.+|.++++|+..++.+.+.+..+..++.++|||+|.+.+.+.......+.... ..+++++|+|+|++.+.
T Consensus       154 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~gr~~~~  232 (398)
T cd03800         154 IEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLL-RDPDKPRILAVGRLDPR  232 (398)
T ss_pred             hhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhc-cCCCCcEEEEEcccccc
Confidence            35678899999999999999999999887766667999999999887766543322122222 24567899999999999


Q ss_pred             ccHHHHHHHHHhCC----CcEEEEEcCCccH------HHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615          104 KSLDFLKRVMDRLP----EARIAFIGDGPYR------EELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus       104 k~~~~l~~~~~~~~----~~~l~i~G~~~~~------~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      ||++.+++++..+.    +++++++|.+...      ..++++.+    ..++.+.|+++.+++..+|+.||++++||..
T Consensus       233 k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~  312 (398)
T cd03800         233 KGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALY  312 (398)
T ss_pred             cCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccc
Confidence            99999999998773    7999999976532      22233332    2469999999999999999999999999999


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCH
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDW  248 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~  248 (294)
                      |++|.+++|||+||+|||+++.++..+++   .++.+|+++++.|+++++++|.+++++++.+.++++++++.+ ++|||
T Consensus       313 e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i---~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~  389 (398)
T cd03800         313 EPFGLTALEAMACGLPVVATAVGGPRDIV---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTW  389 (398)
T ss_pred             cccCcHHHHHHhcCCCEEECCCCCHHHHc---cCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence            99999999999999999999999999999   788899999999999999999999999999999999999998 67999


Q ss_pred             HHHHHHHH
Q 022615          249 RAATRTIR  256 (294)
Q Consensus       249 ~~~~~~~~  256 (294)
                      +.++++++
T Consensus       390 ~~~~~~~~  397 (398)
T cd03800         390 ERVAARLL  397 (398)
T ss_pred             HHHHHHHh
Confidence            99999875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=9.8e-33  Score=229.89  Aligned_cols=222  Identities=17%  Similarity=0.230  Sum_probs=172.9

Q ss_pred             cHHHHHHHH-HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           22 PMWLVIKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        22 ~~~~~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      ..+.++.++ .+++|.++++|+.+++.+.+.+...++++.+||||+|.+.|.+....          ..+..++++.|++
T Consensus        82 l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~----------~~~~~vl~~~g~~  151 (331)
T PHA01630         82 ISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE----------KPHPCVLAILPHS  151 (331)
T ss_pred             hhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc----------cCCCEEEEEeccc
Confidence            344677777 78999999999999999987643224689999999999887654221          1244567788889


Q ss_pred             cccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          101 GVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      .+.||++.++++++.+    ++++++++|.+.....+.    ... .+.+.++.+++..+|+.||++++||..|+||+++
T Consensus       152 ~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~----~~~-~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~  226 (331)
T PHA01630        152 WDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLF----GLN-GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPV  226 (331)
T ss_pred             cccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhc----ccc-ceeccCCHHHHHHHHHhCCEEEECCccccCChHH
Confidence            9999999999999876    579999999765433221    111 1356688999999999999999999999999999


Q ss_pred             HHHHhcCCCEEeecCCCcccccccCCCCcceeecCC-------------------CCHHHHHHHHHHHhhCh--H-HHHH
Q 022615          177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP-------------------GDLDDCLSKLEPLLYNQ--E-LRET  234 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~-------------------~d~~~l~~~i~~ll~~~--~-~~~~  234 (294)
                      +||||||+|||+|+.++..|++   .++.+|++++.                   .|.+++++++.+++.++  + .++.
T Consensus       227 lEAMA~G~PVIas~~gg~~E~i---~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~  303 (331)
T PHA01630        227 IEALALGLDVVVTEKGAWSEWV---LSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKEN  303 (331)
T ss_pred             HHHHHcCCCEEEeCCCCchhhc---cCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHH
Confidence            9999999999999999999999   67766555431                   26788888898888863  4 4445


Q ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 022615          235 MGQAARQEMEKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       235 ~~~~~~~~~~~~s~~~~~~~~~~~l~~~  262 (294)
                      ++.+++...++|||+.+++++. .+|++
T Consensus       304 ~~~~~~~~~~~fs~~~ia~k~~-~l~~~  330 (331)
T PHA01630        304 LEGRAILYRENYSYNAIAKMWE-KILEK  330 (331)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHH-HHHhc
Confidence            5555555568899999999998 67753

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=7.5e-33  Score=241.91  Aligned_cols=212  Identities=22%  Similarity=0.318  Sum_probs=178.7

Q ss_pred             HHhCCeEEecchhhHHHHHHhcc---CCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHH
Q 022615           31 HRAADLTLVPSVAIGKDLEAARV---TAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  107 (294)
Q Consensus        31 ~~~ad~ii~~s~~~~~~~~~~~~---~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~  107 (294)
                      .+.+|.+|++|+..++.+.+.++   .+..++.++|+|++...+.+.            ...+...|+++|++.+.||++
T Consensus       268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~------------~~r~~~~il~vGrl~~~Kg~~  335 (500)
T TIGR02918       268 ADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE------------QERKPFSIITASRLAKEKHID  335 (500)
T ss_pred             hhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc------------cccCCeEEEEEeccccccCHH
Confidence            56789999999999988876543   235689999999865543321            112446899999999999999


Q ss_pred             HHHHHHHh----CCCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          108 FLKRVMDR----LPEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       108 ~l~~~~~~----~~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      .+++|+..    .|+++|.|+|.|+..+.+++++...    +|.+.|+.   ++.++|+.||++++||..||||++++||
T Consensus       336 ~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEA  412 (500)
T TIGR02918       336 WLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEA  412 (500)
T ss_pred             HHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHH
Confidence            99999864    4789999999999888888877643    48888864   6889999999999999999999999999


Q ss_pred             HhcCCCEEeecCC-CcccccccCCCCcceeecCCC----C----HHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHH
Q 022615          180 MSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLFNPG----D----LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  250 (294)
Q Consensus       180 ~a~G~pvI~~~~~-~~~e~~~~~~~~~~g~~~~~~----d----~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~  250 (294)
                      ||||+|||+++.+ +.++++   .++.+|++++++    |    +++++++|..++ +++.+.+|++++++.+++|+|+.
T Consensus       413 ma~G~PVI~~dv~~G~~eiI---~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~~~~~~~~~~~a~~~a~~fs~~~  488 (500)
T TIGR02918       413 VGSGLGMIGFDVNYGNPTFI---EDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-NSNDIDAFHEYSYQIAEGFLTAN  488 (500)
T ss_pred             HHhCCCEEEecCCCCCHHHc---cCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHhcCHHH
Confidence            9999999999986 889999   899999999842    3    888999999999 45578999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 022615          251 ATRTIRNEQYNA  262 (294)
Q Consensus       251 ~~~~~~~~l~~~  262 (294)
                      ++++|. .++++
T Consensus       489 v~~~w~-~ll~~  499 (500)
T TIGR02918       489 IIEKWK-KLVRE  499 (500)
T ss_pred             HHHHHH-HHHhh
Confidence            999998 67664

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=9e-33  Score=241.72  Aligned_cols=237  Identities=17%  Similarity=0.265  Sum_probs=192.3

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh----ccC------CcCceEEeeccccCCCCCCCccch----------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA----RVT------AANKIRIWKKGVDSESFHPRFRSS----------------   78 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~----~~~------~~~~i~~i~~gvd~~~~~~~~~~~----------------   78 (294)
                      .+.+..+..||.|+++|+..++.+.+.    ++.      ...++.+|+||+|.+.|.|.....                
T Consensus       212 n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~  291 (489)
T PRK14098        212 NMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN  291 (489)
T ss_pred             cHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence            467788899999999999999998752    222      257899999999999998754211                


Q ss_pred             --HHHHHhhcC-CCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCcc--HHHHHhhhcC--CCeEEEeccc
Q 022615           79 --EMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFTG--MPAVFTGMLL  149 (294)
Q Consensus        79 --~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~--~~~~~~~~~~--~~v~~~g~~~  149 (294)
                        ..+.+.+.. .++.++|+++|++.+.||++.+++++..+  ++++|+|+|.|+.  .+.++++.++  .+|.+.|.++
T Consensus       292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~  371 (489)
T PRK14098        292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFT  371 (489)
T ss_pred             HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecC
Confidence              112222222 23568999999999999999999999887  4799999999873  4566666653  3699999999


Q ss_pred             chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCccccccc-CCCCcceeecCCCCHHHHHHHHHHHh--
Q 022615          150 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE-DQDGKIGYLFNPGDLDDCLSKLEPLL--  226 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~-~~~~~~g~~~~~~d~~~l~~~i~~ll--  226 (294)
                      .+++..+|+.||++++||..|++|++.+|||+||+|+|+++.++..+.+.+ ..++.+|+++++.|+++++++|.+++  
T Consensus       372 ~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~  451 (489)
T PRK14098        372 DAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALAL  451 (489)
T ss_pred             HHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999888821 11367999999999999999999865  


Q ss_pred             -hChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 022615          227 -YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       227 -~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~  264 (294)
                       .+++.+.+++.++.  .++|||+..++++. .+|++++
T Consensus       452 ~~~~~~~~~~~~~~~--~~~fsw~~~a~~y~-~lY~~~~  487 (489)
T PRK14098        452 YHDEERWEELVLEAM--ERDFSWKNSAEEYA-QLYRELL  487 (489)
T ss_pred             HcCHHHHHHHHHHHh--cCCCChHHHHHHHH-HHHHHHh
Confidence             57777777766553  25799999999998 8999875

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.1e-33  Score=237.54  Aligned_cols=246  Identities=26%  Similarity=0.406  Sum_probs=201.4

Q ss_pred             cccccceeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHH
Q 022615            3 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRW   82 (294)
Q Consensus         3 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~   82 (294)
                      +|+..+...+..........++.+++.+++.+|.++++|+.+++.+.+.++.+..++.++|||+|...+.+.....   .
T Consensus       110 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~  186 (365)
T cd03809         110 IHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE---V  186 (365)
T ss_pred             eccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH---H
Confidence            3443433333333333345667889999999999999999999999998876678999999999988776543222   1


Q ss_pred             HhhcCCCCCceEEEeecccccccHHHHHHHHHhCC----CcEEEEEcCCccH-HHHH----hhhcCCCeEEEecccchhH
Q 022615           83 RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP----EARIAFIGDGPYR-EELE----KMFTGMPAVFTGMLLGEEL  153 (294)
Q Consensus        83 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~----~~~l~i~G~~~~~-~~~~----~~~~~~~v~~~g~~~~~~~  153 (294)
                      .......+.+.++++|++.+.||++.+++++..++    +++++++|.+... ....    +.....+|.+.|+++.+++
T Consensus       187 ~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~  266 (365)
T cd03809         187 LRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEEL  266 (365)
T ss_pred             HHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHH
Confidence            11223456789999999999999999999998773    4799999975432 2222    2233447999999999999


Q ss_pred             HHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHH
Q 022615          154 SQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       154 ~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~  233 (294)
                      .++|+.||++++|+..|++|++++|||++|+|||+++.++..+++     +..|+++.+.|.++++++|.++++|++.+.
T Consensus       267 ~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~-----~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~  341 (365)
T cd03809         267 AALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVA-----GDAALYFDPLDPEALAAAIERLLEDPALRE  341 (365)
T ss_pred             HHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCcccee-----cCceeeeCCCCHHHHHHHHHHHhcCHHHHH
Confidence            999999999999999999999999999999999999999999998     457888999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCHHHHHHHHH
Q 022615          234 TMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       234 ~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      ++++++++.+++|+|+..++++.
T Consensus       342 ~~~~~~~~~~~~~sw~~~~~~~~  364 (365)
T cd03809         342 ELRERGLARAKRFSWEKTARRTL  364 (365)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHh
Confidence            99999998888999999999876

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-32  Score=237.26  Aligned_cols=219  Identities=28%  Similarity=0.410  Sum_probs=191.7

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      ..+.+.+++.+|.++++|+..++.+.+.++...+++.++++|++...+.+..           ..++.+.++++|++.+.
T Consensus       174 ~~~~~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~-----------~~~~~~~il~~Grl~~~  242 (407)
T cd04946         174 IPLRRYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP-----------SKDDTLRIVSCSYLVPV  242 (407)
T ss_pred             hHHHHHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC-----------CCCCCEEEEEeeccccc
Confidence            3567778999999999999999999998887778999999999877554321           13456789999999999


Q ss_pred             ccHHHHHHHHHhC----C--CcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhc--CCEEEeecCCCC
Q 022615          104 KSLDFLKRVMDRL----P--EARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYAS--GDVFVMPSESET  171 (294)
Q Consensus       104 k~~~~l~~~~~~~----~--~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~--ad~~l~ps~~e~  171 (294)
                      ||++.+++++..+    |  ++.++++|.|+..+.++++++.    .+|.++|+++++++.++|+.  +|++++||..||
T Consensus       243 Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg  322 (407)
T cd04946         243 KRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEG  322 (407)
T ss_pred             cCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCcccc
Confidence            9999999999776    3  4667889999888888877652    35999999999999999976  789999999999


Q ss_pred             cchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCC-CHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHH
Q 022615          172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPG-DLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWR  249 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~  249 (294)
                      +|++++|||+||+|||+|+.++..|++   .++.+|+++++. |+++++++|.++++|++.+.+|++++++.+ ++|+|+
T Consensus       323 ~p~~llEAma~G~PVIas~vgg~~e~i---~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~  399 (407)
T cd04946         323 LPVSIMEAMSFGIPVIATNVGGTPEIV---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNAS  399 (407)
T ss_pred             ccHHHHHHHHcCCCEEeCCCCCcHHHh---cCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence            999999999999999999999999999   788899988764 899999999999999999999999999998 569999


Q ss_pred             HHHHHHH
Q 022615          250 AATRTIR  256 (294)
Q Consensus       250 ~~~~~~~  256 (294)
                      ...+++.
T Consensus       400 ~~~~~~~  406 (407)
T cd04946         400 KNYREFA  406 (407)
T ss_pred             HhHHHhc
Confidence            9998875

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.7e-32  Score=232.72  Aligned_cols=226  Identities=21%  Similarity=0.268  Sum_probs=185.9

Q ss_pred             cccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeec
Q 022615           20 VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        20 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      ...++..++..++.+|.++++|+.+++.+.+.++.+  . .+||||+|...+.+.   .......  ..++...++++|+
T Consensus       130 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~--~-~~i~ngv~~~~~~~~---~~~~~~~--~~~~~~~i~~~G~  201 (363)
T cd04955         130 KRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYGRD--S-TYIPYGADHVVSSEE---DEILKKY--GLEPGRYYLLVGR  201 (363)
T ss_pred             hHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcCCC--C-eeeCCCcChhhcchh---hhhHHhc--CCCCCcEEEEEec
Confidence            344566788889999999999999999997777653  2 899999998766541   1111111  2234456889999


Q ss_pred             ccccccHHHHHHHHHhCC-CcEEEEEcCCccHHHHHhhh-----cCCCeEEEecccchhHHHHHhcCCEEEeecCC-CCc
Q 022615          100 LGVEKSLDFLKRVMDRLP-EARIAFIGDGPYREELEKMF-----TGMPAVFTGMLLGEELSQAYASGDVFVMPSES-ETL  172 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~~-~~~l~i~G~~~~~~~~~~~~-----~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~  172 (294)
                      +.+.||++.++++++.++ +++|+++|.++....+.+.+     ...+|++.|+++++++.++++.||++++|+.. |++
T Consensus       202 ~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~  281 (363)
T cd04955         202 IVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGT  281 (363)
T ss_pred             ccccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCC
Confidence            999999999999999885 69999999875443333322     23479999999999999999999999999998 999


Q ss_pred             chHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-hCCHHHH
Q 022615          173 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAA  251 (294)
Q Consensus       173 ~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~s~~~~  251 (294)
                      |++++|||+||+|||+++.++..|++   .  .+|.++++.+.  ++++|..++++++.+.++++++++.+. +|||+.+
T Consensus       282 ~~~~~EAma~G~PvI~s~~~~~~e~~---~--~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~  354 (363)
T cd04955         282 NPSLLEAMAYGCPVLASDNPFNREVL---G--DKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYTWEKI  354 (363)
T ss_pred             ChHHHHHHHcCCCEEEecCCccceee---c--CCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence            99999999999999999999999998   3  37888887665  999999999999999999999999985 5999999


Q ss_pred             HHHHHHHHHH
Q 022615          252 TRTIRNEQYN  261 (294)
Q Consensus       252 ~~~~~~~l~~  261 (294)
                      +++++ .+|+
T Consensus       355 ~~~~~-~~y~  363 (363)
T cd04955         355 ADQYE-ELYK  363 (363)
T ss_pred             HHHHH-HHhC
Confidence            99998 6763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2e-32  Score=232.90  Aligned_cols=227  Identities=31%  Similarity=0.437  Sum_probs=195.4

Q ss_pred             ccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEee
Q 022615           19 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG   98 (294)
Q Consensus        19 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G   98 (294)
                      ..+....+++++++.+|.++++|+.+.+.+...+..+ .++.++|||+|...+.+......   .......+.++++|+|
T Consensus       123 ~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~-~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~~~~i~~~G  198 (357)
T cd03795         123 LLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFR-DKVRVIPLGLDPARYPRPDALEE---AIWRRAAGRPFFLFVG  198 (357)
T ss_pred             hhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCc-cceEEecCCCChhhcCCcchhhh---HhhcCCCCCcEEEEec
Confidence            3344567888899999999999999999888766543 78999999999887765432211   1122345678999999


Q ss_pred             cccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecC--CCCc
Q 022615           99 RLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSE--SETL  172 (294)
Q Consensus        99 ~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~  172 (294)
                      ++.+.||++.++++++.+++++++++|.|+....+++.++    ..+|.+.|+++++++..+|+.||++++||.  .|++
T Consensus       199 ~~~~~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~  278 (357)
T cd03795         199 RLVYYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAF  278 (357)
T ss_pred             ccccccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCccccccc
Confidence            9999999999999999998999999999988877777663    347999999999999999999999999986  5999


Q ss_pred             chHHHHHHhcCCCEEeecCCCcccccccCCC-CcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHH
Q 022615          173 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRA  250 (294)
Q Consensus       173 ~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~-~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~  250 (294)
                      |.+++|||+||+|||+++.++..+.+   .+ +.+|++++++|.++++++|.+++++++.++++++++++.+ ++|||+.
T Consensus       279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i---~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~  355 (357)
T cd03795         279 GIVLLEAMAFGKPVISTEIGTGGSYV---NLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADR  355 (357)
T ss_pred             chHHHHHHHcCCCEEecCCCCchhHH---hhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHh
Confidence            99999999999999999999999988   55 8899999999999999999999999999999999999998 5699997


Q ss_pred             HH
Q 022615          251 AT  252 (294)
Q Consensus       251 ~~  252 (294)
                      ++
T Consensus       356 ~~  357 (357)
T cd03795         356 MV  357 (357)
T ss_pred             hC
Confidence            63

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=4.7e-32  Score=233.71  Aligned_cols=223  Identities=23%  Similarity=0.283  Sum_probs=183.3

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      ..+++.+++++|.++++|+..++.+.+.++...+++.++|||+|.+.|.+......      ...++..+++|+|++.+.
T Consensus       163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~------~~~~~~~~ilf~G~l~~~  236 (397)
T TIGR03087       163 LAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN------PYPPGKRVLVFTGAMDYW  236 (397)
T ss_pred             HHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC------CCCCCCcEEEEEEecCCc
Confidence            45788999999999999999999998876655678999999999988865422110      012345789999999999


Q ss_pred             ccHHHHHH----HH----HhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecC-CCCcch
Q 022615          104 KSLDFLKR----VM----DRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGL  174 (294)
Q Consensus       104 k~~~~l~~----~~----~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~e~~~~  174 (294)
                      ||++.++.    ++    +..|+++|+|+|.|+. +.++++....+|.+.|++  +++..+|+.||++++|+. .||+|+
T Consensus       237 k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-~~~~~l~~~~~V~~~G~v--~~~~~~~~~adv~v~Ps~~~eG~~~  313 (397)
T TIGR03087       237 PNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-PAVRALAALPGVTVTGSV--ADVRPYLAHAAVAVAPLRIARGIQN  313 (397)
T ss_pred             cCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-HHHHHhccCCCeEEeeec--CCHHHHHHhCCEEEecccccCCccc
Confidence            99987763    32    2358999999999875 356666666789999999  479999999999999997 689999


Q ss_pred             HHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR  253 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~  253 (294)
                      +++|||+||+|||+|+.+.. .+.   ..+++|+++. +|+++++++|.++++|++.+++|++++++.+ ++|||+..++
T Consensus       314 ~~lEAma~G~PVV~t~~~~~-~i~---~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~  388 (397)
T TIGR03087       314 KVLEAMAMAKPVVASPEAAE-GID---ALPGAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLA  388 (397)
T ss_pred             HHHHHHHcCCCEEecCcccc-ccc---ccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            99999999999999987532 233   2355788886 7999999999999999999999999999998 5799999999


Q ss_pred             HHHHHHHH
Q 022615          254 TIRNEQYN  261 (294)
Q Consensus       254 ~~~~~l~~  261 (294)
                      ++. .+++
T Consensus       389 ~~~-~~l~  395 (397)
T TIGR03087       389 RLD-ALLE  395 (397)
T ss_pred             HHH-HHhc
Confidence            998 6664

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=1.9e-32  Score=240.94  Aligned_cols=232  Identities=24%  Similarity=0.325  Sum_probs=191.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-cc--------CCcCceEEeeccccCCCCCCCccc------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAANKIRIWKKGVDSESFHPRFRS------------------   77 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~--------~~~~~i~~i~~gvd~~~~~~~~~~------------------   77 (294)
                      .+.+..+..+|.|+++|+.+++.+... ++        .++.++.+|+||+|.+.|.|....                  
T Consensus       197 ~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k  276 (473)
T TIGR02095       197 NFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK  276 (473)
T ss_pred             HHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence            456788999999999999999888652 11        135689999999999988764321                  


Q ss_pred             hHHHHHhhcCC-CCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcCC--CeEEEecccc
Q 022615           78 SEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLG  150 (294)
Q Consensus        78 ~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~~--~v~~~g~~~~  150 (294)
                      ...+.+.+... ++.++|+++|++.+.||++.+++++..+  .+++|+|+|.|+  ..+.++++..+.  ++.+.+..+.
T Consensus       277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~  356 (473)
T TIGR02095       277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDE  356 (473)
T ss_pred             HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCH
Confidence            11222232222 3678999999999999999999999877  369999999984  445666665433  5778888888


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC------cceeecCCCCHHHHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG------KIGYLFNPGDLDDCLSKLEP  224 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~------~~g~~~~~~d~~~l~~~i~~  224 (294)
                      +++..+|+.||++++||..|++|++++|||+||+|+|+++.++..+.+   .++      .+|+++++.|+++++++|.+
T Consensus       357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v---~~~~~~~~~~~G~l~~~~d~~~la~~i~~  433 (473)
T TIGR02095       357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTV---VDGDPEAESGTGFLFEEYDPGALLAALSR  433 (473)
T ss_pred             HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceE---ecCCCCCCCCceEEeCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999   666      89999999999999999999


Q ss_pred             Hhh----ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 022615          225 LLY----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       225 ll~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~  262 (294)
                      ++.    +++.++++++++.+  ++|||+.+++++. .+|++
T Consensus       434 ~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~Y~~  472 (473)
T TIGR02095       434 ALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYV-ELYRS  472 (473)
T ss_pred             HHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHH-HHHHh
Confidence            887    88888888887753  5799999999999 89876

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=3.8e-32  Score=231.07  Aligned_cols=219  Identities=33%  Similarity=0.524  Sum_probs=194.3

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ..++..++.+|.++++|+.+++.+.+.++.+..++.++|||+|.+.+.+...         ....+.+.++|+|++.+.|
T Consensus       122 ~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~---------~~~~~~~~i~~~g~~~~~k  192 (355)
T cd03799         122 IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP---------PPPGEPLRILSVGRLVEKK  192 (355)
T ss_pred             HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc---------cccCCCeEEEEEeeecccc
Confidence            5788889999999999999999999986667789999999999887765420         1234567899999999999


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCC------C
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSES------E  170 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~------e  170 (294)
                      |++.++++++.+    ++++++++|.++..+.+.+.+..    .+|.+.|+++.+++..+|+.||++++|+..      |
T Consensus       193 ~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e  272 (355)
T cd03799         193 GLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDRE  272 (355)
T ss_pred             CHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCcc
Confidence            999999999876    47999999999887777766553    369999999999999999999999999998      9


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHH
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWR  249 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~  249 (294)
                      ++|++++|||++|+|||+++.++..+++   .++.+|++++++|.++++++|.+++++++.+.++++++++.+ ++|+|+
T Consensus       273 ~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~  349 (355)
T cd03799         273 GLPVVLMEAMAMGLPVISTDVSGIPELV---EDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIR  349 (355)
T ss_pred             CccHHHHHHHHcCCCEEecCCCCcchhh---hCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence            9999999999999999999999999999   778899999999999999999999999999999999999998 569999


Q ss_pred             HHHHHH
Q 022615          250 AATRTI  255 (294)
Q Consensus       250 ~~~~~~  255 (294)
                      ..++++
T Consensus       350 ~~~~~l  355 (355)
T cd03799         350 KQAARL  355 (355)
T ss_pred             HHhhcC
Confidence            988753

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=5.7e-32  Score=232.05  Aligned_cols=223  Identities=19%  Similarity=0.243  Sum_probs=183.3

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch-HHHHHhhc-CCCCCceEEEeecccccccHHHHH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-EMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLK  110 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~  110 (294)
                      .+| +++.|..+++.+.+.++.+++++.+||||+|...|.+..... ..+..... ..++.++++++|++.+.|+...++
T Consensus       339 ~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI  417 (578)
T PRK15490        339 GVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWI  417 (578)
T ss_pred             cch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHH
Confidence            344 677888888999888888999999999999998877643221 11221111 134557899999999999999999


Q ss_pred             HHHHh----CCCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          111 RVMDR----LPEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       111 ~~~~~----~~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      +++..    .|+++|+|+|+|+..+.+++++++    .+|.|.|+.  +++..+|+.+|++++||.+|++|++++|||+|
T Consensus       418 ~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~--~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~  495 (578)
T PRK15490        418 DFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGAS--RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV  495 (578)
T ss_pred             HHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCCh--hhHHHHHHhCCEEEEcccccCccHHHHHHHHh
Confidence            88754    478999999999988888877664    369999996  89999999999999999999999999999999


Q ss_pred             CCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHH---HHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHH
Q 022615          183 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL---EPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNE  258 (294)
Q Consensus       183 G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i---~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~  258 (294)
                      |+|||+++.++..|++   .++.+|+++++.|.+++++++   ..+....+....+++++++.+ ++|||+.+++++. .
T Consensus       496 GlPVVATdvGG~~EiV---~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~-k  571 (578)
T PRK15490        496 GVPVISTPAGGSAECF---IEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFV-K  571 (578)
T ss_pred             CCCEEEeCCCCcHHHc---ccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH-H
Confidence            9999999999999999   889999999999988887776   334445555567889999998 5699999999998 6


Q ss_pred             HHHH
Q 022615          259 QYNA  262 (294)
Q Consensus       259 l~~~  262 (294)
                      +|.+
T Consensus       572 i~~~  575 (578)
T PRK15490        572 TIAS  575 (578)
T ss_pred             HHHh
Confidence            7754

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=3.1e-32  Score=243.70  Aligned_cols=223  Identities=17%  Similarity=0.193  Sum_probs=184.3

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhc-CCCCCceEEEeecccccccHHHHHH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKR  111 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~  111 (294)
                      .++.++++|+..++.+.+.++.+.+++.+||||+|...+.+.......+..... ..++.++|+++|++.+.||++.+++
T Consensus       458 ~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~  537 (694)
T PRK15179        458 RGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE  537 (694)
T ss_pred             CCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence            345667778888888887777888899999999998877643222211111111 1334678999999999999999999


Q ss_pred             HHHh----CCCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC
Q 022615          112 VMDR----LPEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  183 (294)
Q Consensus       112 ~~~~----~~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G  183 (294)
                      ++..    .|+++|+|+|+|+..+.+++++++.    +|.|.|+.  +++..+|+.+|++++||..|++|++++|||+||
T Consensus       538 A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G  615 (694)
T PRK15179        538 AAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSG  615 (694)
T ss_pred             HHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcC
Confidence            9865    4789999999999888888877644    59999997  689999999999999999999999999999999


Q ss_pred             CCEEeecCCCcccccccCCCCcceeecCCCC--HHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 022615          184 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQY  260 (294)
Q Consensus       184 ~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~  260 (294)
                      +|||+|+.++..|++   .++.+|++++++|  .++++++|.+++.+......+++++++.+ ++|||+.+++++. .+|
T Consensus       616 ~PVVat~~gG~~EiV---~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~-~lY  691 (694)
T PRK15179        616 VPVVTTLAGGAGEAV---QEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTV-RCY  691 (694)
T ss_pred             CeEEEECCCChHHHc---cCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHH-HHh
Confidence            999999999999999   8899999998776  46889999888876655567788898888 5799999999998 788


Q ss_pred             H
Q 022615          261 N  261 (294)
Q Consensus       261 ~  261 (294)
                      +
T Consensus       692 ~  692 (694)
T PRK15179        692 Q  692 (694)
T ss_pred             C
Confidence            5

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=1.2e-31  Score=227.83  Aligned_cols=234  Identities=37%  Similarity=0.628  Sum_probs=201.6

Q ss_pred             cccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeec
Q 022615           20 VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        20 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      ........+..++.+|.+++.|+.+++.+.+.++.+.+++.++|||++...+.+..  .. .........+.+.++++|+
T Consensus       131 ~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~i~~~g~  207 (374)
T cd03801         131 LKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP--RA-ARRRLGIPEDEPVILFVGR  207 (374)
T ss_pred             HHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc--hH-HHhhcCCcCCCeEEEEecc
Confidence            34455788999999999999999999999998876557999999999988776542  11 1111223446678999999


Q ss_pred             ccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhh----cCCCeEEEecccchhHHHHHhcCCEEEeecCCCC
Q 022615          100 LGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMF----TGMPAVFTGMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~----~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      +...||++.+++++..+    ++++|+++|.+.....+.+.+    ...+|.+.|+++.+++.++|+.||++++|+..++
T Consensus       208 ~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~  287 (374)
T cd03801         208 LVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEG  287 (374)
T ss_pred             hhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhcc
Confidence            99999999999999776    469999999888777777654    3447999999999999999999999999999999


Q ss_pred             cchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHH
Q 022615          172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRA  250 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~  250 (294)
                      +|++++|||++|+|||+++.++..+++   .++.+|+++++.|+++++++|.+++.+++.+.++++++++.+ +.|+|+.
T Consensus       288 ~~~~~~Ea~~~g~pvI~~~~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (374)
T cd03801         288 FGLVLLEAMAAGLPVVASDVGGIPEVV---EDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDR  364 (374)
T ss_pred             ccchHHHHHHcCCcEEEeCCCChhHHh---cCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHH
Confidence            999999999999999999999999999   778999999999999999999999999999999999999666 6799999


Q ss_pred             HHHHHHHHHH
Q 022615          251 ATRTIRNEQY  260 (294)
Q Consensus       251 ~~~~~~~~l~  260 (294)
                      +++++. .+|
T Consensus       365 ~~~~~~-~~~  373 (374)
T cd03801         365 VAARTE-EVY  373 (374)
T ss_pred             HHHHHH-Hhh
Confidence            999998 555

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>PLN02316 synthase/transferase

Probab=100.00  E-value=2.2e-31  Score=243.36  Aligned_cols=235  Identities=21%  Similarity=0.277  Sum_probs=189.0

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCC--cCceEEeeccccCCCCCCCccc-------------------hHHHHHh
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTA--ANKIRIWKKGVDSESFHPRFRS-------------------SEMRWRL   84 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~--~~~i~~i~~gvd~~~~~~~~~~-------------------~~~~~~~   84 (294)
                      ..+..+..+|.|+++|+..++.+...+...  ..++.+|+||||.+.|.|....                   ...+.+.
T Consensus       754 ~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~l  833 (1036)
T PLN02316        754 HIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRL  833 (1036)
T ss_pred             HHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHh
Confidence            456778999999999999999998755433  4799999999999988764221                   1122333


Q ss_pred             hcCCCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCccH---HHHHhhhcC------CCeEEEecccchhH
Q 022615           85 SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYR---EELEKMFTG------MPAVFTGMLLGEEL  153 (294)
Q Consensus        85 ~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~~---~~~~~~~~~------~~v~~~g~~~~~~~  153 (294)
                      +...++.++|+++||+.+.||++.|++++..+  ++++|+|+|.|++.   ..++++...      .+|.+.+..+....
T Consensus       834 GL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la  913 (1036)
T PLN02316        834 GLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS  913 (1036)
T ss_pred             CCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence            33323678999999999999999999999876  57999999998653   455555552      25778777644444


Q ss_pred             HHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCC-------------CcceeecCCCCHHHHHH
Q 022615          154 SQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD-------------GKIGYLFNPGDLDDCLS  220 (294)
Q Consensus       154 ~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~-------------~~~g~~~~~~d~~~l~~  220 (294)
                      ..+|+.||++++||.+|+||++.+|||+||+|+|++++||+.+.+   .+             +.+|+++++.|+++++.
T Consensus       914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV---~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~  990 (1036)
T PLN02316        914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTV---FDVDHDKERAQAQGLEPNGFSFDGADAAGVDY  990 (1036)
T ss_pred             HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhc---cccccccccccccccCCceEEeCCCCHHHHHH
Confidence            589999999999999999999999999999999999999999999   44             36899999999999999


Q ss_pred             HHHHHhhC-hHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 022615          221 KLEPLLYN-QELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       221 ~i~~ll~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~~~  264 (294)
                      +|.+++.+ ++....++..+++.+ ++|||+..+.+++ .+|+.+.
T Consensus       991 AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~-~LY~~a~ 1035 (1036)
T PLN02316        991 ALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYM-ELYHSAR 1035 (1036)
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHh
Confidence            99999986 344566677777776 4699999999999 8998874

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.8e-32  Score=229.34  Aligned_cols=209  Identities=26%  Similarity=0.399  Sum_probs=180.9

Q ss_pred             cHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           22 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      .++.+++..++++|.++++|+.+++.+.+.++.   +..+++||+|.+.+.+..             .....++++|++.
T Consensus       142 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~---~~~vi~~~~d~~~~~~~~-------------~~~~~il~~G~~~  205 (351)
T cd03804         142 YLRIWDRRSAARVDYFIANSRFVARRIKKYYGR---DATVIYPPVDTDRFTPAE-------------EKEDYYLSVGRLV  205 (351)
T ss_pred             HHHHHHHHHhcCCCEEEECCHHHHHHHHHHhCC---CcEEECCCCCHhhcCcCC-------------CCCCEEEEEEcCc
Confidence            345567788899999999999999999887643   568999999988775532             2345699999999


Q ss_pred             ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          102 VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      +.||++.++++++.++ ++|+|+|.|+..+.+++ ....+|++.|+++++++.++|+.||++++|+. |++|++++|||+
T Consensus       206 ~~K~~~~li~a~~~~~-~~l~ivG~g~~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama  282 (351)
T cd03804         206 PYKRIDLAIEAFNKLG-KRLVVIGDGPELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMA  282 (351)
T ss_pred             cccChHHHHHHHHHCC-CcEEEEECChhHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHH
Confidence            9999999999999998 99999999988777776 34558999999999999999999999999999 999999999999


Q ss_pred             cCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 022615          182 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  255 (294)
Q Consensus       182 ~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  255 (294)
                      ||+|||+++.++..+++   .++.+|++++++|+++++++|..++++++   .+.+.+.+.+++|+|++..+++
T Consensus       283 ~G~Pvi~~~~~~~~e~i---~~~~~G~~~~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~  350 (351)
T cd03804         283 SGTPVIAYGKGGALETV---IDGVTGILFEEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI  350 (351)
T ss_pred             cCCCEEEeCCCCCccee---eCCCCEEEeCCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence            99999999999999999   78899999999999999999999999874   2344455556779999988775

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.2e-32  Score=232.77  Aligned_cols=229  Identities=19%  Similarity=0.273  Sum_probs=185.7

Q ss_pred             cccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHH----------------
Q 022615           20 VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR----------------   83 (294)
Q Consensus        20 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~----------------   83 (294)
                      .+..+++++++++.+|.|+++|+.+++.+.+ ++.+++++.+||||. ...|.+..........                
T Consensus       147 ~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (415)
T cd03816         147 VRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRELRIGA  224 (415)
T ss_pred             HHHHHHHHHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhcccccccccccccc
Confidence            3456788999999999999999999999987 567789999999995 4455544322111110                


Q ss_pred             hhcCCCCCceEEEeecccccccHHHHHHHHHhC----------CCcEEEEEcCCccHHHHHhhhcCC---CeEEE-eccc
Q 022615           84 LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----------PEARIAFIGDGPYREELEKMFTGM---PAVFT-GMLL  149 (294)
Q Consensus        84 ~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----------~~~~l~i~G~~~~~~~~~~~~~~~---~v~~~-g~~~  149 (294)
                      .....++..+++++|++.+.||++.+++|++.+          |+++|+|+|+|+..+.+++++++.   ++.+. |+++
T Consensus       225 ~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~  304 (415)
T cd03816         225 VQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLS  304 (415)
T ss_pred             ceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCC
Confidence            011233456788899999999999999999764          469999999999988888887754   45554 6899


Q ss_pred             chhHHHHHhcCCEEEeecC---CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHh
Q 022615          150 GEELSQAYASGDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  226 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll  226 (294)
                      .+++.++|+.||++++|+.   .+++|++++||||||+|||+++.++..|++   +++.+|++++  |+++++++|..++
T Consensus       305 ~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv---~~~~~G~lv~--d~~~la~~i~~ll  379 (415)
T cd03816         305 AEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELV---KHGENGLVFG--DSEELAEQLIDLL  379 (415)
T ss_pred             HHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHh---cCCCCEEEEC--CHHHHHHHHHHHH
Confidence            9999999999999987532   477999999999999999999999999999   8899999985  8999999999999


Q ss_pred             hC---hHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          227 YN---QELRETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       227 ~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +|   ++.+++|++++++.. +++|++...+++
T Consensus       380 ~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~~  411 (415)
T cd03816         380 SNFPNRGKLNSLKKGAQEES-ELRWDENWDRVV  411 (415)
T ss_pred             hcCCCHHHHHHHHHHHHHhh-hcCHHHHHHHHh
Confidence            98   899999999999887 567776655544

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5e-31  Score=224.15  Aligned_cols=235  Identities=30%  Similarity=0.416  Sum_probs=195.6

Q ss_pred             cccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEe
Q 022615           18 WLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV   97 (294)
Q Consensus        18 ~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   97 (294)
                      +.......+.+.+.+.+|.++++|....+.+.+. +.+.+++.++|||+|...+.+.........+.....++.+.++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  199 (365)
T cd03807         121 KSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIV  199 (365)
T ss_pred             hhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEe
Confidence            3344556778888899999999999999999886 456679999999999887765433322221222233567789999


Q ss_pred             ecccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhc-C----CCeEEEecccchhHHHHHhcCCEEEeecC
Q 022615           98 GRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFT-G----MPAVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus        98 G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~-~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      |++.+.||++.++++++.+    ++++|+++|.++.......... .    .++.+.|..  +++..+|+.||++++|+.
T Consensus       200 G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~  277 (365)
T cd03807         200 ARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSL  277 (365)
T ss_pred             cccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCc
Confidence            9999999999999998765    5799999999876665555544 2    358888865  889999999999999999


Q ss_pred             CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-hCC
Q 022615          169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYD  247 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~s  247 (294)
                      .|++|++++|||+||+|||+++.++..+++   .+  +|++++++|.++++++|..++++++.+.++++++++.++ +|+
T Consensus       278 ~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~---~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s  352 (365)
T cd03807         278 SEGFPNVLLEAMACGLPVVATDVGDNAELV---GD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFS  352 (365)
T ss_pred             cccCCcHHHHHHhcCCCEEEcCCCChHHHh---hc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999   44  899999999999999999999999999999999999984 699


Q ss_pred             HHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYN  261 (294)
Q Consensus       248 ~~~~~~~~~~~l~~  261 (294)
                      |+..++++. .+|+
T Consensus       353 ~~~~~~~~~-~~y~  365 (365)
T cd03807         353 IEAMVEAYE-ELYR  365 (365)
T ss_pred             HHHHHHHHH-HHhC
Confidence            999999998 6763

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6e-31  Score=224.16  Aligned_cols=231  Identities=37%  Similarity=0.625  Sum_probs=198.0

Q ss_pred             cHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           22 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      ..+.+++.+++++|.++++|+.+++.+.+.+ .+..++.++|||+|...+.+......   .......+.+.++++|++.
T Consensus       137 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~g~~~  212 (377)
T cd03798         137 LLRALLRRALRRADAVIAVSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA---RKLGLPEDKKVILFVGRLV  212 (377)
T ss_pred             hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH---HhccCCCCceEEEEeccCc
Confidence            3567889999999999999999999999875 56789999999999988766533221   1112344678899999999


Q ss_pred             ccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcc
Q 022615          102 VEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  173 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~  173 (294)
                      +.||++.++++++.+    ++++++++|.++..+.+.+..+    ..+|.+.|+++++++.++|+.||++++|+..+++|
T Consensus       213 ~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~  292 (377)
T cd03798         213 PRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFG  292 (377)
T ss_pred             cccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCC
Confidence            999999999999876    3799999999887777776654    34799999999999999999999999999999999


Q ss_pred             hHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHH
Q 022615          174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAAT  252 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~  252 (294)
                      ++++|||++|+|||+++.++..+++   .++..|+++++.|.++++++|.+++++++.  ++..++++.+ ++|+|+..+
T Consensus       293 ~~~~Ea~~~G~pvI~~~~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~  367 (377)
T cd03798         293 LVLLEAMACGLPVVATDVGGIPEII---TDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVA  367 (377)
T ss_pred             hHHHHHHhcCCCEEEecCCChHHHh---cCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHH
Confidence            9999999999999999999999999   778889999999999999999999998876  6666666666 679999999


Q ss_pred             HHHHHHHHHH
Q 022615          253 RTIRNEQYNA  262 (294)
Q Consensus       253 ~~~~~~l~~~  262 (294)
                      +++. .++++
T Consensus       368 ~~~~-~~~~~  376 (377)
T cd03798         368 ERLL-ELYRE  376 (377)
T ss_pred             HHHH-HHHhh
Confidence            9998 67664

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=100.00  E-value=2.7e-31  Score=227.40  Aligned_cols=210  Identities=26%  Similarity=0.389  Sum_probs=182.6

Q ss_pred             HHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHH
Q 022615           30 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  109 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l  109 (294)
                      .++++|.++++|+..++.+.+.++.. .++.++|+|++...+.+...          ...+...++++|++.+.|+++.+
T Consensus       154 ~~~~~d~ii~~s~~~~~~l~~~~~~~-~~v~~ip~g~~~~~~~~~~~----------~~~~~~~i~~vgrl~~~K~~~~l  222 (372)
T cd04949         154 NLDKVDGVIVATEQQKQDLQKQFGNY-NPIYTIPVGSIDPLKLPAQF----------KQRKPHKIITVARLAPEKQLDQL  222 (372)
T ss_pred             ChhhCCEEEEccHHHHHHHHHHhCCC-CceEEEcccccChhhcccch----------hhcCCCeEEEEEccCcccCHHHH
Confidence            35789999999999999999887643 45999999999877655320          12355689999999999999999


Q ss_pred             HHHHHhC----CCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          110 KRVMDRL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       110 ~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      ++++..+    |+++|+|+|.|+....+.......    +|.+.|+.  +++.++|+.||++++||..||+|++++|||+
T Consensus       223 i~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma  300 (372)
T cd04949         223 IKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEALS  300 (372)
T ss_pred             HHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHHh
Confidence            9998765    789999999998776666655432    58899954  8899999999999999999999999999999


Q ss_pred             cCCCEEeecCC-CcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 022615          182 SGIPVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  255 (294)
Q Consensus       182 ~G~pvI~~~~~-~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  255 (294)
                      ||+|||+++.+ +..+++   .++.+|+++++.|+++++++|..++.+++.++++++++++.+++|+|+.++++|
T Consensus       301 ~G~PvI~~~~~~g~~~~v---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w  372 (372)
T cd04949         301 HGLPVISYDVNYGPSEII---EDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW  372 (372)
T ss_pred             CCCCEEEecCCCCcHHHc---ccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence            99999999987 788999   889999999999999999999999999999999999999998899999998764

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.3e-32  Score=232.27  Aligned_cols=214  Identities=20%  Similarity=0.260  Sum_probs=175.1

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      +++++.++.+|.++++|+++++.+.+.++.. +++.+++||+|.+.+.+....         ...+..+|+|+|++.+.|
T Consensus       181 ~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~-~~~~vi~~gvd~~~~~~~~~~---------~~~~~~~il~vgr~~~~K  250 (419)
T cd03806         181 FLYGLAGSFADVVMVNSTWTRNHIRSLWKRN-TKPSIVYPPCDVEELLKLPLD---------EKTRENQILSIAQFRPEK  250 (419)
T ss_pred             HHHHHHhhcCCEEEECCHHHHHHHHHHhCcC-CCcEEEcCCCCHHHhcccccc---------cccCCcEEEEEEeecCCC
Confidence            5788999999999999999999999877543 589999999998766543210         123567899999999999


Q ss_pred             cHHHHHHHHHhC----C-----CcEEEEEcCCc------cHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEe
Q 022615          105 SLDFLKRVMDRL----P-----EARIAFIGDGP------YREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus       105 ~~~~l~~~~~~~----~-----~~~l~i~G~~~------~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      |++.+++++..+    +     +++|+|+|.+.      ..+.+++++++    .+|+|+|.++++++..+|+.||++++
T Consensus       251 ~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~v~  330 (419)
T cd03806         251 NHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIGLH  330 (419)
T ss_pred             CHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEEEE
Confidence            999999999765    3     48999999763      23455555543    36999999999999999999999999


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC-cccccccCC---CCcceeecCCCCHHHHHHHHHHHhhChH-HHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG-IPDIIPEDQ---DGKIGYLFNPGDLDDCLSKLEPLLYNQE-LRETMGQAAR  240 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~-~~e~~~~~~---~~~~g~~~~~~d~~~l~~~i~~ll~~~~-~~~~~~~~~~  240 (294)
                      |+..|+||.+++|||+||+|||+++.++ ..+++   .   ++.+|++++  |+++++++|.+++++++ .++.++++++
T Consensus       331 ~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv---~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~  405 (419)
T cd03806         331 TMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIV---VPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAAR  405 (419)
T ss_pred             CCccCCcccHHHHHHHcCCcEEEEcCCCCchhee---eccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999999999999999999865 45777   5   688999975  99999999999998655 4455555555


Q ss_pred             HHHHhCCHHHHHH
Q 022615          241 QEMEKYDWRAATR  253 (294)
Q Consensus       241 ~~~~~~s~~~~~~  253 (294)
                      +..++|||+.+.+
T Consensus       406 ~~~~~fs~~~f~~  418 (419)
T cd03806         406 SSVKRFSDEEFER  418 (419)
T ss_pred             HHHHhhCHHHhcc
Confidence            5557899998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=99.98  E-value=1.6e-30  Score=222.47  Aligned_cols=226  Identities=21%  Similarity=0.302  Sum_probs=176.9

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCC-CCCccc---hHHHHHhhcCCCCCceEEEeec
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRS---SEMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~-~~~~~~---~~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      +.+.+.+++++|.+++++..   ....  +.+..++ ++|||+|.... ......   ...+.+. ...++.++|+++|+
T Consensus       126 ~~~~~~~~~~~d~~i~~~~~---~~~~--~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~vgr  198 (372)
T cd03792         126 WDFLQPYIEDYDAAVFHLPE---YVPP--QVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKY-GIDPERPYITQVSR  198 (372)
T ss_pred             HHHHHHHHHhCCEEeecHHH---hcCC--CCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHh-CCCCCCcEEEEEec
Confidence            34567788899999998832   2222  2344455 99999997532 111111   1222222 23457789999999


Q ss_pred             ccccccHHHHHHHHHhC----CCcEEEEEcCCccH-----HHHHhhh----cCCCeEEEecc--cchhHHHHHhcCCEEE
Q 022615          100 LGVEKSLDFLKRVMDRL----PEARIAFIGDGPYR-----EELEKMF----TGMPAVFTGML--LGEELSQAYASGDVFV  164 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~-----~~~~~~~----~~~~v~~~g~~--~~~~~~~~~~~ad~~l  164 (294)
                      +.+.||++.+++++..+    ++++|+++|.|+..     +.++++.    ...++.+.|..  +.+++..+|+.||+++
T Consensus       199 l~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v  278 (372)
T cd03792         199 FDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVL  278 (372)
T ss_pred             cccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEE
Confidence            99999999999998754    67999999988531     1222222    12368888886  8899999999999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-  243 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-  243 (294)
                      +||..||+|++++|||+||+|||+++.++..+.+   .++.+|++++  +.++++++|.+++++++.+++|++++++.+ 
T Consensus       279 ~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i---~~~~~g~~~~--~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~  353 (372)
T cd03792         279 QKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQI---EDGETGFLVD--TVEEAAVRILYLLRDPELRRKMGANAREHVR  353 (372)
T ss_pred             eCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhc---ccCCceEEeC--CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999   7889999887  567888999999999999999999999987 


Q ss_pred             HhCCHHHHHHHHHHHHHHH
Q 022615          244 EKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       244 ~~~s~~~~~~~~~~~l~~~  262 (294)
                      ++|+|+.++++++ .+|+.
T Consensus       354 ~~~s~~~~~~~~~-~~~~~  371 (372)
T cd03792         354 ENFLITRHLKDYL-YLISK  371 (372)
T ss_pred             HHcCHHHHHHHHH-HHHHh
Confidence            5799999999999 67765

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=99.98  E-value=2.2e-30  Score=220.61  Aligned_cols=229  Identities=26%  Similarity=0.400  Sum_probs=188.4

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      .++.+.....++.++++|....+.+.+.+..+.+++.++|||+|...+.+...............++.++++++|++.+.
T Consensus       121 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  200 (360)
T cd04951         121 MLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEA  200 (360)
T ss_pred             HHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchh
Confidence            35556666778999999999999998887677789999999999887765433222222222224567889999999999


Q ss_pred             ccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          104 KSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       104 k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      ||++.+++++..+    ++++|+|+|.|+..+.+++.+..    .++.+.|+.  +++..+|+.||++++||..|++|++
T Consensus       201 kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~  278 (360)
T cd04951         201 KDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLV  278 (360)
T ss_pred             cCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccccCCChH
Confidence            9999999999766    47999999999988777776553    368999987  7899999999999999999999999


Q ss_pred             HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHH-HhCCHHHHHH
Q 022615          176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDWRAATR  253 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~-~~~s~~~~~~  253 (294)
                      ++|||++|+|||+++.++..+++   .+  +|+.+.++|.++++++|.++++ +++....++.+ +..+ ++|+|+.+++
T Consensus       279 ~~Ea~a~G~PvI~~~~~~~~e~i---~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~  352 (360)
T cd04951         279 VAEAMACELPVVATDAGGVREVV---GD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQ  352 (360)
T ss_pred             HHHHHHcCCCEEEecCCChhhEe---cC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHH
Confidence            99999999999999999999999   44  7888999999999999999995 55556666655 5555 6799999999


Q ss_pred             HHHHHHHH
Q 022615          254 TIRNEQYN  261 (294)
Q Consensus       254 ~~~~~l~~  261 (294)
                      ++. ++|+
T Consensus       353 ~~~-~~y~  359 (360)
T cd04951         353 QWL-TLYT  359 (360)
T ss_pred             HHH-HHhh
Confidence            999 7875

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.98  E-value=1e-30  Score=224.13  Aligned_cols=229  Identities=27%  Similarity=0.398  Sum_probs=196.2

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      +..+.+++..++.+|.++++|+.+++.+. ..+.+..++.++|||++...+.+...... + ......++...++++|++
T Consensus       153 ~~~~~~~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~G~~  229 (394)
T cd03794         153 RLLRKLERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES-L-RKELGLDDKFVVLYAGNI  229 (394)
T ss_pred             HHHHHHHHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh-h-hhccCCCCcEEEEEecCc
Confidence            45667889999999999999999999998 45566789999999999887765432221 1 111234567889999999


Q ss_pred             cccccHHHHHHHHHhCC---CcEEEEEcCCccHHHHHhhhc---CCCeEEEecccchhHHHHHhcCCEEEeecCCCCc--
Q 022615          101 GVEKSLDFLKRVMDRLP---EARIAFIGDGPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVMPSESETL--  172 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~~---~~~l~i~G~~~~~~~~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~--  172 (294)
                      ...||++.+++++..+.   +++++++|.|+..+.+.+.+.   ..++.+.|+++.+++.++|+.||++++|+..+++  
T Consensus       230 ~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~  309 (394)
T cd03794         230 GRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFE  309 (394)
T ss_pred             ccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccCccccc
Confidence            99999999999998773   799999999988777776432   3479999999999999999999999999987754  


Q ss_pred             ---chHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-hCCH
Q 022615          173 ---GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDW  248 (294)
Q Consensus       173 ---~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~s~  248 (294)
                         |++++|||+||+|||+++.++..+++   .++.+|+++++.|.++++++|.+++.|++.++++++++++.+. +|+|
T Consensus       310 ~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~  386 (394)
T cd03794         310 GVSPSKLFEYMAAGKPVLASVDGESAELV---EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFSR  386 (394)
T ss_pred             ccCchHHHHHHHCCCcEEEecCCCchhhh---ccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence               88899999999999999999999999   6778999999999999999999999999999999999999986 7999


Q ss_pred             HHHHHHH
Q 022615          249 RAATRTI  255 (294)
Q Consensus       249 ~~~~~~~  255 (294)
                      +.+++++
T Consensus       387 ~~~~~~~  393 (394)
T cd03794         387 EKLAERL  393 (394)
T ss_pred             HHHHHhc
Confidence            9999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>TIGR02470 sucr_synth sucrose synthase

Probab=99.98  E-value=5.6e-30  Score=229.16  Aligned_cols=236  Identities=22%  Similarity=0.344  Sum_probs=181.4

Q ss_pred             HHHHHHhCCeEEecchhhHH----HHHHh-----------c----cC--CcCceEEeeccccCCCCCCCccchHH-----
Q 022615           27 IKFLHRAADLTLVPSVAIGK----DLEAA-----------R----VT--AANKIRIWKKGVDSESFHPRFRSSEM-----   80 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~----~~~~~-----------~----~~--~~~~i~~i~~gvd~~~~~~~~~~~~~-----   80 (294)
                      +..+++.||.||+.|.....    .+.++           +    |+  +..|+.+||+|+|...|.|.......     
T Consensus       446 e~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~  525 (784)
T TIGR02470       446 DLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLH  525 (784)
T ss_pred             HHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhh
Confidence            55788899999999965422    22211           1    11  45689999999999988775432211     


Q ss_pred             -------------HHHhhc-CCCCCceEEEeecccccccHHHHHHHHHhC----CCcEEEEEcCCcc------------H
Q 022615           81 -------------RWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPY------------R  130 (294)
Q Consensus        81 -------------~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~------------~  130 (294)
                                   +...+. ..+++++|+++||+.+.||++.+++++.++    ++++|+|+|.+..            .
T Consensus       526 ~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i  605 (784)
T TIGR02470       526 PEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEI  605 (784)
T ss_pred             cchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHH
Confidence                         111221 245678999999999999999999999765    3588999997642            1


Q ss_pred             HHHHhhhcCC----CeEEEecc-cchhHHHHHh----cCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC
Q 022615          131 EELEKMFTGM----PAVFTGML-LGEELSQAYA----SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED  201 (294)
Q Consensus       131 ~~~~~~~~~~----~v~~~g~~-~~~~~~~~~~----~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~  201 (294)
                      +.+.+++.+.    +|.+.|+. +..+..++|+    .+|++++||.+|+||++++|||+||+|||+|+.||..|++   
T Consensus       606 ~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV---  682 (784)
T TIGR02470       606 EKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII---  682 (784)
T ss_pred             HHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHh---
Confidence            2334444433    59999975 5556666654    3579999999999999999999999999999999999999   


Q ss_pred             CCCcceeecCCCCHHHHHHHHHHHh----hChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHH
Q 022615          202 QDGKIGYLFNPGDLDDCLSKLEPLL----YNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       202 ~~~~~g~~~~~~d~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                      .++.+|+++++.|+++++++|..++    .|++.++++++++++.+ ++|||+.+++++++ +. .+...|
T Consensus       683 ~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~-l~-~~~~~~  751 (784)
T TIGR02470       683 QDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT-LA-GIYGFW  751 (784)
T ss_pred             cCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HH-hhhhHh
Confidence            8899999999999999999999876    68999999999999997 67999999999984 43 443444

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PLN02501 digalactosyldiacylglycerol synthase

Probab=99.97  E-value=1.2e-30  Score=226.53  Aligned_cols=233  Identities=18%  Similarity=0.150  Sum_probs=177.3

Q ss_pred             ccccccceeccccCCCcccccHHHHHHHHHHh--CCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchH
Q 022615            2 SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA--ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE   79 (294)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~   79 (294)
                      +|||+++.|+..+...++......+...++..  ||.|+++|..+.+ +.      . .+....||||.+.|.+......
T Consensus       465 syHTny~eYl~~y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~-L~------~-~vI~nVnGVDte~F~P~~r~~~  536 (794)
T PLN02501        465 VVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD-LP------K-SVICNVHGVNPKFLKIGEKVAE  536 (794)
T ss_pred             EEeCCcHHHHhHhcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH-hc------c-cceeecccccccccCCcchhHH
Confidence            69999999998887777666444233333333  8999999977773 31      1 2222237999999987644222


Q ss_pred             HHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCCC--eEEEecccchhH
Q 022615           80 MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEEL  153 (294)
Q Consensus        80 ~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~--v~~~g~~~~~~~  153 (294)
                       ..... .......++|+|++.+.||++.|++++..+    ++++|+|+|+|+..+.+++++.+.+  +.|+|..  ++.
T Consensus       537 -~r~lg-i~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~--dd~  612 (794)
T PLN02501        537 -ERELG-QQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGR--DHA  612 (794)
T ss_pred             -HHhcC-CccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCC--CCH
Confidence             22221 111224589999999999999999998754    6899999999999999988877554  7778776  667


Q ss_pred             HHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHH
Q 022615          154 SQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       154 ~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~  233 (294)
                      ..+|+.+|++++||..|++|++++||||||+|||+++.++. +++   .++.+|+..  +|.++++++|.+++.++....
T Consensus       613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V---~~g~nGll~--~D~EafAeAI~~LLsd~~~rl  686 (794)
T PLN02501        613 DDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFF---RSFPNCLTY--KTSEDFVAKVKEALANEPQPL  686 (794)
T ss_pred             HHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceE---eecCCeEec--CCHHHHHHHHHHHHhCchhhh
Confidence            78999999999999999999999999999999999999875 446   567777765  589999999999999876433


Q ss_pred             HHHHHHHHHHHhCCHHHHHHHHHH
Q 022615          234 TMGQAARQEMEKYDWRAATRTIRN  257 (294)
Q Consensus       234 ~~~~~~~~~~~~~s~~~~~~~~~~  257 (294)
                      .+..     ...+||+.+++++++
T Consensus       687 ~~~a-----~~~~SWeAaadrLle  705 (794)
T PLN02501        687 TPEQ-----RYNLSWEAATQRFME  705 (794)
T ss_pred             HHHH-----HhhCCHHHHHHHHHH
Confidence            2221     348999999999994

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=99.97  E-value=1.5e-30  Score=221.52  Aligned_cols=217  Identities=22%  Similarity=0.295  Sum_probs=180.9

Q ss_pred             HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc--ccccHHH
Q 022615           31 HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG--VEKSLDF  108 (294)
Q Consensus        31 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~--~~k~~~~  108 (294)
                      +..+|.++++|+.+++.+.+. +.+.+++.++|||+|.+.+.....          ...+.++++++|++.  +.||++.
T Consensus       131 ~~~~d~~i~~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~~----------~~~~~~~i~~~Grl~~~~~k~~~~  199 (359)
T PRK09922        131 ITCADYHLAISSGIKEQMMAR-GISAQRISVIYNPVEIKTIIIPPP----------ERDKPAVFLYVGRLKFEGQKNVKE  199 (359)
T ss_pred             hhcCCEEEEcCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHccCCCc----------ccCCCcEEEEEEEEecccCcCHHH
Confidence            478999999999999999875 566779999999999654322111          123467899999986  4599999


Q ss_pred             HHHHHHhC-CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccc--hhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          109 LKRVMDRL-PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLG--EELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       109 l~~~~~~~-~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~--~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      +++++..+ ++++|+++|+|++.+.++++++.    .+|.++|+++.  +++.++|+.+|++++||..||+|++++||||
T Consensus       200 l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma  279 (359)
T PRK09922        200 LFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMS  279 (359)
T ss_pred             HHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHH
Confidence            99999887 47999999999988888887764    36999999855  7899999999999999999999999999999


Q ss_pred             cCCCEEeec-CCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 022615          182 SGIPVVGVR-AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  260 (294)
Q Consensus       182 ~G~pvI~~~-~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~  260 (294)
                      ||+|||+++ .++..|++   .++.+|++++++|+++++++|.+++++++.+.  .....+.+++|+-+...+++. .+|
T Consensus       280 ~G~Pvv~s~~~~g~~eiv---~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~  353 (359)
T PRK09922        280 YGIPCISSDCMSGPRDII---KPGLNGELYTPGNIDEFVGKLNKVISGEVKYQ--HDAIPNSIERFYEVLYFKNLN-NAL  353 (359)
T ss_pred             cCCCEEEeCCCCChHHHc---cCCCceEEECCCCHHHHHHHHHHHHhCcccCC--HHHHHHHHHHhhHHHHHHHHH-HHH
Confidence            999999999 89999999   88999999999999999999999999987541  223334457788899999998 677


Q ss_pred             HHHH
Q 022615          261 NAAI  264 (294)
Q Consensus       261 ~~~~  264 (294)
                      +.+.
T Consensus       354 ~~~~  357 (359)
T PRK09922        354 FSKL  357 (359)
T ss_pred             HHHh
Confidence            7654

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=2e-30  Score=220.53  Aligned_cols=220  Identities=25%  Similarity=0.376  Sum_probs=182.3

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHH---HHHhhcCCCCCceEEEeecccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      +.+.+++++|.++++|+.+++.+.+.++.+.+++.++|||+|...+.+.......   ..+.....++.++++++|++.+
T Consensus       117 ~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~  196 (355)
T cd03819         117 RYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTR  196 (355)
T ss_pred             HHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeecccc
Confidence            5567788999999999999999997788888899999999999887654322111   1111123456778999999999


Q ss_pred             cccHHHHHHHHHhC----CCcEEEEEcCCccHHHH----Hhhhc----CCCeEEEecccchhHHHHHhcCCEEEeec-CC
Q 022615          103 EKSLDFLKRVMDRL----PEARIAFIGDGPYREEL----EKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPS-ES  169 (294)
Q Consensus       103 ~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~----~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps-~~  169 (294)
                      .||++.+++++..+    ++++++++|.++..+.+    .+.+.    ..+|.+.|+  .+++.++|+.||++++|| ..
T Consensus       197 ~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~  274 (355)
T cd03819         197 WKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEP  274 (355)
T ss_pred             ccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCC
Confidence            99999999999876    46999999987654333    22222    236999999  489999999999999999 79


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHh-hChHHHHHHHHHHHHHH-HhCC
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-YNQELRETMGQAARQEM-EKYD  247 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll-~~~~~~~~~~~~~~~~~-~~~s  247 (294)
                      |++|++++|||+||+|||+++.++..+++   .++.+|++++++|.++++++|..++ .+++.+.++++++++.+ ++|+
T Consensus       275 e~~~~~l~EA~a~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~  351 (355)
T cd03819         275 EAFGRTAVEAQAMGRPVIASDHGGARETV---RPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFS  351 (355)
T ss_pred             CCCchHHHHHHhcCCCEEEcCCCCcHHHH---hCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999   7788999999999999999997555 48899999999999998 4699


Q ss_pred             HHH
Q 022615          248 WRA  250 (294)
Q Consensus       248 ~~~  250 (294)
                      |+.
T Consensus       352 ~~~  354 (355)
T cd03819         352 YDR  354 (355)
T ss_pred             hcc
Confidence            975

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=4.3e-30  Score=219.04  Aligned_cols=226  Identities=25%  Similarity=0.356  Sum_probs=184.1

Q ss_pred             cHHHHHHHHHHhCCeEEecc-hhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           22 PMWLVIKFLHRAADLTLVPS-VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s-~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      ....+.+.+++.+|.++++| +..++.+...+   .+++.++|||++...+.+....     +......+.++++|+|++
T Consensus       123 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~G~~  194 (366)
T cd03822         123 GDRALLRLLLRRADAVIVMSSELLRALLLRAY---PEKIAVIPHGVPDPPAEPPESL-----KALGGLDGRPVLLTFGLL  194 (366)
T ss_pred             hhhHHHHHHHhcCCEEEEeeHHHHHHHHhhcC---CCcEEEeCCCCcCcccCCchhh-----HhhcCCCCCeEEEEEeec
Confidence            34567888999999999996 44444443321   3699999999998766543211     112234467889999999


Q ss_pred             cccccHHHHHHHHHhC----CCcEEEEEcCCccHHH---------HHhhhcCCCeEEEec-ccchhHHHHHhcCCEEEee
Q 022615          101 GVEKSLDFLKRVMDRL----PEARIAFIGDGPYREE---------LEKMFTGMPAVFTGM-LLGEELSQAYASGDVFVMP  166 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~---------~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~p  166 (294)
                      .+.||++.++++++.+    ++++|+++|.+.....         +.+.....+|.+.|. ++.+++..+|+.||++++|
T Consensus       195 ~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~p  274 (366)
T cd03822         195 RPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLP  274 (366)
T ss_pred             cCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEec
Confidence            9999999999998665    5899999998653322         223333447999987 9999999999999999999


Q ss_pred             cCCC--CcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH
Q 022615          167 SESE--TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME  244 (294)
Q Consensus       167 s~~e--~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~  244 (294)
                      +..|  ++|++++|||+||+|||+++.++ .+.+   .++.+|+++++.|.++++++|..++++++.+.++++++++.++
T Consensus       275 s~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i---~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~  350 (366)
T cd03822         275 YRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEV---LDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYAR  350 (366)
T ss_pred             ccccccccchHHHHHHHcCCCEEecCCCC-hhee---eeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence            9999  99999999999999999999999 6666   5788999999999999999999999999999999999999998


Q ss_pred             hCCHHHHHHHHHHHHH
Q 022615          245 KYDWRAATRTIRNEQY  260 (294)
Q Consensus       245 ~~s~~~~~~~~~~~l~  260 (294)
                      +|+|+.+++++. .+|
T Consensus       351 ~~s~~~~~~~~~-~~~  365 (366)
T cd03822         351 AMSWERVAERYL-RLL  365 (366)
T ss_pred             hCCHHHHHHHHH-HHh
Confidence            899999999998 565

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=4.4e-30  Score=217.71  Aligned_cols=222  Identities=28%  Similarity=0.417  Sum_probs=190.4

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCC-cCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeec
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~-~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      ..++.++++.++.+|.++++|+...+.+.+.+..+ ..++.++++|+|...+.+....         ..++.+.++++|+
T Consensus       126 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~G~  196 (359)
T cd03808         126 RLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP---------IPEDDPVFLFVAR  196 (359)
T ss_pred             HHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc---------cCCCCcEEEEEec
Confidence            44567789999999999999999999999877543 4577888999998776554221         1346789999999


Q ss_pred             ccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHh-----hhcCCCeEEEecccchhHHHHHhcCCEEEeecCCC
Q 022615          100 LGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEK-----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESE  170 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~-----~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e  170 (294)
                      +.+.||++.++++++.+    ++++|+++|.+........     .....+|.+.|+  .+++.++|+.||++++|+..|
T Consensus       197 ~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e  274 (359)
T cd03808         197 LLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPSYRE  274 (359)
T ss_pred             cccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecCccc
Confidence            99999999999999876    6799999998875544332     222346999998  489999999999999999999


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHH
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWR  249 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~  249 (294)
                      ++|++++|||+||+|||+++.++..+++   .++.+|++++++|+++++++|..++.+++.+.++++++++.+ ++|+|+
T Consensus       275 ~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i---~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~  351 (359)
T cd03808         275 GLPRVLLEAMAMGRPVIATDVPGCREAV---IDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEE  351 (359)
T ss_pred             CcchHHHHHHHcCCCEEEecCCCchhhh---hcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence            9999999999999999999999999999   778999999999999999999999999999999999999996 679999


Q ss_pred             HHHHHHH
Q 022615          250 AATRTIR  256 (294)
Q Consensus       250 ~~~~~~~  256 (294)
                      .+++++.
T Consensus       352 ~~~~~~~  358 (359)
T cd03808         352 IVVKKLL  358 (359)
T ss_pred             HHHHHhh
Confidence            9998875

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=3.4e-30  Score=227.40  Aligned_cols=231  Identities=23%  Similarity=0.329  Sum_probs=187.1

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh---------ccCCcCceEEeeccccCCCCCCCccch-----------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA---------RVTAANKIRIWKKGVDSESFHPRFRSS-----------------   78 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~---------~~~~~~~i~~i~~gvd~~~~~~~~~~~-----------------   78 (294)
                      .+++..+..+|.++++|+..++.+.+.         ......++.+|+||+|.+.+.+.....                 
T Consensus       202 ~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k  281 (476)
T cd03791         202 NFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENK  281 (476)
T ss_pred             cHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHH
Confidence            578889999999999999999888641         223457999999999999888754321                 


Q ss_pred             -HHHHHhhcC-CCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCcc--HHHHHhhhcC--CCeEEEecccc
Q 022615           79 -EMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFTG--MPAVFTGMLLG  150 (294)
Q Consensus        79 -~~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~--~~~~~~~~~~--~~v~~~g~~~~  150 (294)
                       ..+.+.+.. .++.++|+|+|++.+.||++.+++++..+  .+++|+++|.|..  .+.++++...  .++.+.+..+.
T Consensus       282 ~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~  361 (476)
T cd03791         282 AALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDE  361 (476)
T ss_pred             HHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCH
Confidence             112222221 35778999999999999999999999877  3589999998853  3455555543  46777766677


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCc------ceeecCCCCHHHHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGK------IGYLFNPGDLDDCLSKLEP  224 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~------~g~~~~~~d~~~l~~~i~~  224 (294)
                      +++..+|+.||++++||..|++|++.+|||+||+|||+++.++..|++   .++.      +|+++++.|+++++++|.+
T Consensus       362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v---~~~~~~~~~~~G~~~~~~~~~~l~~~i~~  438 (476)
T cd03791         362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTV---IDYNEDTGEGTGFVFEGYNADALLAALRR  438 (476)
T ss_pred             HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceE---eCCcCCCCCCCeEEeCCCCHHHHHHHHHH
Confidence            788899999999999999999999999999999999999999999999   6666      9999999999999999999


Q ss_pred             Hhh---ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022615          225 LLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       225 ll~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      +++   +++.+.++++++.+  ..|+|+.+++++. ++|+
T Consensus       439 ~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~y~  475 (476)
T cd03791         439 ALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL-ELYR  475 (476)
T ss_pred             HHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHHh
Confidence            875   56667777666544  4699999999999 6775

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=2e-30  Score=220.85  Aligned_cols=211  Identities=25%  Similarity=0.330  Sum_probs=174.8

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      +.+.+.+.+.+|.++++|+...+.+...  ....++.+||||+|...+.+.......+ +.....++.++|+|+|++.+.
T Consensus       128 ~~~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~~-~~~~~~~~~~~i~~vGr~~~~  204 (358)
T cd03812         128 KVLRKLINRLATDYLACSEEAGKWLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKKR-RELGILEDKFVIGHVGRFSEQ  204 (358)
T ss_pred             HHHHHHHHhcCCEEEEcCHHHHHHHHhC--CCcccEEEEeccCcHHHcCCCchhhhHH-HHcCCCCCCEEEEEEeccccc
Confidence            3567888899999999999999998775  3567999999999988776543322222 222234567899999999999


Q ss_pred             ccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          104 KSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       104 k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      ||++.+++++..+    ++++++|+|.|+..+.+.+.++.    .+|.+.|+  .+++.++|+.||++++||..|++|++
T Consensus       205 Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~  282 (358)
T cd03812         205 KNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLV  282 (358)
T ss_pred             cChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHH
Confidence            9999999999776    58999999999987777776643    36999998  58999999999999999999999999


Q ss_pred             HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 022615          176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  243 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  243 (294)
                      ++|||++|+|||+++.++..+.+   .+ ..+++..++++++++++|.+++++++..+++...+....
T Consensus       283 ~lEAma~G~PvI~s~~~~~~~~i---~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~  346 (358)
T cd03812         283 LIEAQASGLPCILSDTITKEVDL---TD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL  346 (358)
T ss_pred             HHHHHHhCCCEEEEcCCchhhhh---cc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence            99999999999999999999999   66 456666666789999999999999998887776665543

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.3e-29  Score=216.32  Aligned_cols=222  Identities=30%  Similarity=0.461  Sum_probs=185.6

Q ss_pred             HhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc--cccHHHH
Q 022615           32 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFL  109 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k~~~~l  109 (294)
                      ..++.++++|++.++.+.+.++.+..++.++|||+|.+.+.+... ...+.... ..++..++++.|+...  .||++.+
T Consensus       134 ~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~K~~~~l  211 (365)
T cd03825         134 DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDK-REARKRLG-LPADKKIILFGAVGGTDPRKGFDEL  211 (365)
T ss_pred             cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcH-HHHHHHhC-CCCCCeEEEEEecCCCccccCHHHH
Confidence            567899999999999998877667789999999999988765432 22222222 2344556666666654  8999999


Q ss_pred             HHHHHhC-----CCcEEEEEcCCccHHHHHhhhcCCCeEEEeccc-chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC
Q 022615          110 KRVMDRL-----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  183 (294)
Q Consensus       110 ~~~~~~~-----~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G  183 (294)
                      ++++..+     ++++++++|.++.....   ....++.++|+++ .+++..+|+.||++++||..|++|++++|||+||
T Consensus       212 l~a~~~l~~~~~~~~~~~i~G~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g  288 (365)
T cd03825         212 IEALKRLAERWKDDIELVVFGASDPEIPP---DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACG  288 (365)
T ss_pred             HHHHHHhhhccCCCeEEEEeCCCchhhhc---cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcC
Confidence            9999766     56899999987653321   2244799999998 6789999999999999999999999999999999


Q ss_pred             CCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 022615          184 IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       184 ~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~  262 (294)
                      +|||+++.++..+++   .++.+|++++..|.+++++++.+++++++.+.++++++++.+ ++|||+.+++++. .+|++
T Consensus       289 ~PvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~y~~  364 (365)
T cd03825         289 TPVVAFDVGGIPDIV---DHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKRYL-SLYEE  364 (365)
T ss_pred             CCEEEecCCCChhhe---eCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHhh
Confidence            999999999999999   778899999999999999999999999999999999999998 5699999999999 78875

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=8.2e-30  Score=217.44  Aligned_cols=223  Identities=29%  Similarity=0.435  Sum_probs=183.3

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ..++..++.++.+++.|..........+  +..++.++|||+|.+.+.+......  .......++.++++++|++.+.|
T Consensus       141 ~~~~~~~~~~~~i~~~s~~~~~~~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~G~~~~~K  216 (375)
T cd03821         141 LFERRLLQAAAAVHATSEQEAAEIRRLG--LKAPIAVIPNGVDIPPFAALPSRGR--RRKFPILPDKRIILFLGRLHPKK  216 (375)
T ss_pred             HHHHHHHhcCCEEEECCHHHHHHHHhhC--CcccEEEcCCCcChhccCcchhhhh--hhhccCCCCCcEEEEEeCcchhc
Confidence            4567788899999999988777776543  4568999999999988765432211  11122345678999999999999


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcCCcc--HHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGDGPY--REELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~~~~--~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      |++.+++++..+    ++++++++|.+..  ...++..+.    ..+|.+.|+++++++..+|+.||++++||..|++|+
T Consensus       217 ~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~  296 (375)
T cd03821         217 GLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGI  296 (375)
T ss_pred             CHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCc
Confidence            999999999776    5799999997642  233333212    346999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR  253 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~  253 (294)
                      +++|||+||+|||+++.++..+++   .+ ..|++.+. +.++++++|..++++++.++++++++++.+ ++|+|+.+++
T Consensus       297 ~~~Eama~G~PvI~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  371 (375)
T cd03821         297 VVAEALACGTPVVTTDKVPWQELI---EY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQ  371 (375)
T ss_pred             HHHHHHhcCCCEEEcCCCCHHHHh---hc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            999999999999999999999999   66 77887765 559999999999999999999999999996 6799999999


Q ss_pred             HHH
Q 022615          254 TIR  256 (294)
Q Consensus       254 ~~~  256 (294)
                      +++
T Consensus       372 ~~~  374 (375)
T cd03821         372 QLL  374 (375)
T ss_pred             Hhh
Confidence            875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=9.2e-30  Score=214.82  Aligned_cols=211  Identities=27%  Similarity=0.446  Sum_probs=180.5

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      .++.+++.+|.+++.|+.++...   ...+..++.++|||++...+.+.            ...+...++++|++.+.||
T Consensus       128 ~~~~~~~~~d~ii~~s~~~~~~~---~~~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~i~~~g~~~~~K~  192 (348)
T cd03820         128 LRRLLYRRADAVVVLTEEDRALY---YKKFNKNVVVIPNPLPFPPEEPS------------SDLKSKRILAVGRLVPQKG  192 (348)
T ss_pred             HHHHHHhcCCEEEEeCHHHHHHh---hccCCCCeEEecCCcChhhcccc------------CCCCCcEEEEEEeeccccC
Confidence            48889999999999999998222   22355789999999998765443            1345678999999999999


Q ss_pred             HHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHH
Q 022615          106 LDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL  177 (294)
Q Consensus       106 ~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~  177 (294)
                      ++.++++++.+    ++++|+|+|.++....+.++....    ++.+.|.  .+++..+|+.||++++|+..|++|++++
T Consensus       193 ~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~  270 (348)
T cd03820         193 FDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLL  270 (348)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHH
Confidence            99999999875    689999999998877776655433    5888888  5999999999999999999999999999


Q ss_pred             HHHhcCCCEEeecCCC-cccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          178 EAMSSGIPVVGVRAGG-IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       178 Ea~a~G~pvI~~~~~~-~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      |||+||+|||+++.++ ..+++   .++.+|+++++.|+++++++|.++++|++.++++++++++.+++|+|++++++|.
T Consensus       271 Ea~a~G~Pvi~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (348)
T cd03820         271 EAMAFGLPVISFDCPTGPSEII---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSIENIIKQWE  347 (348)
T ss_pred             HHHHcCCCEEEecCCCchHhhh---ccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence            9999999999998754 55666   5566999999999999999999999999999999999988888999999998875

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=99.97  E-value=8.9e-30  Score=217.61  Aligned_cols=235  Identities=14%  Similarity=0.143  Sum_probs=176.0

Q ss_pred             ccccccceeccccCCCccccc-HHHHHHHHHH-hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchH
Q 022615            2 SYHTHVPVYIPRYTFSWLVKP-MWLVIKFLHR-AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE   79 (294)
Q Consensus         2 ~~h~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~   79 (294)
                      +|||++++|.+.+...+.... .+.+.+++.+ .+|.++++|..+.+ +.+       .+.+.++|||...|.+..... 
T Consensus       147 tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~~~~-  217 (462)
T PLN02846        147 IVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGKLKL-  217 (462)
T ss_pred             EECCChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCcccH-
Confidence            699999998876553333332 2233444433 38999999986655 432       244456899999887654321 


Q ss_pred             HHHHhhcCCCC--CceEEEeecccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCCC--e-EEEecccc
Q 022615           80 MRWRLSNGEPD--KPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMP--A-VFTGMLLG  150 (294)
Q Consensus        80 ~~~~~~~~~~~--~~~i~~~G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~--v-~~~g~~~~  150 (294)
                       +...  ..++  .+.++|+||+.+.||++.+++++..+    ++++|+|+|+|++.+.+++++.+.+  + .+.|..  
T Consensus       218 -~~~~--~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~--  292 (462)
T PLN02846        218 -EQQK--NGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRD--  292 (462)
T ss_pred             -hhhc--CCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCC--
Confidence             1111  1223  24689999999999999999999754    6899999999999999999887654  2 355543  


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~  230 (294)
                       +..++|..+|++++||..|++|++++||||||+|||+++.++ .+++   .++.+|+.++  |.+++++++..++.++.
T Consensus       293 -~~~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v---~~~~ng~~~~--~~~~~a~ai~~~l~~~~  365 (462)
T PLN02846        293 -HADPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFF---KQFPNCRTYD--DGKGFVRATLKALAEEP  365 (462)
T ss_pred             -CHHHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-ccee---ecCCceEecC--CHHHHHHHHHHHHccCc
Confidence             344799999999999999999999999999999999999997 5888   7889998885  89999999999998543


Q ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 022615          231 LRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       231 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~  263 (294)
                        ..++..+   .++|||+..+++++ .+|+--
T Consensus       366 --~~~~~~a---~~~~SWe~~~~~l~-~~~~~~  392 (462)
T PLN02846        366 --APLTDAQ---RHELSWEAATERFL-RVADLD  392 (462)
T ss_pred             --hhHHHHH---HHhCCHHHHHHHHH-HHhccC
Confidence              2222222   24899999999999 777643

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.9e-29  Score=215.30  Aligned_cols=225  Identities=37%  Similarity=0.644  Sum_probs=189.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      .+++.+++.+|.++++|+.+++.+.+.+.  ..++.++|+|+|...+.+..... .+... ...++.++++++|++.+.|
T Consensus       140 ~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~i~~~G~~~~~k  215 (374)
T cd03817         140 KLSRRFYNRCDAVIAPSEKIADLLREYGV--KRPIEVIPTGIDLDRFEPVDGDD-ERRKL-GIPEDEPVLLYVGRLAKEK  215 (374)
T ss_pred             HHHHHHhhhCCEEEeccHHHHHHHHhcCC--CCceEEcCCccchhccCccchhH-HHHhc-CCCCCCeEEEEEeeeeccc
Confidence            57889999999999999999999987543  34699999999988776643221 12221 2245678899999999999


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      +++.+++++..+    ++++++++|.++..+.+++..+    ..++.+.|+++++++..+|+.||++++|+..|++|+++
T Consensus       216 ~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~  295 (374)
T cd03817         216 NIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVL  295 (374)
T ss_pred             CHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHH
Confidence            999999999766    5799999999988777777653    33699999999999999999999999999999999999


Q ss_pred             HHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +|||+||+|||+++.++..+++   .++.+|+++++.+. +++++|.+++++++.++++++++++.+++++   .++++.
T Consensus       296 ~Ea~~~g~PvI~~~~~~~~~~i---~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  368 (374)
T cd03817         296 LEAMAAGLPVVAVDAPGLPDLV---ADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNAEESAEKFS---FAKKVE  368 (374)
T ss_pred             HHHHHcCCcEEEeCCCChhhhe---ecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence            9999999999999999999999   78899999998777 9999999999999999999999999988766   444444


Q ss_pred             HHHHH
Q 022615          257 NEQYN  261 (294)
Q Consensus       257 ~~l~~  261 (294)
                       .+|+
T Consensus       369 -~~~~  372 (374)
T cd03817         369 -KLYE  372 (374)
T ss_pred             -HHHh
Confidence             4554

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PHA01633 putative glycosyl transferase group 1

Probab=99.97  E-value=4.1e-29  Score=205.88  Aligned_cols=224  Identities=19%  Similarity=0.240  Sum_probs=169.2

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCcc-chHHHHHhhcCCCCCceEEEeecccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      ....+++.+ .+.+|++|+.+++.+.+. |.+.. + ++++|+|.+.|.+... ....+.+.....++.+.++++|++.+
T Consensus        84 ~~y~~~m~~-~~~vIavS~~t~~~L~~~-G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~  159 (335)
T PHA01633         84 EIVNKYLLQ-DVKFIPNSKFSAENLQEV-GLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTK  159 (335)
T ss_pred             HHHHHHHhc-CCEEEeCCHHHHHHHHHh-CCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCcc
Confidence            344555554 669999999999999975 34332 3 5789999998876532 22333333323346778999999999


Q ss_pred             cccHHHHHHHHHhC----C----CcEEEEEcCCccHHHHHhhhcCCCeEEE---ecccchhHHHHHhcCCEEEeecCCCC
Q 022615          103 EKSLDFLKRVMDRL----P----EARIAFIGDGPYREELEKMFTGMPAVFT---GMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus       103 ~k~~~~l~~~~~~~----~----~~~l~i~G~~~~~~~~~~~~~~~~v~~~---g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      +||++.++++++.+    +    +++++++|.+    .+.++....+|.+.   |+++.+++.++|+.||++++||..|+
T Consensus       160 ~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~Eg  235 (335)
T PHA01633        160 RKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEG  235 (335)
T ss_pred             ccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCcccc
Confidence            99999999999876    3    3577777742    33333334478888   55678999999999999999999999


Q ss_pred             cchHHHHHHhcCCCEEeecCCCccccccc---------------CCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPE---------------DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~---------------~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      ||++++|||+||+|||+++.+++.|+...               +.....|+.++..|+++++++|..++...+ ....+
T Consensus       236 fGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~  314 (335)
T PHA01633        236 FGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERS  314 (335)
T ss_pred             CCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhh
Confidence            99999999999999999999998887521               012235778888899999999999865432 23346


Q ss_pred             HHHHHHHHhCCHHHHHHHHH
Q 022615          237 QAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       237 ~~~~~~~~~~s~~~~~~~~~  256 (294)
                      .++++.+++|+|+.+.++|+
T Consensus       315 ~~~~~~a~~f~~~~~~~~~~  334 (335)
T PHA01633        315 MKLKELAKKYDIRNLYTRFL  334 (335)
T ss_pred             HHHHHHHHhcCHHHHHHHhh
Confidence            77788889999999999886

>PRK10125 putative glycosyl transferase; Provisional

Probab=99.97  E-value=3e-29  Score=215.16  Aligned_cols=212  Identities=17%  Similarity=0.166  Sum_probs=164.2

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc--cccc
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL--GVEK  104 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~--~~~k  104 (294)
                      .+.+.+.++.+|++|+++++.+.+.++  ..++.+||||+|.+.+.+.......  +   ..+++.+++++|+.  .+.|
T Consensus       184 ~~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~~~~~--~---~~~~~~~il~v~~~~~~~~K  256 (405)
T PRK10125        184 FREMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAELPPV--R---ETQGKPKIAVVAHDLRYDGK  256 (405)
T ss_pred             HHHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccccccccc--c---cCCCCCEEEEEEeccccCCc
Confidence            444455678999999999999887654  3689999999996432221111000  0   12456789999984  4679


Q ss_pred             cHHHHHHHHHhC-CCcEEEEEcCCccHHHHHhhhcCCCeEEEeccc-chhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          105 SLDFLKRVMDRL-PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       105 ~~~~l~~~~~~~-~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      |++.+++++..+ ++++|+++|.++...       ..++.+.|+.. .+++.++|+.||++++||..|++|++++|||||
T Consensus       257 g~~~li~A~~~l~~~~~L~ivG~g~~~~-------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~  329 (405)
T PRK10125        257 TDQQLVREMMALGDKIELHTFGKFSPFT-------AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI  329 (405)
T ss_pred             cHHHHHHHHHhCCCCeEEEEEcCCCccc-------ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence            999999999987 578999999875321       23688888874 478999999999999999999999999999999


Q ss_pred             CCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHH----HHHHHHHHH-HhCCHHHHHHHHHH
Q 022615          183 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET----MGQAARQEM-EKYDWRAATRTIRN  257 (294)
Q Consensus       183 G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~----~~~~~~~~~-~~~s~~~~~~~~~~  257 (294)
                      |+|||+|+.++.+|++   .++ +|++++++|++++++.+     +++..++    +..++++.+ ++|||+.++++++ 
T Consensus       330 G~PVVat~~gG~~Eiv---~~~-~G~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~-  399 (405)
T PRK10125        330 GVPVIATHSDAAREVL---QKS-GGKTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYV-  399 (405)
T ss_pred             CCCEEEeCCCChHHhE---eCC-cEEEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHH-
Confidence            9999999999999999   554 89999999999999854     3333222    234466666 5699999999999 


Q ss_pred             HHHHH
Q 022615          258 EQYNA  262 (294)
Q Consensus       258 ~l~~~  262 (294)
                      .+|++
T Consensus       400 ~lY~~  404 (405)
T PRK10125        400 NFYQN  404 (405)
T ss_pred             HHHHh
Confidence            89875

>PLN00142 sucrose synthase

Probab=99.97  E-value=5.6e-29  Score=222.84  Aligned_cols=229  Identities=21%  Similarity=0.301  Sum_probs=178.5

Q ss_pred             HHHHHHHhCCeEEecchhhHH-------HHHHhc------------cC--CcCceEEeeccccCCCCCCCccchHH----
Q 022615           26 VIKFLHRAADLTLVPSVAIGK-------DLEAAR------------VT--AANKIRIWKKGVDSESFHPRFRSSEM----   80 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~-------~~~~~~------------~~--~~~~i~~i~~gvd~~~~~~~~~~~~~----   80 (294)
                      .+..+.+.||.||+.|.....       .+.++.            ++  ...++.+||+|+|...|.|.......    
T Consensus       468 aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l  547 (815)
T PLN00142        468 ADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSL  547 (815)
T ss_pred             HHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhh
Confidence            478889999999999976653       232321            11  14489999999999988764322110    


Q ss_pred             --------------HHHhhc-CCCCCceEEEeecccccccHHHHHHHHHhC----CCcEEEEEcCCc------cH-----
Q 022615           81 --------------RWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGP------YR-----  130 (294)
Q Consensus        81 --------------~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~------~~-----  130 (294)
                                    ....+. ..+++++|+++||+.+.||++.+++++..+    ++++|+|+|.+.      ..     
T Consensus       548 ~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~e  627 (815)
T PLN00142        548 HPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAE  627 (815)
T ss_pred             cccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHH
Confidence                          111221 234567899999999999999999999765    468999999762      11     


Q ss_pred             -HHHHhhhcCC----CeEEEeccc----chhHHHHHh-cCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCccccccc
Q 022615          131 -EELEKMFTGM----PAVFTGMLL----GEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE  200 (294)
Q Consensus       131 -~~~~~~~~~~----~v~~~g~~~----~~~~~~~~~-~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~  200 (294)
                       ..+.+++++.    +|.+.|...    .+++..+++ .+|++++||.+|+||++++|||+||+|||+|+.|+..|++  
T Consensus       628 l~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV--  705 (815)
T PLN00142        628 IKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII--  705 (815)
T ss_pred             HHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHh--
Confidence             2234444433    588887543    357777777 4799999999999999999999999999999999999999  


Q ss_pred             CCCCcceeecCCCCHHHHHHHHHHH----hhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Q 022615          201 DQDGKIGYLFNPGDLDDCLSKLEPL----LYNQELRETMGQAARQEM-EKYDWRAATRTIRN  257 (294)
Q Consensus       201 ~~~~~~g~~~~~~d~~~l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~  257 (294)
                       .++.+|+++++.|+++++++|..+    +.|++.++++++++++.+ ++|||+.+++++++
T Consensus       706 -~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~  766 (815)
T PLN00142        706 -VDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLT  766 (815)
T ss_pred             -cCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence             899999999999999999998765    468999999999999998 67999999999995

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=3.9e-29  Score=211.29  Aligned_cols=214  Identities=34%  Similarity=0.473  Sum_probs=181.8

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      .+++.+++.+|.++++|+.+++.+.+.++.+..++.++|||+|...+.+......    .....++.++++++|++.+.|
T Consensus       127 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~g~~~~~k  202 (353)
T cd03811         127 LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL----ELGIPPDGPVILAVGRLSPQK  202 (353)
T ss_pred             HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh----hcCCCCCceEEEEEecchhhc
Confidence            4788899999999999999999999988765689999999999887765433211    111245678899999999999


Q ss_pred             cHHHHHHHHHhCC----CcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          105 SLDFLKRVMDRLP----EARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       105 ~~~~l~~~~~~~~----~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      |++.++++++.++    +++|+++|.++....+.+.+...    ++.+.|+.  +++.++++.||++++||..|++|+++
T Consensus       203 ~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~  280 (353)
T cd03811         203 GFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVL  280 (353)
T ss_pred             ChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHH
Confidence            9999999998874    79999999988777766665533    58999986  78999999999999999999999999


Q ss_pred             HHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHH---HHHHHHHhhChHHHHHHHHHHHHHH-HhCC
Q 022615          177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC---LSKLEPLLYNQELRETMGQAARQEM-EKYD  247 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l---~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s  247 (294)
                      +|||++|+|||+++.++..+++   .++.+|+++++++.+++   .+++..+..+++.+.++++++.+.+ ++|+
T Consensus       281 ~Ea~~~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         281 LEAMALGTPVVATDCPGPREIL---EDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS  352 (353)
T ss_pred             HHHHHhCCCEEEcCCCChHHHh---cCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999   88999999999999998   7777788888888888888666665 5564

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=1.2e-28  Score=209.34  Aligned_cols=213  Identities=27%  Similarity=0.440  Sum_probs=182.0

Q ss_pred             HhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHHHH
Q 022615           32 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  111 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~  111 (294)
                      ...|.++++|+.+.+.+.+.+.. ..++.++|||+|...+.+...         ....+.++++++|++.+.||++.+++
T Consensus       142 ~~~d~ii~~s~~~~~~~~~~~~~-~~~~~vi~n~~~~~~~~~~~~---------~~~~~~~~i~~~G~~~~~k~~~~li~  211 (359)
T cd03823         142 KGGDAVIAPSRFLLDRYVANGLF-AEKISVIRNGIDLDRAKRPRR---------APPGGRLRFGFIGQLTPHKGVDLLLE  211 (359)
T ss_pred             cCCCEEEEeCHHHHHHHHHcCCC-ccceEEecCCcChhhcccccc---------CCCCCceEEEEEecCccccCHHHHHH
Confidence            34499999999999999887643 568999999999987765422         12346678999999999999999999


Q ss_pred             HHHhCC--CcEEEEEcCCccHHHHHhhh-cCCCeEEEecccchhHHHHHhcCCEEEeecC-CCCcchHHHHHHhcCCCEE
Q 022615          112 VMDRLP--EARIAFIGDGPYREELEKMF-TGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVV  187 (294)
Q Consensus       112 ~~~~~~--~~~l~i~G~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~e~~~~~~~Ea~a~G~pvI  187 (294)
                      +++.++  +++|+++|.+.......... ...++.+.|+++.+++.++|+.||++++|+. .|++|++++|||+||+|||
T Consensus       212 ~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi  291 (359)
T cd03823         212 AFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVI  291 (359)
T ss_pred             HHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEE
Confidence            998885  89999999887654443322 2347999999999999999999999999997 7999999999999999999


Q ss_pred             eecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022615          188 GVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       188 ~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      +++.++..+++   .++.+|++++++|.+++++++.+++++++.++++++++++....   +.+++++. ++|+
T Consensus       292 ~~~~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~  358 (359)
T cd03823         292 ASDIGGMAELV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEPPRSI---EDQAEEYL-KLYR  358 (359)
T ss_pred             ECCCCCHHHHh---cCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHHHhhhH---HHHHHHHH-HHhh
Confidence            99999999999   77889999999999999999999999999999999988776543   88888887 6765

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.96  E-value=9.7e-28  Score=202.49  Aligned_cols=203  Identities=19%  Similarity=0.336  Sum_probs=169.3

Q ss_pred             HHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHH
Q 022615           28 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  107 (294)
Q Consensus        28 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~  107 (294)
                      .......+.++++|+..++.+...     .++.++|||+|.+.+.+.             ..++..++|+|++.+.||++
T Consensus       126 ~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~vi~ngvd~~~~~~~-------------~~~~~~i~~~Gr~~~~Kg~~  187 (335)
T cd03802         126 YYAARPDVPFVSISDAQRRPWPPL-----PWVATVHNGIDLDDYPFR-------------GPKGDYLLFLGRISPEKGPH  187 (335)
T ss_pred             HHhhCcCCeEEEecHHHHhhcccc-----cccEEecCCcChhhCCCC-------------CCCCCEEEEEEeeccccCHH
Confidence            345567889999999988877543     589999999999887652             23456899999999999999


Q ss_pred             HHHHHHHhCCCcEEEEEcCCccHHHHHhhhc-----CCCeEEEecccchhHHHHHhcCCEEEeecC-CCCcchHHHHHHh
Q 022615          108 FLKRVMDRLPEARIAFIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMS  181 (294)
Q Consensus       108 ~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~-----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~e~~~~~~~Ea~a  181 (294)
                      .+++++++. +++++++|.++..........     ..+|.+.|+++++++..+|+.+|++++|+. .|++|.+++|||+
T Consensus       188 ~li~~~~~~-~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma  266 (335)
T cd03802         188 LAIRAARRA-GIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMA  266 (335)
T ss_pred             HHHHHHHhc-CCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHh
Confidence            999998764 799999999876554443322     357999999999999999999999999997 5999999999999


Q ss_pred             cCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 022615          182 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQY  260 (294)
Q Consensus       182 ~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~  260 (294)
                      ||+|||+++.++..|++   .++.+|+++++  +++++++|..+...+      .+++++.+ ++|+|+.+++++. .+|
T Consensus       267 ~G~PvI~~~~~~~~e~i---~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~~~~~~~~~~s~~~~~~~~~-~~y  334 (335)
T cd03802         267 CGTPVIAFRRGAVPEVV---EDGVTGFLVDS--VEELAAAVARADRLD------RAACRRRAERRFSAARMVDDYL-ALY  334 (335)
T ss_pred             cCCCEEEeCCCCchhhe---eCCCcEEEeCC--HHHHHHHHHHHhccH------HHHHHHHHHHhCCHHHHHHHHH-HHh
Confidence            99999999999999999   77889999985  999999999986543      23455555 6799999999999 677


Q ss_pred             H
Q 022615          261 N  261 (294)
Q Consensus       261 ~  261 (294)
                      +
T Consensus       335 ~  335 (335)
T cd03802         335 R  335 (335)
T ss_pred             C
Confidence            3

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.96  E-value=5.2e-28  Score=206.62  Aligned_cols=221  Identities=17%  Similarity=0.178  Sum_probs=167.2

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      ...++.+++++|.|+++|+.+.+.+.+.+    .++.++|||+|.+.|.+.........  .....++++++|+|++++.
T Consensus       144 ~~~e~~~~~~ad~vi~~S~~l~~~~~~~~----~~i~~i~ngvd~~~f~~~~~~~~~~~--~~~~~~~~~i~y~G~l~~~  217 (373)
T cd04950         144 LEAERRLLKRADLVFTTSPSLYEAKRRLN----PNVVLVPNGVDYEHFAAARDPPPPPA--DLAALPRPVIGYYGAIAEW  217 (373)
T ss_pred             HHHHHHHHHhCCEEEECCHHHHHHHhhCC----CCEEEcccccCHHHhhcccccCCChh--HHhcCCCCEEEEEeccccc
Confidence            37899999999999999999999887753    58999999999988865432211000  1123467899999999998


Q ss_pred             ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCC-----CCcchHHHH
Q 022615          104 KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES-----ETLGLVVLE  178 (294)
Q Consensus       104 k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~-----e~~~~~~~E  178 (294)
                      ++++.+.++++..|+++|+++|.++.......+....||+++|+++++++..+++.+|++++|+..     +++|++++|
T Consensus       218 ~d~~ll~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~E  297 (373)
T cd04950         218 LDLELLEALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFE  297 (373)
T ss_pred             cCHHHHHHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHH
Confidence            889988888888899999999987322233333335689999999999999999999999999753     467999999


Q ss_pred             HHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 022615          179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNE  258 (294)
Q Consensus       179 a~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  258 (294)
                      |||||+|||+++.++..+.      ...+ ++.++|.++++++|.+++.++.....  ....+.++++||+..++++...
T Consensus       298 ylA~G~PVVat~~~~~~~~------~~~~-~~~~~d~~~~~~ai~~~l~~~~~~~~--~~~~~~~~~~sW~~~a~~~~~~  368 (373)
T cd04950         298 YLAAGKPVVATPLPEVRRY------EDEV-VLIADDPEEFVAAIEKALLEDGPARE--RRRLRLAAQNSWDARAAEMLEA  368 (373)
T ss_pred             HhccCCCEEecCcHHHHhh------cCcE-EEeCCCHHHHHHHHHHHHhcCCchHH--HHHHHHHHHCCHHHHHHHHHHH
Confidence            9999999999986654333      2333 34456899999999997654322111  1222256789999999999844


Q ss_pred             H
Q 022615          259 Q  259 (294)
Q Consensus       259 l  259 (294)
                      +
T Consensus       369 l  369 (373)
T cd04950         369 L  369 (373)
T ss_pred             H
Confidence            3

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PLN02275 transferase, transferring glycosyl groups

Probab=99.96  E-value=3.3e-28  Score=207.59  Aligned_cols=193  Identities=21%  Similarity=0.269  Sum_probs=158.1

Q ss_pred             ccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEee
Q 022615           19 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG   98 (294)
Q Consensus        19 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G   98 (294)
                      ..+..+++++++++.+|.++++|+.+++.+.+.++.+   +.+||||. .+.|.+.....      ....+...+++++|
T Consensus       151 ~~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~~------~~~~~~~~~i~~~g  220 (371)
T PLN02275        151 LVRLYRWYERHYGKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLEI------RLRPNRPALVVSST  220 (371)
T ss_pred             HHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCchh------cccCCCcEEEEEeC
Confidence            3456678899999999999999999999998765553   88999985 35554432211      01123345788999


Q ss_pred             cccccccHHHHHHHHHhC---------------------CCcEEEEEcCCccHHHHHhhhcCC---CeEEEe-cccchhH
Q 022615           99 RLGVEKSLDFLKRVMDRL---------------------PEARIAFIGDGPYREELEKMFTGM---PAVFTG-MLLGEEL  153 (294)
Q Consensus        99 ~~~~~k~~~~l~~~~~~~---------------------~~~~l~i~G~~~~~~~~~~~~~~~---~v~~~g-~~~~~~~  153 (294)
                      ++.+.||++.+++++..+                     |+++|+|+|+|+..+.+++++++.   ++.+.+ +++.+++
T Consensus       221 rl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~  300 (371)
T PLN02275        221 SWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDY  300 (371)
T ss_pred             ceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHH
Confidence            999999999999988653                     679999999999999888887754   477765 6899999


Q ss_pred             HHHHhcCCEEEeecC---CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHh
Q 022615          154 SQAYASGDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  226 (294)
Q Consensus       154 ~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll  226 (294)
                      ..+|+.||++++|+.   .+++|++++||||||+|||+++.++..|++   +++.+|++++  ++++++++|.+++
T Consensus       301 ~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv---~~g~~G~lv~--~~~~la~~i~~l~  371 (371)
T PLN02275        301 PLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELV---KDGKNGLLFS--SSSELADQLLELL  371 (371)
T ss_pred             HHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHc---cCCCCeEEEC--CHHHHHHHHHHhC
Confidence            999999999998632   478999999999999999999999999999   8899999997  7999999998764

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=99.96  E-value=2.6e-28  Score=193.98  Aligned_cols=225  Identities=25%  Similarity=0.414  Sum_probs=179.9

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ++.+..+...|.+||+|...++...=+...+++++.+|||.++...|.|.....        ...+...++.++++-++|
T Consensus       137 ~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~--------~S~~i~~ivv~sRLvyrK  208 (426)
T KOG1111|consen  137 KLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK--------PSADIITIVVASRLVYRK  208 (426)
T ss_pred             ceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCcccc--------CCCCeeEEEEEeeeeecc
Confidence            455666788999999999888877666677889999999999999998853331        122347899999999999


Q ss_pred             cHHHHHHHHH----hCCCcEEEEEcCCccHHHH----HhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          105 SLDFLKRVMD----RLPEARIAFIGDGPYREEL----EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       105 ~~~~l~~~~~----~~~~~~l~i~G~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      |+|.+++++.    +.|+++|+|+|+|+.+..+    ++..-+.+|.++|.++++++.+.|.+-|++++||..|+|++.+
T Consensus       209 GiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~i  288 (426)
T KOG1111|consen  209 GIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVI  288 (426)
T ss_pred             chHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHH
Confidence            9999998774    4589999999999954444    4444455799999999999999999999999999999999999


Q ss_pred             HHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-hCCHHHHHHHH
Q 022615          177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTI  255 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~  255 (294)
                      +||++||+|||++..||.+|+++.     .-......+++++.+++++.+..-..   .-+...+..+ .|+|+.++++-
T Consensus       289 vEAaScGL~VVsTrVGGIpeVLP~-----d~i~~~~~~~~dl~~~v~~ai~~~~~---~p~~~h~~v~~~y~w~dVa~rT  360 (426)
T KOG1111|consen  289 VEAASCGLPVVSTRVGGIPEVLPE-----DMITLGEPGPDDLVGAVEKAITKLRT---LPLEFHDRVKKMYSWKDVAERT  360 (426)
T ss_pred             HHHHhCCCEEEEeecCCccccCCc-----cceeccCCChHHHHHHHHHHHHHhcc---CchhHHHHHHHhccHHHHHHHH
Confidence            999999999999999999999932     22334445788888888887753211   1223344554 49999999999


Q ss_pred             HHHHHHHHHHH
Q 022615          256 RNEQYNAAIWF  266 (294)
Q Consensus       256 ~~~l~~~~~~~  266 (294)
                      . .+|+++...
T Consensus       361 e-kvy~r~~~t  370 (426)
T KOG1111|consen  361 E-KVYDRAATT  370 (426)
T ss_pred             H-HHHHHHhhc
Confidence            8 899988643

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.94  E-value=2.7e-26  Score=199.90  Aligned_cols=228  Identities=21%  Similarity=0.256  Sum_probs=170.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhc----------------cCCcCceEEeeccccCCCCCCCccchHHH---HHhh
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAAR----------------VTAANKIRIWKKGVDSESFHPRFRSSEMR---WRLS   85 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~----------------~~~~~~i~~i~~gvd~~~~~~~~~~~~~~---~~~~   85 (294)
                      .+.+-++ .+|.|.+.+....+.+.+.-                .....++.++|+|+|.+.|.+........   .+..
T Consensus       180 ~ll~~~l-~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~  258 (460)
T cd03788         180 ELLRGLL-GADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELR  258 (460)
T ss_pred             HHHHHHh-cCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHH
Confidence            3444444 49999998866555544421                11234689999999998886543322211   1112


Q ss_pred             cCCCCCceEEEeecccccccHHHHHHHHHhC----CC----cEEEEEcCC-----ccHHHH----HhhhcC---------
Q 022615           86 NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE----ARIAFIGDG-----PYREEL----EKMFTG---------  139 (294)
Q Consensus        86 ~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~----~~l~i~G~~-----~~~~~~----~~~~~~---------  139 (294)
                      ...+++++|+++|++.+.||++.+++|++.+    |+    ++|+++|.+     +....+    ++++.+         
T Consensus       259 ~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~  338 (460)
T cd03788         259 ERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLD  338 (460)
T ss_pred             HhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            2345678899999999999999999998764    44    578888643     232223    332211         


Q ss_pred             -CCeE-EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCC----EEeecCCCcccccccCCCCcceeecCCC
Q 022615          140 -MPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPG  213 (294)
Q Consensus       140 -~~v~-~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~p----vI~~~~~~~~e~~~~~~~~~~g~~~~~~  213 (294)
                       .++. +.|.++.+++..+|+.||++++||..||+|++++|||+||+|    ||+|+.+|..+..      .+|+++++.
T Consensus       339 ~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~------~~g~lv~p~  412 (460)
T cd03788         339 WTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL------SGALLVNPY  412 (460)
T ss_pred             ceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhc------CCCEEECCC
Confidence             1244 457889999999999999999999999999999999999999    9999887776553      568999999


Q ss_pred             CHHHHHHHHHHHhhCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 022615          214 DLDDCLSKLEPLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQ  259 (294)
Q Consensus       214 d~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l  259 (294)
                      |+++++++|.++++++ ++++.+.+++++.+.+|+++..++++++.+
T Consensus       413 d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l  459 (460)
T cd03788         413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL  459 (460)
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence            9999999999999854 678888888899999999999999988654

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.94  E-value=3e-25  Score=191.88  Aligned_cols=223  Identities=21%  Similarity=0.247  Sum_probs=171.7

Q ss_pred             HHhCCeEEecchhhHHHHHHhcc---------------CCcCceEEeeccccCCCCCCCccchHH---HHHhhcCCCCCc
Q 022615           31 HRAADLTLVPSVAIGKDLEAARV---------------TAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKP   92 (294)
Q Consensus        31 ~~~ad~ii~~s~~~~~~~~~~~~---------------~~~~~i~~i~~gvd~~~~~~~~~~~~~---~~~~~~~~~~~~   92 (294)
                      +-.+|.|-+.+....+.+.+...               ....++.++|||+|.+.|.+.......   ........++++
T Consensus       181 ll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~  260 (456)
T TIGR02400       181 LLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRK  260 (456)
T ss_pred             HhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCe
Confidence            34799999999888887766221               134568899999999988654322111   111111124677


Q ss_pred             eEEEeecccccccHHHHHHHHHhC----CC----cEEEEEc-----CCccHHHHHhhhcCC--------------CeE-E
Q 022615           93 LIVHVGRLGVEKSLDFLKRVMDRL----PE----ARIAFIG-----DGPYREELEKMFTGM--------------PAV-F  144 (294)
Q Consensus        93 ~i~~~G~~~~~k~~~~l~~~~~~~----~~----~~l~i~G-----~~~~~~~~~~~~~~~--------------~v~-~  144 (294)
                      +|+++||+.+.||++.+++|++.+    |+    +.++++|     .++....+++.+++.              .+. +
T Consensus       261 vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l  340 (456)
T TIGR02400       261 LIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYL  340 (456)
T ss_pred             EEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEE
Confidence            899999999999999999999765    54    5577664     344444444433221              233 4


Q ss_pred             EecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCC----EEeecCCCcccccccCCCCcceeecCCCCHHHHHH
Q 022615          145 TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS  220 (294)
Q Consensus       145 ~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~p----vI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~  220 (294)
                      .+.++.+++..+|+.||++++||..||+|++++||||||+|    +|+|+.+|..+.+   .   +|+++++.|++++++
T Consensus       341 ~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l---~---~gllVnP~d~~~lA~  414 (456)
T TIGR02400       341 NRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL---N---GALLVNPYDIDGMAD  414 (456)
T ss_pred             cCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh---C---CcEEECCCCHHHHHH
Confidence            56788999999999999999999999999999999999999    9999998888888   3   689999999999999


Q ss_pred             HHHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 022615          221 KLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQ  259 (294)
Q Consensus       221 ~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l  259 (294)
                      +|.++++ +++++++..+..++.+.++|+...++++++.+
T Consensus       415 aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l  454 (456)
T TIGR02400       415 AIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence            9999998 56688888888899998899999999988654

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.94  E-value=1.8e-25  Score=170.71  Aligned_cols=153  Identities=38%  Similarity=0.734  Sum_probs=135.3

Q ss_pred             CCCCCceEEEeecccccccHHHHHHHHHhC-----CCcEEEEEcCCccHHHHHhhhcC----CCeEEEecccchhHHHHH
Q 022615           87 GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAY  157 (294)
Q Consensus        87 ~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~-----~~~~l~i~G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~  157 (294)
                      ...++++|+++|++.+.||++.+++++..+     +++.++|+|.+.....+......    .++.+.|.++.+++..+|
T Consensus        11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~   90 (172)
T PF00534_consen   11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELY   90 (172)
T ss_dssp             T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHH
T ss_pred             CCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccccccccc
Confidence            356788999999999999999999999764     68999999977766666665543    369999999989999999


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  237 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  237 (294)
                      +.||++++||..|++|.+++|||+||+|||+++.++..+++   .++.+|+++++.+.++++++|.+++++++.++.|++
T Consensus        91 ~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~  167 (172)
T PF00534_consen   91 KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEII---NDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGK  167 (172)
T ss_dssp             HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHS---GTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeccccccccccccccccccccccceeeccccCCceee---ccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999   788899999999999999999999999999999999


Q ss_pred             HHHHH
Q 022615          238 AARQE  242 (294)
Q Consensus       238 ~~~~~  242 (294)
                      +++++
T Consensus       168 ~~~~~  172 (172)
T PF00534_consen  168 NARER  172 (172)
T ss_dssp             HHHHH
T ss_pred             HhcCC
Confidence            99874

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.93  E-value=4.7e-24  Score=183.63  Aligned_cols=237  Identities=18%  Similarity=0.217  Sum_probs=163.8

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch-----------HH-HH--Hhh-cCCC
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-----------EM-RW--RLS-NGEP   89 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~-----------~~-~~--~~~-~~~~   89 (294)
                      .+|+.+...||.++++|+.++..+...++.++++  |+|||+|...|.+.....           +. +.  ... ...+
T Consensus       218 ~iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~  295 (590)
T cd03793         218 CIERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDL  295 (590)
T ss_pred             HHHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCC
Confidence            4899999999999999999999999999988776  999999999987653211           11 00  111 1223


Q ss_pred             CCceEEE-eecccc-cccHHHHHHHHHhCC--------C---cEEEEEcCCcc----------------HHHHHh-----
Q 022615           90 DKPLIVH-VGRLGV-EKSLDFLKRVMDRLP--------E---ARIAFIGDGPY----------------REELEK-----  135 (294)
Q Consensus        90 ~~~~i~~-~G~~~~-~k~~~~l~~~~~~~~--------~---~~l~i~G~~~~----------------~~~~~~-----  135 (294)
                      ++.+++| +||+.. .||++.+++|+.++.        +   +-|+++-.+..                ++.+.+     
T Consensus       296 d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i  375 (590)
T cd03793         296 DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKI  375 (590)
T ss_pred             CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHh
Confidence            5556666 799988 999999999997761        2   23444321100                000000     


Q ss_pred             ------------------h----------------------------------------h------cC--C--CeEEEec
Q 022615          136 ------------------M----------------------------------------F------TG--M--PAVFTGM  147 (294)
Q Consensus       136 ------------------~----------------------------------------~------~~--~--~v~~~g~  147 (294)
                                        +                                        +      +.  .  .|+|++.
T Consensus       376 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~  455 (590)
T cd03793         376 GKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPE  455 (590)
T ss_pred             hhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccc
Confidence                              0                                        0      00  0  1333332


Q ss_pred             -cc------chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC-CCC-cceeecC-------
Q 022615          148 -LL------GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED-QDG-KIGYLFN-------  211 (294)
Q Consensus       148 -~~------~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~-~~~-~~g~~~~-------  211 (294)
                       ++      ..+..++++.||++++||.+|+||.+++|||+||+|||+|+.+++.+++.+. .++ ..|+.+.       
T Consensus       456 ~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~  535 (590)
T cd03793         456 FLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSP  535 (590)
T ss_pred             ccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccch
Confidence             21      2358899999999999999999999999999999999999999985544211 223 3466665       


Q ss_pred             CCCHHHHHHHHHHHhhChHHHHHHHHHHH--HHHHhCCHHHHHHHHHHHHHHHHHH
Q 022615          212 PGDLDDCLSKLEPLLYNQELRETMGQAAR--QEMEKYDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       212 ~~d~~~l~~~i~~ll~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~l~~~~~~  265 (294)
                      +.+.++++++|.++++. +.++.+.+.+.  +..++|+|++.+..+. +.|+.++.
T Consensus       536 ~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~-~A~~~Al~  589 (590)
T cd03793         536 DESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYR-KARQLALS  589 (590)
T ss_pred             HHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhh
Confidence            34577888888888744 45555655554  6667899999999998 78877653

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.91  E-value=3.1e-24  Score=196.46  Aligned_cols=226  Identities=20%  Similarity=0.225  Sum_probs=169.2

Q ss_pred             hCCeEEecchhhHHHHHHhc---------------cCCcCceEEeeccccCCCCCCCccchH---HHHHhhcCCCCCceE
Q 022615           33 AADLTLVPSVAIGKDLEAAR---------------VTAANKIRIWKKGVDSESFHPRFRSSE---MRWRLSNGEPDKPLI   94 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~---------------~~~~~~i~~i~~gvd~~~~~~~~~~~~---~~~~~~~~~~~~~~i   94 (294)
                      .+|.|-+.+....+.+.+.-               .....++.++|+|||.+.|.+......   ..........++++|
T Consensus       203 ~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lI  282 (797)
T PLN03063        203 TADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVI  282 (797)
T ss_pred             cCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEE
Confidence            67777777777776665510               112246889999999988765332211   111111122366789


Q ss_pred             EEeecccccccHHHHHHHHHhC----CCc----EEEEEc-----CCccHHHHHhhhcCC--------------CeE-EEe
Q 022615           95 VHVGRLGVEKSLDFLKRVMDRL----PEA----RIAFIG-----DGPYREELEKMFTGM--------------PAV-FTG  146 (294)
Q Consensus        95 ~~~G~~~~~k~~~~l~~~~~~~----~~~----~l~i~G-----~~~~~~~~~~~~~~~--------------~v~-~~g  146 (294)
                      +++|++.+.||+..+++|++.+    |++    .|+.++     .++..+.+++.+.+.              .|. +.+
T Consensus       283 l~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~  362 (797)
T PLN03063        283 LGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDC  362 (797)
T ss_pred             EEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecC
Confidence            9999999999999999998765    554    344332     333444443333211              133 334


Q ss_pred             cccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCC----EEeecCCCcccccccCCCCcceeecCCCCHHHHHHHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  222 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~p----vI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i  222 (294)
                      .++.+++..+|+.||++++||..||+|++++||||||+|    +|+|+.+|..+.+     +..|++++|.|+++++++|
T Consensus       363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-----~~~allVnP~D~~~lA~AI  437 (797)
T PLN03063        363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-----GAGALLVNPWNITEVSSAI  437 (797)
T ss_pred             CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-----cCCeEEECCCCHHHHHHHH
Confidence            788899999999999999999999999999999999999    9999999888877     5679999999999999999


Q ss_pred             HHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 022615          223 EPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       223 ~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~  264 (294)
                      .+++. +++++++..+..++.+.+++|...++.+++ -++++.
T Consensus       438 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~-~l~~~~  479 (797)
T PLN03063        438 KEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMS-ELNDII  479 (797)
T ss_pred             HHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHH-HHHHHh
Confidence            99998 777888888889999999999999999994 445544

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.91  E-value=3.3e-23  Score=177.56  Aligned_cols=218  Identities=14%  Similarity=0.189  Sum_probs=167.7

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      ...|+.+.+|.++++|+.+++.+.+. +.+++++.+++++++.....+.......+.+.+ ..++.++|+++|+....++
T Consensus       143 ~~~w~~~~~d~~~~~s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~g-l~~~~~~il~~Gg~~g~~~  220 (382)
T PLN02605        143 HPTWFHKGVTRCFCPSEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVRPKDELRRELG-MDEDLPAVLLMGGGEGMGP  220 (382)
T ss_pred             CcccccCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCCCHHHHHHHcC-CCCCCcEEEEECCCccccc
Confidence            34677889999999999999999876 577889999999998765543333333444433 3456788999999888899


Q ss_pred             HHHHHHHHHhC--------CCcE-EEEEcCCc-cHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          106 LDFLKRVMDRL--------PEAR-IAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       106 ~~~l~~~~~~~--------~~~~-l~i~G~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      +..+++++...        ++.+ ++++|.+. ..+.+++.....+|.+.|++  +++.++|+.||+++.++    .|++
T Consensus       221 ~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~----g~~t  294 (382)
T PLN02605        221 LEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFV--TNMEEWMGACDCIITKA----GPGT  294 (382)
T ss_pred             HHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEecc--ccHHHHHHhCCEEEECC----Ccch
Confidence            99988888642        4565 66778764 34555554334579999999  68999999999999865    3789


Q ss_pred             HHHHHhcCCCEEeecC------CCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhC-hHHHHHHHHHHHHHHHhCCH
Q 022615          176 VLEAMSSGIPVVGVRA------GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEMEKYDW  248 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~------~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~s~  248 (294)
                      ++|||+||+|+|+++.      ++. +++   .+.+.|+..  .|+++++++|.+++.+ ++.+++|++++++.....+.
T Consensus       295 i~EAma~g~PvI~~~~~pgqe~gn~-~~i---~~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~  368 (382)
T PLN02605        295 IAEALIRGLPIILNGYIPGQEEGNV-PYV---VDNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAV  368 (382)
T ss_pred             HHHHHHcCCCEEEecCCCccchhhH-HHH---HhCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchH
Confidence            9999999999999984      333 334   345556554  6999999999999988 88899999999998888888


Q ss_pred             HHHHHHHHH
Q 022615          249 RAATRTIRN  257 (294)
Q Consensus       249 ~~~~~~~~~  257 (294)
                      +.+++.+.+
T Consensus       369 ~~i~~~l~~  377 (382)
T PLN02605        369 FDIVHDLHE  377 (382)
T ss_pred             HHHHHHHHH
Confidence            888877763

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.91  E-value=3.6e-23  Score=180.02  Aligned_cols=226  Identities=17%  Similarity=0.208  Sum_probs=163.1

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCcc-chHHHHHhhcCCCCCceEEEeeccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      +..+.+++++.+|.|++.|+..++.+.+.+ .+++ +.+++|+ +.+...+... ......+.... +++.+++++|+. 
T Consensus       168 ~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g-~~~~-i~vi~n~-~~d~~~~~~~~~~~~~~r~~~~-~~~~vil~~~~~-  242 (425)
T PRK05749        168 FKRFYRLLFKNIDLVLAQSEEDAERFLALG-AKNE-VTVTGNL-KFDIEVPPELAARAATLRRQLA-PNRPVWIAASTH-  242 (425)
T ss_pred             HHHHHHHHHHhCCEEEECCHHHHHHHHHcC-CCCC-cEecccc-cccCCCChhhHHHHHHHHHHhc-CCCcEEEEeCCC-
Confidence            456888999999999999999999998854 5555 8888884 3322222111 11111111112 456677887754 


Q ss_pred             ccccHHHHHHHHHhC----CCcEEEEEcCCccH-HHHHhhhcCCCe-----------------EEEecccchhHHHHHhc
Q 022615          102 VEKSLDFLKRVMDRL----PEARIAFIGDGPYR-EELEKMFTGMPA-----------------VFTGMLLGEELSQAYAS  159 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~-~~~~~~~~~~~v-----------------~~~g~~~~~~~~~~~~~  159 (294)
                       .++.+.++++++.+    |+++|+|+|.|+.+ +.+++.+++.++                 .+.+.  .+++..+|+.
T Consensus       243 -~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~--~~el~~~y~~  319 (425)
T PRK05749        243 -EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDT--MGELGLLYAI  319 (425)
T ss_pred             -chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEec--HHHHHHHHHh
Confidence             57788889988654    78999999999876 677777665432                 22222  2689999999


Q ss_pred             CCEEEe-ecCCCCcchHHHHHHhcCCCEEeecC-CCcccccccCCC-CcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          160 GDVFVM-PSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       160 ad~~l~-ps~~e~~~~~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~-~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      ||++++ +|..|++|.+++|||+||+|||+++. ++..+..   +. ..+|.++.+.|+++++++|..+++|++.+++|+
T Consensus       320 aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~---~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~  396 (425)
T PRK05749        320 ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIF---ERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYG  396 (425)
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHH---HHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHH
Confidence            999655 67779999999999999999999764 4455554   22 245777888899999999999999999999999


Q ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHH
Q 022615          237 QAARQEMEKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       237 ~~~~~~~~~~s~~~~~~~~~~~l~~~  262 (294)
                      +++++.+++.  ...+++++ .+++.
T Consensus       397 ~~a~~~~~~~--~~~~~~~~-~~l~~  419 (425)
T PRK05749        397 EAGVAFLKQN--QGALQRTL-QLLEP  419 (425)
T ss_pred             HHHHHHHHhC--ccHHHHHH-HHHHH
Confidence            9999998654  24555555 34443

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.90  E-value=2.8e-22  Score=168.49  Aligned_cols=200  Identities=15%  Similarity=0.112  Sum_probs=152.6

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      +.+++++++++|.++++|+.+++.+.+. +.+..++.+++++.+.....+.  .         ..+..+.++|+|+++..
T Consensus       114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~~-g~~~~~i~~~~~~~~~~~~~~~--~---------~~~~~~~i~yaG~l~k~  181 (333)
T PRK09814        114 MKEEIDMLNLADVLIVHSKKMKDRLVEE-GLTTDKIIVQGIFDYLNDIELV--K---------TPSFQKKINFAGNLEKS  181 (333)
T ss_pred             hHHHHHHHHhCCEEEECCHHHHHHHHHc-CCCcCceEeccccccccccccc--c---------cccCCceEEEecChhhc
Confidence            5778999999999999999999999875 4555678777765543211110  0         12245689999999844


Q ss_pred             ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecC-----------CCCc
Q 022615          104 KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-----------SETL  172 (294)
Q Consensus       104 k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-----------~e~~  172 (294)
                      ..+   .+   ..++++|+++|.|+...     ....+|++.|+++.+++..+|+. |+++.+..           .-.+
T Consensus       182 ~~l---~~---~~~~~~l~i~G~g~~~~-----~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~  249 (333)
T PRK09814        182 PFL---KN---WSQGIKLTVFGPNPEDL-----ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNN  249 (333)
T ss_pred             hHH---Hh---cCCCCeEEEECCCcccc-----ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccc
Confidence            321   11   34679999999987644     22348999999999999999998 76665432           1367


Q ss_pred             chHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHH
Q 022615          173 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAAT  252 (294)
Q Consensus       173 ~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~  252 (294)
                      |.++.||||||+|||+++.++..+++   +++.+|++++  +.+++.+++..+  +++.+.+|++++++..+++.--..+
T Consensus       250 P~K~~~ymA~G~PVI~~~~~~~~~~V---~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~  322 (333)
T PRK09814        250 PHKLSLYLAAGLPVIVWSKAAIADFI---VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFT  322 (333)
T ss_pred             hHHHHHHHHCCCCEEECCCccHHHHH---HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhH
Confidence            99999999999999999999999999   8899999998  788999999886  4577899999999987665444444


Q ss_pred             HH
Q 022615          253 RT  254 (294)
Q Consensus       253 ~~  254 (294)
                      ++
T Consensus       323 ~~  324 (333)
T PRK09814        323 KK  324 (333)
T ss_pred             HH
Confidence            33

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.90  E-value=4.5e-22  Score=170.80  Aligned_cols=221  Identities=16%  Similarity=0.180  Sum_probs=163.9

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccH
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL  106 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~  106 (294)
                      .+|+++++|.++++|+.+++.+.+. +.+++++.+++++++.... +.......+.+.....++..++++.|+.+..|++
T Consensus       141 ~~~~~~~ad~i~~~s~~~~~~l~~~-gi~~~ki~v~G~p~~~~f~-~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~  218 (380)
T PRK13609        141 KIWVHREVDRYFVATDHVKKVLVDI-GVPPEQVVETGIPIRSSFE-LKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNV  218 (380)
T ss_pred             cccccCCCCEEEECCHHHHHHHHHc-CCChhHEEEECcccChHHc-CcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence            3467789999999999999999885 5677889888776654322 2222223333333323334566677888888999


Q ss_pred             HHHHHHHHhCCCcEEEEE-cCC-ccHHHHHhhhcCC--CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          107 DFLKRVMDRLPEARIAFI-GDG-PYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       107 ~~l~~~~~~~~~~~l~i~-G~~-~~~~~~~~~~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      ..+++++...++++++++ |.+ ...+.++++....  +|+++|++  +++.++|+.||+++.    ++.|.+++|||+|
T Consensus       219 ~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~  292 (380)
T PRK13609        219 KELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL  292 (380)
T ss_pred             HHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHHHHhccEEEe----CCCchHHHHHHHh
Confidence            999999987788998876 433 3456666665433  69999999  679999999999884    3458899999999


Q ss_pred             CCCEEeec-CCCcc----cccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 022615          183 GIPVVGVR-AGGIP----DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRN  257 (294)
Q Consensus       183 G~pvI~~~-~~~~~----e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  257 (294)
                      |+|+|+++ .++..    +++     ...|..+...|.++++++|.++++|++.+++|++++++..+.++++.+++.++ 
T Consensus       293 g~PvI~~~~~~g~~~~n~~~~-----~~~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~-  366 (380)
T PRK13609        293 GVPVILYKPVPGQEKENAMYF-----ERKGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDIL-  366 (380)
T ss_pred             CCCEEECCCCCCcchHHHHHH-----HhCCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHH-
Confidence            99999975 44321    233     12344444569999999999999999999999999988777899999999988 


Q ss_pred             HHHH
Q 022615          258 EQYN  261 (294)
Q Consensus       258 ~l~~  261 (294)
                      .++.
T Consensus       367 ~~~~  370 (380)
T PRK13609        367 AENH  370 (380)
T ss_pred             Hhhh
Confidence            4443

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.89  E-value=6.9e-22  Score=169.66  Aligned_cols=221  Identities=14%  Similarity=0.234  Sum_probs=162.5

Q ss_pred             HHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHH
Q 022615           28 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  107 (294)
Q Consensus        28 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~  107 (294)
                      +|+.+.+|.+++.|+.+++.+.+. |.+++++.+++++++.....+ ......+.+.+...++..++++.|+++..|+++
T Consensus       142 ~w~~~~~d~~~v~s~~~~~~l~~~-gi~~~ki~v~GiPv~~~f~~~-~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~  219 (391)
T PRK13608        142 NWITPYSTRYYVATKETKQDFIDV-GIDPSTVKVTGIPIDNKFETP-IDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFD  219 (391)
T ss_pred             ccccCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECeecChHhccc-ccHHHHHHHcCCCCCCCEEEEECCCcccchhHH
Confidence            355689999999999999999875 567789999888877543322 222233333333233444567889999889999


Q ss_pred             HHHHHH-HhCCCcEEEEE-cCCc-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC
Q 022615          108 FLKRVM-DRLPEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  183 (294)
Q Consensus       108 ~l~~~~-~~~~~~~l~i~-G~~~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G  183 (294)
                      .+++++ +..++++++++ |.+. ..+.+++... ..++.+.|++  +++.++|+.||+++..    +.|.++.|||++|
T Consensus       220 ~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G  293 (391)
T PRK13608        220 TMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMASSQLMITK----PGGITISEGLARC  293 (391)
T ss_pred             HHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhC
Confidence            999885 44577888655 5443 2344544332 3479999998  7899999999999963    4588999999999


Q ss_pred             CCEEeecC-CC----cccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 022615          184 IPVVGVRA-GG----IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNE  258 (294)
Q Consensus       184 ~pvI~~~~-~~----~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  258 (294)
                      +|+|+++. ++    ...++   .+.+.|+.  ..|.++++++|..+++|++.+++|++++++..+.++++.+++.+. .
T Consensus       294 ~PvI~~~~~pgqe~~N~~~~---~~~G~g~~--~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~-~  367 (391)
T PRK13608        294 IPMIFLNPAPGQELENALYF---EEKGFGKI--ADTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLL-D  367 (391)
T ss_pred             CCEEECCCCCCcchhHHHHH---HhCCcEEE--eCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH-H
Confidence            99999853 32    11222   23444544  458999999999999999999999999999888899999999998 5


Q ss_pred             HHHH
Q 022615          259 QYNA  262 (294)
Q Consensus       259 l~~~  262 (294)
                      +++.
T Consensus       368 l~~~  371 (391)
T PRK13608        368 LIGH  371 (391)
T ss_pred             Hhhh
Confidence            5554

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.88  E-value=6.1e-22  Score=181.67  Aligned_cols=226  Identities=20%  Similarity=0.289  Sum_probs=164.5

Q ss_pred             HhCCeEEecchhhHHHHHHh----cc-----------CCcCceEEeeccccCCCCCCCccchHH---HHHhhcCCCCCce
Q 022615           32 RAADLTLVPSVAIGKDLEAA----RV-----------TAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKPL   93 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~----~~-----------~~~~~i~~i~~gvd~~~~~~~~~~~~~---~~~~~~~~~~~~~   93 (294)
                      -.+|.|-+.+....+.+.+.    .+           ....++.++|+|+|.+.|.+.......   ........+++++
T Consensus       188 l~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~  267 (726)
T PRK14501        188 LGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKI  267 (726)
T ss_pred             hcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEE
Confidence            37888888887766665442    11           112368899999999988654322211   1111112346679


Q ss_pred             EEEeecccccccHHHHHHHHHhC----CC----cEEEEEcCC-----ccHHHHHhhhcCC--------------C-eEEE
Q 022615           94 IVHVGRLGVEKSLDFLKRVMDRL----PE----ARIAFIGDG-----PYREELEKMFTGM--------------P-AVFT  145 (294)
Q Consensus        94 i~~~G~~~~~k~~~~l~~~~~~~----~~----~~l~i~G~~-----~~~~~~~~~~~~~--------------~-v~~~  145 (294)
                      |+++||+.+.||+..+++|++.+    |+    ++|+++|.+     +..+.+++.+.+.              . +.+.
T Consensus       268 il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~  347 (726)
T PRK14501        268 ILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFY  347 (726)
T ss_pred             EEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEe
Confidence            99999999999999999999764    54    678888632     2223333322211              1 3467


Q ss_pred             ecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCC-----CEEeecCCCcccccccCCCCcceeecCCCCHHHHHH
Q 022615          146 GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS  220 (294)
Q Consensus       146 g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-----pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~  220 (294)
                      |.++.+++..+|+.||++++||..||+|++++|||+||+     ||++...|+..++.       .|++++|.|++++++
T Consensus       348 ~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-------~~llv~P~d~~~la~  420 (726)
T PRK14501        348 RSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-------EALLVNPNDIEGIAA  420 (726)
T ss_pred             CCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC-------cCeEECCCCHHHHHH
Confidence            889999999999999999999999999999999999955     55665667666654       388999999999999


Q ss_pred             HHHHHhhCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022615          221 KLEPLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       221 ~i~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~  265 (294)
                      +|.+++.++ +++.+...++++.+.+|||+..+++++ ..++++..
T Consensus       421 ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l-~~l~~~~~  465 (726)
T PRK14501        421 AIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFL-DELREAAE  465 (726)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHh
Confidence            999999854 455555667888888999999999999 56666543

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.87  E-value=8.5e-21  Score=161.27  Aligned_cols=208  Identities=19%  Similarity=0.208  Sum_probs=156.9

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ...+++++.+|.++++|+..++.      .++.++.+++||+|.+.+.+...    +.+.. ..++.+++++.|+....+
T Consensus       126 ~~~~~~~~~~~~vi~~s~~~~~~------~~~~~~~~i~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~~g~~~~~  194 (350)
T cd03785         126 LANRLLARFADRVALSFPETAKY------FPKDKAVVTGNPVREEILALDRE----RARLG-LRPGKPTLLVFGGSQGAR  194 (350)
T ss_pred             HHHHHHHHhhCEEEEcchhhhhc------CCCCcEEEECCCCchHHhhhhhh----HHhcC-CCCCCeEEEEECCcHhHH
Confidence            45677788899999999988876      24578999999999876654211    22222 234556677777665556


Q ss_pred             cHH-HHHHHHHhCC--CcEE-EEEcCCccHHHHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHH
Q 022615          105 SLD-FLKRVMDRLP--EARI-AFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE  178 (294)
Q Consensus       105 ~~~-~l~~~~~~~~--~~~l-~i~G~~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~E  178 (294)
                      +.. .++++++.++  ++.+ .++|.+ ..+.+++...+  .++.+.|++  +++.++|+.||++++++.    +++++|
T Consensus       195 ~~~~~l~~a~~~l~~~~~~~~~i~G~g-~~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~sg----~~t~~E  267 (350)
T cd03785         195 AINEAVPEALAELLRKRLQVIHQTGKG-DLEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRAG----ASTVAE  267 (350)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEEcCCc-cHHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECCC----HhHHHH
Confidence            654 4557777764  5554 467887 55666666654  479999998  999999999999998652    688999


Q ss_pred             HHhcCCCEEeecCCC--------cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCH
Q 022615          179 AMSSGIPVVGVRAGG--------IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW  248 (294)
Q Consensus       179 a~a~G~pvI~~~~~~--------~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~  248 (294)
                      ||++|+|+|+++.++        ..+.+   .+..+|+++++.  |.++++++|..++++++.++++++++++.++++.-
T Consensus       268 am~~G~Pvv~~~~~~~~~~~~~~~~~~l---~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~  344 (350)
T cd03785         268 LAALGLPAILIPLPYAADDHQTANARAL---VKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAA  344 (350)
T ss_pred             HHHhCCCEEEeecCCCCCCcHHHhHHHH---HhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH
Confidence            999999999987653        13455   456789999876  89999999999999999999999999988877777


Q ss_pred             HHHHH
Q 022615          249 RAATR  253 (294)
Q Consensus       249 ~~~~~  253 (294)
                      +++++
T Consensus       345 ~~i~~  349 (350)
T cd03785         345 ERIAD  349 (350)
T ss_pred             HHHHh
Confidence            76653

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.87  E-value=1.4e-20  Score=160.21  Aligned_cols=213  Identities=23%  Similarity=0.216  Sum_probs=160.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ...+++++.+|.+++.++...   .+   .+..++.++|||++.+.+.+...    ..+.. ..++.++++++|+....+
T Consensus       128 ~~~r~~~~~~d~ii~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~gg~~~~~  196 (357)
T PRK00726        128 LANKLLARFAKKVATAFPGAF---PE---FFKPKAVVTGNPVREEILALAAP----PARLA-GREGKPTLLVVGGSQGAR  196 (357)
T ss_pred             HHHHHHHHHhchheECchhhh---hc---cCCCCEEEECCCCChHhhcccch----hhhcc-CCCCCeEEEEECCcHhHH
Confidence            457788999999999987542   22   45689999999999876543211    11111 224566788888887777


Q ss_pred             cHHHHH-HHHHhCCC--cEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          105 SLDFLK-RVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       105 ~~~~l~-~~~~~~~~--~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      +...++ ++++++.+  ..+.++|.|...+..+......+|.+.|++  +++.++|+.||+++.++    .+++++|||+
T Consensus       197 ~~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~~~----g~~~~~Ea~~  270 (357)
T PRK00726        197 VLNEAVPEALALLPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFI--DDMAAAYAAADLVICRA----GASTVAELAA  270 (357)
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehH--hhHHHHHHhCCEEEECC----CHHHHHHHHH
Confidence            765444 88877644  456778988754433333112238899998  89999999999999865    2688999999


Q ss_pred             cCCCEEeecCCCc--------ccccccCCCCcceeecCCCC--HHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHH
Q 022615          182 SGIPVVGVRAGGI--------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAA  251 (294)
Q Consensus       182 ~G~pvI~~~~~~~--------~e~~~~~~~~~~g~~~~~~d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~  251 (294)
                      +|+|+|+++.++.        .+.+   .+.+.|+++++.|  +++++++|.++++|++.+++|++++++..++++.+.+
T Consensus       271 ~g~Pvv~~~~~~~~~~~~~~~~~~i---~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  347 (357)
T PRK00726        271 AGLPAILVPLPHAADDHQTANARAL---VDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERL  347 (357)
T ss_pred             hCCCEEEecCCCCCcCcHHHHHHHH---HHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHH
Confidence            9999999876421        2445   5677899998877  9999999999999999999999999998888999999


Q ss_pred             HHHHHH
Q 022615          252 TRTIRN  257 (294)
Q Consensus       252 ~~~~~~  257 (294)
                      ++.+.+
T Consensus       348 ~~~~~~  353 (357)
T PRK00726        348 ADLIEE  353 (357)
T ss_pred             HHHHHH
Confidence            988873

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.84  E-value=1.3e-19  Score=153.43  Aligned_cols=237  Identities=20%  Similarity=0.246  Sum_probs=177.4

Q ss_pred             cccHHHHHHHHHHhCCeEEecchhhHHHHHHhcc-CCcCceEEeeccccCCCCCCCccchHHHHH----hh-cCCCCCce
Q 022615           20 VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-TAANKIRIWKKGVDSESFHPRFRSSEMRWR----LS-NGEPDKPL   93 (294)
Q Consensus        20 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~-~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~----~~-~~~~~~~~   93 (294)
                      ...+-+++......+|.+++.|..++..++..+. ....++.+.+.++|.+.+.+.........+    .. .....+..
T Consensus       196 ~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~  275 (495)
T KOG0853|consen  196 RHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRF  275 (495)
T ss_pred             hhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceE
Confidence            3445567778888999999999999999988764 333447888888887766541111110000    01 11222556


Q ss_pred             EEEeecccccccHHHHHHHHHhC---------CCcEEEEEcCC-------c---cHHHHHhhhcCC-----CeEEEeccc
Q 022615           94 IVHVGRLGVEKSLDFLKRVMDRL---------PEARIAFIGDG-------P---YREELEKMFTGM-----PAVFTGMLL  149 (294)
Q Consensus        94 i~~~G~~~~~k~~~~l~~~~~~~---------~~~~l~i~G~~-------~---~~~~~~~~~~~~-----~v~~~g~~~  149 (294)
                      +.-+.++.+.|++..+++++..+         ++.++.++|+.       .   +.+.+.+++++.     .+.++...+
T Consensus       276 ~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~  355 (495)
T KOG0853|consen  276 FPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTT  355 (495)
T ss_pred             eeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCc
Confidence            77788889999999999988665         34678888832       1   233445555544     266667777


Q ss_pred             chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHH---HHHHHHHHHh
Q 022615          150 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD---DCLSKLEPLL  226 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~---~l~~~i~~ll  226 (294)
                      +.+-..++..+.+++.....|.||.+.+|||+||+|||+++.||..|++   .++.+|+++++ +.+   .+++++.++.
T Consensus       356 ~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV---~~~~tG~l~dp-~~e~~~~~a~~~~kl~  431 (495)
T KOG0853|consen  356 RVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIV---VHGVTGLLIDP-GQEAVAELADALLKLR  431 (495)
T ss_pred             hHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEE---EcCCcceeeCC-chHHHHHHHHHHHHHh
Confidence            7777788888887766544599999999999999999999999999999   99999999999 555   6999999999


Q ss_pred             hChHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHH
Q 022615          227 YNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYN  261 (294)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~l~~  261 (294)
                      .|++.+.+|++++++.+++ |+|..+.+++. .+..
T Consensus       432 ~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~-~~~~  466 (495)
T KOG0853|consen  432 RDPELWARMGKNGLKRVKEMFSWQHYSERIA-SVLG  466 (495)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHhH
Confidence            9999999999999999966 99988888887 4443

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=1.2e-18  Score=147.21  Aligned_cols=218  Identities=41%  Similarity=0.663  Sum_probs=172.9

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCC-CceEEEeecccccccHHHHHH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKR  111 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~k~~~~l~~  111 (294)
                      ..+.+++.+......+.....  ..++.++|++++...+.+...        ...... ...++++|++.+.|+++.+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~g~~~~~k~~~~~i~  219 (381)
T COG0438         150 LADRVIAVSPALKELLEALGV--PNKIVVIPNGIDTEKFAPARI--------GLLPEGGKFVVLYVGRLDPEKGLDLLIE  219 (381)
T ss_pred             cccEEEECCHHHHHHHHHhCC--CCCceEecCCcCHHHcCcccc--------CCCcccCceEEEEeeccChhcCHHHHHH
Confidence            378888888888676666543  237899999999887764200        001112 368999999999999999999


Q ss_pred             HHHhCCC----cEEEEEcCCccH-HHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          112 VMDRLPE----ARIAFIGDGPYR-EELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       112 ~~~~~~~----~~l~i~G~~~~~-~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      ++..++.    +.+.++|.+... ..+.+...    ..++.+.|.++.+++..+++.||++++|+..|++|..++|||++
T Consensus       220 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~  299 (381)
T COG0438         220 AAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA  299 (381)
T ss_pred             HHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc
Confidence            9988743    789999988752 33333333    34689999998888999999999999999889999999999999


Q ss_pred             CCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 022615          183 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       183 G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~  261 (294)
                      |+|||+++.++..+++   .++..|+++...+.+++++++..++++++.++.+.+.+.+.+ +.|+|+..++.+. .++.
T Consensus       300 g~pvi~~~~~~~~e~~---~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  375 (381)
T COG0438         300 GTPVIASDVGGIPEVV---EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLL-ELYE  375 (381)
T ss_pred             CCcEEECCCCChHHHh---cCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHH
Confidence            9999999999999999   556567777766899999999999998877778877555555 5799999999988 6666


Q ss_pred             HHH
Q 022615          262 AAI  264 (294)
Q Consensus       262 ~~~  264 (294)
                      ...
T Consensus       376 ~~~  378 (381)
T COG0438         376 ELL  378 (381)
T ss_pred             HHH
Confidence            553

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.83  E-value=1e-18  Score=150.07  Aligned_cols=239  Identities=23%  Similarity=0.280  Sum_probs=182.4

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHH-hc--------cCCcCceEEeeccccCCCCCCCccch------------H----
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEA-AR--------VTAANKIRIWKKGVDSESFHPRFRSS------------E----   79 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~-~~--------~~~~~~i~~i~~gvd~~~~~~~~~~~------------~----   79 (294)
                      .++|--+..+|.|.++|....+.+.. .+        .....++.-|-||+|.+.++|.....            .    
T Consensus       200 ~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk  279 (487)
T COG0297         200 SFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENK  279 (487)
T ss_pred             hhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHH
Confidence            57788888999999999998888761 11        11235788999999999988754430            0    


Q ss_pred             --HHHHhhcC-CCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcCC--CeEEEecccc
Q 022615           80 --MRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLG  150 (294)
Q Consensus        80 --~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~~--~v~~~g~~~~  150 (294)
                        ...+.... ..+.+.+.++||+..+||++.+++++..+  ...+++++|.|.  ....+..+.+..  ++...-..+.
T Consensus       280 ~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~  359 (487)
T COG0297         280 VALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDE  359 (487)
T ss_pred             HHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecH
Confidence              11112222 23568999999999999999999999876  458999999882  223444444433  3444445555


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC-----CCCcceeecCCCCHHHHHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED-----QDGKIGYLFNPGDLDDCLSKLEPL  225 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~-----~~~~~g~~~~~~d~~~l~~~i~~l  225 (294)
                      .-...+++.||++++||++|++|++-++||.+|+++|+..+||..+.+.+.     ....+|+++.+.++++++.+|...
T Consensus       360 ~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA  439 (487)
T COG0297         360 PLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRA  439 (487)
T ss_pred             HHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHH
Confidence            667799999999999999999999999999999999999999999999331     125799999999999999999987


Q ss_pred             hh---ChHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 022615          226 LY---NQEL-RETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       226 l~---~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      +.   +++. ++.+..++..  ..|+|+..++++. ++|+.++..
T Consensus       440 ~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~-~lY~~~~~~  481 (487)
T COG0297         440 LVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYV-ELYKPLLSK  481 (487)
T ss_pred             HHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHH-HHHHHHhcc
Confidence            64   4444 6666666555  5799999999999 899998653

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.83  E-value=4.5e-19  Score=152.93  Aligned_cols=224  Identities=18%  Similarity=0.120  Sum_probs=169.2

Q ss_pred             hCCeEEecchhhHHHHHHhc----cC--------------------------------CcCceEEeeccccCCCCCCCcc
Q 022615           33 AADLTLVPSVAIGKDLEAAR----VT--------------------------------AANKIRIWKKGVDSESFHPRFR   76 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~----~~--------------------------------~~~~i~~i~~gvd~~~~~~~~~   76 (294)
                      .+|.|-+.+....+.|.+.-    +.                                ..-++.++|.|||++.|.+...
T Consensus       188 ~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~  267 (487)
T TIGR02398       188 CCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALA  267 (487)
T ss_pred             cCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhc
Confidence            78999998888777775521    10                                1113688999999998855322


Q ss_pred             ch---HHHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC----C----CcEEEEEcCCc---------cHHHHHhh
Q 022615           77 SS---EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGP---------YREELEKM  136 (294)
Q Consensus        77 ~~---~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~----~~~l~i~G~~~---------~~~~~~~~  136 (294)
                      ..   +..........++++|+.++|+++.||+...++|++++    |    ++.|+++|.++         ....++++
T Consensus       268 ~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~  347 (487)
T TIGR02398       268 AASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQA  347 (487)
T ss_pred             CchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHH
Confidence            11   11111111223678999999999999999999998765    5    37888888643         22333443


Q ss_pred             hcCC-----------CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCC----CEEeecCCCcccccccC
Q 022615          137 FTGM-----------PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPED  201 (294)
Q Consensus       137 ~~~~-----------~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~----pvI~~~~~~~~e~~~~~  201 (294)
                      ..+.           -+.+.+.++.+++..+|+.||+++.++..||++++..||++|+.    |+|.|..+|..+.+   
T Consensus       348 v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l---  424 (487)
T TIGR02398       348 VGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL---  424 (487)
T ss_pred             HHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc---
Confidence            3222           15678999999999999999999999999999999999999988    99999999888666   


Q ss_pred             CCCcceeecCCCCHHHHHHHHHHHhhCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 022615          202 QDGKIGYLFNPGDLDDCLSKLEPLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       202 ~~~~~g~~~~~~d~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~  262 (294)
                         ..+++++|.|+++++++|.+++..+ +++++.-+..++.+.+++....++.+++.+..+
T Consensus       425 ---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~~  483 (487)
T TIGR02398       425 ---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQ  483 (487)
T ss_pred             ---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhhc
Confidence               3579999999999999999999865 466666666777788899999999888766443

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.83  E-value=2.7e-19  Score=151.94  Aligned_cols=206  Identities=19%  Similarity=0.253  Sum_probs=148.7

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ...+++++.+|.++++|+.+++.+         +..+++||++...+.+...    +.... ..++.++++++|+....|
T Consensus       127 ~~~~~~~~~~d~ii~~~~~~~~~~---------~~~~i~n~v~~~~~~~~~~----~~~~~-~~~~~~~i~~~gg~~~~~  192 (348)
T TIGR01133       127 LTNKLLSRFAKKVLISFPGAKDHF---------EAVLVGNPVRQEIRSLPVP----RERFG-LREGKPTILVLGGSQGAK  192 (348)
T ss_pred             HHHHHHHHHhCeeEECchhHhhcC---------CceEEcCCcCHHHhcccch----hhhcC-CCCCCeEEEEECCchhHH
Confidence            457888999999999999887665         2378999998765543211    11121 234667888998776677


Q ss_pred             cHH-HHHHHHHhCC--CcEEEEE-cCCccHHHHHhhhcCCCe-EEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          105 SLD-FLKRVMDRLP--EARIAFI-GDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       105 ~~~-~l~~~~~~~~--~~~l~i~-G~~~~~~~~~~~~~~~~v-~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      +.. .++++++.+.  +.+++++ |++ ..+.+++.....++ ....+.. .++.++|+.||+++.++   | |++++||
T Consensus       193 ~~~~~l~~a~~~l~~~~~~~~~~~g~~-~~~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea  266 (348)
T TIGR01133       193 ILNELVPKALAKLAEKGIQIVHQTGKN-DLEKVKNVYQELGIEAIVTFID-ENMAAAYAAADLVISRA---G-ASTVAEL  266 (348)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEECCcc-hHHHHHHHHhhCCceEEecCcc-cCHHHHHHhCCEEEECC---C-hhHHHHH
Confidence            754 4557776663  4566444 544 34666666665543 2334443 38999999999999864   2 6899999


Q ss_pred             HhcCCCEEeecCCCc-------ccccccCCCCcceeecCCCC--HHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHH
Q 022615          180 MSSGIPVVGVRAGGI-------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  250 (294)
Q Consensus       180 ~a~G~pvI~~~~~~~-------~e~~~~~~~~~~g~~~~~~d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~  250 (294)
                      |++|+|+|+++.++.       .+++   .++.+|+++++.|  +++++++|..+++|++.+++|++++++.+++...++
T Consensus       267 ~~~g~Pvv~~~~~~~~~~~~~~~~~i---~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~  343 (348)
T TIGR01133       267 AAAGVPAILIPYPYAADDQYYNAKFL---EDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKR  343 (348)
T ss_pred             HHcCCCEEEeeCCCCccchhhHHHHH---HHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHH
Confidence            999999999876542       2466   5688999998776  999999999999999999999999988776666665


Q ss_pred             HHH
Q 022615          251 ATR  253 (294)
Q Consensus       251 ~~~  253 (294)
                      +++
T Consensus       344 i~~  346 (348)
T TIGR01133       344 IAE  346 (348)
T ss_pred             HHh
Confidence            554

RL J Bacteriol 1993 Mar;175(6):1841-3

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.81  E-value=2.5e-18  Score=136.75  Aligned_cols=219  Identities=15%  Similarity=0.215  Sum_probs=167.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      .+..+.-..||.+.+.|.|+.+++.+....  .++.+++.+.+.+.+         .........+...++++|.++|+|
T Consensus       214 ~lY~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~l---------ks~~~te~~r~~~ll~l~Q~RPEK  282 (465)
T KOG1387|consen  214 LLYQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDL---------KSKFGTEGERENQLLSLAQFRPEK  282 (465)
T ss_pred             HHHHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHH---------HHHhcccCCcceEEEEEeecCccc
Confidence            456666678999999999999999999865  467777655444322         222222244567899999999999


Q ss_pred             cHHHHHHHHH----hC------CCcEEEEEcCCc---cHHH---HHhhhcC----CCeEEEecccchhHHHHHhcCCEEE
Q 022615          105 SLDFLKRVMD----RL------PEARIAFIGDGP---YREE---LEKMFTG----MPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus       105 ~~~~l~~~~~----~~------~~~~l~i~G~~~---~~~~---~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      +.. +++.+.    +.      ++++|+++|...   +.+.   ++++...    .+|.|.-.+|.+++..+|+.|.+.+
T Consensus       283 nH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGv  361 (465)
T KOG1387|consen  283 NHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATIGV  361 (465)
T ss_pred             ccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccceeeh
Confidence            998 444332    11      468999999643   2222   3333332    2599999999999999999999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCC-CcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHH
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQE  242 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~-~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~  242 (294)
                      ...+.|.||..+.||||+|+-+|+.+.+ ..-+++.+.....+|++.+  +.++.++++.+++. +.+++..++.+++..
T Consensus       362 h~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s  439 (465)
T KOG1387|consen  362 HTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKS  439 (465)
T ss_pred             hhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            9999999999999999999888887654 5567775544456888886  88999999999986 777799999999999


Q ss_pred             HHhCCHHHHHHHHHH
Q 022615          243 MEKYDWRAATRTIRN  257 (294)
Q Consensus       243 ~~~~s~~~~~~~~~~  257 (294)
                      +.+|+-..+.+.+.+
T Consensus       440 ~~RFsE~~F~kd~~~  454 (465)
T KOG1387|consen  440 LARFGELKFDKDWEN  454 (465)
T ss_pred             HHHhhHHHHHHhHhH
Confidence            999998888888874

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.81  E-value=1.4e-19  Score=132.31  Aligned_cols=127  Identities=31%  Similarity=0.536  Sum_probs=93.5

Q ss_pred             ceEEEeecccccccHHHHHH-HHHh----CCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEee
Q 022615           92 PLIVHVGRLGVEKSLDFLKR-VMDR----LPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~-~~~~----~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      +++++.|++.+.|+++.+++ +++.    .|+++|.|+|.++.  .++++ ...+|.++|++  +++.++++.||+++.|
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~-~~~~v~~~g~~--~e~~~~l~~~dv~l~p   77 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRL-RRPNVRFHGFV--EELPEILAAADVGLIP   77 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCH-HHCTEEEE-S---HHHHHHHHC-SEEEE-
T ss_pred             ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHh-cCCCEEEcCCH--HHHHHHHHhCCEEEEE
Confidence            57899999999999999999 7544    48999999999766  35555 44599999999  7999999999999999


Q ss_pred             cC-CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhC
Q 022615          167 SE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  228 (294)
Q Consensus       167 s~-~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~  228 (294)
                      +. .+++|++++|||++|+|||+++. +..++.   .....|.++ .+|+++++++|.++++|
T Consensus        78 ~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~---~~~~~~~~~-~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   78 SRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIV---EEDGCGVLV-ANDPEELAEAIERLLND  135 (135)
T ss_dssp             BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS------SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred             eeCCCcCcHHHHHHHHhCCCEEECCc-chhhhe---eecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence            86 67899999999999999999999 566676   445677767 77999999999999865

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.77  E-value=3e-17  Score=144.01  Aligned_cols=205  Identities=17%  Similarity=0.140  Sum_probs=160.0

Q ss_pred             HHHhCCeEEecchhhHHHHHHhccCC--cCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEee--ccccccc
Q 022615           30 LHRAADLTLVPSVAIGKDLEAARVTA--ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG--RLGVEKS  105 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~~~~~--~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G--~~~~~k~  105 (294)
                      -+..+|.+|+.++...+.+...++..  ..++..||.+.- ....+.            .......+++++  |+ +.|.
T Consensus       269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~~~~------------s~r~~~~~I~v~idrL-~ek~  334 (519)
T TIGR03713       269 SLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLRLGQ------------SQQLYETEIGFWIDGL-SDEE  334 (519)
T ss_pred             ChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEecCh------------hhcccceEEEEEcCCC-ChHH
Confidence            35688999999988888887766421  134566775432 211111            012334577888  99 9999


Q ss_pred             HHHHHHHHH----hCCCcEEEEEcCCccH---HHHHh----hhcC-----------------------------CCeEEE
Q 022615          106 LDFLKRVMD----RLPEARIAFIGDGPYR---EELEK----MFTG-----------------------------MPAVFT  145 (294)
Q Consensus       106 ~~~l~~~~~----~~~~~~l~i~G~~~~~---~~~~~----~~~~-----------------------------~~v~~~  145 (294)
                      ++.+++++.    +.|+++|.+.|.+...   +.+.+    +..+                             ..|.+.
T Consensus       335 ~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~  414 (519)
T TIGR03713       335 LQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFT  414 (519)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEE
Confidence            888887774    4589999999976532   23322    2112                             368899


Q ss_pred             ecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHH
Q 022615          146 GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL  225 (294)
Q Consensus       146 g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~l  225 (294)
                      |+.+..++.+.|..+.++|.+|..+|++ ..+||+++|+|+|   .-+..+++   .++.+|+++  +|..+++++|..+
T Consensus       415 gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V---~d~~NG~li--~d~~~l~~al~~~  485 (519)
T TIGR03713       415 TLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYV---EHNKNGYII--DDISELLKALDYY  485 (519)
T ss_pred             ecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceee---EcCCCcEEe--CCHHHHHHHHHHH
Confidence            9987779999999999999999999999 9999999999999   43457899   899999999  4999999999999


Q ss_pred             hhChHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 022615          226 LYNQELRETMGQAARQEMEKYDWRAATRTIRN  257 (294)
Q Consensus       226 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  257 (294)
                      +.+++.++++...+.+.+++||-+++.++|.+
T Consensus       486 L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~  517 (519)
T TIGR03713       486 LDNLKNWNYSLAYSIKLIDDYSSENIIERLNE  517 (519)
T ss_pred             HhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence            99999999999999999999999999999873

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=5.2e-17  Score=129.35  Aligned_cols=232  Identities=18%  Similarity=0.253  Sum_probs=175.3

Q ss_pred             CcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecccc-----CC----CCCCCcc----------c
Q 022615           17 SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD-----SE----SFHPRFR----------S   77 (294)
Q Consensus        17 ~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd-----~~----~~~~~~~----------~   77 (294)
                      ..+.+..+++|+.+-+.||.-+|+++.|++.+.+.+|+.  +..+++.-..     .+    .|.+...          .
T Consensus       153 h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q  230 (444)
T KOG2941|consen  153 HPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQ  230 (444)
T ss_pred             CchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccc
Confidence            345677889999999999999999999999999988864  4555543211     11    1111100          0


Q ss_pred             hH-----HHHHh------hcCCCCCceEEEeecccccccHHHHHHHHHhC-----------CCcEEEEEcCCccHHHHHh
Q 022615           78 SE-----MRWRL------SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----------PEARIAFIGDGPYREELEK  135 (294)
Q Consensus        78 ~~-----~~~~~------~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~-----------~~~~l~i~G~~~~~~~~~~  135 (294)
                      ..     ...+.      ....+...+++....+.++.++..+++|+..+           |.+-++|.|.|+.++...+
T Consensus       231 ~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~  310 (444)
T KOG2941|consen  231 DKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQ  310 (444)
T ss_pred             cchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHH
Confidence            00     00000      01122334677778899999999999999732           6788889999999999999


Q ss_pred             hhcCCC---e-EEEecccchhHHHHHhcCCEEEeecC---CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCccee
Q 022615          136 MFTGMP---A-VFTGMLLGEELSQAYASGDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY  208 (294)
Q Consensus       136 ~~~~~~---v-~~~g~~~~~~~~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~  208 (294)
                      .+.+.+   | ....++.-+|.+.++..||+.|+...   .--.|+++.+...||+||++-+...+.|.+   +++.||+
T Consensus       311 ~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELV---kh~eNGl  387 (444)
T KOG2941|consen  311 EIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELV---KHGENGL  387 (444)
T ss_pred             HHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHH---hcCCCce
Confidence            998775   3 34677888999999999998887533   234699999999999999999999999999   9999999


Q ss_pred             ecCCCCHHHHHHHHHHHhh----ChHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          209 LFNPGDLDDCLSKLEPLLY----NQELRETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       209 ~~~~~d~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +|.  |.+++++.+..++.    +.+.+.++.++.++. ++..|+..-++..
T Consensus       388 vF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W~~~~  436 (444)
T KOG2941|consen  388 VFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWDESWERTA  436 (444)
T ss_pred             Eec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHHHHhh
Confidence            998  99999999999998    677888999888887 4466665554443

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.76  E-value=5.1e-17  Score=148.96  Aligned_cols=226  Identities=18%  Similarity=0.208  Sum_probs=167.5

Q ss_pred             hCCeEEecchhhHHHHHHhc----cC-----------CcCceEEeeccccCCCCCCCccch---HHHHHhhcCCCCCceE
Q 022615           33 AADLTLVPSVAIGKDLEAAR----VT-----------AANKIRIWKKGVDSESFHPRFRSS---EMRWRLSNGEPDKPLI   94 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~----~~-----------~~~~i~~i~~gvd~~~~~~~~~~~---~~~~~~~~~~~~~~~i   94 (294)
                      .||.|-+.+....+.|.+.-    +.           ..-++.++|.|||++.|.......   ...........++.+|
T Consensus       287 ~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiI  366 (934)
T PLN03064        287 AADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVM  366 (934)
T ss_pred             cCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEE
Confidence            78999999988887776521    11           012366789999998886432221   1111111123467799


Q ss_pred             EEeecccccccHHHHHHHHHhC----CCcE--EEEE-------cCCccHHHHHhhh----cCCC----------eEE-Ee
Q 022615           95 VHVGRLGVEKSLDFLKRVMDRL----PEAR--IAFI-------GDGPYREELEKMF----TGMP----------AVF-TG  146 (294)
Q Consensus        95 ~~~G~~~~~k~~~~l~~~~~~~----~~~~--l~i~-------G~~~~~~~~~~~~----~~~~----------v~~-~g  146 (294)
                      +.++++++.||+...++|++.+    |+.+  ++++       +.++..+.++..+    ...|          |.+ ..
T Consensus       367 lgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~  446 (934)
T PLN03064        367 LGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDR  446 (934)
T ss_pred             EEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEecc
Confidence            9999999999999999988764    5532  4444       3334444433332    2222          443 34


Q ss_pred             cccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCC----CEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  222 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~----pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i  222 (294)
                      .++.+++..+|+.||+++.++..||++++..|||+|+.    ++|.|...|..+.+     +..+++++|.|.++++++|
T Consensus       447 ~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L-----~~~AllVNP~D~~~vA~AI  521 (934)
T PLN03064        447 SLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVAASI  521 (934)
T ss_pred             CCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh-----CCceEEECCCCHHHHHHHH
Confidence            47889999999999999999999999999999999954    55558888888777     5568999999999999999


Q ss_pred             HHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 022615          223 EPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       223 ~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~  263 (294)
                      .+++. +++++++..+..++.+..+++...++.+++.+.+..
T Consensus       522 ~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        522 AQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence            99998 888889999999999999999999999997776654

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.75  E-value=1.7e-17  Score=141.72  Aligned_cols=216  Identities=20%  Similarity=0.191  Sum_probs=147.9

Q ss_pred             HHHH-HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCC-ccchHHHHHhhcCCCCCceEEEee-cc-c
Q 022615           27 IKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPR-FRSSEMRWRLSNGEPDKPLIVHVG-RL-G  101 (294)
Q Consensus        27 ~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~G-~~-~  101 (294)
                      .+++ .+.+|.++++|+..++.+.+. |.+++++.+++|++ |....... ......+...  . .+..++++.| +. .
T Consensus       134 ~r~~~~~~ad~~~~~s~~~~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~--~-~~~~~vl~~~hr~~~  209 (365)
T TIGR00236       134 NRQLTGHIADLHFAPTEQAKDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEF--G-EDKRYILLTLHRREN  209 (365)
T ss_pred             HHHHHHHHHHhccCCCHHHHHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhc--C-CCCCEEEEecCchhh
Confidence            3443 346899999999999999886 57788999999996 43221111 1111222222  2 2334555555 33 2


Q ss_pred             ccccHHHHHHHHHhC----CCcEEEEEcCC-c-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          102 VEKSLDFLKRVMDRL----PEARIAFIGDG-P-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~----~~~~l~i~G~~-~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      ..|+++.++++++.+    +++++++.|.+ . ....+.+... ..+|.+.+.++..++..+++.||+++.+|     |.
T Consensus       210 ~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~  284 (365)
T TIGR00236       210 VGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GG  284 (365)
T ss_pred             hhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hh
Confidence            348899999998765    57888887543 2 2222333322 24799999999999999999999999877     55


Q ss_pred             HHHHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHH
Q 022615          175 VVLEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  253 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~  253 (294)
                      .++|||+||+|||++ +.++..+.+   ..+ .++++ +.|++++++++.+++++++.+++++.+...+.+..+++++++
T Consensus       285 ~~~EA~a~g~PvI~~~~~~~~~e~~---~~g-~~~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~  359 (365)
T TIGR00236       285 VQEEAPSLGKPVLVLRDTTERPETV---EAG-TNKLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVE  359 (365)
T ss_pred             HHHHHHHcCCCEEECCCCCCChHHH---hcC-ceEEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHH
Confidence            689999999999996 667777777   545 44455 369999999999999998888887765533223345555555


Q ss_pred             HHH
Q 022615          254 TIR  256 (294)
Q Consensus       254 ~~~  256 (294)
                      .+.
T Consensus       360 ~l~  362 (365)
T TIGR00236       360 ELL  362 (365)
T ss_pred             HHH
Confidence            444

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.73  E-value=5.7e-17  Score=138.48  Aligned_cols=199  Identities=17%  Similarity=0.182  Sum_probs=140.6

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc--
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--  102 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--  102 (294)
                      ....+.+.+|.++++|+..++.+.+. |.+++++.+++|++ |...+.+.........+.....++..++++.|+...  
T Consensus       134 ~r~~~~~~ad~~~~~s~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~  212 (363)
T cd03786         134 NRHAIDKLSDLHFAPTEEARRNLLQE-GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVD  212 (363)
T ss_pred             HHHHHHHHhhhccCCCHHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccC
Confidence            33446788999999999999999875 57788999999985 433222111111111111222344556778888764  


Q ss_pred             -cccHHHHHHHHHhCC--CcEEEEEcCCccHHHHHhhhc-----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          103 -EKSLDFLKRVMDRLP--EARIAFIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       103 -~k~~~~l~~~~~~~~--~~~l~i~G~~~~~~~~~~~~~-----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                       .|+++.++++++.+.  ++.+++.|.+...+.+++...     ..++.+.|....+++..+|+.||+++.+|.     .
T Consensus       213 ~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-----g  287 (363)
T cd03786         213 DGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-----G  287 (363)
T ss_pred             ChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-----c
Confidence             789999999998874  366766677666666666543     347899998888999999999999999983     3


Q ss_pred             HHHHHHhcCCCEEeecC-CCcccccccCCCCcceeecCCC-CHHHHHHHHHHHhhChHHHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYLFNPG-DLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~~~~g~~~~~~-d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      ...||+++|+|+|+++. +...+.+   +   +|..+... |.++++++|.++++++..+..|.
T Consensus       288 i~~Ea~~~g~PvI~~~~~~~~~~~~---~---~g~~~~~~~~~~~i~~~i~~ll~~~~~~~~~~  345 (363)
T cd03786         288 IQEEASFLGVPVLNLRDRTERPETV---E---SGTNVLVGTDPEAILAAIEKLLSDEFAYSLMS  345 (363)
T ss_pred             HHhhhhhcCCCEEeeCCCCccchhh---h---eeeEEecCCCHHHHHHHHHHHhcCchhhhcCC
Confidence            57899999999999864 3344554   2   33333332 69999999999999887665553

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.69  E-value=2.1e-15  Score=129.67  Aligned_cols=200  Identities=17%  Similarity=0.145  Sum_probs=134.8

Q ss_pred             HHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCce-EEEeecc-ccc-c
Q 022615           28 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL-IVHVGRL-GVE-K  104 (294)
Q Consensus        28 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~G~~-~~~-k  104 (294)
                      +.+.+.+|.+++.|+..++.+.+.+ .   ++.+++|++....... ......+.+... .++.++ +++.|.- ... +
T Consensus       129 ~~~~~~~d~i~~~~~~~~~~~~~~g-~---~~~~~G~p~~~~~~~~-~~~~~~~~~l~~-~~~~~~il~~~gsr~~~~~~  202 (380)
T PRK00025        129 FKIAKATDHVLALFPFEAAFYDKLG-V---PVTFVGHPLADAIPLL-PDRAAARARLGL-DPDARVLALLPGSRGQEIKR  202 (380)
T ss_pred             HHHHHHHhhheeCCccCHHHHHhcC-C---CeEEECcCHHHhcccc-cChHHHHHHcCC-CCCCCEEEEECCCCHHHHHH
Confidence            4468899999999999999987643 3   3666666654332211 122233333332 334454 4455533 222 3


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcC-CccHHHHHhhhcCC---CeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGD-GPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~-~~~~~~~~~~~~~~---~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      ..+.++++++.+    ++++++++|. +...+.+++.....   ++.+    ..+++..+|+.||+++++|     |...
T Consensus       203 ~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~----~~~~~~~~~~~aDl~v~~s-----G~~~  273 (380)
T PRK00025        203 LLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTL----LDGQKREAMAAADAALAAS-----GTVT  273 (380)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEE----EcccHHHHHHhCCEEEECc-----cHHH
Confidence            467777776544    6788988876 55566676666543   3333    2368999999999999987     7888


Q ss_pred             HHHHhcCCCEEee-----------------cCCCcccccccCCCC--cceeecCCCCHHHHHHHHHHHhhChHHHHHHHH
Q 022615          177 LEAMSSGIPVVGV-----------------RAGGIPDIIPEDQDG--KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  237 (294)
Q Consensus       177 ~Ea~a~G~pvI~~-----------------~~~~~~e~~~~~~~~--~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  237 (294)
                      +|+|++|+|+|+.                 +.++..+++   .++  ..++..+..|++++++++.++++|++.+++|++
T Consensus       274 lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~  350 (380)
T PRK00025        274 LELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL---AGRELVPELLQEEATPEKLARALLPLLADGARRQALLE  350 (380)
T ss_pred             HHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh---cCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence            8999999999977                 233344555   333  345666777899999999999999999999999


Q ss_pred             HHHHHHHh
Q 022615          238 AARQEMEK  245 (294)
Q Consensus       238 ~~~~~~~~  245 (294)
                      ++.+..+.
T Consensus       351 ~~~~~~~~  358 (380)
T PRK00025        351 GFTELHQQ  358 (380)
T ss_pred             HHHHHHHH
Confidence            88666544

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.69  E-value=1.7e-15  Score=120.40  Aligned_cols=169  Identities=34%  Similarity=0.427  Sum_probs=116.9

Q ss_pred             HhCCeEEecchhhHHHHH--HhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHH
Q 022615           32 RAADLTLVPSVAIGKDLE--AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  109 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~--~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l  109 (294)
                      .+.|.|++.+........  ... ....++.+..+............  ......    .......|+|++.+.||++.+
T Consensus        50 ~~~D~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~--~~~~~~----~~~~~~~~~g~~~~~k~~~~~  122 (229)
T cd01635          50 FKPDVVHAHGYYPAPLALLLAAR-LLGIPLVLTVHGVNRSLLEGVPL--SLLALS----IGLADKVFVGRLAPEKGLDDL  122 (229)
T ss_pred             cCCCEEEEcCCCcHHHHHHHHHh-hCCCCEEEEEcCccHhhcccCcH--HHHHHH----HhhcceEEEEeecccCCHHHH
Confidence            589999999988777542  111 11123333333322221111111  111100    011223399999999999999


Q ss_pred             HHHHHhC----CCcEEEEEcCCccHHHHHh----hhcCCCeEEEecccc-hhHHHHHhcCCEEEeecCCCCcchHHHHHH
Q 022615          110 KRVMDRL----PEARIAFIGDGPYREELEK----MFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSESETLGLVVLEAM  180 (294)
Q Consensus       110 ~~~~~~~----~~~~l~i~G~~~~~~~~~~----~~~~~~v~~~g~~~~-~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~  180 (294)
                      ++++..+    ++++++++|.+........    .....+|.+.|+++. +++..+++.||++++|+..|++|++++|||
T Consensus       123 ~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam  202 (229)
T cd01635         123 IEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAM  202 (229)
T ss_pred             HHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHH
Confidence            9999876    4799999998876655443    223447999999844 556666666999999999999999999999


Q ss_pred             hcCCCEEeecCCCcccccccCCCCcceeec
Q 022615          181 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLF  210 (294)
Q Consensus       181 a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~  210 (294)
                      ++|+|+|+++.++..+++   .++.+|+++
T Consensus       203 ~~g~pvi~s~~~~~~e~i---~~~~~g~~~  229 (229)
T cd01635         203 ACGLPVIATDVGGPPEIV---EDGLTGLLV  229 (229)
T ss_pred             hCCCCEEEcCCCCcceEE---ECCCceEEC
Confidence            999999999999999988   677888764

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.65  E-value=2e-14  Score=123.53  Aligned_cols=193  Identities=11%  Similarity=0.160  Sum_probs=144.4

Q ss_pred             HhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHHHH
Q 022615           32 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  111 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~  111 (294)
                      .+.|.||+.++...+.+.++++ +..++.++|-|+-.+   .. ..          ......++.++.   ...++.+.+
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i~~---~~-~~----------~r~~~~~l~~t~---s~~I~~i~~  299 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYLYP---FK-KD----------NKYRKQALILTN---SDQIEHLEE  299 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEEEe---ec-cc----------cCCcccEEEECC---HHHHHHHHH
Confidence            7899999999998888888775 346788888887622   11 10          112334666662   555666777


Q ss_pred             HHHhCCCcEEEEEcCCcc-HHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeec
Q 022615          112 VMDRLPEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  190 (294)
Q Consensus       112 ~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~  190 (294)
                      +.+.+|+++|.| |.+.+ ...+.++.+..|++..+.+...++.++|..||+++..+..|++++.+.||++.|+||++.+
T Consensus       300 Lv~~lPd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd  378 (438)
T TIGR02919       300 IVQALPDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFE  378 (438)
T ss_pred             HHHhCCCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEe
Confidence            778889999999 76655 5667666445677766666666899999999999999999999999999999999999998


Q ss_pred             CC-CcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHH
Q 022615          191 AG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR  249 (294)
Q Consensus       191 ~~-~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~  249 (294)
                      .. +..+++   .+   |.+++.+++++++++|.+++.+++.+++.-..-++.+..-+.+
T Consensus       379 ~t~~~~~~i---~~---g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~  432 (438)
T TIGR02919       379 ETAHNRDFI---AS---ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE  432 (438)
T ss_pred             cccCCcccc---cC---CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence            76 334555   22   7899999999999999999999987666554444444334433

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.62  E-value=9.8e-14  Score=123.55  Aligned_cols=232  Identities=17%  Similarity=0.146  Sum_probs=174.2

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccC-------CcCceEEeeccccCCCCCCCccchH------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVT-------AANKIRIWKKGVDSESFHPRFRSSE------------------   79 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------~~~~i~~i~~gvd~~~~~~~~~~~~------------------   79 (294)
                      .+.+..+..+|.|.++|+-..+.....++.       ...++.-|.||||...+.+.....-                  
T Consensus       254 nm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~  333 (601)
T TIGR02094       254 NMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEEL  333 (601)
T ss_pred             eHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhh
Confidence            678888899999999999888755443321       1235888999999998866321100                  


Q ss_pred             -----------H-------HHHhhc--------------------------CCCCCceEEEeecccccccHHHHHHHHHh
Q 022615           80 -----------M-------RWRLSN--------------------------GEPDKPLIVHVGRLGVEKSLDFLKRVMDR  115 (294)
Q Consensus        80 -----------~-------~~~~~~--------------------------~~~~~~~i~~~G~~~~~k~~~~l~~~~~~  115 (294)
                                 .       +.++..                          ..++.+.+++++|+..+|+.++++..+.+
T Consensus       334 ~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~  413 (601)
T TIGR02094       334 WEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLER  413 (601)
T ss_pred             hhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHH
Confidence                       0       001100                          34567799999999999999998887765


Q ss_pred             C--------CCcEEEEEcCCc--------cHHHHHhhhcC--C--CeEEEecccchhHHHHHhcCCEEEe-ecC-CCCcc
Q 022615          116 L--------PEARIAFIGDGP--------YREELEKMFTG--M--PAVFTGMLLGEELSQAYASGDVFVM-PSE-SETLG  173 (294)
Q Consensus       116 ~--------~~~~l~i~G~~~--------~~~~~~~~~~~--~--~v~~~g~~~~~~~~~~~~~ad~~l~-ps~-~e~~~  173 (294)
                      +        .++++++.|.+.        ..+.+.++.++  .  +|.++...+..--..+++.||++++ |+. .|.+|
T Consensus       414 l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacG  493 (601)
T TIGR02094       414 LARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASG  493 (601)
T ss_pred             HHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCch
Confidence            5        368999999764        33445555544  2  5777766666667789999999999 999 99999


Q ss_pred             hHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCC------------CCHHHHHHHHHHHh-----hC-----hHH
Q 022615          174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP------------GDLDDCLSKLEPLL-----YN-----QEL  231 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~------------~d~~~l~~~i~~ll-----~~-----~~~  231 (294)
                      ++-+-||..|.+.+++-.|...|..    ++.+|+.+..            .|.+++.++|.+.+     ++     |..
T Consensus       494 tsqMka~~nGgL~~sv~DG~~~E~~----~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~  569 (601)
T TIGR02094       494 TSGMKAAMNGVLNLSILDGWWGEGY----DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPAD  569 (601)
T ss_pred             HHHHHHHHcCCceeecccCcccccC----CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHH
Confidence            9999999999999999888877776    4679999984            78999999997654     22     445


Q ss_pred             HHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 022615          232 RETMGQAARQEM-EKYDWRAATRTIRNEQY  260 (294)
Q Consensus       232 ~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~  260 (294)
                      +.++.+++.... ..|||++.+++|.+..|
T Consensus       570 W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy  599 (601)
T TIGR02094       570 WVEMMKESIATIAPRFSTNRMVREYVDKFY  599 (601)
T ss_pred             HHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence            788888887765 57999999999996544

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.60  E-value=6.7e-15  Score=99.85  Aligned_cols=90  Identities=29%  Similarity=0.488  Sum_probs=83.7

Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                      +++.|+..++++.+++|+||||+|+|+++.+++.+++   .++..++.++  |++++.+++..+++|++.++++++++++
T Consensus         1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~---~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~   75 (92)
T PF13524_consen    1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIF---EDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARE   75 (92)
T ss_pred             CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHc---CCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence            4677888899999999999999999999999999999   7788888888  9999999999999999999999999999


Q ss_pred             HHH-hCCHHHHHHHHH
Q 022615          242 EME-KYDWRAATRTIR  256 (294)
Q Consensus       242 ~~~-~~s~~~~~~~~~  256 (294)
                      .+. +|+|+..+++++
T Consensus        76 ~v~~~~t~~~~~~~il   91 (92)
T PF13524_consen   76 RVLKRHTWEHRAEQIL   91 (92)
T ss_pred             HHHHhCCHHHHHHHHH
Confidence            995 699999999986

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.52  E-value=1.7e-12  Score=112.31  Aligned_cols=240  Identities=16%  Similarity=0.201  Sum_probs=145.7

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch----HHHHH--------h----hcC
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----EMRWR--------L----SNG   87 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~----~~~~~--------~----~~~   87 (294)
                      ..+|+.....||.+.++|+-++...+...+..++  .|+|||++.+.+.....-.    ..+.+        +    .+.
T Consensus       212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pD--vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd  289 (633)
T PF05693_consen  212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPD--VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFD  289 (633)
T ss_dssp             HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--S--EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-
T ss_pred             HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCC--EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence            3589999999999999999999999887654332  6779999988776643211    11111        1    111


Q ss_pred             CCCCceEEEeeccc-ccccHHHHHHHHHhCC--------C---cEEEEEcC-----------------------------
Q 022615           88 EPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP--------E---ARIAFIGD-----------------------------  126 (294)
Q Consensus        88 ~~~~~~i~~~G~~~-~~k~~~~l~~~~~~~~--------~---~~l~i~G~-----------------------------  126 (294)
                      .++..+|...||.. ..||++.+++++.++.        +   +.|+|+-.                             
T Consensus       290 ~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~  369 (633)
T PF05693_consen  290 LDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEK  369 (633)
T ss_dssp             GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHH
Confidence            24556788888884 5899999999997661        2   33444321                             


Q ss_pred             -----------C--ccH---------HHHHhh----------------------------hcCC--------C--eEEEe
Q 022615          127 -----------G--PYR---------EELEKM----------------------------FTGM--------P--AVFTG  146 (294)
Q Consensus       127 -----------~--~~~---------~~~~~~----------------------------~~~~--------~--v~~~g  146 (294)
                                 |  ++.         -.++..                            +++.        +  |+|++
T Consensus       370 ~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P  449 (633)
T PF05693_consen  370 IGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHP  449 (633)
T ss_dssp             HHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--
T ss_pred             HHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEee
Confidence                       0  000         000000                            0000        1  44443


Q ss_pred             c-cc------chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCC--CCcceeecC---CCC
Q 022615          147 M-LL------GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ--DGKIGYLFN---PGD  214 (294)
Q Consensus       147 ~-~~------~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~--~~~~g~~~~---~~d  214 (294)
                      . ++      .-+..+++..||+.|+||++|.+|.+.+|+.++|+|.|+|+..|+..++++..  ....|+.+-   ..+
T Consensus       450 ~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n  529 (633)
T PF05693_consen  450 EYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKN  529 (633)
T ss_dssp             S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-
T ss_pred             ccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCC
Confidence            2 22      24788999999999999999999999999999999999999998887774321  123444432   234


Q ss_pred             HHH----HHHHHHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 022615          215 LDD----CLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       215 ~~~----l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      .++    +++.|..+.. ++..+..++.++.+..+..+|+.+...|. ..|+.++.+
T Consensus       530 ~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~-~Ay~~AL~~  585 (633)
T PF05693_consen  530 YDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE-KAYDLALRR  585 (633)
T ss_dssp             HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHh
Confidence            444    4444444444 56677778888888888999999999998 788887765

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.47  E-value=3.3e-11  Score=109.66  Aligned_cols=242  Identities=17%  Similarity=0.122  Sum_probs=177.3

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhcc-------CCcCceEEeeccccCCCCC-CCc---------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARV-------TAANKIRIWKKGVDSESFH-PRF---------------------   75 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~-------~~~~~i~~i~~gvd~~~~~-~~~---------------------   75 (294)
                      .+.+..+..|+.+-++|+-..+..++.+.       ....++.-|.|||+...+. |..                     
T Consensus       343 nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~  422 (778)
T cd04299         343 NMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPEL  422 (778)
T ss_pred             eHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHH
Confidence            67888899999999999877554544331       1134689999999998776 210                     


Q ss_pred             -------cch-------HHHHHh--------------------------hcCCCCCceEEEeecccccccHHHHHHHHHh
Q 022615           76 -------RSS-------EMRWRL--------------------------SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  115 (294)
Q Consensus        76 -------~~~-------~~~~~~--------------------------~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~  115 (294)
                             ...       ..+.++                          ....++.++++++.|+..+|+.++++..+.+
T Consensus       423 ~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~r  502 (778)
T cd04299         423 WEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPER  502 (778)
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHH
Confidence                   010       000000                          0123456689999999999999998887655


Q ss_pred             C--------CCcEEEEEcCCc--c------HHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecC--CCCcc
Q 022615          116 L--------PEARIAFIGDGP--Y------REELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLG  173 (294)
Q Consensus       116 ~--------~~~~l~i~G~~~--~------~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~  173 (294)
                      +        ..++|+|.|.+.  +      .+.+.+..+.    .+|.|+...+-.--..+++.||+.++|+.  .|.+|
T Consensus       503 l~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsG  582 (778)
T cd04299         503 LKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASG  582 (778)
T ss_pred             HHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCc
Confidence            5        358999999753  1      1233333432    25777777666667789999999999999  99999


Q ss_pred             hHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCC------------CCHHHHHHHHHHHhh----C------hHH
Q 022615          174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP------------GDLDDCLSKLEPLLY----N------QEL  231 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~------------~d~~~l~~~i~~ll~----~------~~~  231 (294)
                      ++-+-||..|.+-+++-.|...|..    ++.+||.+..            .|.++|.+.|++-+.    +      |..
T Consensus       583 TSgMKA~~NG~LnlSvlDGww~E~~----~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~  658 (778)
T cd04299         583 TSGMKAALNGGLNLSVLDGWWDEGY----DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPG  658 (778)
T ss_pred             cchHHHHHcCCeeeecccCcccccc----CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHH
Confidence            9999999999999999998888886    5889999987            466667777754322    3      667


Q ss_pred             HHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHh
Q 022615          232 RETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWRKK  270 (294)
Q Consensus       232 ~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~~~~~~~~~  270 (294)
                      +.+|.+++...+ ..|+|++++++|.+.+|.-+....+..
T Consensus       659 W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~~~~~~~  698 (778)
T cd04299         659 WVAMMKHSMATLGPRFSAERMVREYVERFYLPAARRGRRL  698 (778)
T ss_pred             HHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHHHHHHHh
Confidence            888888888776 679999999999999997776554444

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.45  E-value=5.1e-12  Score=108.49  Aligned_cols=222  Identities=16%  Similarity=0.125  Sum_probs=158.6

Q ss_pred             hCCeEEecchhhHHHHHHhc----cC------------CcCceEEeeccccCCCCCCCccc--hHHHHHhhcCCCCCceE
Q 022615           33 AADLTLVPSVAIGKDLEAAR----VT------------AANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLI   94 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~----~~------------~~~~i~~i~~gvd~~~~~~~~~~--~~~~~~~~~~~~~~~~i   94 (294)
                      .+|.|-+.+....+.|.+.-    +.            ..-++.+.|-|||++.|......  ............++.+|
T Consensus       179 ~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~li  258 (474)
T PRK10117        179 DYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNI  258 (474)
T ss_pred             hCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEE
Confidence            78999998888877776521    10            11236778999998876442211  11111122123457789


Q ss_pred             EEeecccccccHHHHHHHHHhC----C----CcEEEEEcCC-----cc----HHHHHhhhcCC----------CeEE-Ee
Q 022615           95 VHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDG-----PY----REELEKMFTGM----------PAVF-TG  146 (294)
Q Consensus        95 ~~~G~~~~~k~~~~l~~~~~~~----~----~~~l~i~G~~-----~~----~~~~~~~~~~~----------~v~~-~g  146 (294)
                      +-+.+++.-||+..=++|++.+    |    ++.|+-+...     +.    ..+++++..+.          .|.+ ..
T Consensus       259 lgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~  338 (474)
T PRK10117        259 FSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ  338 (474)
T ss_pred             EEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecC
Confidence            9999999999998888888665    4    4566655432     12    22333332221          1443 45


Q ss_pred             cccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCC-----CEEeecCCCcccccccCCCCcceeecCCCCHHHHHHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK  221 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-----pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~  221 (294)
                      .++.+++..+|+.||+++..+..+|+.++..|+++|..     ++|.|...|..+.+   .   ..++++|.|.++++++
T Consensus       339 ~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L---~---~AllVNP~d~~~~A~A  412 (474)
T PRK10117        339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAA  412 (474)
T ss_pred             CCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHh---C---CCeEECCCCHHHHHHH
Confidence            67889999999999999999999999999999999975     37889888888877   2   4789999999999999


Q ss_pred             HHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 022615          222 LEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQY  260 (294)
Q Consensus       222 i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~  260 (294)
                      |.+.+. .++++++.-+..++.+.+++....++.+++.+-
T Consensus       413 i~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~  452 (474)
T PRK10117        413 LDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLK  452 (474)
T ss_pred             HHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Confidence            999998 455677777777788888999999998886554

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.40  E-value=2.4e-11  Score=104.19  Aligned_cols=205  Identities=16%  Similarity=0.076  Sum_probs=126.7

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEE-ee-cccc-c
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH-VG-RLGV-E  103 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~G-~~~~-~  103 (294)
                      .+.+.+.+|.+++.++...+.+.+.+ .   ++.+++|++..............+.+... .++.++|+. .| +..+ .
T Consensus       132 ~r~l~~~~d~v~~~~~~e~~~~~~~g-~---~~~~vGnPv~~~~~~~~~~~~~~r~~lgl-~~~~~~Ilvl~GSR~aei~  206 (385)
T TIGR00215       132 AKKIEKATDFLLAILPFEKAFYQKKN-V---PCRFVGHPLLDAIPLYKPDRKSAREKLGI-DHNGETLALLPGSRGSEVE  206 (385)
T ss_pred             HHHHHHHHhHhhccCCCcHHHHHhcC-C---CEEEECCchhhhccccCCCHHHHHHHcCC-CCCCCEEEEECCCCHHHHH
Confidence            67888899999999999999987532 2   56678888743322111122233333333 344555554 44 3344 5


Q ss_pred             ccHHHHHHHHHhC----CCcEEEEE-cCCccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          104 KSLDFLKRVMDRL----PEARIAFI-GDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       104 k~~~~l~~~~~~~----~~~~l~i~-G~~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      ++...++++++.+    |++++++. +.+...+.+++....    ..+.+.+    .++..+|+.||++|++|     |.
T Consensus       207 k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~l~aADl~V~~S-----Gt  277 (385)
T TIGR00215       207 KLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID----GDARKAMFAADAALLAS-----GT  277 (385)
T ss_pred             HhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC----chHHHHHHhCCEEeecC-----CH
Confidence            7788888777654    57777665 444444444444332    2344332    35778999999999999     77


Q ss_pred             HHHHHHhcCCCEEee-cCCCcc----------------cccccCCCCcceeecCCCCHHHHHHHHHHHhhCh----HHHH
Q 022615          175 VVLEAMSSGIPVVGV-RAGGIP----------------DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ----ELRE  233 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~-~~~~~~----------------e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~----~~~~  233 (294)
                      ..+|++++|+|+|.. ....+.                .++.. +....-++-...+++.+++.+.+++.|+    +.++
T Consensus       278 ~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~  356 (385)
T TIGR00215       278 AALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMH  356 (385)
T ss_pred             HHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHH
Confidence            778999999998876 222222                11200 0001111223457899999999999998    8777


Q ss_pred             HHHHHHHHHHHhC
Q 022615          234 TMGQAARQEMEKY  246 (294)
Q Consensus       234 ~~~~~~~~~~~~~  246 (294)
                      ++.+...+..+..
T Consensus       357 ~~~~~~~~~~~~l  369 (385)
T TIGR00215       357 RERQFFEELRQRI  369 (385)
T ss_pred             HHHHHHHHHHHHh
Confidence            7776665554443

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.36  E-value=1.1e-11  Score=107.64  Aligned_cols=222  Identities=21%  Similarity=0.274  Sum_probs=135.4

Q ss_pred             hCCeEEecchhhHHHHHHh----ccC--C-----------cCceEEeeccccCCCCCCCccc---hHHHHHhhcCCCC-C
Q 022615           33 AADLTLVPSVAIGKDLEAA----RVT--A-----------ANKIRIWKKGVDSESFHPRFRS---SEMRWRLSNGEPD-K   91 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~----~~~--~-----------~~~i~~i~~gvd~~~~~~~~~~---~~~~~~~~~~~~~-~   91 (294)
                      .||.|-+.+....+.|...    .+.  .           .-++.+.|-|||++.+......   ............+ .
T Consensus       197 ~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~  276 (474)
T PF00982_consen  197 GADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKR  276 (474)
T ss_dssp             TSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-S
T ss_pred             cCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCc
Confidence            7999999998888777543    211  1           1136778889998776432111   1111111112234 5


Q ss_pred             ceEEEeecccccccHHHHHHHHHhC----C----CcEEEEEcCC-----c----cHHHHHhhhcCC----------CeE-
Q 022615           92 PLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDG-----P----YREELEKMFTGM----------PAV-  143 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~~~~~~----~----~~~l~i~G~~-----~----~~~~~~~~~~~~----------~v~-  143 (294)
                      .+|+-+.+++..||+..=+.|++++    |    ++.|+-++..     +    ..+++.++..+.          .|. 
T Consensus       277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~  356 (474)
T PF00982_consen  277 KIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIY  356 (474)
T ss_dssp             EEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEE
T ss_pred             EEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEE
Confidence            8899999999999998888888655    4    4666655521     1    122333332211          244 


Q ss_pred             EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCC----EEeecCCCcccccccCCCCcceeecCCCCHHHHH
Q 022615          144 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL  219 (294)
Q Consensus       144 ~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~p----vI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~  219 (294)
                      +.+.++.+++..+|+.||+++.++..+|+.+...|+++|...    +|.|...|..+.+     ....+.++|.|.++++
T Consensus       357 ~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-----~~~al~VNP~d~~~~A  431 (474)
T PF00982_consen  357 IYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-----SEAALLVNPWDIEEVA  431 (474)
T ss_dssp             E-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT------TTS-EEE-TT-HHHHH
T ss_pred             EecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc-----CCccEEECCCChHHHH
Confidence            445688999999999999999999999999999999999765    7888888888777     3345899999999999


Q ss_pred             HHHHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 022615          220 SKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQ  259 (294)
Q Consensus       220 ~~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l  259 (294)
                      ++|.+.+. .+++++..-+..++.+.+++....++.+++.+
T Consensus       432 ~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L  472 (474)
T PF00982_consen  432 DAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL  472 (474)
T ss_dssp             HHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence            99999998 55677777777888888999999998888655

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=1.5e-10  Score=99.22  Aligned_cols=224  Identities=18%  Similarity=0.212  Sum_probs=160.6

Q ss_pred             HhCCeEEecchhhHHHHHHhcc-----------------CCcCceEEeeccccCCCCCCCccchH----HHHHhhcCCCC
Q 022615           32 RAADLTLVPSVAIGKDLEAARV-----------------TAANKIRIWKKGVDSESFHPRFRSSE----MRWRLSNGEPD   90 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~~~-----------------~~~~~i~~i~~gvd~~~~~~~~~~~~----~~~~~~~~~~~   90 (294)
                      -.+|.|-+.++..++.|...-.                 ....++..+|-|+|+..+........    .+.-......+
T Consensus       202 l~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~  281 (486)
T COG0380         202 LGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRN  281 (486)
T ss_pred             hcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCC
Confidence            3789999999888877755321                 11135678899999987754332211    11111112334


Q ss_pred             CceEEEeecccccccHHHHHHHHHhC----C----CcEEEEEcCCc---------cHHHHHhhhcCC----------CeE
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGP---------YREELEKMFTGM----------PAV  143 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~----~----~~~l~i~G~~~---------~~~~~~~~~~~~----------~v~  143 (294)
                      +.+|+.+.|++.-||+..=+.+++++    |    ++.++-++..+         ....++....+.          .|.
T Consensus       282 ~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~  361 (486)
T COG0380         282 KKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVH  361 (486)
T ss_pred             ceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeE
Confidence            78899999999999988877777665    3    45665555321         112222222211          244


Q ss_pred             -EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC----CCEEeecCCCcccccccCCCCcceeecCCCCHHHH
Q 022615          144 -FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  218 (294)
Q Consensus       144 -~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l  218 (294)
                       +...++.+++..+|+.||+++..+..+|+.++..|+.+|-    -+.|.|...|....+   .   ..++++|.|.+++
T Consensus       362 ~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L---~---~AliVNP~d~~~v  435 (486)
T COG0380         362 YLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL---R---DALIVNPWDTKEV  435 (486)
T ss_pred             EEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh---c---cCEeECCCChHHH
Confidence             4455888999999999999999999999999999999985    478888888877777   2   2789999999999


Q ss_pred             HHHHHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022615          219 LSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       219 ~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      +++|.+.++ .++++++.-+..++.+.+++....++.+++.+.+
T Consensus       436 a~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~  479 (486)
T COG0380         436 ADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            999999998 5667777777777888889999999988876665

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.26  E-value=2.4e-10  Score=105.94  Aligned_cols=225  Identities=15%  Similarity=0.157  Sum_probs=158.6

Q ss_pred             HhCCeEEecchhhHHHHHHh----ccC---------------CcCceEEeeccccCCCCCCCccchH---HHHHh--hcC
Q 022615           32 RAADLTLVPSVAIGKDLEAA----RVT---------------AANKIRIWKKGVDSESFHPRFRSSE---MRWRL--SNG   87 (294)
Q Consensus        32 ~~ad~ii~~s~~~~~~~~~~----~~~---------------~~~~i~~i~~gvd~~~~~~~~~~~~---~~~~~--~~~   87 (294)
                      -.||.|-+.+...++.|.+.    .+.               ..-++.+.|-|||+..+.......+   .....  ...
T Consensus       256 L~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~  335 (854)
T PLN02205        256 LNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFC  335 (854)
T ss_pred             hcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhc
Confidence            37999999998888777661    111               1123667899999887744322111   11111  111


Q ss_pred             CCCCceEEEeecccccccHHHHHHHHHhC----CC----cEEEEEcC-----CccHHHHH----hhhcCC----------
Q 022615           88 EPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE----ARIAFIGD-----GPYREELE----KMFTGM----------  140 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~----~~l~i~G~-----~~~~~~~~----~~~~~~----------  140 (294)
                      .+++.+|+-+.+++.-||+..=+.|++++    |+    +.|+-+..     +...+.++    +...+.          
T Consensus       336 ~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~  415 (854)
T PLN02205        336 DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYD  415 (854)
T ss_pred             cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCc
Confidence            23577899999999999998888888665    43    45554442     22222222    222211          


Q ss_pred             CeEEE-ecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCC-------------------CEEeecCCCccccccc
Q 022615          141 PAVFT-GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI-------------------PVVGVRAGGIPDIIPE  200 (294)
Q Consensus       141 ~v~~~-g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-------------------pvI~~~~~~~~e~~~~  200 (294)
                      .|.+. ..++.+++..+|+.||+++..+..+|+.++..||++|..                   .+|.|...|....+  
T Consensus       416 Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L--  493 (854)
T PLN02205        416 PIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL--  493 (854)
T ss_pred             eEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh--
Confidence            25544 668889999999999999999999999999999999864                   36777777766666  


Q ss_pred             CCCCcceeecCCCCHHHHHHHHHHHhhC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 022615          201 DQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       201 ~~~~~~g~~~~~~d~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~  262 (294)
                          ...+.++|.|.++++++|.+.+.- +++++..-+..++.+.+++....++.+++.+.+.
T Consensus       494 ----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~  552 (854)
T PLN02205        494 ----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT  552 (854)
T ss_pred             ----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence                237899999999999999999984 4566666667778888899999999998776554

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.22  E-value=2e-09  Score=89.71  Aligned_cols=213  Identities=18%  Similarity=0.203  Sum_probs=141.8

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCCCCCCCccchHHHHHhhcCCCC-CceEEEee
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVG   98 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G   98 (294)
                      +..+.+.+.+++..|.|++.|+..++.+.+.+. +  ++.+..|- +|.+   +................. +.+++..+
T Consensus       165 ~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa-~--~v~v~GNlKfd~~---~~~~~~~~~~~~r~~l~~~r~v~iaaS  238 (419)
T COG1519         165 AKLKFLARLLFKNIDLILAQSEEDAQRFRSLGA-K--PVVVTGNLKFDIE---PPPQLAAELAALRRQLGGHRPVWVAAS  238 (419)
T ss_pred             HHHHHHHHHHHHhcceeeecCHHHHHHHHhcCC-c--ceEEecceeecCC---CChhhHHHHHHHHHhcCCCCceEEEec
Confidence            345578999999999999999999999999763 2  36666652 2221   111111111111111122 67777777


Q ss_pred             cccccccHHHHHHHH----HhCCCcEEEEEcCCccH-HHHHhhhcCCC-----------------eEEEecccchhHHHH
Q 022615           99 RLGVEKSLDFLKRVM----DRLPEARIAFIGDGPYR-EELEKMFTGMP-----------------AVFTGMLLGEELSQA  156 (294)
Q Consensus        99 ~~~~~k~~~~l~~~~----~~~~~~~l~i~G~~~~~-~~~~~~~~~~~-----------------v~~~g~~~~~~~~~~  156 (294)
                      ....+  -+.+++++    +..|+..++++-..+++ +.++++++..+                 |.+.+.+  .||..+
T Consensus       239 TH~GE--eei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~  314 (419)
T COG1519         239 THEGE--EEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLL  314 (419)
T ss_pred             CCCch--HHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHH
Confidence            63222  33345555    45578999999887765 45555555432                 4444444  789999


Q ss_pred             HhcCCEEEee-cCCCCcchHHHHHHhcCCCEEeecC-CCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHH
Q 022615          157 YASGDVFVMP-SESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       157 ~~~ad~~l~p-s~~e~~~~~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                      |+.||+.+.. |...-.|..++|+.++|+|||..+. -...++.+.-...+.++.++  |.+.+.+.+..+++|++.+++
T Consensus       315 y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~  392 (419)
T COG1519         315 YGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREA  392 (419)
T ss_pred             HhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHH
Confidence            9999988775 5556778899999999999998643 23333332224555666666  677888888888888999999


Q ss_pred             HHHHHHHHHHh
Q 022615          235 MGQAARQEMEK  245 (294)
Q Consensus       235 ~~~~~~~~~~~  245 (294)
                      +++++...+.+
T Consensus       393 ~~~~~~~~v~~  403 (419)
T COG1519         393 YGRAGLEFLAQ  403 (419)
T ss_pred             HHHHHHHHHHH
Confidence            99999998754

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.21  E-value=2.1e-09  Score=90.29  Aligned_cols=211  Identities=16%  Similarity=0.183  Sum_probs=140.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeec-cccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-LGVE  103 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-~~~~  103 (294)
                      ...+++.+.++.|.+.-+.    . ..+ .+++++.+..+++..+... ... ...+.  .... ++++|+.+|. .+-.
T Consensus       128 ~ank~~~~~a~~V~~~f~~----~-~~~-~~~~~~~~tG~Pvr~~~~~-~~~-~~~~~--~~~~-~~~~ilV~GGS~Ga~  196 (357)
T COG0707         128 LANKILSKFAKKVASAFPK----L-EAG-VKPENVVVTGIPVRPEFEE-LPA-AEVRK--DGRL-DKKTILVTGGSQGAK  196 (357)
T ss_pred             hhHHHhHHhhceeeecccc----c-ccc-CCCCceEEecCcccHHhhc-cch-hhhhh--hccC-CCcEEEEECCcchhH
Confidence            4677788888888876655    1 112 3456788999988877664 111 11111  1111 5555555554 4544


Q ss_pred             ccHHHHHHHHHhCCC-cEEE-EEcCCccHHHHHhhhcCCC-eEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHH
Q 022615          104 KSLDFLKRVMDRLPE-ARIA-FIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM  180 (294)
Q Consensus       104 k~~~~l~~~~~~~~~-~~l~-i~G~~~~~~~~~~~~~~~~-v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~  180 (294)
                      .--+.+.++...+.+ ++++ .+|.+. .+.+.......+ +.+.++.  ++|..+|+.||++|+-+    .++++.|..
T Consensus       197 ~ln~~v~~~~~~l~~~~~v~~~~G~~~-~~~~~~~~~~~~~~~v~~f~--~dm~~~~~~ADLvIsRa----Ga~Ti~E~~  269 (357)
T COG0707         197 ALNDLVPEALAKLANRIQVIHQTGKND-LEELKSAYNELGVVRVLPFI--DDMAALLAAADLVISRA----GALTIAELL  269 (357)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEcCcch-HHHHHHHHhhcCcEEEeeHH--hhHHHHHHhccEEEeCC----cccHHHHHH
Confidence            444555566666664 6654 445554 555555555555 7888888  89999999999999765    368999999


Q ss_pred             hcCCCEEeecCCCc--------ccccccCCCCcceeecCCCC--HHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHH
Q 022615          181 SSGIPVVGVRAGGI--------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  250 (294)
Q Consensus       181 a~G~pvI~~~~~~~--------~e~~~~~~~~~~g~~~~~~d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~  250 (294)
                      ++|+|+|.-+.+..        ..++   .+.+.+.+++..+  ++.+.+.|.+++++++..++|.++++.....-.-+.
T Consensus       270 a~g~P~IliP~p~~~~~~Q~~NA~~l---~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~  346 (357)
T COG0707         270 ALGVPAILVPYPPGADGHQEYNAKFL---EKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAER  346 (357)
T ss_pred             HhCCCEEEeCCCCCccchHHHHHHHH---HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence            99999987655433        2233   4455666666554  889999999999999999999999988765554555


Q ss_pred             HHHHHH
Q 022615          251 ATRTIR  256 (294)
Q Consensus       251 ~~~~~~  256 (294)
                      +++.+.
T Consensus       347 i~~~~~  352 (357)
T COG0707         347 IADLLL  352 (357)
T ss_pred             HHHHHH
Confidence            544443

>TIGR03492 conserved hypothetical protein

Probab=99.12  E-value=8.3e-09  Score=88.73  Aligned_cols=208  Identities=13%  Similarity=0.069  Sum_probs=133.2

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc--cc
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EK  104 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k  104 (294)
                      .+...+.|+.+++..+...+.+.+.+    .++.++.|.+-....... . .      ....+...+++..|.-+.  .+
T Consensus       154 n~l~~~~a~~v~~~~~~t~~~l~~~g----~k~~~vGnPv~d~l~~~~-~-~------~l~~~~~~lllLpGSR~ae~~~  221 (396)
T TIGR03492       154 WLMRSRRCLAVFVRDRLTARDLRRQG----VRASYLGNPMMDGLEPPE-R-K------PLLTGRFRIALLPGSRPPEAYR  221 (396)
T ss_pred             HHhhchhhCEEeCCCHHHHHHHHHCC----CeEEEeCcCHHhcCcccc-c-c------ccCCCCCEEEEECCCCHHHHHc
Confidence            45666899999999999999998743    278889988744432211 1 0      111223344555665423  34


Q ss_pred             cHHHHHHHHHhC---CCcEEEEEc-CCccHHHHHhhhcCCC------------------eEEEecccchhHHHHHhcCCE
Q 022615          105 SLDFLKRVMDRL---PEARIAFIG-DGPYREELEKMFTGMP------------------AVFTGMLLGEELSQAYASGDV  162 (294)
Q Consensus       105 ~~~~l~~~~~~~---~~~~l~i~G-~~~~~~~~~~~~~~~~------------------v~~~g~~~~~~~~~~~~~ad~  162 (294)
                      ++..++++++.+   +++.+++.- .+...+.+++.....+                  +.+..+.  +++.++|+.||+
T Consensus       222 ~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADl  299 (396)
T TIGR03492       222 NLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADL  299 (396)
T ss_pred             cHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCE
Confidence            566888888777   567776543 3444555555443222                  4445554  789999999999


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEeecCCCc---ccccccCCC----CcceeecCCCCHHHHHHHHHHHhhChHHHHHH
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGVRAGGI---PDIIPEDQD----GKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~---~e~~~~~~~----~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      +|..|     |....|++++|+|+|....++.   ..++   +.    ...+..+...+++.+++.+..+++|++.++++
T Consensus       300 vI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~---~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~~~~~~  371 (396)
T TIGR03492       300 GIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFA---EAQSRLLGGSVFLASKNPEQAAQVVRQLLADPELLERC  371 (396)
T ss_pred             EEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHH---HhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence            99886     5677999999999998764322   1222   11    02344445567899999999999999888787


Q ss_pred             HHHHHHHH-HhCCHHHHHHHHH
Q 022615          236 GQAARQEM-EKYDWRAATRTIR  256 (294)
Q Consensus       236 ~~~~~~~~-~~~s~~~~~~~~~  256 (294)
                      .+++.+.. +....+.+++.+.
T Consensus       372 ~~~~~~~lg~~~a~~~ia~~i~  393 (396)
T TIGR03492       372 RRNGQERMGPPGASARIAESIL  393 (396)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHH
Confidence            75444443 3345555554443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.93  E-value=2.3e-08  Score=82.10  Aligned_cols=208  Identities=16%  Similarity=0.150  Sum_probs=150.0

Q ss_pred             hCCeEEecchhh-HHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHHHH
Q 022615           33 AADLTLVPSVAI-GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  111 (294)
Q Consensus        33 ~ad~ii~~s~~~-~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~  111 (294)
                      -.|.|++.++.. ++.+.+.++  ..++..++.++|.+.+.+.+...          ...--+.++|+..++ ..+.+-+
T Consensus       138 ~fd~v~~~g~~l~~~~yyq~~~--~~~~~~~~~a~d~~~~~~i~~da----------~~~~dL~~ign~~pD-r~e~~ke  204 (373)
T COG4641         138 IFDNVLSFGGGLVANKYYQEGG--ARNCYYLPWAVDDSLFHPIPPDA----------SYDVDLNLIGNPYPD-RVEEIKE  204 (373)
T ss_pred             hhhhhhhccchHHHHHHHHhhc--ccceeccCccCCchhcccCCccc----------cceeeeEEecCCCcc-HHHHHHH
Confidence            345566666666 555554443  34789999999999998864321          123358899988776 3344444


Q ss_pred             HHHh----CC-CcEEEEEcCCccHHHHHhhhcCCCeEEEecccc-hhHHHHHhcCCEEEeecCC---C-C--cchHHHHH
Q 022615          112 VMDR----LP-EARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSES---E-T--LGLVVLEA  179 (294)
Q Consensus       112 ~~~~----~~-~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~ad~~l~ps~~---e-~--~~~~~~Ea  179 (294)
                      ++..    +. +-.+...|.. +...+.......++.+.|+++. +.+...++..|+.+.-++.   + +  +.+.++|+
T Consensus       205 ~~~~ps~kl~v~rr~~~~g~~-y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFei  283 (373)
T COG4641         205 FFVEPSFKLMVDRRFYVLGPR-YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEI  283 (373)
T ss_pred             HhhccchhhhccceeeecCCc-cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHH
Confidence            4421    11 2455566654 2223333333447888888877 8999999999999886542   2 2  37889999


Q ss_pred             HhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHH
Q 022615          180 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNE  258 (294)
Q Consensus       180 ~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~  258 (294)
                      ++||.|.|++...++..++   .+|+.-++..  |..++.+++..++..+++++++++.+++.+ ..|+.+.-+.++++.
T Consensus       284 agc~~~liT~~~~~~e~~f---~pgk~~iv~~--d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~  358 (373)
T COG4641         284 AGCGGFLITDYWKDLEKFF---KPGKDIIVYQ--DSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNE  358 (373)
T ss_pred             hhcCCccccccHHHHHHhc---CCchheEEec--CHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHH
Confidence            9999999999999898899   7787777766  999999999999999999999999999998 459999888888843


Q ss_pred             H
Q 022615          259 Q  259 (294)
Q Consensus       259 l  259 (294)
                      +
T Consensus       359 i  359 (373)
T COG4641         359 I  359 (373)
T ss_pred             H
Confidence            3

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=98.86  E-value=1.8e-07  Score=79.74  Aligned_cols=212  Identities=13%  Similarity=0.108  Sum_probs=126.4

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCCCCCCCccchHHHHHhhcCCCCCceEEEeec-----c
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----L  100 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-----~  100 (294)
                      .+.+-+.++..+++++..++.+.+.+ .+++++.++.|. +|.-.............+.+...+++.+++.+-+     .
T Consensus       138 r~~i~~la~l~f~~t~~~~~~L~~eg-~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~  216 (365)
T TIGR03568       138 RHAITKLSHLHFVATEEYRQRVIQMG-EDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKE  216 (365)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHcC-CCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCccccc
Confidence            34445667899999999999998855 556788888774 4432221111222333333322223443333322     2


Q ss_pred             cccccHHHHHHHHHhCC-CcEEEEEc-CCc----cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcc
Q 022615          101 GVEKSLDFLKRVMDRLP-EARIAFIG-DGP----YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  173 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~~-~~~l~i~G-~~~----~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~  173 (294)
                      .....+..+++++..+. ++ +++.- .++    ..+.+.++.. ..++.+.+.++..++..+++.|++++.-|     +
T Consensus       217 ~~~~~l~~li~~L~~~~~~~-~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdS-----S  290 (365)
T TIGR03568       217 SAEEQIKELLKALDELNKNY-IFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNS-----S  290 (365)
T ss_pred             CchHHHHHHHHHHHHhccCC-EEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcC-----h
Confidence            22334666777776653 34 22321 112    1334455443 45799999999999999999999999544     2


Q ss_pred             hHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHH
Q 022615          174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  253 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~  253 (294)
                      ..+.||.++|+|+|+-  +.-++.+   +.+.+++.+ ..|.+++.+++.++ .+++.+..+.    .....|..-+.++
T Consensus       291 ggi~EA~~lg~Pvv~l--~~R~e~~---~~g~nvl~v-g~~~~~I~~a~~~~-~~~~~~~~~~----~~~~pygdg~as~  359 (365)
T TIGR03568       291 SGIIEAPSFGVPTINI--GTRQKGR---LRADSVIDV-DPDKEEIVKAIEKL-LDPAFKKSLK----NVKNPYGDGNSSE  359 (365)
T ss_pred             hHHHhhhhcCCCEEee--cCCchhh---hhcCeEEEe-CCCHHHHHHHHHHH-hChHHHHHHh----hCCCCCCCChHHH
Confidence            3448999999999954  4566666   567777756 45889999999995 4443222221    1112355555555


Q ss_pred             HHH
Q 022615          254 TIR  256 (294)
Q Consensus       254 ~~~  256 (294)
                      ++.
T Consensus       360 rI~  362 (365)
T TIGR03568       360 RII  362 (365)
T ss_pred             HHH
Confidence            554

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=98.80  E-value=6.1e-07  Score=76.13  Aligned_cols=191  Identities=17%  Similarity=0.143  Sum_probs=111.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      ...+.+.+.++.+++.-+...+.+      +.+++.+..+++........  ....+..... .+++++++.+|.-...+
T Consensus       128 ~~nr~~~~~a~~v~~~f~~~~~~~------~~~k~~~tG~Pvr~~~~~~~--~~~~~~~~~l-~~~~~~iLv~GGS~Ga~  198 (352)
T PRK12446        128 LANKIALRFASKIFVTFEEAAKHL------PKEKVIYTGSPVREEVLKGN--REKGLAFLGF-SRKKPVITIMGGSLGAK  198 (352)
T ss_pred             HHHHHHHHhhCEEEEEccchhhhC------CCCCeEEECCcCCccccccc--chHHHHhcCC-CCCCcEEEEECCccchH
Confidence            456788889999987654433222      34678888888876654321  2222222322 33455555555443344


Q ss_pred             cH-HHHHHHHHhC-CCcEEE-EEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          105 SL-DFLKRVMDRL-PEARIA-FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       105 ~~-~~l~~~~~~~-~~~~l~-i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      .+ +.+.+++..+ .+++++ ++|.....+.... .  .++...+++ .+++.++|+.||++|.-+    .++++.|+++
T Consensus       199 ~in~~~~~~l~~l~~~~~vv~~~G~~~~~~~~~~-~--~~~~~~~f~-~~~m~~~~~~adlvIsr~----G~~t~~E~~~  270 (352)
T PRK12446        199 KINETVREALPELLLKYQIVHLCGKGNLDDSLQN-K--EGYRQFEYV-HGELPDILAITDFVISRA----GSNAIFEFLT  270 (352)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCchHHHHHhh-c--CCcEEecch-hhhHHHHHHhCCEEEECC----ChhHHHHHHH
Confidence            44 4455556555 356654 4565432222222 1  244445654 257999999999998653    3788999999


Q ss_pred             cCCCEEeecCCC----cccccccC--CCCcceeecC--CCCHHHHHHHHHHHhhChHHH
Q 022615          182 SGIPVVGVRAGG----IPDIIPED--QDGKIGYLFN--PGDLDDCLSKLEPLLYNQELR  232 (294)
Q Consensus       182 ~G~pvI~~~~~~----~~e~~~~~--~~~~~g~~~~--~~d~~~l~~~i~~ll~~~~~~  232 (294)
                      +|+|.|..+...    ..+..+..  .+.+.+..+.  .-+++.+.+.+..++.|++.+
T Consensus       271 ~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~  329 (352)
T PRK12446        271 LQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKY  329 (352)
T ss_pred             cCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHH
Confidence            999999875431    11221100  2334444443  235789999999999887654

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.78  E-value=3.2e-07  Score=78.67  Aligned_cols=222  Identities=13%  Similarity=0.103  Sum_probs=110.1

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccc-hHHHHHhhcCCCCCceEEEeecccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS-SEMRWRLSNGEPDKPLIVHVGRLGVEK  104 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~G~~~~~k  104 (294)
                      .........|.+++.|+...+.+.+.++.+.+++.+.+.+-....+...... ....... ....++.+|+|+-+++...
T Consensus       127 ~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~-~~~~~~k~ILyaPT~R~~~  205 (369)
T PF04464_consen  127 NYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKL-GIDKDKKVILYAPTWRDNS  205 (369)
T ss_dssp             HHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHT-T--SS-EEEEEE----GGG
T ss_pred             hhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHh-ccCCCCcEEEEeecccccc
Confidence            4455778899999999999999999988877777665443222222222221 1222222 2344566899997764433


Q ss_pred             cH------------HHHHHHHHhCCCcEEEEEcCCccHHHHHh-hhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCC
Q 022615          105 SL------------DFLKRVMDRLPEARIAFIGDGPYREELEK-MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus       105 ~~------------~~l~~~~~~~~~~~l~i~G~~~~~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      ..            +.+.  ...-+++.+++-........... .....++.....-  +++.+++..||++|.-.    
T Consensus       206 ~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLITDy----  277 (369)
T PF04464_consen  206 SNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILITDY----  277 (369)
T ss_dssp             --GGSS----TT-HHHHH--HHHTTTEEEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEESS----
T ss_pred             ccccccccccccCHHHHH--HHhCCCcEEEEEeCchhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEEEec----
Confidence            32            2222  22235777777664322222222 1123355554433  68999999999998543    


Q ss_pred             cchHHHHHHhcCCCEEee--cCCCc---ccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhC
Q 022615          172 LGLVVLEAMSSGIPVVGV--RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY  246 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~--~~~~~---~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  246 (294)
                       +..++|++.+|+|||..  |....   +.+..+..+...|..+.  +.+++.++|..++.++....+..+...+..-.|
T Consensus       278 -SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~  354 (369)
T PF04464_consen  278 -SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKY  354 (369)
T ss_dssp             --THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT
T ss_pred             -hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCC
Confidence             67899999999999954  33211   11111112233444554  899999999998876655443333333333223


Q ss_pred             CHHHHHHHHHHHH
Q 022615          247 DWRAATRTIRNEQ  259 (294)
Q Consensus       247 s~~~~~~~~~~~l  259 (294)
                      .-.+.++++.+.|
T Consensus       355 ~Dg~s~eri~~~I  367 (369)
T PF04464_consen  355 NDGNSSERIVNYI  367 (369)
T ss_dssp             --S-HHHHHHHHH
T ss_pred             CCchHHHHHHHHH
Confidence            3345555555444

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=98.75  E-value=6e-07  Score=77.37  Aligned_cols=172  Identities=16%  Similarity=0.228  Sum_probs=106.2

Q ss_pred             CCCCceEEEeeccccc--ccHHHHHHHHHhCCCcEEEEEcCCc-cHHHHHhhhcCC-----CeEEEecccchhHHHHHhc
Q 022615           88 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFTGM-----PAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~-----~v~~~g~~~~~~~~~~~~~  159 (294)
                      +++.++++.+.++.+.  .-++...++++..|+.+|++...+. ..+.+.+.....     ++.|.+..+.++....++.
T Consensus       282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~  361 (468)
T PF13844_consen  282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQL  361 (468)
T ss_dssp             -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG
T ss_pred             CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhh
Confidence            4455566666665332  2355667777888999998875433 234444444332     4889999888899999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC---CCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~---~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      +|++|-+. .-+.+++.+||+.+|+|||+-....+..-+...   .-|-..++..  |.++..+....+..|++.+++++
T Consensus       362 ~DI~LDT~-p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s~~eYv~~Av~La~D~~~l~~lR  438 (468)
T PF13844_consen  362 ADICLDTF-PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--SEEEYVEIAVRLATDPERLRALR  438 (468)
T ss_dssp             -SEEE--S-SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--SHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CCEEeeCC-CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--CHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999763 345578899999999999987644332222000   0122334444  88999999999999999999999


Q ss_pred             HHHHHHH-H--hCCHHHHHHHHHHHHHHHH
Q 022615          237 QAARQEM-E--KYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       237 ~~~~~~~-~--~~s~~~~~~~~~~~l~~~~  263 (294)
                      ++.++.. .  -|+-...++.+. ..|+++
T Consensus       439 ~~Lr~~~~~SpLfd~~~~ar~lE-~a~~~m  467 (468)
T PF13844_consen  439 AKLRDRRSKSPLFDPKRFARNLE-AAYRQM  467 (468)
T ss_dssp             HHHHHHHHHSGGG-HHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHhhCCCCCHHHHHHHHH-HHHHHh
Confidence            9888765 2  289999999998 777764

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=98.71  E-value=3.7e-07  Score=74.89  Aligned_cols=95  Identities=16%  Similarity=0.216  Sum_probs=73.0

Q ss_pred             CceEEEeecccccccHHHHHHHHHhC-CCcEE-EEEcCC-ccHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEee
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRL-PEARI-AFIGDG-PYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~-~~~~l-~i~G~~-~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      ..+++.+|..++.+....+++++... +++++ +++|.+ +..+.+++.... .++.+.+++  +++.++|..||++|..
T Consensus       171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~--~~m~~lm~~aDl~Is~  248 (279)
T TIGR03590       171 RRVLVSFGGADPDNLTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDV--ENMAELMNEADLAIGA  248 (279)
T ss_pred             CeEEEEeCCcCCcCHHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCH--HHHHHHHHHCCEEEEC
Confidence            45788999888877677888888766 34554 356765 455666666543 478899988  8999999999999985


Q ss_pred             cCCCCcchHHHHHHhcCCCEEeecCC
Q 022615          167 SESETLGLVVLEAMSSGIPVVGVRAG  192 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~pvI~~~~~  192 (294)
                      .     |.+++|++++|+|+|+....
T Consensus       249 ~-----G~T~~E~~a~g~P~i~i~~~  269 (279)
T TIGR03590       249 A-----GSTSWERCCLGLPSLAICLA  269 (279)
T ss_pred             C-----chHHHHHHHcCCCEEEEEec
Confidence            3     68899999999999986554

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.70  E-value=7.5e-07  Score=75.22  Aligned_cols=209  Identities=18%  Similarity=0.199  Sum_probs=126.3

Q ss_pred             eeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCC
Q 022615            9 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE   88 (294)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~   88 (294)
                      +|++..-|.|..+.    .+.+-+.+|.+++.=....+.+.+.+ .   ++..+.|+.-.. ..+.......+... ...
T Consensus       113 yYI~PqvWAWr~~R----~~~i~~~~D~ll~ifPFE~~~y~~~g-~---~~~~VGHPl~d~-~~~~~~~~~~~~~~-l~~  182 (373)
T PF02684_consen  113 YYISPQVWAWRPGR----AKKIKKYVDHLLVIFPFEPEFYKKHG-V---PVTYVGHPLLDE-VKPEPDRAEAREKL-LDP  182 (373)
T ss_pred             EEECCceeeeCccH----HHHHHHHHhheeECCcccHHHHhccC-C---CeEEECCcchhh-hccCCCHHHHHHhc-CCC
Confidence            44555455554443    45566788999999999999999865 3   578888875222 22222222333333 334


Q ss_pred             CCCceEEEeeccc-c-cccHHHHHHHHHhC----CCcEEEEEcCCccHHH-HHhhhcCC--CeEEEecccchhHHHHHhc
Q 022615           89 PDKPLIVHVGRLG-V-EKSLDFLKRVMDRL----PEARIAFIGDGPYREE-LEKMFTGM--PAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        89 ~~~~~i~~~G~~~-~-~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~-~~~~~~~~--~v~~~g~~~~~~~~~~~~~  159 (294)
                      ++..+.+..|+-. . .+.+..++++++.+    |++++++......... +.+.....  ++.+.  +...+-.++|+.
T Consensus       183 ~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~m~~  260 (373)
T PF02684_consen  183 DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIV--IIEGESYDAMAA  260 (373)
T ss_pred             CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEE--EcCCchHHHHHh
Confidence            4455667777542 2 34456677776554    7888888765443333 33433322  22222  223678889999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEe-ecCCCccccccc---------------CCCCcceeecCCCCHHHHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVG-VRAGGIPDIIPE---------------DQDGKIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~-~~~~~~~e~~~~---------------~~~~~~g~~~~~~d~~~l~~~i~  223 (294)
                      ||+.+..|     |+..+|++.+|+|.|+ .....+..++..               ++.-..-++-+..+++.+++++.
T Consensus       261 ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~  335 (373)
T PF02684_consen  261 ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELL  335 (373)
T ss_pred             CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHH
Confidence            99999888     9999999999999765 333322222200               00111112334558899999999


Q ss_pred             HHhhChHHHHH
Q 022615          224 PLLYNQELRET  234 (294)
Q Consensus       224 ~ll~~~~~~~~  234 (294)
                      .++.|++.++.
T Consensus       336 ~ll~~~~~~~~  346 (373)
T PF02684_consen  336 ELLENPEKRKK  346 (373)
T ss_pred             HHhcCHHHHHH
Confidence            99988775433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=98.68  E-value=8.4e-07  Score=76.73  Aligned_cols=155  Identities=15%  Similarity=0.148  Sum_probs=96.3

Q ss_pred             CCceEEEeecccccc--cHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           90 DKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k--~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      +..+++..|+.....  -+..+++++...+...++..|.+.....+...  ..++.+.+++++.   +++..||++|..+
T Consensus       225 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~--~~~v~~~~~~p~~---~ll~~~~~~I~hg  299 (392)
T TIGR01426       225 RPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGEL--PPNVEVRQWVPQL---EILKKADAFITHG  299 (392)
T ss_pred             CCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccC--CCCeEEeCCCCHH---HHHhhCCEEEECC
Confidence            345677778753322  34556667766653344456765444333322  3478889998754   6789999998644


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCCc----ccccccCCCCcceeecCC--CCHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~~~~~~~~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                          ...++.|++++|+|+|+.....-    ...+   ...+.|..+..  -+.+++.++|.+++.|++.++.+.+-+..
T Consensus       300 ----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l---~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~  372 (392)
T TIGR01426       300 ----GMNSTMEALFNGVPMVAVPQGADQPMTARRI---AELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAE  372 (392)
T ss_pred             ----CchHHHHHHHhCCCEEecCCcccHHHHHHHH---HHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence                24578999999999998654322    2223   33455655543  35789999999999998755554443333


Q ss_pred             HHHhCCHHHHHHHHH
Q 022615          242 EMEKYDWRAATRTIR  256 (294)
Q Consensus       242 ~~~~~s~~~~~~~~~  256 (294)
                      ....-..+..++.+.
T Consensus       373 ~~~~~~~~~aa~~i~  387 (392)
T TIGR01426       373 IREAGGARRAADEIE  387 (392)
T ss_pred             HHHcCCHHHHHHHHH
Confidence            333345555555544

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=98.62  E-value=1.4e-06  Score=72.28  Aligned_cols=206  Identities=17%  Similarity=0.113  Sum_probs=130.3

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc--cc
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EK  104 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k  104 (294)
                      ...+.+.+|.+++.=.+..+.+.+.+ .   .++.+.|..-... .-.......+.+.+...+.+.+.+..|+-+.  .+
T Consensus       130 a~~i~~~~D~lLailPFE~~~y~k~g-~---~~~yVGHpl~d~i-~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~r  204 (381)
T COG0763         130 AVKIAKYVDHLLAILPFEPAFYDKFG-L---PCTYVGHPLADEI-PLLPDREAAREKLGIDADEKTLALLPGSRRSEIRR  204 (381)
T ss_pred             HHHHHHHhhHeeeecCCCHHHHHhcC-C---CeEEeCChhhhhc-cccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHH
Confidence            55677889999999999999998864 3   3677777653222 1122334466666666666777888886532  34


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcCCCe-EEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          105 SLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       105 ~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~v-~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      ....+.++++.+    |+.++++--.....+.++......+. ...-.+...+-.+.+..||+.+..|     |+..+|+
T Consensus       205 l~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~  279 (381)
T COG0763         205 LLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-----GTATLEA  279 (381)
T ss_pred             HHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHH
Confidence            455666666544    78999988766554444444332222 1233344567889999999999887     9999999


Q ss_pred             HhcCCCEEee-cCCCcccccccC-------------C--CCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 022615          180 MSSGIPVVGV-RAGGIPDIIPED-------------Q--DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE  242 (294)
Q Consensus       180 ~a~G~pvI~~-~~~~~~e~~~~~-------------~--~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  242 (294)
                      +.+|+|.|++ ....+.-++...             -  .-..-++-....++.+++++..++.|...+.++.+...+.
T Consensus       280 aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l  358 (381)
T COG0763         280 ALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFREL  358 (381)
T ss_pred             HHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence            9999998764 333222211000             0  0001111133468899999999998886666666555544

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=98.60  E-value=5.1e-07  Score=76.25  Aligned_cols=198  Identities=14%  Similarity=0.124  Sum_probs=110.7

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCC-CccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHP-RFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      .....+-+.||.-+++++..++.+.+.+ .++++|+++.|.. |.-.... ...............+++.+++..=+...
T Consensus       114 ~~R~~i~~la~lhf~~t~~~~~~L~~~G-~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~  192 (346)
T PF02350_consen  114 INRHAIDKLAHLHFAPTEEARERLLQEG-EPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTN  192 (346)
T ss_dssp             HHHHHHHHH-SEEEESSHHHHHHHHHTT---GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCC
T ss_pred             hhhhhhhhhhhhhccCCHHHHHHHHhcC-CCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchh
Confidence            4555566789999999999999999965 6778999998743 3221110 00000000111112334444444422221


Q ss_pred             ---cccHHHHHHHH---HhCCCcEEEEEcC--CccHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEeecCCCCcc
Q 022615          103 ---EKSLDFLKRVM---DRLPEARIAFIGD--GPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  173 (294)
Q Consensus       103 ---~k~~~~l~~~~---~~~~~~~l~i~G~--~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~  173 (294)
                         ......+.+++   ...+++.+++...  ......+.+.+.. .++.+...++..++..+++.|+++|.-|     |
T Consensus       193 ~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s  267 (346)
T PF02350_consen  193 EDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADLVVGDS-----S  267 (346)
T ss_dssp             CTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT-TTEEEE----HHHHHHHHHHESEEEESS-----H
T ss_pred             cCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceEEEEcC-----c
Confidence               22233444444   3336788887765  3333444444433 2899999999999999999999998655     5


Q ss_pred             hHHH-HHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHH
Q 022615          174 LVVL-EAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       174 ~~~~-Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                       .+. ||.++|+|+|.- +.+.-.+..   ..+.+.+ +. .|.+++.+++.+++.+.+.+.+
T Consensus       268 -GI~eEa~~lg~P~v~iR~~geRqe~r---~~~~nvl-v~-~~~~~I~~ai~~~l~~~~~~~~  324 (346)
T PF02350_consen  268 -GIQEEAPSLGKPVVNIRDSGERQEGR---ERGSNVL-VG-TDPEAIIQAIEKALSDKDFYRK  324 (346)
T ss_dssp             -HHHHHGGGGT--EEECSSS-S-HHHH---HTTSEEE-ET-SSHHHHHHHHHHHHH-HHHHHH
T ss_pred             -cHHHHHHHhCCeEEEecCCCCCHHHH---hhcceEE-eC-CCHHHHHHHHHHHHhChHHHHh
Confidence             455 999999999987 445556665   4455555 54 6999999999999987544433

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.58  E-value=2.8e-06  Score=68.55  Aligned_cols=220  Identities=12%  Similarity=0.086  Sum_probs=129.6

Q ss_pred             CCCcccccHHHHHHHHHHhCCeEEecchhhHHHH-HHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCce
Q 022615           15 TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL-EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL   93 (294)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~-~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (294)
                      ..+|..+.+..+.|...++...|++ ...-..++ ++.++++ .+....|.-.++........          ..++...
T Consensus        80 ~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~~~a~~~~~v~-~~llyfpt~m~~~l~~~~~~----------~~~~~~~  147 (322)
T PRK02797         80 SKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLSYFAQRHPKVP-GSLLYFPTRMDPSLNTMAND----------RQRAGKM  147 (322)
T ss_pred             ccchhHHHHHHHHHHHHhhcCeEEE-ecchHHHHHHhcCCCC-ccEEecCCcchhhhcccccc----------ccCCCce
Confidence            3667777778889999999999999 65666664 4545554 33433333333221111100          1122334


Q ss_pred             EEEeecc-cccccHHHHHHHHHhC--CCcEEEEE-cC--C--ccHHHHHhhhcC----CCe-EEEecccchhHHHHHhcC
Q 022615           94 IVHVGRL-GVEKSLDFLKRVMDRL--PEARIAFI-GD--G--PYREELEKMFTG----MPA-VFTGMLLGEELSQAYASG  160 (294)
Q Consensus        94 i~~~G~~-~~~k~~~~l~~~~~~~--~~~~l~i~-G~--~--~~~~~~~~~~~~----~~v-~~~g~~~~~~~~~~~~~a  160 (294)
                      .+.+|+- ++..++..+++++.+.  .++++++- |.  |  .+.+.+.+..++    .++ .+..+++.+|..++++.|
T Consensus       148 tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~  227 (322)
T PRK02797        148 TILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQC  227 (322)
T ss_pred             EEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhC
Confidence            5556655 5566677778888665  45666553 43  2  234444444442    243 456778889999999999


Q ss_pred             CEEEeecC-CCCcchHHHHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCH--HHHHHHHHHHhhChHHHHHHH
Q 022615          161 DVFVMPSE-SETLGLVVLEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDL--DDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       161 d~~l~ps~-~e~~~~~~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~--~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      |++++... ..|+|+.++ .+..|+||+.+ +++...++.   +.+-.. +++.++.  ..+.+          ..+++.
T Consensus       228 Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~---e~gv~V-lf~~d~L~~~~v~e----------~~rql~  292 (322)
T PRK02797        228 DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLT---EQGLPV-LFTGDDLDEDIVRE----------AQRQLA  292 (322)
T ss_pred             CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHH---hCCCeE-EecCCcccHHHHHH----------HHHHHH
Confidence            99998765 678886654 89999999877 556666655   334333 2333222  12211          122233


Q ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 022615          237 QAARQEMEKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       237 ~~~~~~~~~~s~~~~~~~~~~~l~~~~  263 (294)
                      ...++.+. |+-++..+.|. .++..+
T Consensus       293 ~~dk~~I~-Ff~pn~~~~W~-~~l~~~  317 (322)
T PRK02797        293 SVDKNIIA-FFSPNYLQGWR-NALAIA  317 (322)
T ss_pred             hhCcceee-ecCHhHHHHHH-HHHHHh
Confidence            33333333 88888888887 565544

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=98.49  E-value=3.7e-06  Score=72.99  Aligned_cols=138  Identities=16%  Similarity=0.097  Sum_probs=89.0

Q ss_pred             CCCceEEEeecccc---cccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           89 PDKPLIVHVGRLGV---EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        89 ~~~~~i~~~G~~~~---~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      .+..+++..|+...   .+....+++++...+...++.+|......    .....||.+.+++++   ..++..||++|.
T Consensus       238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~----~~~~~~v~~~~~~p~---~~ll~~~d~~I~  310 (401)
T cd03784         238 GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA----EDLPDNVRVVDFVPH---DWLLPRCAAVVH  310 (401)
T ss_pred             CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc----cCCCCceEEeCCCCH---HHHhhhhheeee
Confidence            34567778888743   34456777888776433344556543221    122347999999864   456888999983


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      -    |..+++.|++++|+|+|+.....    ..+.+   ...+.|......  +.+++.+++.++++++ .+++..+.+
T Consensus       311 h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~---~~~G~g~~l~~~~~~~~~l~~al~~~l~~~-~~~~~~~~~  382 (401)
T cd03784         311 H----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARV---AELGAGPALDPRELTAERLAAALRRLLDPP-SRRRAAALL  382 (401)
T ss_pred             c----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH---HHCCCCCCCCcccCCHHHHHHHHHHHhCHH-HHHHHHHHH
Confidence            3    33588999999999999886543    23333   345566666554  6899999999998743 344444333


Q ss_pred             HH
Q 022615          240 RQ  241 (294)
Q Consensus       240 ~~  241 (294)
                      .+
T Consensus       383 ~~  384 (401)
T cd03784         383 RR  384 (401)
T ss_pred             HH
Confidence            33

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.45  E-value=2.5e-05  Score=69.36  Aligned_cols=217  Identities=12%  Similarity=0.099  Sum_probs=130.6

Q ss_pred             eeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCC
Q 022615            9 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE   88 (294)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~   88 (294)
                      +|++..-|.|..+.    .+.+-+.+|.+++.=+...+.+++.+ .   +++.+.|+.-.. ..........+.+.+...
T Consensus       341 yYVsPqVWAWR~~R----ikki~k~vD~ll~IfPFE~~~y~~~g-v---~v~yVGHPL~d~-i~~~~~~~~~r~~lgl~~  411 (608)
T PRK01021        341 HYVCPSIWAWRPKR----KTILEKYLDLLLLILPFEQNLFKDSP-L---RTVYLGHPLVET-ISSFSPNLSWKEQLHLPS  411 (608)
T ss_pred             EEECccceeeCcch----HHHHHHHhhhheecCccCHHHHHhcC-C---CeEEECCcHHhh-cccCCCHHHHHHHcCCCC
Confidence            34455455555443    35566788999999999999998853 3   578888875222 222223333444444433


Q ss_pred             CCCceEEEeeccc--ccccHHHHHHHHH--hC-CCcEEEEEcCCc-cHHHHHhhhcCCC---eEEEecccchhHHHHHhc
Q 022615           89 PDKPLIVHVGRLG--VEKSLDFLKRVMD--RL-PEARIAFIGDGP-YREELEKMFTGMP---AVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        89 ~~~~~i~~~G~~~--~~k~~~~l~~~~~--~~-~~~~l~i~G~~~-~~~~~~~~~~~~~---v~~~g~~~~~~~~~~~~~  159 (294)
                      ++..+.+..|+-.  -.+....++++++  .+ ++.++++....+ ..+.+++.....+   +.+.   +.++-.++++.
T Consensus       412 ~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii---~~~~~~~~m~a  488 (608)
T PRK01021        412 DKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIV---PSQFRYELMRE  488 (608)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEe---cCcchHHHHHh
Confidence            4455667777542  2455778888887  65 567776654332 3455666554322   2322   12234799999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEee-cCCCccc------------------ccccCCCCcceee--cCCCCHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGV-RAGGIPD------------------IIPEDQDGKIGYL--FNPGDLDDC  218 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~-~~~~~~e------------------~~~~~~~~~~g~~--~~~~d~~~l  218 (294)
                      ||+.+..|     |+..+|++.+|+|.|+. ......-                  ++.. +.-..-++  -+..+++.+
T Consensus       489 aD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPEllqgQ~~~tpe~L  562 (608)
T PRK01021        489 CDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPEFIGGKKDFQPEEV  562 (608)
T ss_pred             cCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchhhcCCcccCCHHHH
Confidence            99999888     99999999999998753 3332221                  1100 00011122  134578999


Q ss_pred             HHHHHHHhhChHHHHHHHHHHHHHHH
Q 022615          219 LSKLEPLLYNQELRETMGQAARQEME  244 (294)
Q Consensus       219 ~~~i~~ll~~~~~~~~~~~~~~~~~~  244 (294)
                      ++++ +++.|++.++++.+...+..+
T Consensus       563 a~~l-~lL~d~~~r~~~~~~l~~lr~  587 (608)
T PRK01021        563 AAAL-DILKTSQSKEKQKDACRDLYQ  587 (608)
T ss_pred             HHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence            9886 777887777666665555443

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=98.41  E-value=2.7e-05  Score=67.59  Aligned_cols=175  Identities=12%  Similarity=0.113  Sum_probs=114.0

Q ss_pred             CCCCceEEEeeccccc--ccHHHHHHHHHhCCCcEEEEEcCCccH---HHHHhhhcCC-----CeEEEecccchhHHHHH
Q 022615           88 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGPYR---EELEKMFTGM-----PAVFTGMLLGEELSQAY  157 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~-----~v~~~g~~~~~~~~~~~  157 (294)
                      +++.+++++.++..+.  .-+....+.++..|+-.|.+.|.|++.   ..++++.+..     ++.|.+..++++..+-|
T Consensus       427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~  506 (620)
T COG3914         427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY  506 (620)
T ss_pred             CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence            3444455555544222  124555677788899999999876543   3555555544     58999999999999999


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCccccccc---CCCCcceeecCCCCHHHHHHHHHHHhhChHHHHH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE---DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~---~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                      .-||+++-..- -+..++.+|++.+|+||++-....+..-+..   ..-|-.-++..  +.++..+.-..+-.|...+++
T Consensus       507 ~iADlvLDTyP-Y~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~--s~~dYV~~av~~g~dral~q~  583 (620)
T COG3914         507 GIADLVLDTYP-YGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVAD--SRADYVEKAVAFGSDRALRQQ  583 (620)
T ss_pred             chhheeeeccc-CCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcC--CHHHHHHHHHHhcccHHHHHh
Confidence            99999985433 3456778999999999998533211111100   01122223343  667777777777677766666


Q ss_pred             HHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHHH
Q 022615          235 MGQAARQEME---KYDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       235 ~~~~~~~~~~---~~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      .+..-++..+   -|+.+.+++++. .+|..+...
T Consensus       584 ~r~~l~~~r~tspL~d~~~far~le-~~y~~M~~~  617 (620)
T COG3914         584 VRAELKRSRQTSPLFDPKAFARKLE-TLYWGMWSE  617 (620)
T ss_pred             hHHHHHhccccCcccCHHHHHHHHH-HHHHHHHHh
Confidence            6655544442   289999999998 788887654

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.37  E-value=5.1e-05  Score=62.31  Aligned_cols=172  Identities=9%  Similarity=0.049  Sum_probs=110.8

Q ss_pred             CCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceE
Q 022615           15 TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI   94 (294)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i   94 (294)
                      ..+|..+.+..+.+...++...|++ ...-..++++.++..+......|.-++.........          ...+...-
T Consensus       119 ~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~----------~~~~~~lt  187 (360)
T PF07429_consen  119 SRSLKFRLFYFLRRLAQKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN----------KKNKGKLT  187 (360)
T ss_pred             ccccchhHHHHHHHHHHhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhccccc----------cCCCCceE
Confidence            4566667777888999999999876 577778888887644444444454444432222111          11223444


Q ss_pred             EEeecc-cccccHHHHHHHHHhC--CCcEEEEE-cCCc----cHHHHHhhhcC----CCeEE-EecccchhHHHHHhcCC
Q 022615           95 VHVGRL-GVEKSLDFLKRVMDRL--PEARIAFI-GDGP----YREELEKMFTG----MPAVF-TGMLLGEELSQAYASGD  161 (294)
Q Consensus        95 ~~~G~~-~~~k~~~~l~~~~~~~--~~~~l~i~-G~~~----~~~~~~~~~~~----~~v~~-~g~~~~~~~~~~~~~ad  161 (294)
                      +.+|+- ++..++..+++++++.  .++++++- |.|.    +.+.+.+...+    .++.. ..+++.+|..++++.||
T Consensus       188 ILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cD  267 (360)
T PF07429_consen  188 ILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCD  267 (360)
T ss_pred             EEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCC
Confidence            555655 5555577777777654  45666553 4443    34444444443    25654 56899999999999999


Q ss_pred             EEEeecC-CCCcchHHHHHHhcCCCEEeecCCCccccc
Q 022615          162 VFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDII  198 (294)
Q Consensus       162 ~~l~ps~-~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~  198 (294)
                      ++++... ..|.|+.+ -.+.+|+||+.+....+-..+
T Consensus       268 l~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l  304 (360)
T PF07429_consen  268 LGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDL  304 (360)
T ss_pred             EEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHH
Confidence            9999876 67777655 499999999888665444444

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.33  E-value=4.2e-05  Score=63.82  Aligned_cols=218  Identities=18%  Similarity=0.197  Sum_probs=133.3

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCC---CccchHHHHHhhcCCCCCceEEEee-cc-
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSEMRWRLSNGEPDKPLIVHVG-RL-  100 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~G-~~-  100 (294)
                      ..+..-..+|.-+++++..++.+.+.+ .++++|+++.|.+-......   ........... ....++.+++..+ |- 
T Consensus       138 NR~l~~~~S~~hfapte~ar~nLl~EG-~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~-~~~~~~~~iLvT~HRre  215 (383)
T COG0381         138 NRRLTSHLSDLHFAPTEIARKNLLREG-VPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKG-LDDKDKKYILVTAHRRE  215 (383)
T ss_pred             HHHHHHHhhhhhcCChHHHHHHHHHcC-CCccceEEeCChHHHHHHHHHhhhccchhhHHhh-hccccCcEEEEEcchhh
Confidence            344555678999999999999999876 56778999998652221111   11111111111 1233333444443 33 


Q ss_pred             cccccHHHHHHHH----HhCCCcEEEEEcCC-c-cHHHH-HhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcc
Q 022615          101 GVEKSLDFLKRVM----DRLPEARIAFIGDG-P-YREEL-EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  173 (294)
Q Consensus       101 ~~~k~~~~l~~~~----~~~~~~~l~i~G~~-~-~~~~~-~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~  173 (294)
                      ...+++..+++++    +..+++.++.--.. + .++.. ..+....++.++..+...++..+++.|-+++.-|     |
T Consensus       216 N~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-----G  290 (383)
T COG0381         216 NVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-----G  290 (383)
T ss_pred             cccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-----C
Confidence            1225666666654    44455555544321 1 12222 2222334799999999999999999998887655     6


Q ss_pred             hHHHHHHhcCCCEEeec-CCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHH
Q 022615          174 LVVLEAMSSGIPVVGVR-AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAAT  252 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~-~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~  252 (294)
                      ...=||-..|+||++-. ...-+|.+   ..|.. .++. .+.+.+.+++..++++++.+++|+....-+-+-.+.++++
T Consensus       291 giqEEAp~lg~Pvl~lR~~TERPE~v---~agt~-~lvg-~~~~~i~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv  365 (383)
T COG0381         291 GIQEEAPSLGKPVLVLRDTTERPEGV---EAGTN-ILVG-TDEENILDAATELLEDEEFYERMSNAKNPYGDGNASERIV  365 (383)
T ss_pred             chhhhHHhcCCcEEeeccCCCCccce---ecCce-EEeC-ccHHHHHHHHHHHhhChHHHHHHhcccCCCcCcchHHHHH
Confidence            67789999999998864 45666766   33333 3333 3779999999999999998887775443333222334343


Q ss_pred             HHH
Q 022615          253 RTI  255 (294)
Q Consensus       253 ~~~  255 (294)
                      +-+
T Consensus       366 ~~l  368 (383)
T COG0381         366 EIL  368 (383)
T ss_pred             HHH
Confidence            333

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.25  E-value=5.4e-05  Score=67.36  Aligned_cols=151  Identities=13%  Similarity=0.082  Sum_probs=95.2

Q ss_pred             CceEEEeeccc-----ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHH--hcCCEE
Q 022615           91 KPLIVHVGRLG-----VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF  163 (294)
Q Consensus        91 ~~~i~~~G~~~-----~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~ad~~  163 (294)
                      ..+++..|...     +.+-...++++++.++. ++++...+....    .....||.+.+++|+.+   ++  ..++++
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~-~viw~~~~~~~~----~~~p~Nv~i~~w~Pq~~---lL~hp~v~~f  368 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPY-NVLWKYDGEVEA----INLPANVLTQKWFPQRA---VLKHKNVKAF  368 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCC-eEEEEECCCcCc----ccCCCceEEecCCCHHH---HhcCCCCCEE
Confidence            46778888763     23456788899998874 666554432211    11235899999998765   55  457777


Q ss_pred             EeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC--CCHHHHHHHHHHHhhChHHHHHHHH
Q 022615          164 VMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQ  237 (294)
Q Consensus       164 l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~~~~~  237 (294)
                      |.    -|..+++.||+.+|+|+|+-+..    .....+   ...+.|...+.  -+.+++.++|.++++|+..++...+
T Consensus       369 It----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv---~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~  441 (507)
T PHA03392        369 VT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY---VELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKE  441 (507)
T ss_pred             Ee----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHH---HHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHHHHH
Confidence            63    34467789999999999986543    233333   34556666654  3678999999999998776555444


Q ss_pred             HHHHHHHh-CCHHHHHHHHH
Q 022615          238 AARQEMEK-YDWRAATRTIR  256 (294)
Q Consensus       238 ~~~~~~~~-~s~~~~~~~~~  256 (294)
                      -++...++ .+....+-.+.
T Consensus       442 ls~~~~~~p~~~~~~av~~i  461 (507)
T PHA03392        442 LRHLIRHQPMTPLHKAIWYT  461 (507)
T ss_pred             HHHHHHhCCCCHHHHHHHHH
Confidence            44443333 33433333333

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=98.18  E-value=1.8e-05  Score=66.37  Aligned_cols=121  Identities=15%  Similarity=0.147  Sum_probs=82.1

Q ss_pred             CCceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615           90 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      ...+++++|..+..    .++++++.+++..++++|....      .....|+.+.++. ..++.++|..||++|.-.  
T Consensus       192 ~~~iLv~~gg~~~~----~~~~~l~~~~~~~~~v~g~~~~------~~~~~ni~~~~~~-~~~~~~~m~~ad~vIs~~--  258 (318)
T PF13528_consen  192 EPKILVYFGGGGPG----DLIEALKALPDYQFIVFGPNAA------DPRPGNIHVRPFS-TPDFAELMAAADLVISKG--  258 (318)
T ss_pred             CCEEEEEeCCCcHH----HHHHHHHhCCCCeEEEEcCCcc------cccCCCEEEeecC-hHHHHHHHHhCCEEEECC--
Confidence            45678888877665    6788899999999999986531      1115578876653 478999999999999654  


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCCccccc---ccCCCCcceeecC--CCCHHHHHHHHHHH
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGKIGYLFN--PGDLDDCLSKLEPL  225 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~---~~~~~~~~g~~~~--~~d~~~l~~~i~~l  225 (294)
                        .-+++.|++++|+|+|+-+..+..|-.   ...+..+.|...+  .-+++.+.+.|.++
T Consensus       259 --G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  259 --GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             --CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence              234599999999999987765422211   0003344555544  33567777777653

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.15  E-value=8.1e-05  Score=64.37  Aligned_cols=152  Identities=15%  Similarity=0.163  Sum_probs=95.3

Q ss_pred             CCceEEEeeccccc-ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecC
Q 022615           90 DKPLIVHVGRLGVE-KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus        90 ~~~~i~~~G~~~~~-k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      ...+.+..|..... .-+..+++++..+ +.++++...+ ......  ....|+...+++++.+   ++..||++|+.. 
T Consensus       237 ~~~vyvslGt~~~~~~l~~~~~~a~~~l-~~~vi~~~~~-~~~~~~--~~p~n~~v~~~~p~~~---~l~~ad~vI~hG-  308 (406)
T COG1819         237 RPIVYVSLGTVGNAVELLAIVLEALADL-DVRVIVSLGG-ARDTLV--NVPDNVIVADYVPQLE---LLPRADAVIHHG-  308 (406)
T ss_pred             CCeEEEEcCCcccHHHHHHHHHHHHhcC-CcEEEEeccc-cccccc--cCCCceEEecCCCHHH---HhhhcCEEEecC-
Confidence            44556666766544 2234455566655 4566666533 111111  1234788888887665   899999999654 


Q ss_pred             CCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecC--CCCHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 022615          169 SETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQAARQE  242 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~--~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  242 (294)
                         ..+++.|++.+|+|+|+-..+    ...+.+   +.-+.|....  .-+.+.+.++|.++++++..++...+..+..
T Consensus       309 ---G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv---e~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~  382 (406)
T COG1819         309 ---GAGTTSEALYAGVPLVVIPDGADQPLNAERV---EELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEF  382 (406)
T ss_pred             ---CcchHHHHHHcCCCEEEecCCcchhHHHHHH---HHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence               356789999999999986544    233344   4556776666  5689999999999999887655544433333


Q ss_pred             HHhCCHHHHHHHH
Q 022615          243 MEKYDWRAATRTI  255 (294)
Q Consensus       243 ~~~~s~~~~~~~~  255 (294)
                      .+.-.....++.+
T Consensus       383 ~~~~g~~~~a~~l  395 (406)
T COG1819         383 KEEDGPAKAADLL  395 (406)
T ss_pred             hhcccHHHHHHHH
Confidence            3334433344433

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.14  E-value=4.8e-07  Score=68.43  Aligned_cols=111  Identities=16%  Similarity=0.221  Sum_probs=67.9

Q ss_pred             cEE-EEEcCCccHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC---
Q 022615          119 ARI-AFIGDGPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG---  193 (294)
Q Consensus       119 ~~l-~i~G~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~---  193 (294)
                      +++ +++|.....+...+.... .++.+.++.  +++.++|+.||++|.-.    .++++.|++++|+|.|.-+...   
T Consensus        32 ~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~--~~m~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~  105 (167)
T PF04101_consen   32 IQVIVQTGKNNYEELKIKVENFNPNVKVFGFV--DNMAELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPGAAD  105 (167)
T ss_dssp             CCCCCCCTTCECHHHCCCHCCTTCCCEEECSS--SSHHHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T
T ss_pred             cEEEEEECCCcHHHHHHHHhccCCcEEEEech--hhHHHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCCcch
Confidence            444 445665443333332222 479999998  78999999999998543    3678999999999998766554   


Q ss_pred             -----cccccccCCCCcceeecCC--CCHHHHHHHHHHHhhChHHHHHHHHH
Q 022615          194 -----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQA  238 (294)
Q Consensus       194 -----~~e~~~~~~~~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~~~~~~  238 (294)
                           ....+   .....+..+..  .+.+.+.+.|..++.++.....+..+
T Consensus       106 ~~q~~na~~~---~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~  154 (167)
T PF04101_consen  106 NHQEENAKEL---AKKGAAIMLDESELNPEELAEAIEELLSDPEKLKEMAKA  154 (167)
T ss_dssp             -CHHHHHHHH---HHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred             HHHHHHHHHH---HHcCCccccCcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence                 11222   12223333332  23678999999999888765555444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=98.12  E-value=4.5e-05  Score=64.10  Aligned_cols=121  Identities=10%  Similarity=0.140  Sum_probs=78.9

Q ss_pred             CceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCC
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESE  170 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e  170 (294)
                      ..++++.|.    .+...+++++.+++++.+++.+.....   ..+  ..|+.+.++.+ +++.++|..||++|.-+.  
T Consensus       189 ~~iLv~~g~----~~~~~l~~~l~~~~~~~~i~~~~~~~~---~~~--~~~v~~~~~~~-~~~~~~l~~ad~vI~~~G--  256 (321)
T TIGR00661       189 DYILVYIGF----EYRYKILELLGKIANVKFVCYSYEVAK---NSY--NENVEIRRITT-DNFKELIKNAELVITHGG--  256 (321)
T ss_pred             CcEEEECCc----CCHHHHHHHHHhCCCeEEEEeCCCCCc---ccc--CCCEEEEECCh-HHHHHHHHhCCEEEECCC--
Confidence            345666543    345667888888887666554322111   111  34788888775 689999999999997652  


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCccc------ccccCCCCcceeecCCCCHHHHHHHHHHHhhCh
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPD------IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  229 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e------~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~  229 (294)
                        ..++.|++++|+|+|..+..+..|      .+   ...+.|...+..+. ++.+++...++++
T Consensus       257 --~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l---~~~g~~~~l~~~~~-~~~~~~~~~~~~~  315 (321)
T TIGR00661       257 --FSLISEALSLGKPLIVIPDLGQFEQGNNAVKL---EDLGCGIALEYKEL-RLLEAILDIRNMK  315 (321)
T ss_pred             --hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH---HHCCCEEEcChhhH-HHHHHHHhccccc
Confidence              346899999999999987754323      23   44566777766665 5555555554443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.08  E-value=5.1e-05  Score=63.86  Aligned_cols=229  Identities=19%  Similarity=0.224  Sum_probs=137.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHH----HHH------------hhcCC
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM----RWR------------LSNGE   88 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~----~~~------------~~~~~   88 (294)
                      .++|.....|+...++|+-+.-..+.....  +.=.+.|||.+...|...-.-...    +.+            ..+..
T Consensus       244 C~ERaa~h~AhVFTTVSeITa~EAeHlLkR--KPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFdL  321 (692)
T KOG3742|consen  244 CLERAAAHTAHVFTTVSEITALEAEHLLKR--KPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFDL  321 (692)
T ss_pred             HHHHHhhhhhhhhhhHHHHHHHHHHHHHhc--CCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccccc
Confidence            578888888999999998776555443322  233567999998877543221110    000            12334


Q ss_pred             CCCceEEEeeccc-ccccHHHHHHHHHhCC--------C---cEEEEEcC------------------------------
Q 022615           89 PDKPLIVHVGRLG-VEKSLDFLKRVMDRLP--------E---ARIAFIGD------------------------------  126 (294)
Q Consensus        89 ~~~~~i~~~G~~~-~~k~~~~l~~~~~~~~--------~---~~l~i~G~------------------------------  126 (294)
                      ++..++..+||.. ..||.+.+++++.++.        +   +.|.|...                              
T Consensus       322 dkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~  401 (692)
T KOG3742|consen  322 DKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKV  401 (692)
T ss_pred             cceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHH
Confidence            5667888899884 5799999999998761        1   23344321                              


Q ss_pred             ----------C--ccHHHH---------Hhhh-----------------cCC---------------------CeEEEec
Q 022615          127 ----------G--PYREEL---------EKMF-----------------TGM---------------------PAVFTGM  147 (294)
Q Consensus       127 ----------~--~~~~~~---------~~~~-----------------~~~---------------------~v~~~g~  147 (294)
                                |  ++..++         +..+                 .+.                     .|+|++.
T Consensus       402 Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPE  481 (692)
T KOG3742|consen  402 GKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPE  481 (692)
T ss_pred             HHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHH
Confidence                      0  000000         0000                 000                     1333322


Q ss_pred             -c------cchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC--CCCcceeecC-------
Q 022615          148 -L------LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--QDGKIGYLFN-------  211 (294)
Q Consensus       148 -~------~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~--~~~~~g~~~~-------  211 (294)
                       +      -.-|..++.+.|++.++||++|.+|.+..|.-.+|+|-|+++..|+..+.++.  .+...|+.+-       
T Consensus       482 FLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~  561 (692)
T KOG3742|consen  482 FLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSP  561 (692)
T ss_pred             HhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCCh
Confidence             1      12368899999999999999999999999999999999999998776555221  1122444332       


Q ss_pred             CCCHHHHHHHHHHHhhChHHHHHHHHHHHH-HH-HhCCHHHHHHHHH
Q 022615          212 PGDLDDCLSKLEPLLYNQELRETMGQAARQ-EM-EKYDWRAATRTIR  256 (294)
Q Consensus       212 ~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~-~~-~~~s~~~~~~~~~  256 (294)
                      .++.+++++.+..+.. ...++++.+..+. .+ +-.+|..+...+.
T Consensus       562 deSv~qL~~~m~~F~~-qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~  607 (692)
T KOG3742|consen  562 DESVQQLASFMYEFCK-QSRRQRIIQRNRTERLSDLLDWKYLGRYYR  607 (692)
T ss_pred             hhHHHHHHHHHHHHHH-HHHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence            2345566666655543 2334444444332 23 3478887776665

>PLN02670 transferase, transferring glycosyl groups

Probab=98.04  E-value=0.0002  Score=63.00  Aligned_cols=164  Identities=10%  Similarity=0.065  Sum_probs=97.9

Q ss_pred             CCCceEEEeeccc--ccccHHHHHHHHHhCCCcEEEEE-cC--Cc-------cHHHHHhhhcCCCeEEEecccchhHHHH
Q 022615           89 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFI-GD--GP-------YREELEKMFTGMPAVFTGMLLGEELSQA  156 (294)
Q Consensus        89 ~~~~~i~~~G~~~--~~k~~~~l~~~~~~~~~~~l~i~-G~--~~-------~~~~~~~~~~~~~v~~~g~~~~~~~~~~  156 (294)
                      ++..+.+.+|...  ....+..+..+++..+. .|+++ ..  +.       ..+.+.+..+..++.+.+++|+.+   +
T Consensus       277 ~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~---I  352 (472)
T PLN02670        277 VNSVVYVALGTEASLRREEVTELALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVK---I  352 (472)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHH---H
Confidence            3456677778763  23456677778887765 44333 21  11       112233334444577889998766   5


Q ss_pred             HhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC------CCHHHHHHHHHHHh
Q 022615          157 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP------GDLDDCLSKLEPLL  226 (294)
Q Consensus       157 ~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~------~d~~~l~~~i~~ll  226 (294)
                      ++...+..+-+.  +.-++++|++++|+|+|+.+..    .....+   ...+.|+.+..      -+.+++.++|.+++
T Consensus       353 L~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm  427 (472)
T PLN02670        353 LSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL---HGKKLGLEVPRDERDGSFTSDSVAESVRLAM  427 (472)
T ss_pred             hcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHH---HHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence            666666444442  3457899999999999997543    233333   23456665532      25899999999999


Q ss_pred             hChHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHH
Q 022615          227 YNQELRETMGQAARQEM----EKYDWRAATRTIRNEQYNA  262 (294)
Q Consensus       227 ~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~l~~~  262 (294)
                      .+++ -.++++++++..    ++=....+++.+++.+++.
T Consensus       428 ~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~  466 (472)
T PLN02670        428 VDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN  466 (472)
T ss_pred             cCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence            7752 123444444443    3355666666666555443

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=98.04  E-value=1.7e-06  Score=65.58  Aligned_cols=48  Identities=21%  Similarity=0.279  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCC
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF   71 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~   71 (294)
                      ...+++.+++.+|.++++|+.+++.+.+ ++.+++++.+||||+|.+.|
T Consensus       129 ~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  129 NFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             HHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred             hhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence            3445677789999999999999999999 88888999999999999876

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=97.83  E-value=0.014  Score=50.89  Aligned_cols=213  Identities=8%  Similarity=-0.004  Sum_probs=114.2

Q ss_pred             cccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch----HHHHHhhcC
Q 022615           12 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----EMRWRLSNG   87 (294)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~----~~~~~~~~~   87 (294)
                      +...++...+..+.+.+++++++|.|.+=.+...+.+++. |++..++.+.+   |+.+.-+....+    .........
T Consensus       155 gqsiGPf~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~l-Gv~~~~v~~~a---DpAF~L~~~~~~~~~~~~~~~~~~~  230 (426)
T PRK10017        155 GHSVGPFQDEQFNQLANYVFGHCDALILRESVSLDLMKRS-NITTAKVEHGV---DTAWLVDHHTEDFTASYAVQHWLDV  230 (426)
T ss_pred             CCcCCCcCCHHHHHHHHHHHhcCCEEEEccHHHHHHHHHh-CCCccceEEec---ChhhhCCccccccccchhhhhhhcc
Confidence            3344444555667899999999999999999889999775 45555677665   333222211100    000001001


Q ss_pred             CCCCceEEEe-eccccc--------c-cHHHHHHHHHhC--CCcEEEEEcC-------Ccc-HH---HHHhhhcCC-CeE
Q 022615           88 EPDKPLIVHV-GRLGVE--------K-SLDFLKRVMDRL--PEARIAFIGD-------GPY-RE---ELEKMFTGM-PAV  143 (294)
Q Consensus        88 ~~~~~~i~~~-G~~~~~--------k-~~~~l~~~~~~~--~~~~l~i~G~-------~~~-~~---~~~~~~~~~-~v~  143 (294)
                      ...+..|++. ..+.+.        . -...+.++++.+  .+.+++++..       +.+ ..   .+.+..... ++.
T Consensus       231 ~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~  310 (426)
T PRK10017        231 AAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYH  310 (426)
T ss_pred             cccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccccccee
Confidence            1223344333 223211        1 113333444433  3555555432       122 22   222232222 222


Q ss_pred             -EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC-CcccccccCCCCcceeec--CCCCHHHHH
Q 022615          144 -FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLF--NPGDLDDCL  219 (294)
Q Consensus       144 -~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~-~~~e~~~~~~~~~~g~~~--~~~d~~~l~  219 (294)
                       +.+..+..++..+++.||++|..-     -..++=|++.|+|+|+-... -...++..  -+...+++  ..-+.+++.
T Consensus       311 vi~~~~~~~e~~~iIs~~dl~ig~R-----lHa~I~a~~~gvP~i~i~Y~~K~~~~~~~--lg~~~~~~~~~~l~~~~Li  383 (426)
T PRK10017        311 VVMDELNDLEMGKILGACELTVGTR-----LHSAIISMNFGTPAIAINYEHKSAGIMQQ--LGLPEMAIDIRHLLDGSLQ  383 (426)
T ss_pred             EecCCCChHHHHHHHhhCCEEEEec-----chHHHHHHHcCCCEEEeeehHHHHHHHHH--cCCccEEechhhCCHHHHH
Confidence             344455678889999999998553     34567799999999875432 12222211  02222322  334678899


Q ss_pred             HHHHHHhhChHHHHHH
Q 022615          220 SKLEPLLYNQELRETM  235 (294)
Q Consensus       220 ~~i~~ll~~~~~~~~~  235 (294)
                      +.+.+++++.+.+++.
T Consensus       384 ~~v~~~~~~r~~~~~~  399 (426)
T PRK10017        384 AMVADTLGQLPALNAR  399 (426)
T ss_pred             HHHHHHHhCHHHHHHH
Confidence            9999999987765443

>PLN03004 UDP-glycosyltransferase

Probab=97.82  E-value=0.00043  Score=60.54  Aligned_cols=134  Identities=12%  Similarity=0.047  Sum_probs=85.7

Q ss_pred             CCCceEEEeecc--cccccHHHHHHHHHhCCCcEEEEEcCCc------------cHHHHHhhhcCCCeEEEecccchhHH
Q 022615           89 PDKPLIVHVGRL--GVEKSLDFLKRVMDRLPEARIAFIGDGP------------YREELEKMFTGMPAVFTGMLLGEELS  154 (294)
Q Consensus        89 ~~~~~i~~~G~~--~~~k~~~~l~~~~~~~~~~~l~i~G~~~------------~~~~~~~~~~~~~v~~~g~~~~~~~~  154 (294)
                      ++..+.+.+|..  -+.+....+..+++..+.--+..+....            ..+.+.+..+..++.+.+++|+.+  
T Consensus       269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~--  346 (451)
T PLN03004        269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP--  346 (451)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH--
Confidence            355677788877  2344566777788877663333333210            112233444556888899998876  


Q ss_pred             HHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecC----CCcccccccCC-CCcceeecCC-----CCHHHHHHHHHH
Q 022615          155 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQ-DGKIGYLFNP-----GDLDDCLSKLEP  224 (294)
Q Consensus       155 ~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~----~~~~e~~~~~~-~~~~g~~~~~-----~d~~~l~~~i~~  224 (294)
                       +++.+++..+-+.  +.-++++|++++|+|+|+.+.    ......+   . .-+.|+.++.     -+.+++.+++++
T Consensus       347 -iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~---~~~~g~g~~l~~~~~~~~~~e~l~~av~~  420 (451)
T PLN03004        347 -VLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMI---VDEIKIAISMNESETGFVSSTEVEKRVQE  420 (451)
T ss_pred             -HhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHH---HHHhCceEEecCCcCCccCHHHHHHHHHH
Confidence             6778888555543  345689999999999998754    2333333   2 2356655542     378999999999


Q ss_pred             HhhChH
Q 022615          225 LLYNQE  230 (294)
Q Consensus       225 ll~~~~  230 (294)
                      ++.+++
T Consensus       421 vm~~~~  426 (451)
T PLN03004        421 IIGECP  426 (451)
T ss_pred             HhcCHH
Confidence            998754

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.79  E-value=0.00013  Score=65.42  Aligned_cols=131  Identities=17%  Similarity=0.228  Sum_probs=80.4

Q ss_pred             CCCceEEEeeccc---ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           89 PDKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        89 ~~~~~i~~~G~~~---~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ++..+++.+|.+.   +.+-...++++++++|. ++++.-.+.....+     ..|+.+..++|+.+   +++...+-++
T Consensus       275 ~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~~~l-----~~n~~~~~W~PQ~~---lL~hp~v~~f  345 (500)
T PF00201_consen  275 KKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQ-RFIWKYEGEPPENL-----PKNVLIVKWLPQND---LLAHPRVKLF  345 (500)
T ss_dssp             TTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTT-EEEEEETCSHGCHH-----HTTEEEESS--HHH---HHTSTTEEEE
T ss_pred             CCCEEEEecCcccchhHHHHHHHHHHHHhhCCC-cccccccccccccc-----cceEEEeccccchh---hhhcccceee
Confidence            3456777888763   23335678899999987 66665444222222     23788999998754   5777776555


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC--CCHHHHHHHHHHHhhChHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~  233 (294)
                      -+.  |.-+++.||+.+|+|+|+-+.-    .....+   ++.+.|...+.  -+.+++.++|.++++|+...+
T Consensus       346 itH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~~  414 (500)
T PF00201_consen  346 ITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARV---EEKGVGVVLDKNDLTEEELRAAIREVLENPSYKE  414 (500)
T ss_dssp             EES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHH---HHTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHHH
T ss_pred             eec--cccchhhhhhhccCCccCCCCcccCCccceEE---EEEeeEEEEEecCCcHHHHHHHHHHHHhhhHHHH
Confidence            543  5567899999999999997553    222333   33445555543  357899999999999976443

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02448 UDP-glycosyltransferase family protein

Probab=97.78  E-value=0.0046  Score=54.68  Aligned_cols=141  Identities=15%  Similarity=0.135  Sum_probs=82.9

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      ...+.+.+|....  ...+..++++++.. +..++++..++ ...+.+.. ..++.+.+++|+.+   ++...++..+-+
T Consensus       274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~-~~~~~~~~-~~~~~v~~w~pQ~~---iL~h~~v~~fvt  347 (459)
T PLN02448        274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-GVRFLWVARGE-ASRLKEIC-GDMGLVVPWCDQLK---VLCHSSVGGFWT  347 (459)
T ss_pred             CceEEEeecccccCCHHHHHHHHHHHHhC-CCCEEEEEcCc-hhhHhHhc-cCCEEEeccCCHHH---HhccCccceEEe
Confidence            4466777787632  23366677777766 45666554332 11232222 23667778887766   455666644333


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCC-CcceeecC-------CCCHHHHHHHHHHHhhCh-HHHHH
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFN-------PGDLDDCLSKLEPLLYNQ-ELRET  234 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~-~~~g~~~~-------~~d~~~l~~~i~~ll~~~-~~~~~  234 (294)
                        .+.-++++||+++|+|+|+.+..    .....+   .+ -+.|+.+.       .-+.+++.+++.+++.++ +.-++
T Consensus       348 --HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v---~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~  422 (459)
T PLN02448        348 --HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLI---VEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKE  422 (459)
T ss_pred             --cCchhHHHHHHHcCCCEEeccccccchhhHHHH---HHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHH
Confidence              24456899999999999987543    222333   22 13454442       236789999999999764 33344


Q ss_pred             HHHHHHH
Q 022615          235 MGQAARQ  241 (294)
Q Consensus       235 ~~~~~~~  241 (294)
                      +++++.+
T Consensus       423 ~r~~a~~  429 (459)
T PLN02448        423 MRRRAKE  429 (459)
T ss_pred             HHHHHHH
Confidence            4444433

>PLN02562 UDP-glycosyltransferase

Probab=97.72  E-value=0.0016  Score=57.18  Aligned_cols=135  Identities=10%  Similarity=0.005  Sum_probs=84.1

Q ss_pred             CCceEEEeeccc---ccccHHHHHHHHHhCCCcEEEE-EcCC---ccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCE
Q 022615           90 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAF-IGDG---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDV  162 (294)
Q Consensus        90 ~~~~i~~~G~~~---~~k~~~~l~~~~~~~~~~~l~i-~G~~---~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~  162 (294)
                      ...+++.+|...   ..+.+..+..+++..+. .|++ +..+   ...+.+.+.. ..|+.+.+++|+.+   +++..++
T Consensus       273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~-~fiW~~~~~~~~~l~~~~~~~~-~~~~~v~~w~PQ~~---iL~h~~v  347 (448)
T PLN02562        273 NSVIYISFGSWVSPIGESNVRTLALALEASGR-PFIWVLNPVWREGLPPGYVERV-SKQGKVVSWAPQLE---VLKHQAV  347 (448)
T ss_pred             CceEEEEecccccCCCHHHHHHHHHHHHHCCC-CEEEEEcCCchhhCCHHHHHHh-ccCEEEEecCCHHH---HhCCCcc
Confidence            346777888753   44567778888888865 4443 4321   1222222222 23677789987766   4666665


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCC-CcceeecCCCCHHHHHHHHHHHhhChHHHHH
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~-~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                      ..+-+.  +.-++++|++++|+|+|+.+..    .....+   .+ .+.|+-+..-+.+++.+++++++.+++.+++
T Consensus       348 ~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~---~~~~g~g~~~~~~~~~~l~~~v~~~l~~~~~r~~  419 (448)
T PLN02562        348 GCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYI---VDVWKIGVRISGFGQKEVEEGLRKVMEDSGMGER  419 (448)
T ss_pred             ceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHH---HHHhCceeEeCCCCHHHHHHHHHHHhCCHHHHHH
Confidence            444443  3356789999999999986543    233333   21 2455555555789999999999987654433

>PLN02208 glycosyltransferase family protein

Probab=97.72  E-value=0.0077  Score=52.81  Aligned_cols=204  Identities=10%  Similarity=0.052  Sum_probs=104.5

Q ss_pred             HHHhCCeEEecchhhHH-HHHHhccCC-cCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc--cc-
Q 022615           30 LHRAADLTLVPSVAIGK-DLEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EK-  104 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~-~~~~~~~~~-~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~--~k-  104 (294)
                      .+..+|.|++.|-...+ .+.+....+ ..++..|..-..... .+.....+...-.....++..+.+.+|....  .+ 
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q  268 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQ  268 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHH
Confidence            45689999998844332 222222111 124554433211110 0011111222222222334667778887742  11 


Q ss_pred             cHHHHHHH-HHhCCCcEEEEEcC-C------ccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          105 SLDFLKRV-MDRLPEARIAFIGD-G------PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       105 ~~~~l~~~-~~~~~~~~l~i~G~-~------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      -.+.+..+ +...| +.+++--. +      ...+.+.+..+..|+.+.+++|+.+   +++...+..+-+.  +.-+++
T Consensus       269 ~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~---iL~H~~v~~FvtH--cG~nS~  342 (442)
T PLN02208        269 FQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPL---ILDHPSIGCFVNH--CGPGTI  342 (442)
T ss_pred             HHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHH---HhcCCccCeEEcc--CCchHH
Confidence            22223332 33333 33333211 1      1122334444456888889998876   5677776555543  344679


Q ss_pred             HHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC-----CCHHHHHHHHHHHhhCh-HHHHHHHHHHHHH
Q 022615          177 LEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP-----GDLDDCLSKLEPLLYNQ-ELRETMGQAARQE  242 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~-----~d~~~l~~~i~~ll~~~-~~~~~~~~~~~~~  242 (294)
                      +|++++|+|+|+.+..    ....++.  +..+.|+.+..     -+.+++.++|.++++++ +..+++++++++.
T Consensus       343 ~Eai~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~  416 (442)
T PLN02208        343 WESLVSDCQMVLIPFLSDQVLFTRLMT--EEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL  416 (442)
T ss_pred             HHHHHcCCCEEecCcchhhHHHHHHHH--HHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence            9999999999997543    2222220  11345555532     26789999999999765 3445555555544

>PLN03007 UDP-glucosyltransferase family protein

Probab=97.68  E-value=0.0034  Score=55.81  Aligned_cols=134  Identities=13%  Similarity=0.102  Sum_probs=79.9

Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCC--------ccHHHHHhhhcCCCeEEEecccchhHHHHHh
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG--------PYREELEKMFTGMPAVFTGMLLGEELSQAYA  158 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~--------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~  158 (294)
                      +...+.+.+|....  .+.+..+.++++..+.--+..++..        ...+.+.+.....++.+.+++|+.   +++.
T Consensus       284 ~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~---~iL~  360 (482)
T PLN03007        284 PDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQV---LILD  360 (482)
T ss_pred             CCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHH---HHhc
Confidence            34567778887632  3455666677776654223334421        111233333445588888999775   5677


Q ss_pred             cCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeec----------CCCCHHHHHHHHHH
Q 022615          159 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLF----------NPGDLDDCLSKLEP  224 (294)
Q Consensus       159 ~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~----------~~~d~~~l~~~i~~  224 (294)
                      .+++..+-+.  +.-++++||+++|+|+|+.+..    .....+.  +..+.|+-+          ..-+.+++.+++++
T Consensus       361 h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~  436 (482)
T PLN03007        361 HQATGGFVTH--CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVT--QVLRTGVSVGAKKLVKVKGDFISREKVEKAVRE  436 (482)
T ss_pred             cCccceeeec--CcchHHHHHHHcCCCeeeccchhhhhhhHHHHH--HhhcceeEeccccccccccCcccHHHHHHHHHH
Confidence            7777554443  3356899999999999997543    2222210  001223222          12378899999999


Q ss_pred             HhhCh
Q 022615          225 LLYNQ  229 (294)
Q Consensus       225 ll~~~  229 (294)
                      ++.++
T Consensus       437 ~m~~~  441 (482)
T PLN03007        437 VIVGE  441 (482)
T ss_pred             HhcCc
Confidence            99775

>PLN02210 UDP-glucosyl transferase

Probab=97.66  E-value=0.0017  Score=57.15  Aligned_cols=158  Identities=11%  Similarity=0.087  Sum_probs=89.8

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEEE-EcCC---ccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEE
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDG---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVF  163 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i-~G~~---~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~  163 (294)
                      ...+.+.+|....  ...+..+..+++..+. .|++ ++..   .....+.+.....+..+.+++|+.+   +++.+++.
T Consensus       269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~-~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~---iL~h~~vg  344 (456)
T PLN02210        269 SSVVYISFGSMLESLENQVETIAKALKNRGV-PFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEK---ILSHMAIS  344 (456)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHhCCC-CEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHH---HhcCcCcC
Confidence            4567777887633  3345666677776644 4443 4421   1222333333223445678887765   67777755


Q ss_pred             EeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCC-CcceeecC------CCCHHHHHHHHHHHhhChH--
Q 022615          164 VMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQD-GKIGYLFN------PGDLDDCLSKLEPLLYNQE--  230 (294)
Q Consensus       164 l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~-~~~g~~~~------~~d~~~l~~~i~~ll~~~~--  230 (294)
                      .+-+.  +.-++++|++++|+|+|+.+..+    ....+   .+ -+.|+.+.      .-+.+++.+++++++.+++  
T Consensus       345 ~FitH--~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~---~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~  419 (456)
T PLN02210        345 CFVTH--CGWNSTIETVVAGVPVVAYPSWTDQPIDARLL---VDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAA  419 (456)
T ss_pred             eEEee--CCcccHHHHHHcCCCEEecccccccHHHHHHH---HHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHH
Confidence            44442  23357889999999999975532    22233   22 35565553      1377899999999997643  


Q ss_pred             ----HHHHHHHHHHHHHHh-CCHHHHHHHHH
Q 022615          231 ----LRETMGQAARQEMEK-YDWRAATRTIR  256 (294)
Q Consensus       231 ----~~~~~~~~~~~~~~~-~s~~~~~~~~~  256 (294)
                          ...++++.+++.+.+ =|.....++++
T Consensus       420 ~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v  450 (456)
T PLN02210        420 DIRRRAAELKHVARLALAPGGSSARNLDLFI  450 (456)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence                223444555555433 34444444444

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=97.60  E-value=5.7e-05  Score=56.10  Aligned_cols=48  Identities=23%  Similarity=0.299  Sum_probs=34.9

Q ss_pred             CcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc
Q 022615           17 SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG   65 (294)
Q Consensus        17 ~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g   65 (294)
                      .+....++.+++.+++.+|.++++|+.+++.+.+ ++.+++++.+||||
T Consensus       113 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vipnG  160 (160)
T PF13579_consen  113 RWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR-YGVPPDRIHVIPNG  160 (160)
T ss_dssp             -HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH-H---GGGEEE----
T ss_pred             chhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH-hCCCCCcEEEeCcC
Confidence            4455566788999999999999999999999999 66788999999997

>PLN00164 glucosyltransferase; Provisional

Probab=97.60  E-value=0.02  Score=50.94  Aligned_cols=144  Identities=14%  Similarity=0.086  Sum_probs=81.9

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEE-EEcCCc---------------cHHHHHhhhcCCCeEEEecccch
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGP---------------YREELEKMFTGMPAVFTGMLLGE  151 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~-i~G~~~---------------~~~~~~~~~~~~~v~~~g~~~~~  151 (294)
                      ...+.+.+|....  .+.+..+..+++..+. .|+ ++....               ..+.+.+..+..++.+.+++|+.
T Consensus       272 ~svvyvsfGS~~~~~~~q~~ela~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~  350 (480)
T PLN00164        272 ASVVFLCFGSMGFFDAPQVREIAAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQK  350 (480)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHH
Confidence            4456677776522  2336777777776654 443 433211               11122333344467777888776


Q ss_pred             hHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC-------CCHHHHHH
Q 022615          152 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP-------GDLDDCLS  220 (294)
Q Consensus       152 ~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~-------~d~~~l~~  220 (294)
                      +   +++..++..+-+.  +.-++++|++++|+|+|+.+..    .....+-  +.-+.|+.+..       -+.+++.+
T Consensus       351 ~---iL~h~~vg~fvtH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvG~~~~~~~~~~~~~~~e~l~~  423 (480)
T PLN00164        351 E---ILAHAAVGGFVTH--CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELV--ADMGVAVAMKVDRKRDNFVEAAELER  423 (480)
T ss_pred             H---HhcCcccCeEEee--cccchHHHHHHcCCCEEeCCccccchhHHHHHH--HHhCeEEEeccccccCCcCcHHHHHH
Confidence            5   5666775444442  3346789999999999986543    2222220  22355555421       26789999


Q ss_pred             HHHHHhhChH-HHHHHHHHHHH
Q 022615          221 KLEPLLYNQE-LRETMGQAARQ  241 (294)
Q Consensus       221 ~i~~ll~~~~-~~~~~~~~~~~  241 (294)
                      +|.+++.+++ +.+++++++++
T Consensus       424 av~~vm~~~~~~~~~~r~~a~~  445 (480)
T PLN00164        424 AVRSLMGGGEEEGRKAREKAAE  445 (480)
T ss_pred             HHHHHhcCCchhHHHHHHHHHH
Confidence            9999997643 23444444433

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=97.56  E-value=0.027  Score=49.92  Aligned_cols=134  Identities=13%  Similarity=0.059  Sum_probs=82.1

Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcC---C---------------c-----cHHHHHhhhcCCCeE
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGD---G---------------P-----YREELEKMFTGMPAV  143 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~---~---------------~-----~~~~~~~~~~~~~v~  143 (294)
                      ++..+.+.+|....  .+....+..+++..+.--+..+..   +               .     ..+.+.+..+..++.
T Consensus       262 ~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~v  341 (481)
T PLN02992        262 NESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFV  341 (481)
T ss_pred             CCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEE
Confidence            45567778887633  445677788888887633333310   0               0     112233344455788


Q ss_pred             EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCC----CCH
Q 022615          144 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP----GDL  215 (294)
Q Consensus       144 ~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~----~d~  215 (294)
                      +.+++|+.+   +++...+..+-+  .+.-++++|++.+|+|+|+.+..+    ....+.  +.-+.|..++.    -+.
T Consensus       342 v~~W~PQ~~---iL~h~~vg~Fit--H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~~~  414 (481)
T PLN02992        342 VPSWAPQAE---ILAHQAVGGFLT--HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLS--DELGIAVRSDDPKEVISR  414 (481)
T ss_pred             EeecCCHHH---HhCCcccCeeEe--cCchhHHHHHHHcCCCEEecCccchhHHHHHHHH--HHhCeeEEecCCCCcccH
Confidence            899998766   566666644333  244568999999999999975432    222320  12345555532    377


Q ss_pred             HHHHHHHHHHhhCh
Q 022615          216 DDCLSKLEPLLYNQ  229 (294)
Q Consensus       216 ~~l~~~i~~ll~~~  229 (294)
                      +++.++|.+++.++
T Consensus       415 ~~l~~av~~vm~~~  428 (481)
T PLN02992        415 SKIEALVRKVMVEE  428 (481)
T ss_pred             HHHHHHHHHHhcCC
Confidence            89999999999764

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=97.55  E-value=0.0026  Score=53.35  Aligned_cols=180  Identities=17%  Similarity=0.197  Sum_probs=103.1

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCC-CCCccchHHHHHhhcCCCCCceEEEeecc--cc-
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRSSEMRWRLSNGEPDKPLIVHVGRL--GV-  102 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~G~~--~~-  102 (294)
                      .+..+..||.++++.-.-...+... |.. +++. -++|++.-.+ ++..+......+.+ ..++..+++=...+  .. 
T Consensus       119 ~~Lt~Pla~~i~~P~~~~~~~~~~~-G~~-~~i~-~y~G~~E~ayl~~F~Pd~~vl~~lg-~~~~~yIvvR~~~~~A~y~  194 (335)
T PF04007_consen  119 NRLTLPLADVIITPEAIPKEFLKRF-GAK-NQIR-TYNGYKELAYLHPFKPDPEVLKELG-LDDEPYIVVRPEAWKASYD  194 (335)
T ss_pred             ceeehhcCCeeECCcccCHHHHHhc-CCc-CCEE-EECCeeeEEeecCCCCChhHHHHcC-CCCCCEEEEEeccccCeee
Confidence            4556778999999887666665554 332 2232 2667664322 23233344445554 23444444422222  11 


Q ss_pred             --ccc-HHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          103 --EKS-LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       103 --~k~-~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                        .++ +..+++.+++..+. ++++........   +.+..++.+....  -+..+++..||++|.-     .|+...||
T Consensus       195 ~~~~~i~~~ii~~L~~~~~~-vV~ipr~~~~~~---~~~~~~~~i~~~~--vd~~~Ll~~a~l~Ig~-----ggTMa~EA  263 (335)
T PF04007_consen  195 NGKKSILPEIIEELEKYGRN-VVIIPRYEDQRE---LFEKYGVIIPPEP--VDGLDLLYYADLVIGG-----GGTMAREA  263 (335)
T ss_pred             cCccchHHHHHHHHHhhCce-EEEecCCcchhh---HHhccCccccCCC--CCHHHHHHhcCEEEeC-----CcHHHHHH
Confidence              111 34455555555444 666654433222   2233344333322  3566899999999844     37888999


Q ss_pred             HhcCCCEEeecCC---CcccccccCCCCcceeecCCCCHHHHHHHHHHHh
Q 022615          180 MSSGIPVVGVRAG---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  226 (294)
Q Consensus       180 ~a~G~pvI~~~~~---~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll  226 (294)
                      ...|+|.|.+-.+   +..+++     .+.|+++...|++++.+.+...+
T Consensus       264 A~LGtPaIs~~~g~~~~vd~~L-----~~~Gll~~~~~~~ei~~~v~~~~  308 (335)
T PF04007_consen  264 ALLGTPAISCFPGKLLAVDKYL-----IEKGLLYHSTDPDEIVEYVRKNL  308 (335)
T ss_pred             HHhCCCEEEecCCcchhHHHHH-----HHCCCeEecCCHHHHHHHHHHhh
Confidence            9999999986433   334444     34578888889999998666654

They are found in archaea and some bacteria and have no known function.

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=97.53  E-value=0.0023  Score=58.43  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=86.5

Q ss_pred             CCCceEEEeecccccccHHHHHH----HHHhC-----CCcEEEEEcCC-c---cHHHHHhhhc--------CCCeEEEec
Q 022615           89 PDKPLIVHVGRLGVEKSLDFLKR----VMDRL-----PEARIAFIGDG-P---YREELEKMFT--------GMPAVFTGM  147 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~~~l~~----~~~~~-----~~~~l~i~G~~-~---~~~~~~~~~~--------~~~v~~~g~  147 (294)
                      ++...++++-|+..+|...+.+.    +...+     |.+.+++.|.. |   ..+.+.+++.        ..+|.|+..
T Consensus       485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~n  564 (750)
T COG0058         485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPN  564 (750)
T ss_pred             CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCC
Confidence            46778899999999998654432    22222     33555666742 1   1122222221        235788877


Q ss_pred             ccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCC
Q 022615          148 LLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP  212 (294)
Q Consensus       148 ~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~  212 (294)
                      .+-.-...++..||+-...|.  .|+.|++-+-++..|.+.|+|-.|...|+... -.+.+|++|-.
T Consensus       565 YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~-vg~~N~~~fG~  630 (750)
T COG0058         565 YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEH-VGGENGWIFGE  630 (750)
T ss_pred             CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHh-cCCCceEEeCC
Confidence            766667789999999998765  79999999999999999999999998888821 17889998864

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.51  E-value=0.0028  Score=51.34  Aligned_cols=189  Identities=15%  Similarity=0.146  Sum_probs=111.0

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccC-CCCCCCccchHHHHHhhcCCCCCceEEEeec-----
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDS-ESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----   99 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~-----   99 (294)
                      -.+.++..||.+++++..-.+.+...+. .+.++ +-.||+-. ..........+...+.+...++..+++=.-.     
T Consensus       119 qnkl~~Pla~~ii~P~~~~~~~~~~~G~-~p~~i-~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y  196 (346)
T COG1817         119 QNKLTLPLADVIITPEAIDEEELLDFGA-DPNKI-SGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEPWGAHY  196 (346)
T ss_pred             HhhcchhhhhheecccccchHHHHHhCC-Cccce-ecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeecccccee
Confidence            3677888999999999887777776554 33333 23444321 1111122334555566554444555553332     


Q ss_pred             ccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          100 LGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      ....++.+.+.++++.+++.-.+++-....   .++..+..++..... +--|-.+++-.|++++-     +.|+..-||
T Consensus       197 ~~g~~~~~~~~~li~~l~k~giV~ipr~~~---~~eife~~~n~i~pk-~~vD~l~Llyya~lvig-----~ggTMarEa  267 (346)
T COG1817         197 DNGDRGISVLPDLIKELKKYGIVLIPREKE---QAEIFEGYRNIIIPK-KAVDTLSLLYYATLVIG-----AGGTMAREA  267 (346)
T ss_pred             eccccchhhHHHHHHHHHhCcEEEecCchh---HHHHHhhhccccCCc-ccccHHHHHhhhheeec-----CCchHHHHH
Confidence            244556666777777776655666654322   223333332221111 11233357778888873     347778999


Q ss_pred             HhcCCCEEeecCC---CcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChH
Q 022615          180 MSSGIPVVGVRAG---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       180 ~a~G~pvI~~~~~---~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~  230 (294)
                      ...|+|.|+..-|   +..++.     -..|.++...|+.+..+...+.+.++.
T Consensus       268 AlLGtpaIs~~pGkll~vdk~l-----ie~G~~~~s~~~~~~~~~a~~~l~~~~  316 (346)
T COG1817         268 ALLGTPAISCYPGKLLAVDKYL-----IEKGLLYHSTDEIAIVEYAVRNLKYRR  316 (346)
T ss_pred             HHhCCceEEecCCccccccHHH-----HhcCceeecCCHHHHHHHHHHHhhchh
Confidence            9999999988633   344444     457788887788888888877776654

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=97.48  E-value=0.0021  Score=54.27  Aligned_cols=149  Identities=14%  Similarity=0.128  Sum_probs=88.8

Q ss_pred             eeccccCCCcccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCC
Q 022615            9 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE   88 (294)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~   88 (294)
                      +|++..-|.|..+.    .+.+.+.+|.+++.-.+..+.+    +.   ++.++.|++-.. ..+.  ..    .   ..
T Consensus       107 yyi~PqvWAWr~~R----~~~i~k~~d~vl~ifPFE~~~y----g~---~~~~VGhPl~d~-~~~~--~~----~---~~  165 (347)
T PRK14089        107 YYILPQVWAWKKGR----AKILEKYCDFLASILPFEVQFY----QS---KATYVGHPLLDE-IKEF--KK----D---LD  165 (347)
T ss_pred             EEECccceeeCcch----HHHHHHHHhhhhccCCCCHHHh----CC---CCEEECCcHHHh-hhhh--hh----h---cC
Confidence            45555556665553    4456677788888776666665    22   566778775322 1110  00    0   12


Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCC--cEEEEEcCCccHHHHHhhhcCC-CeEEEecccchhHHHHHhcCCEE
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVF  163 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~--~~l~i~G~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~  163 (294)
                      ++..+.++.|+-..  .+.+..++++++.+.+  ..+++.|.... +.+++...+. .+.+.     ++..++|+.||++
T Consensus       166 ~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~-~~i~~~~~~~~~~~~~-----~~~~~~m~~aDla  239 (347)
T PRK14089        166 KEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKG-KDLKEIYGDISEFEIS-----YDTHKALLEAEFA  239 (347)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcH-HHHHHHHhcCCCcEEe-----ccHHHHHHhhhHH
Confidence            23445556665422  2345556677776643  56677775433 5555544332 33333     2567899999999


Q ss_pred             EeecCCCCcchHHHHHHhcCCCEEee
Q 022615          164 VMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       164 l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      +..|     |+..+|++.+|+|.|..
T Consensus       240 l~~S-----GT~TLE~al~g~P~Vv~  260 (347)
T PRK14089        240 FICS-----GTATLEAALIGTPFVLA  260 (347)
T ss_pred             HhcC-----cHHHHHHHHhCCCEEEE
Confidence            9887     88888999999998764

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.45  E-value=0.0015  Score=52.15  Aligned_cols=138  Identities=10%  Similarity=0.118  Sum_probs=80.5

Q ss_pred             CCceEEEeecccccccHHHHHHHHHhCCCcEEEEE-cC-CccHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEee
Q 022615           90 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI-GD-GPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~-G~-~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      .+-+++..|.-++..-.-.++..+.+.+ +.+.|+ |. .+....+++.... .++.++-..  ++|.++|..||+.+..
T Consensus       158 ~r~ilI~lGGsDpk~lt~kvl~~L~~~~-~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~--~dma~LMke~d~aI~A  234 (318)
T COG3980         158 KRDILITLGGSDPKNLTLKVLAELEQKN-VNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDT--NDMAELMKEADLAISA  234 (318)
T ss_pred             hheEEEEccCCChhhhHHHHHHHhhccC-eeEEEEecCCCcchhHHHHHHhhCCCeeeEecc--hhHHHHHHhcchheec
Confidence            4446777777666433333334433333 555444 53 2444555555443 356665554  9999999999999865


Q ss_pred             cCCCCcchHHHHHHhcCCC--EEe--ecCCCcccccccCCCCcceeecCC---CCHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          167 SESETLGLVVLEAMSSGIP--VVG--VRAGGIPDIIPEDQDGKIGYLFNP---GDLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~p--vI~--~~~~~~~e~~~~~~~~~~g~~~~~---~d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      .     |.++.|++..|+|  +|+  .+.......+     ..-|+....   -........+.++..|...++.+....
T Consensus       235 a-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f-----~~lg~~~~l~~~l~~~~~~~~~~~i~~d~~~rk~l~~~~  304 (318)
T COG3980         235 A-----GSTLYEALLLGVPSLVLPLAENQIATAKEF-----EALGIIKQLGYHLKDLAKDYEILQIQKDYARRKNLSFGS  304 (318)
T ss_pred             c-----chHHHHHHHhcCCceEEeeeccHHHHHHHH-----HhcCchhhccCCCchHHHHHHHHHhhhCHHHhhhhhhcc
Confidence            4     8899999999999  332  3333333333     112222211   234566667777777877666655444


Q ss_pred             H
Q 022615          240 R  240 (294)
Q Consensus       240 ~  240 (294)
                      +
T Consensus       305 ~  305 (318)
T COG3980         305 K  305 (318)
T ss_pred             c
Confidence            3

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.45  E-value=0.0061  Score=53.47  Aligned_cols=143  Identities=10%  Similarity=0.111  Sum_probs=80.8

Q ss_pred             CCCceEEEeecccccccHHHHHHHHHhCCCcEEEEEcC-C---ccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEE
Q 022615           89 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGD-G---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~-~---~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      ++..+.+.+|.... -..+.+.+++..+.+..|+++=. +   ...+.+.+.....++.+.+++|+.+   +++...+..
T Consensus       263 ~~svvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~---iL~H~~v~~  338 (449)
T PLN02173        263 QGSVVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQ---VLSNKAIGC  338 (449)
T ss_pred             CCceEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHH---HhCCCccce
Confidence            34467778887642 22233444443343333433321 1   1112233333345788889998655   677777655


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCC-cceeecCC------CCHHHHHHHHHHHhhChHHHH
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDG-KIGYLFNP------GDLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~-~~g~~~~~------~d~~~l~~~i~~ll~~~~~~~  233 (294)
                      +-+.  +..++++|++++|+|+|+.+..    ....++   .+. +.|+-+..      -+.+++.+++++++.+++ .+
T Consensus       339 FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~-~~  412 (449)
T PLN02173        339 FMTH--CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYI---QDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEK-SK  412 (449)
T ss_pred             EEec--CccchHHHHHHcCCCEEecCchhcchHHHHHH---HHHhCceEEEeecccCCcccHHHHHHHHHHHhcCCh-HH
Confidence            5543  4457899999999999997543    223333   221 34544421      167999999999997643 24


Q ss_pred             HHHHHHHH
Q 022615          234 TMGQAARQ  241 (294)
Q Consensus       234 ~~~~~~~~  241 (294)
                      ++++++++
T Consensus       413 ~~r~~a~~  420 (449)
T PLN02173        413 EMKENAGK  420 (449)
T ss_pred             HHHHHHHH
Confidence            44444443

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.42  E-value=0.0096  Score=52.77  Aligned_cols=163  Identities=15%  Similarity=0.096  Sum_probs=88.3

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCCc--------cHHHHHhhhcCCCeEEEecccchhHHHHHhc
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP--------YREELEKMFTGMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~~--------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      ...+.+.+|....  ...+..+..+++..+.--+..++...        ....+.+.....++.+.+++|+.+   ++..
T Consensus       283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~---vL~h  359 (477)
T PLN02863        283 HKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVA---ILSH  359 (477)
T ss_pred             CceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHH---HhcC
Confidence            4556777787632  23466777777776543344444211        112233333445788889998754   5666


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecC-----CCCHHHHHHHHHHHhh-Ch
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPLLY-NQ  229 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~-----~~d~~~l~~~i~~ll~-~~  229 (294)
                      ..+..+-+.  +.-++++||+++|+|+|+.+..    .....+.  +.-+.|+-+.     .-+.+++.+++.+++. ++
T Consensus       360 ~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~--~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~  435 (477)
T PLN02863        360 RAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLV--DELKVAVRVCEGADTVPDSDELARVFMESVSENQ  435 (477)
T ss_pred             CCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHH--HhhceeEEeccCCCCCcCHHHHHHHHHHHhhccH
Confidence            444333332  3456889999999999986543    2323220  1224554442     1267899999998874 33


Q ss_pred             HHH---HHHHHHHHHHHHh-CCHHHHHHHHHHHH
Q 022615          230 ELR---ETMGQAARQEMEK-YDWRAATRTIRNEQ  259 (294)
Q Consensus       230 ~~~---~~~~~~~~~~~~~-~s~~~~~~~~~~~l  259 (294)
                      +.+   +++++.+++.+.+ =|..+..+++++.+
T Consensus       436 ~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i  469 (477)
T PLN02863        436 VERERAKELRRAALDAIKERGSSVKDLDGFVKHV  469 (477)
T ss_pred             HHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence            322   2333333333322 34444445555443

>PLN02207 UDP-glycosyltransferase

Probab=97.36  E-value=0.039  Score=48.73  Aligned_cols=131  Identities=10%  Similarity=0.024  Sum_probs=74.6

Q ss_pred             CCCceEEEeeccc--ccccHHHHHHHHHhCCCcEEEEEcCCcc------HHHHHhhhcCCCeEEEecccchhHHHHHhcC
Q 022615           89 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDGPY------REELEKMFTGMPAVFTGMLLGEELSQAYASG  160 (294)
Q Consensus        89 ~~~~~i~~~G~~~--~~k~~~~l~~~~~~~~~~~l~i~G~~~~------~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a  160 (294)
                      +...+.+.+|...  ..+.+..+..+++..+.--+..+.....      .+.+.+... .+..+.+++|+.++   ++..
T Consensus       274 ~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~-~~g~i~~W~PQ~~I---L~H~  349 (468)
T PLN02207        274 EASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVS-GRGMICGWSPQVEI---LAHK  349 (468)
T ss_pred             CCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcC-CCeEEEEeCCHHHH---hccc
Confidence            3456777778663  2344677778888776533333332111      122222222 35566799888775   4555


Q ss_pred             CEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeec---------CCCCHHHHHHHHHHHhh
Q 022615          161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLF---------NPGDLDDCLSKLEPLLY  227 (294)
Q Consensus       161 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~---------~~~d~~~l~~~i~~ll~  227 (294)
                      .+..+-+.  +.-++++||+.+|+|+|+.+..    ....++.  +..+.|+-+         ..-+.+++.++|++++.
T Consensus       350 ~vg~FvTH--~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        350 AVGGFVSH--CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMV--KELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             ccceeeec--CccccHHHHHHcCCCEEecCccccchhhHHHHH--HHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence            55433332  3345789999999999997543    2222220  113344422         11267899999999996

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=97.36  E-value=0.0079  Score=52.84  Aligned_cols=132  Identities=14%  Similarity=0.101  Sum_probs=78.6

Q ss_pred             CCceEEEeeccc--ccccHHHHHHHHHhCCCcEEEEEcCC---------cc------HHHHHhhhcCCCeEEEecccchh
Q 022615           90 DKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDG---------PY------REELEKMFTGMPAVFTGMLLGEE  152 (294)
Q Consensus        90 ~~~~i~~~G~~~--~~k~~~~l~~~~~~~~~~~l~i~G~~---------~~------~~~~~~~~~~~~v~~~g~~~~~~  152 (294)
                      +..+.+.+|.+.  ..+....+..+++..+.--+..+...         ..      .+.+.+.. ..+..+.+++|+.+
T Consensus       261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~-~~~g~v~~W~PQ~~  339 (455)
T PLN02152        261 SSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL-EEVGMIVSWCSQIE  339 (455)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhc-cCCeEEEeeCCHHH
Confidence            456777788763  34556778888888876333334321         10      01111112 23556778987655


Q ss_pred             HHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCC-CcceeecC-----CCCHHHHHHHH
Q 022615          153 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQD-GKIGYLFN-----PGDLDDCLSKL  222 (294)
Q Consensus       153 ~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~-~~~g~~~~-----~~d~~~l~~~i  222 (294)
                         +++..++..+-+.  +..++++|++.+|+|+|+.+..    .....+   .+ -+.|+-+.     .-+.+++.+++
T Consensus       340 ---iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~~~e~l~~av  411 (455)
T PLN02152        340 ---VLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLL---EEIWKTGVRVRENSEGLVERGEIRRCL  411 (455)
T ss_pred             ---HhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHH---HHHhCceEEeecCcCCcCcHHHHHHHH
Confidence               6777777555543  3456899999999999986542    222222   11 12343332     12678999999


Q ss_pred             HHHhhChH
Q 022615          223 EPLLYNQE  230 (294)
Q Consensus       223 ~~ll~~~~  230 (294)
                      .+++.++.
T Consensus       412 ~~vm~~~~  419 (455)
T PLN02152        412 EAVMEEKS  419 (455)
T ss_pred             HHHHhhhH
Confidence            99997543

>PLN02764 glycosyltransferase family protein

Probab=97.34  E-value=0.0061  Score=53.42  Aligned_cols=164  Identities=13%  Similarity=0.079  Sum_probs=88.9

Q ss_pred             CCCCCceEEEeecccc--cccHHHHHHHHHhC-CCcEEEEEc-CC------ccHHHHHhhhcCCCeEEEecccchhHHHH
Q 022615           87 GEPDKPLIVHVGRLGV--EKSLDFLKRVMDRL-PEARIAFIG-DG------PYREELEKMFTGMPAVFTGMLLGEELSQA  156 (294)
Q Consensus        87 ~~~~~~~i~~~G~~~~--~k~~~~l~~~~~~~-~~~~l~i~G-~~------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~  156 (294)
                      ..++..+.+.+|....  .+.+..+...++.- ..+..++-. .+      ...+.+++..+..++.+.+++|+.++   
T Consensus       254 q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~v---  330 (453)
T PLN02764        254 YEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLI---  330 (453)
T ss_pred             CCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHH---
Confidence            3445667788888733  33344444443322 123333331 11      11122333334446788899988774   


Q ss_pred             HhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecC-----CCCHHHHHHHHHHHhh
Q 022615          157 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPLLY  227 (294)
Q Consensus       157 ~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~-----~~d~~~l~~~i~~ll~  227 (294)
                      ++...+..+-+  .+.-++++|++.+|+|+|+.+...    ....+.  +..+.|+.+.     .-+.+++.+++++++.
T Consensus       331 L~h~~v~~Fvt--H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~--~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~  406 (453)
T PLN02764        331 LSHPSVGCFVS--HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLS--DELKVSVEVAREETGWFSKESLRDAINSVMK  406 (453)
T ss_pred             hcCcccCeEEe--cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHH--HHhceEEEeccccCCccCHHHHHHHHHHHhc
Confidence            55554433333  244578999999999999976532    222330  1234454432     1378999999999997


Q ss_pred             Ch-HHHHHHHHHHHHH---HHh-CCHHHHHHHHHH
Q 022615          228 NQ-ELRETMGQAARQE---MEK-YDWRAATRTIRN  257 (294)
Q Consensus       228 ~~-~~~~~~~~~~~~~---~~~-~s~~~~~~~~~~  257 (294)
                      ++ +..+++++++++.   +.+ =|.....+++++
T Consensus       407 ~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~  441 (453)
T PLN02764        407 RDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIE  441 (453)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            64 4445555555544   322 344445555553

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.33  E-value=0.0031  Score=55.36  Aligned_cols=133  Identities=16%  Similarity=0.131  Sum_probs=77.7

Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCC----c-----cHHHHHhhhcCCCeEEEecccchhHHHHH
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG----P-----YREELEKMFTGMPAVFTGMLLGEELSQAY  157 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~----~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~  157 (294)
                      ++..+.+.+|....  .+.+..+..+++..+.--+.++..+    .     ..+.+.+... .+..+.+++|+.+   ++
T Consensus       263 ~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~-~~g~v~~w~PQ~~---iL  338 (451)
T PLN02410        263 KNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIIS-GRGYIVKWAPQKE---VL  338 (451)
T ss_pred             CCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhcc-CCeEEEccCCHHH---Hh
Confidence            45667778887642  3345556666776655333333321    1     1222333332 3566778988876   56


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCC-cceeec-CCCCHHHHHHHHHHHhhChH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLF-NPGDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~-~~g~~~-~~~d~~~l~~~i~~ll~~~~  230 (294)
                      +..++..+-+.  +.-++++||+++|+|+|+.+..+    ....+   .+. +.|+.+ ..-+.++++++|++++.+++
T Consensus       339 ~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~v~~av~~lm~~~~  412 (451)
T PLN02410        339 SHPAVGGFWSH--CGWNSTLESIGEGVPMICKPFSSDQKVNARYL---ECVWKIGIQVEGDLDRGAVERAVKRLMVEEE  412 (451)
T ss_pred             CCCccCeeeec--CchhHHHHHHHcCCCEEeccccccCHHHHHHH---HHHhCeeEEeCCcccHHHHHHHHHHHHcCCc
Confidence            66555433332  33468899999999999875532    22222   111 455444 23378899999999997653

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.33  E-value=0.039  Score=49.14  Aligned_cols=131  Identities=10%  Similarity=0.073  Sum_probs=74.9

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEE-cCC----------c--c-----HHHHHhhhcCCCeEEEeccc
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDG----------P--Y-----REELEKMFTGMPAVFTGMLL  149 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~-G~~----------~--~-----~~~~~~~~~~~~v~~~g~~~  149 (294)
                      ...+.+.+|.+..  .+.+..+..+++..+. +|++. +..          .  .     .+.+.+.. ..++.+.+++|
T Consensus       274 ~svvyvsfGS~~~~~~~~~~~la~~l~~~~~-~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~-~~~g~v~~W~P  351 (481)
T PLN02554        274 KSVVFLCFGSMGGFSEEQAREIAIALERSGH-RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRT-KDIGKVIGWAP  351 (481)
T ss_pred             CcEEEEeccccccCCHHHHHHHHHHHHHcCC-CeEEEEcCCcccccccccccccchhhhCChHHHHHh-ccCceEEeeCC
Confidence            3456778887632  3457777888887764 44433 210          0  0     11122222 23566678988


Q ss_pred             chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cc-cccccCCCCcceeecC-------------
Q 022615          150 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IP-DIIPEDQDGKIGYLFN-------------  211 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~-e~~~~~~~~~~g~~~~-------------  211 (294)
                      +.+   +++...+..+-+  .+.-++++|++.+|+|+|+.+..+    .. ..+   +.-+.|..+.             
T Consensus       352 Q~~---iL~H~~v~~Fvt--H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v---~~~g~Gv~l~~~~~~~~~~~~~~  423 (481)
T PLN02554        352 QVA---VLAKPAIGGFVT--HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMV---EELGLAVEIRKYWRGDLLAGEME  423 (481)
T ss_pred             HHH---HhCCcccCcccc--cCccchHHHHHHcCCCEEecCccccchhhHHHHH---HHhCceEEeeccccccccccccC
Confidence            665   454444433333  233568999999999999975432    22 122   2234454442             


Q ss_pred             CCCHHHHHHHHHHHhh-ChH
Q 022615          212 PGDLDDCLSKLEPLLY-NQE  230 (294)
Q Consensus       212 ~~d~~~l~~~i~~ll~-~~~  230 (294)
                      .-+.+++.++|.+++. +++
T Consensus       424 ~~~~e~l~~av~~vm~~~~~  443 (481)
T PLN02554        424 TVTAEEIERGIRCLMEQDSD  443 (481)
T ss_pred             eEcHHHHHHHHHHHhcCCHH
Confidence            1268899999999996 443

>PLN03015 UDP-glucosyl transferase

Probab=97.18  E-value=0.077  Score=46.86  Aligned_cols=133  Identities=13%  Similarity=0.047  Sum_probs=75.2

Q ss_pred             CCCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCC-----------c-----cHHHHHhhhcCCCeEEEeccc
Q 022615           88 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG-----------P-----YREELEKMFTGMPAVFTGMLL  149 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~-----------~-----~~~~~~~~~~~~~v~~~g~~~  149 (294)
                      .++..+.+.+|....  ......+..+++..+.--+..+...           .     ..+.+.+..+..++.+.+++|
T Consensus       265 ~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~P  344 (470)
T PLN03015        265 GERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAP  344 (470)
T ss_pred             CCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCC
Confidence            345566777787732  3446667777777765333333210           0     112233333344577889998


Q ss_pred             chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecC------CCCHHHHH
Q 022615          150 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN------PGDLDDCL  219 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~------~~d~~~l~  219 (294)
                      +.++.   +...+..+-+.  +.-++++|++++|+|+|+.+..+    ....+.  +..+.|+-+.      .-+.+++.
T Consensus       345 Q~~vL---~h~~vg~fvtH--~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~--~~~gvg~~~~~~~~~~~v~~e~i~  417 (470)
T PLN03015        345 QVEIL---SHRSIGGFLSH--CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT--EEIGVAVRTSELPSEKVIGREEVA  417 (470)
T ss_pred             HHHHh---ccCccCeEEec--CCchhHHHHHHcCCCEEecccccchHHHHHHHH--HHhCeeEEecccccCCccCHHHHH
Confidence            87754   45555443332  33468899999999999975432    111110  1123343332      13678999


Q ss_pred             HHHHHHhh
Q 022615          220 SKLEPLLY  227 (294)
Q Consensus       220 ~~i~~ll~  227 (294)
                      ++|+.++.
T Consensus       418 ~~v~~lm~  425 (470)
T PLN03015        418 SLVRKIVA  425 (470)
T ss_pred             HHHHHHHc
Confidence            99999985

>PLN02167 UDP-glycosyltransferase family protein

Probab=97.06  E-value=0.027  Score=50.09  Aligned_cols=158  Identities=15%  Similarity=0.125  Sum_probs=84.7

Q ss_pred             CCceEEEeeccc--ccccHHHHHHHHHhCCCcEEE-EEcCCc---------cHHHHHhhhcCCCeEEEecccchhHHHHH
Q 022615           90 DKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIA-FIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAY  157 (294)
Q Consensus        90 ~~~~i~~~G~~~--~~k~~~~l~~~~~~~~~~~l~-i~G~~~---------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~  157 (294)
                      +..+.+.+|.+.  ..+.+..+..+++..+. .|+ .++...         ..+.+.+..+. +..+.+++|+.+   ++
T Consensus       280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~~-~flw~~~~~~~~~~~~~~~lp~~~~er~~~-rg~v~~w~PQ~~---iL  354 (475)
T PLN02167        280 SSVVFLCFGSLGSLPAPQIKEIAQALELVGC-RFLWSIRTNPAEYASPYEPLPEGFMDRVMG-RGLVCGWAPQVE---IL  354 (475)
T ss_pred             CceEEEeecccccCCHHHHHHHHHHHHhCCC-cEEEEEecCcccccchhhhCChHHHHHhcc-CeeeeccCCHHH---Hh
Confidence            445667778763  23446677777777654 444 343211         11122222222 235568887665   56


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----Ccccc-cccCCCCcceeecC---------CCCHHHHHHHHH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDI-IPEDQDGKIGYLFN---------PGDLDDCLSKLE  223 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~-~~~~~~~~~g~~~~---------~~d~~~l~~~i~  223 (294)
                      +...+..+-+.  +.-++++||+++|+|+|+.+..    ..... +   +.-+.|+.+.         .-+.+++.++|.
T Consensus       355 ~h~~vg~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~---~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~  429 (475)
T PLN02167        355 AHKAIGGFVSH--CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV---KELGLAVELRLDYVSAYGEIVKADEIAGAVR  429 (475)
T ss_pred             cCcccCeEEee--CCcccHHHHHHcCCCEEeccccccchhhHHHHH---HHhCeeEEeecccccccCCcccHHHHHHHHH
Confidence            66554333322  3345788999999999987543    22211 2   2234555442         126789999999


Q ss_pred             HHhhChH----HHHHHHHHHHHHHHh-CCHHHHHHHHHH
Q 022615          224 PLLYNQE----LRETMGQAARQEMEK-YDWRAATRTIRN  257 (294)
Q Consensus       224 ~ll~~~~----~~~~~~~~~~~~~~~-~s~~~~~~~~~~  257 (294)
                      +++.+++    ..+++++.+++.+.+ =|.....+++++
T Consensus       430 ~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~  468 (475)
T PLN02167        430 SLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFID  468 (475)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            9997542    223344444444433 333344444443

>PLN00414 glycosyltransferase family protein

Probab=97.02  E-value=0.015  Score=51.01  Aligned_cols=149  Identities=11%  Similarity=0.072  Sum_probs=84.2

Q ss_pred             CCCCCceEEEeeccccc--ccHHHHHHHHHhCCCcEE--EEE---cCC----ccHHHHHhhhcCCCeEEEecccchhHHH
Q 022615           87 GEPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARI--AFI---GDG----PYREELEKMFTGMPAVFTGMLLGEELSQ  155 (294)
Q Consensus        87 ~~~~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l--~i~---G~~----~~~~~~~~~~~~~~v~~~g~~~~~~~~~  155 (294)
                      ..++..+.+.+|.....  +.+..+...++. .+..|  ++.   |.+    ...+.+++..+..+..+.+++|+.+   
T Consensus       249 q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~-s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~---  324 (446)
T PLN00414        249 FEPGSVVFCAFGTQFFFEKDQFQEFCLGMEL-TGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPL---  324 (446)
T ss_pred             CCCCceEEEeecccccCCHHHHHHHHHHHHH-cCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHH---
Confidence            34455677788877433  223333333332 23333  232   111    1223455555555677789998776   


Q ss_pred             HHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCCcceeecCC-----CCHHHHHHHHHHHh
Q 022615          156 AYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP-----GDLDDCLSKLEPLL  226 (294)
Q Consensus       156 ~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~~~g~~~~~-----~d~~~l~~~i~~ll  226 (294)
                      +++.+.+..+-+.  +.-++++||+++|+|+|+.+..    ....++.  +..+.|+.+..     -+.+++.+++++++
T Consensus       325 vL~h~~v~~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~--~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m  400 (446)
T PLN00414        325 ILSHPSVGCFVNH--CGFGSMWESLVSDCQIVFIPQLADQVLITRLLT--EELEVSVKVQREDSGWFSKESLRDTVKSVM  400 (446)
T ss_pred             HhcCCccceEEec--CchhHHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCeEEEeccccCCccCHHHHHHHHHHHh
Confidence            4556644333332  3457899999999999987543    2222330  12355555531     37889999999999


Q ss_pred             hCh-HHHHHHHHHHHHHH
Q 022615          227 YNQ-ELRETMGQAARQEM  243 (294)
Q Consensus       227 ~~~-~~~~~~~~~~~~~~  243 (294)
                      .++ +..+++++++++.-
T Consensus       401 ~~~~e~g~~~r~~a~~~~  418 (446)
T PLN00414        401 DKDSEIGNLVKRNHKKLK  418 (446)
T ss_pred             cCChhhHHHHHHHHHHHH
Confidence            764 34555666665543

>PLN02534 UDP-glycosyltransferase

Probab=96.82  E-value=0.079  Score=47.17  Aligned_cols=132  Identities=16%  Similarity=0.120  Sum_probs=75.0

Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCC---cc------HHHHHhhhcCCCeEEEecccchhHHHHH
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG---PY------REELEKMFTGMPAVFTGMLLGEELSQAY  157 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~---~~------~~~~~~~~~~~~v~~~g~~~~~~~~~~~  157 (294)
                      +...+.+.+|....  .+....+..+++..+.--+..+...   ..      .+.+.+.....++.+.+++|+.+   ++
T Consensus       282 ~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~---iL  358 (491)
T PLN02534        282 PRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVL---IL  358 (491)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHH---Hh
Confidence            34567777787632  2334555577777755333333321   10      12223333445788889998754   67


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecC---------------CCCHHHH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN---------------PGDLDDC  218 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~---------------~~d~~~l  218 (294)
                      ...++..+-+  .+..++++||+++|+|+|+.+...    ....+.  +.-+.|+-+.               .-+.+++
T Consensus       359 ~h~~v~~fvt--H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~--e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev  434 (491)
T PLN02534        359 SHPAIGGFLT--HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIV--EVLRIGVRVGVEVPVRWGDEERVGVLVKKDEV  434 (491)
T ss_pred             cCCccceEEe--cCccHHHHHHHHcCCCEEeccccccHHHHHHHHH--HhhcceEEecccccccccccccccCccCHHHH
Confidence            7777754443  244678999999999999875531    111110  1112222110               1267899


Q ss_pred             HHHHHHHhh
Q 022615          219 LSKLEPLLY  227 (294)
Q Consensus       219 ~~~i~~ll~  227 (294)
                      ++++++++.
T Consensus       435 ~~~v~~~m~  443 (491)
T PLN02534        435 EKAVKTLMD  443 (491)
T ss_pred             HHHHHHHhc
Confidence            999999986

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=96.81  E-value=0.13  Score=44.30  Aligned_cols=222  Identities=10%  Similarity=0.101  Sum_probs=120.4

Q ss_pred             HHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHH-HHhh-cCCCCCceEEEeecccccc---
Q 022615           30 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR-WRLS-NGEPDKPLIVHVGRLGVEK---  104 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~-~~~~-~~~~~~~~i~~~G~~~~~k---  104 (294)
                      ...+.|.+++.+......+.+.++...+++.....+-....+.......... .+.. ..+.++.+|+|+-.+++..   
T Consensus       145 ~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~  224 (388)
T COG1887         145 VRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLI  224 (388)
T ss_pred             eeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCcccc
Confidence            3456788899888888888888887766666555544333333322222211 1222 2334678899999887765   


Q ss_pred             c---HHHH--HHHH-HhCC--CcEEEEEcCCccHHHHHhhhcCCCeEEEeccc-chhHHHHHhcCCEEEeecCCCCcchH
Q 022615          105 S---LDFL--KRVM-DRLP--EARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       105 ~---~~~l--~~~~-~~~~--~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      +   ....  +..+ +.+.  +..+++--................  +.-.++ ..++.++|..+|++|.-     ++..
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~~~~ii~k~Hp~is~~~~~~~~~~~--~~~~vs~~~di~dll~~sDiLITD-----ySSv  297 (388)
T COG1887         225 GTQFFNLDIDIEKLKEKLGENEYVIIVKPHPLISDKIDKRYALDD--FVLDVSDNADINDLLLVSDILITD-----YSSV  297 (388)
T ss_pred             chhhhhhhhhHHHHHHhhccCCeEEEEecChhhhhhhhhhhhccc--eeEecccchhHHHHHhhhCEEEee-----chHH
Confidence            2   2222  2222 2232  344444332211111111111111  122222 48999999999999854     3788


Q ss_pred             HHHHHhcCCCEEeec--CCC---cccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHH
Q 022615          176 VLEAMSSGIPVVGVR--AGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  250 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~--~~~---~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~  250 (294)
                      ++|+|...+|||-.-  ...   .+.+..+.+....|-++.  +..++.++|.....+.+...+........+..+.-..
T Consensus       298 ~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~  375 (388)
T COG1887         298 IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGR  375 (388)
T ss_pred             HHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhccccccc
Confidence            999999999999752  211   122221112344555555  7889999998887754433332332333333333345


Q ss_pred             HHHHHHHHHH
Q 022615          251 ATRTIRNEQY  260 (294)
Q Consensus       251 ~~~~~~~~l~  260 (294)
                      ..+++.+.++
T Consensus       376 ss~ri~~~i~  385 (388)
T COG1887         376 SSERILKLIF  385 (388)
T ss_pred             HHHHHHHHHh
Confidence            5555554433

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=96.77  E-value=0.081  Score=43.50  Aligned_cols=140  Identities=22%  Similarity=0.227  Sum_probs=81.9

Q ss_pred             HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccH--HH
Q 022615           31 HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL--DF  108 (294)
Q Consensus        31 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~--~~  108 (294)
                      -.+.|.++......+..+....-..+.++     |.+.........          ..-+..+++..|.-.+.|.+  +.
T Consensus        77 ~~~~D~vi~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~----------~~~~~~i~i~~~~~~~~k~w~~~~  141 (279)
T cd03789          77 RRRYDLAIDLQGSLRSALLPFLAGAPRRI-----GFDGERRRGLLT----------DVVKPVVVLPPGASGPAKRWPAER  141 (279)
T ss_pred             hcCCCEEEECCCccHHHHHHHHhCCCeEE-----EecCCccccccc----------cccCCEEEECCCCCCccccCCHHH
Confidence            44799999988777755533332111122     111111000000          01134566667766555543  45


Q ss_pred             HHHHHHhC--CCcEEEEEcCCccHHHHHhhhcC---CC-eEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          109 LKRVMDRL--PEARIAFIGDGPYREELEKMFTG---MP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       109 l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~---~~-v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      +.++++.+  .+++++++|...+.+..++....   .+ +.+.|..+-.++..+++.||++|.+.     +..+--|.+.
T Consensus       142 ~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~D-----sg~~HlA~a~  216 (279)
T cd03789         142 FAALADRLLARGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTND-----SGPMHLAAAL  216 (279)
T ss_pred             HHHHHHHHHHCCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeC-----CHHHHHHHHc
Confidence            55555544  26889999977666555554432   22 44667766799999999999999775     2334445799


Q ss_pred             CCCEEeec
Q 022615          183 GIPVVGVR  190 (294)
Q Consensus       183 G~pvI~~~  190 (294)
                      |+|+|+--
T Consensus       217 ~~p~i~l~  224 (279)
T cd03789         217 GTPTVALF  224 (279)
T ss_pred             CCCEEEEE
Confidence            99998753

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=96.73  E-value=0.0085  Score=52.83  Aligned_cols=152  Identities=13%  Similarity=0.124  Sum_probs=96.4

Q ss_pred             eEEEeecc-cccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecC-CC
Q 022615           93 LIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SE  170 (294)
Q Consensus        93 ~i~~~G~~-~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~e  170 (294)
                      ..+..|.- ...++-+..++++.+.-+++-.+.+.......+..     -|.-+|.++.+|+..+++.+.++|-... .|
T Consensus       279 ~AlVyGK~~~~w~~k~~~l~~l~~~~eih~tV~~~~~~~~~~P~-----~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E  353 (559)
T PF15024_consen  279 QALVYGKERYMWKGKEKYLDVLHKYMEIHGTVYDEPQRPPNVPS-----FVKNHGILSGDEFQQLLRKAKVFIGLGFPYE  353 (559)
T ss_pred             eeEEEccchhhhcCcHHHHHHHHhhcEEEEEeccCCCCCcccch-----hhhhcCcCCHHHHHHHHHhhhEeeecCCCCC
Confidence            33444433 33567777788887765555555543321111111     2566899999999999999999996543 33


Q ss_pred             CcchHHHHHHhcCCCEEeecCCC-----cccccc----------c------CCCCcceeecCCCCHHHHHHHHHHHhhCh
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGG-----IPDIIP----------E------DQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  229 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~-----~~e~~~----------~------~~~~~~g~~~~~~d~~~l~~~i~~ll~~~  229 (294)
                        |-+.+||+|.|+|.|-.....     ..+++.          +      ....-..+.++.+|.+++.++|++++.++
T Consensus       354 --gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~  431 (559)
T PF15024_consen  354 --GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATP  431 (559)
T ss_pred             --CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence              556899999999998764321     111121          0      01223456677889999999999998764


Q ss_pred             HHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 022615          230 ELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       230 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~  261 (294)
                      -         .-++ -+|+-+-+.+++. .+.+
T Consensus       432 v---------~Py~P~efT~egmLeRv~-~~ie  454 (559)
T PF15024_consen  432 V---------EPYLPYEFTCEGMLERVN-ALIE  454 (559)
T ss_pred             C---------CCcCCcccCHHHHHHHHH-HHHH
Confidence            2         1233 4688888888885 4443

>PRK14986 glycogen phosphorylase; Provisional

Probab=96.65  E-value=0.012  Score=54.60  Aligned_cols=122  Identities=16%  Similarity=0.201  Sum_probs=85.9

Q ss_pred             CCCCCceEEEeecccccccHHH-HHHHHHhC------C-----CcEEEEEcCC-c---cHHHHHhhh----c---C----
Q 022615           87 GEPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDG-P---YREELEKMF----T---G----  139 (294)
Q Consensus        87 ~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~------~-----~~~l~i~G~~-~---~~~~~~~~~----~---~----  139 (294)
                      ..++.+.++++-|+..+|...+ ++..+..+      |     ..++++.|.. |   ..+.+.+++    +   .    
T Consensus       539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v  618 (815)
T PRK14986        539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQI  618 (815)
T ss_pred             cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence            3456677888999999998776 54443222      2     3677777742 1   112222221    1   1    


Q ss_pred             ---CCeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCC--CcceeecC
Q 022615          140 ---MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFN  211 (294)
Q Consensus       140 ---~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~--~~~g~~~~  211 (294)
                         .+|.|+....-.--..++..||+....|.  .|+.|++-+-+|..|.+.+++-.|...|+.   +.  +.+|+++-
T Consensus       619 ~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~---e~vG~eN~~~fG  694 (815)
T PRK14986        619 GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML---EHVGEENIFIFG  694 (815)
T ss_pred             cCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHH---HhcCCCcEEEeC
Confidence               14777777655667789999999998765  789999999999999999999999888888   43  67888774

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=96.61  E-value=0.053  Score=44.33  Aligned_cols=97  Identities=20%  Similarity=0.182  Sum_probs=62.3

Q ss_pred             CCCceEEEeeccccc----------c-cHHHHHHHHHhCCCcEEEEEcCC-----ccHHHHHhhhcCCCeEEEecccchh
Q 022615           89 PDKPLIVHVGRLGVE----------K-SLDFLKRVMDRLPEARIAFIGDG-----PYREELEKMFTGMPAVFTGMLLGEE  152 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~----------k-~~~~l~~~~~~~~~~~l~i~G~~-----~~~~~~~~~~~~~~v~~~g~~~~~~  152 (294)
                      .++..|+++.....+          . ..+.+.++++..|+.+++|--..     .....+.+.....++.+..  +.-.
T Consensus       115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  192 (269)
T PF05159_consen  115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIID--DDVN  192 (269)
T ss_pred             CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEEC--CCCC
Confidence            455667777766443          1 23344445566688887765422     2223344443334444443  3368


Q ss_pred             HHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC
Q 022615          153 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  192 (294)
Q Consensus       153 ~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~  192 (294)
                      +.+++..||.++.-+     +++-+||+.+|+||++...+
T Consensus       193 ~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  193 LYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             HHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence            899999999998776     78899999999999986443

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.59  E-value=0.014  Score=53.30  Aligned_cols=123  Identities=18%  Similarity=0.211  Sum_probs=74.6

Q ss_pred             CCCCceEEEeecccccccHHH-HHHHH------HhCC-----CcEEEEEcCC-c---cHHHHHhhh-------cC-C---
Q 022615           88 EPDKPLIVHVGRLGVEKSLDF-LKRVM------DRLP-----EARIAFIGDG-P---YREELEKMF-------TG-M---  140 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~-l~~~~------~~~~-----~~~l~i~G~~-~---~~~~~~~~~-------~~-~---  140 (294)
                      .++....+++-|+..+|...+ ++..+      ...|     .+++++.|.. |   ..+.+.+++       +. .   
T Consensus       441 dp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~  520 (713)
T PF00343_consen  441 DPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVG  520 (713)
T ss_dssp             -TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTC
T ss_pred             CcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhc
Confidence            456677889999999998766 33322      2223     3678888852 1   112222222       11 1   


Q ss_pred             ---CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecC
Q 022615          141 ---PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  211 (294)
Q Consensus       141 ---~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~  211 (294)
                         +|.|+...+-.--..++..+|+.+..+.  .|+.|++-+-++..|.+.+++-.|..-|+.... ...++++|-
T Consensus       521 ~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v-G~eN~fiFG  595 (713)
T PF00343_consen  521 DRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV-GEENIFIFG  595 (713)
T ss_dssp             CGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH--GGGSEEES
T ss_pred             cceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc-CCCcEEEcC
Confidence               4777777666677789999999998765  799999999999999999999999888876221 134555553

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=96.58  E-value=0.02  Score=48.38  Aligned_cols=95  Identities=14%  Similarity=0.143  Sum_probs=64.2

Q ss_pred             CCceEEEeec-ccccccH--HHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCC--C-eEEEecccchhHHHHHhcCC
Q 022615           90 DKPLIVHVGR-LGVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM--P-AVFTGMLLGEELSQAYASGD  161 (294)
Q Consensus        90 ~~~~i~~~G~-~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~--~-v~~~g~~~~~~~~~~~~~ad  161 (294)
                      +..+++..|. .++.|.+  +.+.++++.+  .+.+++++|...+.+..++.....  + +.+.|..+-.++..+++.||
T Consensus       174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~  253 (334)
T TIGR02195       174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAK  253 (334)
T ss_pred             CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCC
Confidence            4456667766 3466653  3555555444  368899999876665555443322  2 34667777799999999999


Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ++|...     +..+-=|.|.|+|+|+-
T Consensus       254 l~I~~D-----SGp~HlAaA~~~P~i~l  276 (334)
T TIGR02195       254 AVVTND-----SGLMHVAAALNRPLVAL  276 (334)
T ss_pred             EEEeeC-----CHHHHHHHHcCCCEEEE
Confidence            999765     33444588999999974

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.57  E-value=0.018  Score=46.33  Aligned_cols=96  Identities=17%  Similarity=0.206  Sum_probs=60.0

Q ss_pred             CCCceEEEeecccccccH--HHHHHHHHhCC--CcEEEEEcCCcc--HHHHHhhhcCC---CeEEEecccchhHHHHHhc
Q 022615           89 PDKPLIVHVGRLGVEKSL--DFLKRVMDRLP--EARIAFIGDGPY--REELEKMFTGM---PAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~--~~l~~~~~~~~--~~~l~i~G~~~~--~~~~~~~~~~~---~v~~~g~~~~~~~~~~~~~  159 (294)
                      ++..+++..|.-.+.|.+  +.+.++++.+.  ...++++|...+  .+.........   .+.+.|..+-.++..+++.
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~  183 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISR  183 (247)
T ss_dssp             TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHT
T ss_pred             cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhc
Confidence            455677888877777764  34666666653  267888887766  33333343332   4777788777999999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ||++|.+-     +..+-=|.|.|+|+|+-
T Consensus       184 a~~~I~~D-----tg~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  184 ADLVIGND-----TGPMHLAAALGTPTVAL  208 (247)
T ss_dssp             SSEEEEES-----SHHHHHHHHTT--EEEE
T ss_pred             CCEEEecC-----ChHHHHHHHHhCCEEEE
Confidence            99999875     34455589999999985

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PLN02555 limonoid glucosyltransferase

Probab=96.54  E-value=0.12  Score=46.04  Aligned_cols=141  Identities=16%  Similarity=0.074  Sum_probs=77.0

Q ss_pred             CCceEEEeeccc--ccccHHHHHHHHHhCCCcEEEEE-cCC-----c----cHHHHHhhhcCCCeEEEecccchhHHHHH
Q 022615           90 DKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFI-GDG-----P----YREELEKMFTGMPAVFTGMLLGEELSQAY  157 (294)
Q Consensus        90 ~~~~i~~~G~~~--~~k~~~~l~~~~~~~~~~~l~i~-G~~-----~----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~  157 (294)
                      ...+.+.+|.+.  ..+.+..+..+++..+. .|+++ ...     .    ..+.+.+.. ..++.+.+++|+.+   ++
T Consensus       277 ~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~-~flW~~~~~~~~~~~~~~~lp~~~~~~~-~~~g~v~~W~PQ~~---iL  351 (480)
T PLN02555        277 SSVVYISFGTVVYLKQEQIDEIAYGVLNSGV-SFLWVMRPPHKDSGVEPHVLPEEFLEKA-GDKGKIVQWCPQEK---VL  351 (480)
T ss_pred             CceeEEEeccccCCCHHHHHHHHHHHHhcCC-eEEEEEecCcccccchhhcCChhhhhhc-CCceEEEecCCHHH---Hh
Confidence            345677778753  23345666667766543 55543 311     0    111122211 23567778987765   45


Q ss_pred             hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC----CcccccccCCCC-cceeecC-------CCCHHHHHHHHHHH
Q 022615          158 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDG-KIGYLFN-------PGDLDDCLSKLEPL  225 (294)
Q Consensus       158 ~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~~~~~~-~~g~~~~-------~~d~~~l~~~i~~l  225 (294)
                      +...+..+-+.  +.-++++||+.+|+|+|+.+..    ....++   .+. +.|+.+.       .-+.+++.++++++
T Consensus       352 ~H~~v~~FvtH--~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~---~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~v  426 (480)
T PLN02555        352 AHPSVACFVTH--CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYL---VDVFKTGVRLCRGEAENKLITREEVAECLLEA  426 (480)
T ss_pred             CCCccCeEEec--CCcchHHHHHHcCCCEEeCCCccccHHHHHHH---HHHhCceEEccCCccccCcCcHHHHHHHHHHH
Confidence            44333333332  3356899999999999987543    222222   122 4554441       12578999999999


Q ss_pred             hhChHHHHHHHHHHHH
Q 022615          226 LYNQELRETMGQAARQ  241 (294)
Q Consensus       226 l~~~~~~~~~~~~~~~  241 (294)
                      +.+++ -+++++++++
T Consensus       427 m~~~~-g~~~r~ra~~  441 (480)
T PLN02555        427 TVGEK-AAELKQNALK  441 (480)
T ss_pred             hcCch-HHHHHHHHHH
Confidence            97543 2344444443

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=96.50  E-value=0.089  Score=48.80  Aligned_cols=169  Identities=20%  Similarity=0.193  Sum_probs=112.3

Q ss_pred             ceEEeeccccCCCCCCCccch---HHHHHhhcCCCCCceEEEeecccccccHHHHHHHH----HhCC----CcEEEEEcC
Q 022615           58 KIRIWKKGVDSESFHPRFRSS---EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLP----EARIAFIGD  126 (294)
Q Consensus        58 ~i~~i~~gvd~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~----~~~~----~~~l~i~G~  126 (294)
                      .+..+|-|+|...+.......   ...........++.+++..-++...||...=+.++    .++|    ++.++.+..
T Consensus       240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~  319 (732)
T KOG1050|consen  240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIEN  319 (732)
T ss_pred             eeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEec
Confidence            455677888877665433222   22222223334677888888898888865444444    3444    344444432


Q ss_pred             -----CccHHHHHhhh----cCC----------C-eEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC---
Q 022615          127 -----GPYREELEKMF----TGM----------P-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG---  183 (294)
Q Consensus       127 -----~~~~~~~~~~~----~~~----------~-v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G---  183 (294)
                           +...+.++...    ...          . ..+...++..++.+++.-+|+.+..+..+|..+..+|+.+|.   
T Consensus       320 ~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~  399 (732)
T KOG1050|consen  320 PKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENK  399 (732)
T ss_pred             CCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhccc
Confidence                 22111222211    111          1 346677888999999999999999999999999999999885   


Q ss_pred             -CCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHH
Q 022615          184 -IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  231 (294)
Q Consensus       184 -~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~  231 (294)
                       .+.|.+...|..+..     +....++.+.+.++++..|..++...+.
T Consensus       400 ~~~lVlsef~G~~~tl-----~d~aivvnpw~~~~~~~~i~~al~~s~~  443 (732)
T KOG1050|consen  400 KSVLVLSEFIGDDTTL-----EDAAIVVNPWDGDEFAILISKALTMSDE  443 (732)
T ss_pred             CCceEEeeeccccccc-----cccCEEECCcchHHHHHHHHHHhhcCHH
Confidence             677877777777666     4556788888999999999999986553

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=96.42  E-value=0.086  Score=44.26  Aligned_cols=95  Identities=14%  Similarity=0.072  Sum_probs=61.9

Q ss_pred             CCceEEEeecccccccH--HHHHHHHHhC--CCcEEEEEcCCc-cHHHHHhhhcCC-CeEEEecccchhHHHHHhcCCEE
Q 022615           90 DKPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFIGDGP-YREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVF  163 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~-~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~  163 (294)
                      +..+++..|.-.+.|.+  +.+.++++.+  .+.+++++|.++ +.+..++..... +..+.|..+-.++..+++.||++
T Consensus       179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a~l~  258 (319)
T TIGR02193       179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGADAV  258 (319)
T ss_pred             CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcCCEE
Confidence            45567777765566654  4555555544  257888774443 334444433322 34567877779999999999999


Q ss_pred             EeecCCCCcchHHHHHHhcCCCEEee
Q 022615          164 VMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       164 l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      |...     +..+-=|.|.|+|+|+-
T Consensus       259 I~~D-----Sgp~HlAaa~g~P~i~l  279 (319)
T TIGR02193       259 VGVD-----TGLTHLAAALDKPTVTL  279 (319)
T ss_pred             EeCC-----ChHHHHHHHcCCCEEEE
Confidence            9765     33444578999999974

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=96.37  E-value=0.019  Score=53.35  Aligned_cols=123  Identities=20%  Similarity=0.234  Sum_probs=84.7

Q ss_pred             CCCCceEEEeecccccccHHH-HHHHHHh------CCC-----cEEEEEcCC-c---cHHHHHhhhc-------C-----
Q 022615           88 EPDKPLIVHVGRLGVEKSLDF-LKRVMDR------LPE-----ARIAFIGDG-P---YREELEKMFT-------G-----  139 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~------~~~-----~~l~i~G~~-~---~~~~~~~~~~-------~-----  139 (294)
                      .++.+..+++-|+..+|...+ ++..+..      .|+     .++++.|.. |   ..+.+.+++.       .     
T Consensus       527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  606 (797)
T cd04300         527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVG  606 (797)
T ss_pred             CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcC
Confidence            567778899999999998776 5544322      232     667777742 1   1122222211       1     


Q ss_pred             --CCeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecC
Q 022615          140 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  211 (294)
Q Consensus       140 --~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~  211 (294)
                        .+|.|+....-.--..++..||+....|.  .|+.|++-+-+|..|.+.+++-.|...|+.... .+.++++|-
T Consensus       607 ~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v-G~eN~fiFG  681 (797)
T cd04300         607 DKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEV-GEENIFIFG  681 (797)
T ss_pred             CceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHh-CcCcEEEeC
Confidence              13777776655667789999999998765  689999999999999999999988888887221 156777663

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=96.27  E-value=0.012  Score=54.41  Aligned_cols=121  Identities=17%  Similarity=0.209  Sum_probs=83.6

Q ss_pred             CCCCceEEEeecccccccHHH-HHHHHH------hCCC-----cEEEEEcCC-c---cHHHHHhhhc-------C-----
Q 022615           88 EPDKPLIVHVGRLGVEKSLDF-LKRVMD------RLPE-----ARIAFIGDG-P---YREELEKMFT-------G-----  139 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~------~~~~-----~~l~i~G~~-~---~~~~~~~~~~-------~-----  139 (294)
                      .++.+.++++-|+..+|...+ ++..+.      ..|+     .++++.|.. |   ..+.+.+++.       +     
T Consensus       526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  605 (798)
T PRK14985        526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG  605 (798)
T ss_pred             CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence            456667788889999998766 544332      2232     677777742 1   1122222221       1     


Q ss_pred             --CCeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCC--CcceeecC
Q 022615          140 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFN  211 (294)
Q Consensus       140 --~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~--~~~g~~~~  211 (294)
                        .+|.|+....-.--..++..||+....|.  .|+.|++-+-+|..|.+.+++-.|...|+.   +.  +.+|++|-
T Consensus       606 ~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~---e~vG~eN~f~fG  680 (798)
T PRK14985        606 DKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIA---EQVGEENIFIFG  680 (798)
T ss_pred             CceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHH---HHhCcCcEEEeC
Confidence              14777777666677789999999998765  789999999999999999999888888877   32  56777763

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=96.16  E-value=0.0079  Score=45.74  Aligned_cols=47  Identities=19%  Similarity=0.092  Sum_probs=40.4

Q ss_pred             ccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecccc
Q 022615           19 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD   67 (294)
Q Consensus        19 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd   67 (294)
                      .++.++.-|+.+.+.+|.+|+-|+.+.+++.+.++  ..+..+||+|.|
T Consensus       139 ~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  139 AKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             HHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC--CCCcEEecCCCC
Confidence            44556677999999999999999999999999986  347899999976

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=96.15  E-value=0.16  Score=42.71  Aligned_cols=94  Identities=13%  Similarity=0.104  Sum_probs=60.6

Q ss_pred             CceEEEeecccccccH--HHHHHHHHhC--CCcEEEEE-cCCccHHHHHhhhcCC-CeEEEecccchhHHHHHhcCCEEE
Q 022615           91 KPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~-G~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      +.+++..|.-...|.+  +.+.++++.+  .+.++++. |...+.+..++..... ++.+.|..+-.++..+++.||++|
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I  258 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVV  258 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEE
Confidence            3444455544444543  3555555544  35777776 6444444444444332 366778887899999999999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEee
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ...     +..+-=|.|+|+|+|+-
T Consensus       259 ~nD-----SGp~HlA~A~g~p~val  278 (322)
T PRK10964        259 SVD-----TGLSHLTAALDRPNITL  278 (322)
T ss_pred             ecC-----CcHHHHHHHhCCCEEEE
Confidence            765     34455589999999985

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=96.04  E-value=0.52  Score=38.01  Aligned_cols=194  Identities=14%  Similarity=0.117  Sum_probs=95.1

Q ss_pred             HHHHhCCeEEecchhhH--HHHH-HhccC---CcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceE---EEeec
Q 022615           29 FLHRAADLTLVPSVAIG--KDLE-AARVT---AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI---VHVGR   99 (294)
Q Consensus        29 ~~~~~ad~ii~~s~~~~--~~~~-~~~~~---~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~G~   99 (294)
                      -+++.+|.|++.|...-  +.+. ..++.   .-+++..+|.....+   +...-...+...- ...+.+..   +|+|+
T Consensus       116 ~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~nfq---pp~~i~~~Rstyw-kd~se~nmnv~~yigR  191 (355)
T PF11440_consen  116 GTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLFDRIKKFPMVFNFQ---PPMDINKYRSTYW-KDVSEKNMNVNRYIGR  191 (355)
T ss_dssp             HHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SSS-------EEE-------B-HHHHHHHH----GGGSEEEEEEEE--
T ss_pred             HHHHhhcEEEeccccchHHHHHHHhhccccCchhhhhhhcceeeecC---CcccHHHHHHHHh-hhhHhhhcccceeeee
Confidence            45689999999875432  2222 33321   124555555554432   2222222232221 22233444   79999


Q ss_pred             ccccccHHHHHHHHHhC---CCcEEEEEcCCccHHHH--Hhh------h---------cCC--CeEEEecccchhHHHHH
Q 022615          100 LGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREEL--EKM------F---------TGM--PAVFTGMLLGEELSQAY  157 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~---~~~~l~i~G~~~~~~~~--~~~------~---------~~~--~v~~~g~~~~~~~~~~~  157 (294)
                      ....||+..+++.-...   ++++-++-|-......+  .+.      .         -..  .+.++|..-++|+.+.|
T Consensus       192 ~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~M  271 (355)
T PF11440_consen  192 QTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERM  271 (355)
T ss_dssp             SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHH
T ss_pred             eeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHH
Confidence            99999999999877655   46777787832211111  111      0         011  27788888889999999


Q ss_pred             hcCCEEEeecC------CCCcchHHHHHHhcCC-CEEeecCCCc-------ccccccCCCCcceeecCCCCHHHHHHHHH
Q 022615          158 ASGDVFVMPSE------SETLGLVVLEAMSSGI-PVVGVRAGGI-------PDIIPEDQDGKIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       158 ~~ad~~l~ps~------~e~~~~~~~Ea~a~G~-pvI~~~~~~~-------~e~~~~~~~~~~g~~~~~~d~~~l~~~i~  223 (294)
                      +.+-+...-+.      .+.+-.+-+|..|||. ||.-...|..       ..++   ......+.++..|.++-.++|.
T Consensus       272 aks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~---~~~~~~I~~De~dle~T~ekl~  348 (355)
T PF11440_consen  272 AKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYI---DHPYSAIYFDENDLESTVEKLI  348 (355)
T ss_dssp             HTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGG---SS--S-EEE-TTSHHHHHHHHH
T ss_pred             hhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceee---ccCcceeEeccchHHHHHHHHH
Confidence            99988876543      2356778899999995 4544333322       2233   3345566788889999888888


Q ss_pred             HHhhCh
Q 022615          224 PLLYNQ  229 (294)
Q Consensus       224 ~ll~~~  229 (294)
                      ++.+++
T Consensus       349 E~a~~~  354 (355)
T PF11440_consen  349 EVANNR  354 (355)
T ss_dssp             HHHT-H
T ss_pred             HHhccC
Confidence            876553

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=95.98  E-value=0.022  Score=52.73  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=84.0

Q ss_pred             CCCCceEEEeecccccccHHH-HHHHHHhC------C-----CcEEEEEcCC-c---cHHHHHhhhc-------C-----
Q 022615           88 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDG-P---YREELEKMFT-------G-----  139 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~------~-----~~~l~i~G~~-~---~~~~~~~~~~-------~-----  139 (294)
                      .++.+..+++-|+..+|...+ ++..+..+      |     ..++++.|.. |   ..+.+.+++.       +     
T Consensus       524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~  603 (794)
T TIGR02093       524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVG  603 (794)
T ss_pred             CccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhC
Confidence            456667788889999998776 55543322      3     3477777742 1   1122222221       1     


Q ss_pred             --CCeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecC
Q 022615          140 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  211 (294)
Q Consensus       140 --~~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~  211 (294)
                        .+|.|+....-.--..++..||+....|.  .|+.|++-+-+|..|.+.|++-.|...|+.... .+.++++|-
T Consensus       604 ~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~v-G~eN~fiFG  678 (794)
T TIGR02093       604 DKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEV-GAENIFIFG  678 (794)
T ss_pred             CceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHh-CcccEEEcC
Confidence              14777777655677789999999998765  689999999999999999999888888887221 155777663

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=95.93  E-value=0.13  Score=46.10  Aligned_cols=144  Identities=15%  Similarity=0.134  Sum_probs=82.7

Q ss_pred             CceEEEeeccc-----ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhc---CCCeEEEecccchhHHHHHhcCCE
Q 022615           91 KPLIVHVGRLG-----VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDV  162 (294)
Q Consensus        91 ~~~i~~~G~~~-----~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~  162 (294)
                      ..+++.+|...     +.+....+..+++..+++.|+..=.+.....+.+...   ..+|...+++|+.++.  +....+
T Consensus       278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll--l~H~~v  355 (496)
T KOG1192|consen  278 SVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL--LDHPAV  355 (496)
T ss_pred             CeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh--cCCCcC
Confidence            56666677764     3445677888888887887666544332222222222   3468888999998877  333333


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEeecC----CCcccccccCCCCcceeecCC-CCHHHHHHHHHHHhhChHHHHHHHH
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETMGQ  237 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~----~~~~e~~~~~~~~~~g~~~~~-~d~~~l~~~i~~ll~~~~~~~~~~~  237 (294)
                      ..+-+ ..|++ +++|++.+|+|+|+.+.    ......+.  +.+..++.... -+...+.+++..++.+++..+...+
T Consensus       356 ~~FvT-HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~--~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~~~  431 (496)
T KOG1192|consen  356 GGFVT-HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLV--RHGGGGVLDKRDLVSEELLEAIKEILENEEYKEAAKR  431 (496)
T ss_pred             cEEEE-CCccc-HHHHHHhcCCceecCCccccchhHHHHHH--hCCCEEEEehhhcCcHHHHHHHHHHHcChHHHHHHHH
Confidence            33333 23343 45999999999996432    23333331  33444443322 1223378888888877765444443


Q ss_pred             HHH
Q 022615          238 AAR  240 (294)
Q Consensus       238 ~~~  240 (294)
                      -+.
T Consensus       432 l~~  434 (496)
T KOG1192|consen  432 LSE  434 (496)
T ss_pred             HHH
Confidence            333

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=95.72  E-value=0.28  Score=41.83  Aligned_cols=97  Identities=11%  Similarity=0.100  Sum_probs=63.2

Q ss_pred             CCCceEEEeecccccccH--HHHHHHHHhC--CCcEEEEEcCCcc--HHHHHhhhc---CC-CeEEEecccchhHHHHHh
Q 022615           89 PDKPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFIGDGPY--REELEKMFT---GM-PAVFTGMLLGEELSQAYA  158 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~--~~~~~~~~~---~~-~v~~~g~~~~~~~~~~~~  158 (294)
                      ++..+++..|.-.+.|.+  +.+.++++.+  .+.+++++|...+  .+..++...   .. .+.+.|..+-.++..+++
T Consensus       182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~  261 (352)
T PRK10422        182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID  261 (352)
T ss_pred             CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence            345677788876566653  3455555444  3678888875432  222233332   22 255778887899999999


Q ss_pred             cCCEEEeecCCCCcchHHHHHHhcCCCEEeec
Q 022615          159 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  190 (294)
Q Consensus       159 ~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~  190 (294)
                      .||++|...     +..+-=|.|.|+|+|+--
T Consensus       262 ~a~l~v~nD-----SGp~HlAaA~g~P~v~lf  288 (352)
T PRK10422        262 HAQLFIGVD-----SAPAHIAAAVNTPLICLF  288 (352)
T ss_pred             hCCEEEecC-----CHHHHHHHHcCCCEEEEE
Confidence            999999765     334555889999999753

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=95.68  E-value=0.1  Score=46.69  Aligned_cols=176  Identities=13%  Similarity=0.191  Sum_probs=110.0

Q ss_pred             CCCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEE-----cCCccHHHHHhhhcCC-CeEEEecccchhHHHHHhc
Q 022615           88 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-----GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~-----G~~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~~~  159 (294)
                      +++.++++.+..+-.  .+-+....+.+++.|+-.|.+.     |....+...+++.-+. +|.|..-...+|-..-.+-
T Consensus       756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~L  835 (966)
T KOG4626|consen  756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQL  835 (966)
T ss_pred             CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhh
Confidence            344444555554421  2345666778888898665554     4433334444443333 5888888888888888999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC---CCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~---~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      +|+.+-.....|- ++-+|.+.+|+|+|+-.......-+...   .-|-.-++..  +.++..+.-.++-.|.+..+.++
T Consensus       836 aDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Latd~~~L~~lr  912 (966)
T KOG4626|consen  836 ADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLATDKEYLKKLR  912 (966)
T ss_pred             hhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhcCHHHHHHHH
Confidence            9999875543332 3456999999999986443222111000   1121222333  77888888888888888888887


Q ss_pred             HHHHHHH-H--hCCHHHHHHHHHHHHHHHHHHHH
Q 022615          237 QAARQEM-E--KYDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       237 ~~~~~~~-~--~~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                      ..-+..- .  -|+-...+..+. .+|.++-++.
T Consensus       913 ~~l~~~r~~splfd~~q~~~~LE-~~y~~MW~~y  945 (966)
T KOG4626|consen  913 AKLRKARASSPLFDTKQYAKGLE-RLYLQMWKKY  945 (966)
T ss_pred             HHHHHHhcCCCccCchHHHHHHH-HHHHHHHHHh
Confidence            7766653 2  388889998887 7888775443

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=95.61  E-value=0.11  Score=44.27  Aligned_cols=96  Identities=14%  Similarity=0.111  Sum_probs=63.6

Q ss_pred             CCCceEEEeecc-cccccH--HHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCC------C-eEEEecccchhHHHH
Q 022615           89 PDKPLIVHVGRL-GVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQA  156 (294)
Q Consensus        89 ~~~~~i~~~G~~-~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~------~-v~~~g~~~~~~~~~~  156 (294)
                      ++..+++..|.- ++.|.+  +.+.++++.+  .+.+++++|...+.+..++.....      + +.+.|..+-.++..+
T Consensus       179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al  258 (348)
T PRK10916        179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL  258 (348)
T ss_pred             CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence            344566677763 355653  3455555444  367889999766655554443221      1 456677777999999


Q ss_pred             HhcCCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          157 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       157 ~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ++.||++|...     +..+-=|.|.|+|+|+-
T Consensus       259 i~~a~l~I~nD-----TGp~HlAaA~g~P~val  286 (348)
T PRK10916        259 IAACKAIVTND-----SGLMHVAAALNRPLVAL  286 (348)
T ss_pred             HHhCCEEEecC-----ChHHHHHHHhCCCEEEE
Confidence            99999999764     33444589999999974

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=95.61  E-value=0.097  Score=44.32  Aligned_cols=95  Identities=19%  Similarity=0.309  Sum_probs=66.5

Q ss_pred             CceEEEee-cccccccH--HHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCCC--eEEEecccchhHHHHHhcCCEE
Q 022615           91 KPLIVHVG-RLGVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVF  163 (294)
Q Consensus        91 ~~~i~~~G-~~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~~--v~~~g~~~~~~~~~~~~~ad~~  163 (294)
                      ..+++..| ..+..|.+  +.+.++++.+  ...+++++|...+.+..+++.+..+  +.+.|..+-.++..++..||++
T Consensus       176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l~  255 (334)
T COG0859         176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADLV  255 (334)
T ss_pred             CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCEE
Confidence            45677777 55566653  3455555444  2378999998766666666665543  2278888889999999999999


Q ss_pred             EeecCCCCcchHHHHHHhcCCCEEeec
Q 022615          164 VMPSESETLGLVVLEAMSSGIPVVGVR  190 (294)
Q Consensus       164 l~ps~~e~~~~~~~Ea~a~G~pvI~~~  190 (294)
                      |.+.     +..+-=|.|.|+|+|+--
T Consensus       256 I~~D-----Sg~~HlAaA~~~P~I~iy  277 (334)
T COG0859         256 IGND-----SGPMHLAAALGTPTIALY  277 (334)
T ss_pred             EccC-----ChHHHHHHHcCCCEEEEE
Confidence            9775     334445889999999853

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=95.58  E-value=0.39  Score=40.09  Aligned_cols=73  Identities=16%  Similarity=0.113  Sum_probs=48.6

Q ss_pred             CcEEEEEcCCccHH----HHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC
Q 022615          118 EARIAFIGDGPYRE----ELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  192 (294)
Q Consensus       118 ~~~l~i~G~~~~~~----~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~  192 (294)
                      +..+.|........    .+.+.... ..+.+...-+..-+..+|..||.++...-.   -..+.||++.|+||.+-..+
T Consensus       182 ~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~  258 (311)
T PF06258_consen  182 GGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDS---VSMVSEAAATGKPVYVLPLP  258 (311)
T ss_pred             CCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCcc---HHHHHHHHHcCCCEEEecCC
Confidence            36787777543333    33334422 245455555556688999999999987542   23478999999999887665


Q ss_pred             C
Q 022615          193 G  193 (294)
Q Consensus       193 ~  193 (294)
                      +
T Consensus       259 ~  259 (311)
T PF06258_consen  259 G  259 (311)
T ss_pred             C
Confidence            5

The function of this family is unknown.

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=95.37  E-value=0.02  Score=47.56  Aligned_cols=70  Identities=17%  Similarity=0.231  Sum_probs=49.1

Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC-CCEEeecC--CCcccccccCCCCcceeecCCCCHHHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA--GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G-~pvI~~~~--~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~  223 (294)
                      .+..+.|+.|.+++.|.....+..-++|||++| +|||.++.  -.+.+.+   .=....+.++..+..++.+.|+
T Consensus       228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l---dw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL---DWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc---CHHHEEEEECHHHHHHHHHHHh
Confidence            568899999999999887766888999999999 57777653  2445555   2234555666555555555443

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=95.11  E-value=1.6  Score=36.21  Aligned_cols=151  Identities=20%  Similarity=0.131  Sum_probs=84.3

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      ...+++.+.+++++|.+.+=.+...+.+++.+ .   ++.+.|   |+....+......     . ...++..+++.-+-
T Consensus       115 ~~~r~~~~~~l~~~~~i~vRD~~S~~~l~~~g-~---~i~~~~---D~a~~l~~~~~~~-----~-~~~~~~~i~i~~r~  181 (298)
T TIGR03609       115 RLSRWLVRRVLRGCRAISVRDAASYRLLKRLG-I---PAELAA---DPVWLLPPEPWPG-----G-EPLPEPVIVVSLRP  181 (298)
T ss_pred             HHHHHHHHHHHccCCEEEEeCHHHHHHHHHhC-C---CceEeC---ChhhhCCCCcccc-----c-ccCCCCeEEEEECC
Confidence            34567888999999999998888888887643 3   455554   3333222111000     0 11123344433322


Q ss_pred             -c--ccccHHHHHHHHHhC---CCcEEEEEcC--CccHHHHHhhhcCC--CeEEEecccchhHHHHHhcCCEEEeecCCC
Q 022615          101 -G--VEKSLDFLKRVMDRL---PEARIAFIGD--GPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESE  170 (294)
Q Consensus       101 -~--~~k~~~~l~~~~~~~---~~~~l~i~G~--~~~~~~~~~~~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e  170 (294)
                       .  .....+.+.++++.+   .+.+++++..  ..+.+..+++....  +..+....+.+++.+++++||++|....  
T Consensus       182 ~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl--  259 (298)
T TIGR03609       182 WPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL--  259 (298)
T ss_pred             CCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech--
Confidence             1  122344555555544   2556655542  23333333333221  1222344556899999999999885542  


Q ss_pred             CcchHHHHHHhcCCCEEee
Q 022615          171 TLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~  189 (294)
                         ..++=|+.+|+|+|+-
T Consensus       260 ---H~~I~A~~~gvP~i~i  275 (298)
T TIGR03609       260 ---HALILAAAAGVPFVAL  275 (298)
T ss_pred             ---HHHHHHHHcCCCEEEe
Confidence               3466799999999865

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=95.01  E-value=0.25  Score=42.05  Aligned_cols=95  Identities=13%  Similarity=0.151  Sum_probs=61.5

Q ss_pred             CCceEEEeecccccccH--HHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhh---cCCC-eEEEecccchhHHHHHhc
Q 022615           90 DKPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFIGDGP--YREELEKMF---TGMP-AVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~---~~~~-v~~~g~~~~~~~~~~~~~  159 (294)
                      +..+++..|.-.+.|.+  +.+.++++.+  .+..++++|...  +.+..++..   ...+ +.+.|..+-.++..+++.
T Consensus       181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~  260 (344)
T TIGR02201       181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDH  260 (344)
T ss_pred             CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHh
Confidence            44566777765565553  3444444433  367888988643  222233322   2222 446787777999999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ||++|...     +..+-=|.|.|+|+|+-
T Consensus       261 a~l~Vs~D-----SGp~HlAaA~g~p~v~L  285 (344)
T TIGR02201       261 ARLFIGVD-----SVPMHMAAALGTPLVAL  285 (344)
T ss_pred             CCEEEecC-----CHHHHHHHHcCCCEEEE
Confidence            99999764     34455589999999975

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=94.90  E-value=0.82  Score=38.30  Aligned_cols=192  Identities=15%  Similarity=0.072  Sum_probs=108.4

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCc-CceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc-c
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAA-NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG-V  102 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~-~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~-~  102 (294)
                      -.++.+-+..|.|++.....-..+...++.+. -+-.+.+.|+=....+......      ....++..+++.+|.-. .
T Consensus       159 ~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~------~~~pE~~~Ilvs~GGG~dG  232 (400)
T COG4671         159 ETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPP------HEAPEGFDILVSVGGGADG  232 (400)
T ss_pred             HHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCC------cCCCccceEEEecCCChhh
Confidence            46778888899999988776666666665432 1224455554311110000000      00134566777777542 2


Q ss_pred             cccHHHHHHHHHhCCCcE---EEEEcCCccHHHHHhh---hc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          103 EKSLDFLKRVMDRLPEAR---IAFIGDGPYREELEKM---FT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       103 ~k~~~~l~~~~~~~~~~~---l~i~G~~~~~~~~~~~---~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      ..-++..++|...+++.+   +++.|..--....+++   +. ..++.+..+.  +++..++..|+..|.-..    =++
T Consensus       233 ~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~--~~~~~ll~gA~~vVSm~G----YNT  306 (400)
T COG4671         233 AELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFR--NDFESLLAGARLVVSMGG----YNT  306 (400)
T ss_pred             HHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhh--hhHHHHHHhhheeeeccc----chh
Confidence            223445555656656554   5666754323333333   22 3479999998  999999999999986542    256


Q ss_pred             HHHHHhcCCCEEeecCCCc--ccccccC---CCCcceeec-CCCCHHHHHHHHHHHhhC
Q 022615          176 VLEAMSSGIPVVGVRAGGI--PDIIPED---QDGKIGYLF-NPGDLDDCLSKLEPLLYN  228 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~--~e~~~~~---~~~~~g~~~-~~~d~~~l~~~i~~ll~~  228 (294)
                      +.|-+++|||.+.-+...-  ...+...   +=|-..++. +.-+++.++++|..+++-
T Consensus       307 vCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~  365 (400)
T COG4671         307 VCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR  365 (400)
T ss_pred             hhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence            7899999999766543221  1222110   112222222 223578888888888763

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=94.44  E-value=2.2  Score=34.50  Aligned_cols=158  Identities=13%  Similarity=0.125  Sum_probs=82.0

Q ss_pred             ccccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEee
Q 022615           19 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG   98 (294)
Q Consensus        19 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G   98 (294)
                      .....+.+.+.++++++.+.+=.+...+.+.+ .+.+. ++.++|..+   ...+........     .......+.+..
T Consensus       113 ~~~~~~~~~~~~l~~~~~i~vRD~~S~~~l~~-~g~~~-~~~~~~D~a---f~l~~~~~~~~~-----~~~~~~~~~~~~  182 (286)
T PF04230_consen  113 RSEEFKKLLRRILSKADYISVRDEYSYELLKK-LGISG-NVKLVPDPA---FLLPPSYPDEDK-----SKPKRNYISVSN  182 (286)
T ss_pred             CCHHHHHHHHHHHhCCCEEEECCHHHHHHHHH-cCCCC-CcEEEeCch---hhcCcccccccc-----cccccceeeecc
Confidence            34455678899999999988888887775555 44443 777777544   221111111000     000111122222


Q ss_pred             cc--cccccHHHHHHHHHhC--CC--cEEEEEcCCc--cH-HHHHh----hhcCCC-eEEEecccchhHHHHHhcCCEEE
Q 022615           99 RL--GVEKSLDFLKRVMDRL--PE--ARIAFIGDGP--YR-EELEK----MFTGMP-AVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        99 ~~--~~~k~~~~l~~~~~~~--~~--~~l~i~G~~~--~~-~~~~~----~~~~~~-v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      ..  ......+.+.+.+..+  ..  +.+.......  .. .....    .....+ .......+.+++.++++.++++|
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I  262 (286)
T PF04230_consen  183 SPSRNNEEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVI  262 (286)
T ss_pred             ccchhhhhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEE
Confidence            11  1222234444444443  22  2333232211  11 11111    111112 33444556689999999999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecC
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRA  191 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~  191 (294)
                      ....     ...+=|+++|+|+|+-..
T Consensus       263 s~Rl-----H~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  263 SMRL-----HGAILALSLGVPVIAISY  284 (286)
T ss_pred             ecCC-----HHHHHHHHcCCCEEEEec
Confidence            7653     345669999999997543

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.91  E-value=0.077  Score=37.73  Aligned_cols=46  Identities=17%  Similarity=0.200  Sum_probs=32.4

Q ss_pred             chhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcc
Q 022615          150 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  195 (294)
Q Consensus       150 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~  195 (294)
                      .+++.+++..+|++|-.|..+..-..+-.++.+|+|+|+...|...
T Consensus        58 ~~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~  103 (124)
T PF01113_consen   58 TDDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSD  103 (124)
T ss_dssp             BS-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHH
T ss_pred             chhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCH
Confidence            3778999999999998887666666677788999999987666543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=93.83  E-value=0.21  Score=33.77  Aligned_cols=77  Identities=14%  Similarity=0.245  Sum_probs=48.6

Q ss_pred             EEEEcC-CccHHHHHhhhcCCCeE--EE---ecccchh--HHHHHhcCCEEEeecCCC---CcchHHHHHHhcCCCEEee
Q 022615          121 IAFIGD-GPYREELEKMFTGMPAV--FT---GMLLGEE--LSQAYASGDVFVMPSESE---TLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       121 l~i~G~-~~~~~~~~~~~~~~~v~--~~---g~~~~~~--~~~~~~~ad~~l~ps~~e---~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ++|+|. ......+.+..++.+..  ++   +......  +...++.||++|++...-   ..-..--+|-..|+|++.+
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~   81 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYS   81 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEE
Confidence            456665 44556666666666533  33   2233334  899999999999987532   2233345667789999988


Q ss_pred             cCCCcccc
Q 022615          190 RAGGIPDI  197 (294)
Q Consensus       190 ~~~~~~e~  197 (294)
                      +..+...+
T Consensus        82 ~~~~~~~l   89 (97)
T PF10087_consen   82 RSRGVSSL   89 (97)
T ss_pred             CCCCHHHH
Confidence            76554433

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=92.92  E-value=4.2  Score=32.81  Aligned_cols=38  Identities=24%  Similarity=0.279  Sum_probs=26.4

Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecC
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  191 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~  191 (294)
                      .-..++++.||.++.....-   +...||.+.|+||-+-..
T Consensus       236 NPY~~~La~Adyii~TaDSi---nM~sEAasTgkPv~~~~~  273 (329)
T COG3660         236 NPYIDMLAAADYIISTADSI---NMCSEAASTGKPVFILEP  273 (329)
T ss_pred             CchHHHHhhcceEEEecchh---hhhHHHhccCCCeEEEec
Confidence            34678888888888764322   235699999999876533

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=91.31  E-value=2.7  Score=30.64  Aligned_cols=90  Identities=20%  Similarity=0.329  Sum_probs=55.1

Q ss_pred             ceEEEeecccccccHHHHHHHH---------HhCCCcEEEE-EcCC-cc-HHHHHhhhcCCCeEEEecccchhHHHHHhc
Q 022615           92 PLIVHVGRLGVEKSLDFLKRVM---------DRLPEARIAF-IGDG-PY-REELEKMFTGMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~~~---------~~~~~~~l~i-~G~~-~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      .+++.+|.-.    ++.|+.++         .+..=.+++| +|.| .. .+......+...+.+.++--...+.+.++.
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~   80 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRS   80 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhh
Confidence            3566677553    44444433         2322245544 4665 21 122222223445677777666899999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ||+++.=    +...+++|.+..|+|.|+-
T Consensus        81 AdlVIsH----AGaGS~letL~l~KPlivV  106 (170)
T KOG3349|consen   81 ADLVISH----AGAGSCLETLRLGKPLIVV  106 (170)
T ss_pred             ccEEEec----CCcchHHHHHHcCCCEEEE
Confidence            9999842    3456799999999998764

>TIGR03646 YtoQ_fam YtoQ family protein

Probab=90.85  E-value=2  Score=30.39  Aligned_cols=71  Identities=11%  Similarity=0.068  Sum_probs=39.9

Q ss_pred             HHHHHhcCCEEEeecC--CCCcchH--HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHh
Q 022615          153 LSQAYASGDVFVMPSE--SETLGLV--VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  226 (294)
Q Consensus       153 ~~~~~~~ad~~l~ps~--~e~~~~~--~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll  226 (294)
                      -..++..||++|.-..  +--+...  .--|.|.|+|.|+-..+....-+   +.-......-..++++..+.|..++
T Consensus        69 T~~li~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpL---KEvdaaA~avaetp~Qvv~iL~Yv~  143 (144)
T TIGR03646        69 TRKLIEKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIILRPEELIHPL---KEVDNKAQAVVETPEQAIETLKYIL  143 (144)
T ss_pred             HHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccH---HHHhHHHHHHhcCHHHHHHHHHHhh
Confidence            4478999999886431  1111111  23467899999987655444444   2222222333346777777666543

Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.62  E-value=1.8  Score=36.94  Aligned_cols=101  Identities=11%  Similarity=0.012  Sum_probs=62.3

Q ss_pred             HHHHhhhcCCCeEEEecc------cchhHHHHHhcCCEEEeecC--CC-CcchHHHHHHhcCCCEEeec--CCCcccccc
Q 022615          131 EELEKMFTGMPAVFTGML------LGEELSQAYASGDVFVMPSE--SE-TLGLVVLEAMSSGIPVVGVR--AGGIPDIIP  199 (294)
Q Consensus       131 ~~~~~~~~~~~v~~~g~~------~~~~~~~~~~~ad~~l~ps~--~e-~~~~~~~Ea~a~G~pvI~~~--~~~~~e~~~  199 (294)
                      +.++++.+...|...|..      +.++..++++...+.+..-.  .+ -..-++.+|+.+|+..|.-.  .+...++++
T Consensus       193 ~~~~~L~~~~~vd~yG~c~~~~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P  272 (349)
T PF00852_consen  193 EYVRELSKYIPVDSYGKCGNNNPCPRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAP  272 (349)
T ss_dssp             HHHHHHHTTS-EEE-SSTT--SSS--S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-
T ss_pred             HHHHHHHhhcCeEccCCCCCCCCcccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCC
Confidence            445555555678888876      23467899999999987643  22 34668999999997666554  556666662


Q ss_pred             cCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHH
Q 022615          200 EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       200 ~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                         .+.--.+-+..+++++++.|..+..|++.+.+
T Consensus       273 ---~~SfI~~~df~s~~~La~yl~~l~~n~~~Y~~  304 (349)
T PF00852_consen  273 ---PNSFIHVDDFKSPKELADYLKYLDKNDELYNK  304 (349)
T ss_dssp             ---GGGSEEGGGSSSHHHHHHHHHHHHT-HHHHH-
T ss_pred             ---CCCccchhcCCCHHHHHHHHHHHhcCHHHHhh
Confidence               22222222445899999999999999887764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.

>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis

Probab=90.52  E-value=1.6  Score=30.75  Aligned_cols=71  Identities=13%  Similarity=0.110  Sum_probs=41.7

Q ss_pred             HHHHHhcCCEEEeecC--CCCcchH--HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHh
Q 022615          153 LSQAYASGDVFVMPSE--SETLGLV--VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  226 (294)
Q Consensus       153 ~~~~~~~ad~~l~ps~--~e~~~~~--~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll  226 (294)
                      -..++..||++|.-..  +--+...  .--|.|.|+|.|+-.......-+   +.-......-..++++..+.|..++
T Consensus        66 T~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpL---KEvda~A~a~~et~~Qvv~iL~Yv~  140 (141)
T PF11071_consen   66 TRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPL---KEVDAAALAVAETPEQVVEILRYVL  140 (141)
T ss_pred             HHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccH---HHHhHhhHhhhCCHHHHHHHHHHHh
Confidence            4478999999886431  1111111  23467899999987665554444   2222233333447888877777654

This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=89.58  E-value=1.9  Score=38.41  Aligned_cols=85  Identities=13%  Similarity=0.182  Sum_probs=55.2

Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC-CCEEeecCC--CcccccccCCCCcceeecCCCCHHHHHHHHHHHhh
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG--GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  227 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G-~pvI~~~~~--~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~  227 (294)
                      ..+.+.++.|.+++.|...+.....++||+..| +|||.++.-  ...+.+   .-..-.+.++.   +++.+.|.+.|.
T Consensus       335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~---d~~~fSV~v~~---~~v~~~~~~iL~  408 (464)
T KOG1021|consen  335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVL---DWTEFSVFVPE---KDVPELIKNILL  408 (464)
T ss_pred             chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCc---cceEEEEEEEH---HHhhhHHHHHHH
Confidence            678899999999999999888888999999999 678888763  333333   22244444443   333333344443


Q ss_pred             --ChHHHHHHHHHHHH
Q 022615          228 --NQELRETMGQAARQ  241 (294)
Q Consensus       228 --~~~~~~~~~~~~~~  241 (294)
                        ..+.+..|.++...
T Consensus       409 ~i~~~~~~~m~~~v~~  424 (464)
T KOG1021|consen  409 SIPEEEVLRMRENVIR  424 (464)
T ss_pred             hcCHHHHHHHHHHHHH
Confidence              23345555555554

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=89.25  E-value=14  Score=32.19  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=41.3

Q ss_pred             cccchhHHHHHhcCCEEEeecCC--CCcchHHH-HHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSES--ETLGLVVL-EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS  220 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~-Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~  220 (294)
                      .++.+++..++..+|+++..+..  .-.+...+ +++.-....+.-|.+..+++-+....-.+.++++-+|.+.+.+
T Consensus       226 ~~~l~el~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~~iDDL~~iv~  302 (414)
T COG0373         226 AVALEELLEALAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLYTIDDLEEIVE  302 (414)
T ss_pred             eecHHHHHHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCccccCcCCeEEEehhhHHHHHH
Confidence            44558999999999999987542  22343333 4444444456667765555541111112345665555544433

>PF12996 DUF3880: DUF based on E

Probab=89.12  E-value=0.78  Score=29.60  Aligned_cols=65  Identities=14%  Similarity=0.082  Sum_probs=47.9

Q ss_pred             HHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           28 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        28 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      ..+....|.|++......+.+++.+ .  .+|+.+|.++++..+.+.......      ...-.--|.|+|+.-
T Consensus        13 ~~i~~~~~~iFt~D~~~~~~~~~~G-~--~~V~yLPLAa~~~~~~p~~~~~~~------~~~~~~dIsFVG~~y   77 (79)
T PF12996_consen   13 YSIANSYDYIFTFDRSFVEEYRNLG-A--ENVFYLPLAANPERFRPIPVDPEE------RKKYECDISFVGSLY   77 (79)
T ss_pred             hhhCCCCCEEEEECHHHHHHHHHcC-C--CCEEEccccCCHHHhCcccCCccc------ccccCCCEEEeCcCc
Confidence            3557889999999999999999864 3  489999999999999886443110      012234588999763

rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=89.06  E-value=10  Score=32.08  Aligned_cols=200  Identities=15%  Similarity=0.165  Sum_probs=115.3

Q ss_pred             CCeEEecchhh---HHHHHHhccCCcCceEEeeccccCCCCCCCccchH-HHHHhhcC--CCCCceEEEeeccccccc--
Q 022615           34 ADLTLVPSVAI---GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNG--EPDKPLIVHVGRLGVEKS--  105 (294)
Q Consensus        34 ad~ii~~s~~~---~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~-~~~~~~~~--~~~~~~i~~~G~~~~~k~--  105 (294)
                      .|.|.+.-+..   ..+++....   .++.++|.--++.++......-. ...+++..  .+...+-+|--++.-.|.  
T Consensus       130 yD~VW~lPq~~~~~~~yl~~l~r---~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~  206 (364)
T PF10933_consen  130 YDEVWTLPQFENTCAPYLETLHR---CPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCF  206 (364)
T ss_pred             CceeEeccchhhhchHHHHHHhc---CCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecC
Confidence            47777654422   344555443   35677776444333321110000 00011111  223334556566666665  


Q ss_pred             -HHHHH-HHHHhCCC-cEEEEEcCC---ccHHHHHhhhc------CCCeEEEecccchhHHHHHhc-CCEEEeecCCCCc
Q 022615          106 -LDFLK-RVMDRLPE-ARIAFIGDG---PYREELEKMFT------GMPAVFTGMLLGEELSQAYAS-GDVFVMPSESETL  172 (294)
Q Consensus       106 -~~~l~-~~~~~~~~-~~l~i~G~~---~~~~~~~~~~~------~~~v~~~g~~~~~~~~~~~~~-ad~~l~ps~~e~~  172 (294)
                       ..+++ ++.+.-|+ +..+.+-+.   .+...+...+.      .....|.|+.   +++.+++. .|++|.=-+-.+.
T Consensus       207 ~PmLi~E~aYR~~P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHqWeN~l  283 (364)
T PF10933_consen  207 IPMLICEEAYRADPDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQWENPL  283 (364)
T ss_pred             ccHHHHHHHHHhChhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEeccccchh
Confidence             23333 45566665 333333321   12223333332      3346677765   44555544 5888876666678


Q ss_pred             chHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHhCCHH
Q 022615          173 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWR  249 (294)
Q Consensus       173 ~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~  249 (294)
                      ..-.+|++.-|=|.|-.     ..++     ++.|+.++..|..+=+++|.+.+. .+...+...+.+++.+..++..
T Consensus       284 NYlY~daLyggYPLVHN-----S~~l-----~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~  351 (364)
T PF10933_consen  284 NYLYYDALYGGYPLVHN-----SPLL-----KDVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPE  351 (364)
T ss_pred             hHHHHHHHhcCCCcccC-----cchh-----cccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCC
Confidence            88899999999999974     5566     458999999999999999988886 4556778888888888765543

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=86.02  E-value=6  Score=35.35  Aligned_cols=125  Identities=18%  Similarity=0.174  Sum_probs=71.6

Q ss_pred             eEEEecccchhHHHHHhcCCEEEe-ecC-----CCCcchHHHHHHhcC-CCEEeecCC--CcccccccCCCCcceeecCC
Q 022615          142 AVFTGMLLGEELSQAYASGDVFVM-PSE-----SETLGLVVLEAMSSG-IPVVGVRAG--GIPDIIPEDQDGKIGYLFNP  212 (294)
Q Consensus       142 v~~~g~~~~~~~~~~~~~ad~~l~-ps~-----~e~~~~~~~Ea~a~G-~pvI~~~~~--~~~e~~~~~~~~~~g~~~~~  212 (294)
                      ....|.-  ++-.++++.+.+.+. |..     .+++-..++||+..| +|||.++.-  .+.+++   .=....+..+.
T Consensus       401 walcg~~--~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~i---dWrraal~lPk  475 (907)
T KOG2264|consen  401 WALCGER--ERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLI---DWRRAALRLPK  475 (907)
T ss_pred             hhhccch--HHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHH---HHHHHhhhCCc
Confidence            3445554  777899999987665 321     456677799999999 677776542  445555   22334444443


Q ss_pred             CCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhhcccchHH
Q 022615          213 GDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQ  279 (294)
Q Consensus       213 ~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  279 (294)
                      .-..+.. -+.+.+.|.+ .-.|+..+     ++-|+.....-. .+.+.+++.-+.+-+-..+|++
T Consensus       476 aR~tE~H-Fllrs~~dsD-ll~mRRqG-----Rl~wEtYls~~~-~~~~tvlA~lR~rlqIP~rpvr  534 (907)
T KOG2264|consen  476 ARLTEAH-FLLRSFEDSD-LLEMRRQG-----RLFWETYLSDRH-LLARTVLAALRYRLQIPTRPVR  534 (907)
T ss_pred             cccchHH-HHHHhcchhh-HHHHHhhh-----hhhHHHHhhHHH-HHHHHHHHHHHHhhCCCCcccc
Confidence            3333332 2333334433 34455444     355666666665 7788887776555444444443

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=84.47  E-value=17  Score=28.26  Aligned_cols=77  Identities=10%  Similarity=0.064  Sum_probs=49.1

Q ss_pred             CcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccc
Q 022615          118 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI  197 (294)
Q Consensus       118 ~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~  197 (294)
                      +.++.++.. ...+.+.++.....+.+....   -....+..+|+++..+..+.....+.+....|++|-+.+.+...++
T Consensus        33 ga~V~VIs~-~~~~~l~~l~~~~~i~~~~~~---~~~~~l~~adlViaaT~d~elN~~i~~~a~~~~lvn~~d~~~~~~f  108 (202)
T PRK06718         33 GAHIVVISP-ELTENLVKLVEEGKIRWKQKE---FEPSDIVDAFLVIAATNDPRVNEQVKEDLPENALFNVITDAESGNV  108 (202)
T ss_pred             CCeEEEEcC-CCCHHHHHHHhCCCEEEEecC---CChhhcCCceEEEEcCCCHHHHHHHHHHHHhCCcEEECCCCccCeE
Confidence            356777764 233455556555455554332   1234567899988887766667777777778888877777666665


Q ss_pred             c
Q 022615          198 I  198 (294)
Q Consensus       198 ~  198 (294)
                      +
T Consensus       109 ~  109 (202)
T PRK06718        109 V  109 (202)
T ss_pred             E
Confidence            5

>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=83.18  E-value=17  Score=31.11  Aligned_cols=83  Identities=12%  Similarity=0.061  Sum_probs=55.9

Q ss_pred             cchhHHHHHhcCCEEEeecC--C-CCcchHHHHHHhcC-CCEEeecCCCcccccccCCCCccee-ecCCCCHHHHHHHHH
Q 022615          149 LGEELSQAYASGDVFVMPSE--S-ETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPEDQDGKIGY-LFNPGDLDDCLSKLE  223 (294)
Q Consensus       149 ~~~~~~~~~~~ad~~l~ps~--~-e~~~~~~~Ea~a~G-~pvI~~~~~~~~e~~~~~~~~~~g~-~~~~~d~~~l~~~i~  223 (294)
                      +...+...++...++|.--.  . +-..-|+.-|+-+| +||+... +...++++    ...-+ +-+..+++++++.|+
T Consensus       240 ~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~-~n~e~fvP----~~SfI~vdDF~s~~ela~ylk  314 (372)
T KOG2619|consen  240 PSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGP-PNYENFVP----PDSFIHVDDFQSPQELAAYLK  314 (372)
T ss_pred             CCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECC-ccccccCC----CcceEehhhcCCHHHHHHHHH
Confidence            34567777778888876422  2 23466777788888 6666655 66777772    22222 334568999999999


Q ss_pred             HHhhChHHHHHHH
Q 022615          224 PLLYNQELRETMG  236 (294)
Q Consensus       224 ~ll~~~~~~~~~~  236 (294)
                      ++-+|+..+.+.-
T Consensus       315 ~L~~n~~~Y~~Yf  327 (372)
T KOG2619|consen  315 KLDKNPAAYLSYF  327 (372)
T ss_pred             HhhcCHHHHHHHH
Confidence            9999988776543

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=83.08  E-value=10  Score=32.50  Aligned_cols=92  Identities=12%  Similarity=0.074  Sum_probs=60.6

Q ss_pred             CCCceEEEeecccccccHHHHHHHHHhCCC-cEEEEEcCCccHHHHHhhhc-------------CCCeEEEecccchhHH
Q 022615           89 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPE-ARIAFIGDGPYREELEKMFT-------------GMPAVFTGMLLGEELS  154 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~-~~l~i~G~~~~~~~~~~~~~-------------~~~v~~~g~~~~~~~~  154 (294)
                      ++...|..++.-  .-.+..+++++...+. +.+.+.+ |.-...+.....             ...+.++++++++++.
T Consensus       182 ~~~~~vslF~Ye--~~~l~~ll~~~~~~~~pv~llvp~-g~~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD  258 (374)
T PF10093_consen  182 PGALRVSLFCYE--NAALASLLDAWAASPKPVHLLVPE-GRALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYD  258 (374)
T ss_pred             CCCeEEEEEeCC--chHHHHHHHHHhcCCCCeEEEecC-CccHHHHHHHhccccccCccccccCCeEEEECCCCCHHHHH
Confidence            344455544422  1227888888887754 4454444 333334432221             1138899999999999


Q ss_pred             HHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEe
Q 022615          155 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  188 (294)
Q Consensus       155 ~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~  188 (294)
                      +++..||+.+.-.     --+++-|.-+|+|.|=
T Consensus       259 ~LLw~cD~NfVRG-----EDSfVRAqwAgkPFvW  287 (374)
T PF10093_consen  259 RLLWACDFNFVRG-----EDSFVRAQWAGKPFVW  287 (374)
T ss_pred             HHHHhCccceEec-----chHHHHHHHhCCCceE
Confidence            9999999987643     2458899999999984

The function is unknown.

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=81.72  E-value=16  Score=30.01  Aligned_cols=80  Identities=13%  Similarity=0.149  Sum_probs=54.4

Q ss_pred             cHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcC-------------CCeEEEecccchhHHHHHhcCCEEEeecCCCC
Q 022615          105 SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTG-------------MPAVFTGMLLGEELSQAYASGDVFVMPSESET  171 (294)
Q Consensus       105 ~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~-------------~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~  171 (294)
                      .+..+++.+++...-.+.++-.|.....+.+....             ..+..+++++++++.+++..||+-+.-.    
T Consensus       190 a~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~n~VRG----  265 (370)
T COG4394         190 ALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDFNLVRG----  265 (370)
T ss_pred             chHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhcccceeec----
Confidence            46667777777654444444434333444443321             1377899999999999999999987653    


Q ss_pred             cchHHHHHHhcCCCEEee
Q 022615          172 LGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       172 ~~~~~~Ea~a~G~pvI~~  189 (294)
                       --++.-|..+|+|.+=.
T Consensus       266 -EDSFVRAq~agkPflWH  282 (370)
T COG4394         266 -EDSFVRAQLAGKPFLWH  282 (370)
T ss_pred             -chHHHHHHHcCCCcEEE
Confidence             34688999999998743

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=80.84  E-value=34  Score=29.07  Aligned_cols=136  Identities=12%  Similarity=0.066  Sum_probs=66.6

Q ss_pred             hCCCcEEEEEcCCccHHHHHhhhcCCC---eEEEec----ccchhHH----HHHhcCCEEEeecC--CCCcchHHHHHHh
Q 022615          115 RLPEARIAFIGDGPYREELEKMFTGMP---AVFTGM----LLGEELS----QAYASGDVFVMPSE--SETLGLVVLEAMS  181 (294)
Q Consensus       115 ~~~~~~l~i~G~~~~~~~~~~~~~~~~---v~~~g~----~~~~~~~----~~~~~ad~~l~ps~--~e~~~~~~~Ea~a  181 (294)
                      .+.+.++.++|.|...+...+.+...+   +.+..+    .+.+++.    .+...+|+++..+.  ....|....|.+.
T Consensus       171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~~~~~  250 (338)
T PRK00676        171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHLSWESLA  250 (338)
T ss_pred             CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCceeeHHHHh
Confidence            345679999999987766555554433   444332    2344443    66789999998642  2233444455544


Q ss_pred             cCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022615          182 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       182 ~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      --.+-+.-|..-.+++=+ .....+..++   |.+++.+.+.+   +...+++....+...++     ..+.+++ +.|+
T Consensus       251 ~~~~r~~iDLAvPRdId~-v~~~~~v~Ly---~iDdL~~i~~~---n~~~R~~~~~~ae~iI~-----~~~~~~~-~~~~  317 (338)
T PRK00676        251 DIPDRIVFDFNVPRTFPW-SETPFPHRYL---DMDFISEWVQK---HLQCRKEVNNKHKLSLR-----EAAYKQW-ESYE  317 (338)
T ss_pred             hccCcEEEEecCCCCCcc-ccccCCcEEE---EhHHHHHHHHH---HHHHHHHHHHHHHHHHH-----HHHHHHH-HHHH
Confidence            222124444443333210 0122233344   45555444433   22233444444444433     3445555 4555


Q ss_pred             HH
Q 022615          262 AA  263 (294)
Q Consensus       262 ~~  263 (294)
                      +-
T Consensus       318 ~~  319 (338)
T PRK00676        318 KK  319 (338)
T ss_pred             HH
Confidence            43

>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS

Probab=80.54  E-value=11  Score=32.73  Aligned_cols=87  Identities=10%  Similarity=-0.028  Sum_probs=59.3

Q ss_pred             CcchHHHHHHhcCCCEEeecCC---CcccccccCCCCcceeecCC-CCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHh-
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAG---GIPDIIPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-  245 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~---~~~e~~~~~~~~~~g~~~~~-~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~-  245 (294)
                      +++..+.--|+||-.|+..+..   .+.+.+   ....+-+-+.. ++..++.++|..+.++++..+++++++++++++ 
T Consensus       225 ~~S~RlkylL~c~SvVl~~~~~~~e~f~~~L---~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~  301 (395)
T PF05686_consen  225 AWSGRLKYLLACNSVVLKVKSPYYEFFYRAL---KPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREY  301 (395)
T ss_pred             eeehhHHHHHcCCceEEEeCCcHHHHHHhhh---cccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHH
Confidence            4456666679999998875432   122223   33444444443 478999999999989999999999999999854 


Q ss_pred             CCHHHHHHHHHHHHHH
Q 022615          246 YDWRAATRTIRNEQYN  261 (294)
Q Consensus       246 ~s~~~~~~~~~~~l~~  261 (294)
                      .+.+.+..=+. .+..
T Consensus       302 L~~~~~~~Y~~-~LL~  316 (395)
T PF05686_consen  302 LTMEDVYCYWR-RLLL  316 (395)
T ss_pred             hhhhHHHHHHH-HHHH
Confidence            77766655444 4443

This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	294
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		8e-16
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		1e-15
3c4q_A	426	Structure Of The Retaining Glycosyltransferase Msha		8e-13
3c48_A	438	Structure Of The Retaining Glycosyltransferase Msha		8e-13
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		6e-10
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		6e-10
2x6q_A	416	Crystal Structure Of Trehalose Synthase Tret From P		7e-08
2xmp_A	416	Crystal Structure Of Trehalose Synthase Tret Mutant		3e-07
2r60_A	499	Structure Of Apo Sucrose Phosphate Synthase (Sps) O		3e-07
2gej_A	406	Crystal Structure Of Phosphatidylinositol Mannosylt		7e-07
2xa1_A	416	Crystal Structure Of Trehalose Synthase Tret From P		1e-06
3vue_A	536	Crystal Structure Of Rice Granule Bound Starch Synt		2e-06
2iw1_A	374	Crystal Structure Of Waag, A Glycosyltransferase In		3e-05
3fro_A	439	Crystal Structure Of Pyrococcus Abyssi Glycogen Syn		4e-05
2bis_A	440	Structure Of Glycogen Synthase From Pyrococcus Abys		4e-05
3l01_A	428	Crystal Structure Of Monomeric Glycogen Synthase Fr		5e-05
2f9f_A	177	Crystal Structure Of The Putative Mannosyl Transfer		8e-05
2bfw_A	200	Structure Of The C Domain Of Glycogen Synthase From		1e-04

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 118 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSESETLGLV 175
           +A++  +GDGP    + ++   +      + LG++  +++  A  D+ ++ SE E+ GLV
Sbjct: 241 DAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLV 300
Query: 176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM 235
           +LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL ++EL   M
Sbjct: 301 LLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNM 357
Query: 236 GQAARQEM 243
           G+ AR+ +
Sbjct: 358 GERARESV 365

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 118 EARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSESETLGLV 175
           +A++  +GDGP    + ++   +      + LG++  +++  A  D+ ++ SE E+ GLV
Sbjct: 261 DAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLV 320
Query: 176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM 235
           +LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL ++EL   M
Sbjct: 321 LLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNM 377
Query: 236 GQAARQEM 243
           G+ AR+ +
Sbjct: 378 GERARESV 385

>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 57  NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 111
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 188 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 247
Query: 112 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 161
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 248 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 307
Query: 162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 221
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 308 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 367
Query: 222 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 264
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 368 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 406

>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 57  NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 111
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 208 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 267
Query: 112 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 161
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 268 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 327
Query: 162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 221
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 328 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 387
Query: 222 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 264
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 388 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 426

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 64  KGVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PE 118
            GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD 229
Query: 119 ARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES------- 169
           A++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       
Sbjct: 230 AQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDV 289
Query: 170 ETLGLVVLEAMSSGIPVVGVRAGGIPDII 198
           E LG+V LEA + G+PV+   +GG P+ +
Sbjct: 290 EGLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 64  KGVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PE 118
            GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD 229
Query: 119 ARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES------- 169
           A++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       
Sbjct: 230 AQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDV 289
Query: 170 ETLGLVVLEAMSSGIPVVGVRAGGIPDII 198
           E LG+V LEA + G+PV+   +GG P+ +
Sbjct: 290 EGLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 88  EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 134
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 135 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 191
           K+           L+G    E++    + DV +  S  E  GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 192 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 245
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 88  EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 134
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 135 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 191
           K+           L+G    E++    + DV +  S     GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRAGFGLTVTEAMWKGKPVIGRAV 347
Query: 192 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 245
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 151 EELSQAYA----SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 206
           +EL+  YA     G VF + S  E  GL  +EAM+SG+P V  R GG  +I+     GK 
Sbjct: 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKY 402
Query: 207 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR 253
           G L +P D +D    L     ++E      +  +Q + E+Y W+   R
Sbjct: 403 GVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETAR 450

>pdb|2GEJ|A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man Length = 406

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 64  KGVDSESF--------HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR 115
            GVD  SF        +PR    E R  L  G  D+P      R G+   L  L +++ R
Sbjct: 188 NGVDVASFADAPLLDGYPR----EGRTVLFLGRYDEP------RKGMAVLLAALPKLVAR 237
Query: 116 LPEARIAFIGDGPYREELEKMFTGMPAV--FTGMLLGEELSQAYASGDVFVMPS-ESETL 172
            P+  I  +G G   +EL +    +     F G +     + A  S DV+  P    E+ 
Sbjct: 238 FPDVEILIVGRGD-EDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESF 296
Query: 173 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELR 232
           G+V++EAM++G  VV         ++    DG  G L    D D   + L  +L + +LR
Sbjct: 297 GIVLVEAMAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQLR 353
Query: 233 ETMGQAARQEMEKYDWRAATRTI 255
                 A + + +YDW   +  I
Sbjct: 354 AGYVARASERVHRYDWSVVSAQI 376

>pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 88  EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 134
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVXAHDDPEGWIYFEKTLR 287
Query: 135 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 191
           K+           L+G    E++    + DV +  S  E  GL V EA   G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQXSIREGFGLTVTEAXWKGKPVIGRAV 347
Query: 192 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 245
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ +  G  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEXGAKAKERVRK 396

>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 92  PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML--- 148
           PLI  +GRL  +K  D +   +  L +  +  +  G  +++ EK+   M   + G +   
Sbjct: 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAV 387
Query: 149 --LGEELSQAYASG-DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGK 205
                 L+    +G DV  +PS  E  GL+ L+ M  G P      GG+ D + E + G 
Sbjct: 388 VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTG- 446
Query: 206 IGYLFNPGDLD-DC 218
               F+ G L  DC
Sbjct: 447 ----FHMGRLSVDC 456

>pdb|2IW1|A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved In Lipopolysaccharide Biosynthesis Length = 374

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 82  WRLSNG-EPDKPLIVHVG----RLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREELE 134
           +R  NG +  + L++ VG    R GV++S++ L  + + L    + F+   D P + E  
Sbjct: 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEAL 245
Query: 135 KMFTGMPA---VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 191
               G+ +    F+G     ++S+  A+ D+ + P+  E  G+V+LEA+++G+PV+    
Sbjct: 246 AEKLGVRSNVHFFSGR---NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV 302
Query: 192 GGIPDIIPEDQDGK-IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 247
            G    I +   G  I   F+   L++ L K    L    LR    + AR   +  D
Sbjct: 303 CGYAHYIADANCGTVIAEPFSQEQLNEVLRK---ALTQSPLRMAWAENARHYADTQD 356

>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 57  NKIRIWKKGVD----SESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLK 110
            KI     G+D    +ES+    R    +  LS  G  +    + +GR    +K +D L 
Sbjct: 212 GKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLL 271
Query: 111 RVMDRLP------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYAS 159
           + ++ L       E R   IG G      +   LE+   G   V T ML  E + + Y S
Sbjct: 272 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGS 330
Query: 160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL 219
            D  ++PS  E  GLV LEAM  G   +    GG+ DII  ++ G +    +PG+L + +
Sbjct: 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAI 389
Query: 220 SK 221
            K
Sbjct: 390 LK 391

>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 57  NKIRIWKKGVD----SESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLK 110
            KI     G+D    +ES+    R    +  LS  G  +    + +GR    +K +D L 
Sbjct: 213 GKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLL 272
Query: 111 RVMDRLP------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYAS 159
           + ++ L       E R   IG G      +   LE+   G   V T ML  E + + Y S
Sbjct: 273 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGS 331
Query: 160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL 219
            D  ++PS  E  GLV LEAM  G   +    GG+ DII  ++ G +    +PG+L + +
Sbjct: 332 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAI 390
Query: 220 SK 221
            K
Sbjct: 391 LK 392

>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 57  NKIRIWKKGVD----SESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLK 110
            KI     G+D    +ES+    R    +  LS  G  +    + +GR    +K +D L 
Sbjct: 212 GKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLL 271
Query: 111 RVMDRLP------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYAS 159
           + ++ L       E R   IG G      +   LE+   G   V T ML  E + + Y S
Sbjct: 272 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGS 330
Query: 160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL 219
            D  ++PS  E  GLV LEAM  G   +    GG+ DII  ++ G +    +PG+L + +
Sbjct: 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAI 389
Query: 220 SK 221
            K
Sbjct: 390 LK 391

>pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a Length = 177

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 95  VHVGRLGVEKSLDFLKRVMDRLPEARIAFIG---DGPYREELEKMFTGMP---AVFTGML 148
           + V R+  EK ++    V  +L + ++  +G    G + E   +    +      F G +
Sbjct: 27  LSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIXKIAPDNVKFLGSV 86
Query: 149 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY 208
             EEL   Y+     +  ++ E  GL  +EA +SG PV+ V  GG  + +  +   K GY
Sbjct: 87  SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAXASGKPVIAVNEGGFKETVINE---KTGY 143
Query: 209 LFN 211
           L N
Sbjct: 144 LVN 146

>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 103 EKSLDFLKRVMDRLP------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGE 151
           +K +D L + ++ L       E R   IG G      +   LE+   G   V T ML  E
Sbjct: 49  QKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKH-GNVKVITEMLSRE 107
Query: 152 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN 211
            + + Y S D  ++PS  E  GLV LEAM  G   +    GG+ DII  ++ G +    +
Sbjct: 108 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGD 166
Query: 212 PGDLDDCLSK 221
           PG+L + + K
Sbjct: 167 PGELANAILK 176

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	294
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	1e-55
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	1e-55
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	1e-50
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	2e-44
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	1e-43
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	2e-43
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	3e-42
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	1e-39
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	9e-34
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	4e-31
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	3e-30
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	1e-26
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	6e-20
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	8e-19
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	7e-15
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	5e-14
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	6e-13
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	2e-10
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	6e-07

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  184 bits (468), Expect = 1e-55
 Identities = 56/274 (20%), Positives = 95/274 (34%), Gaps = 36/274 (13%)

Query: 2   SYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN---- 57
           ++HT     +    F  +++P        H      +  S       + AR         
Sbjct: 136 TFHTSTTKSLTLSVFQGILRP-------YHEKIIGRIAVS-------DLARRWQMEALGS 181

Query: 58  KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFL----KRV 112
                  GVD  SF                  +   ++ +GR     K +  L     ++
Sbjct: 182 DAVEIPNGVDVASFADAPLLDGYP-------REGRTVLFLGRYDEPRKGMAVLLAALPKL 234

Query: 113 MDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPS-ESE 170
           + R P+  I  +G G   E  E+       + F G +     + A  S DV+  P    E
Sbjct: 235 VARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGE 294

Query: 171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE 230
           + G+V++EAM++G  VV         ++    DG  G L    D D   + L  +L + +
Sbjct: 295 SFGIVLVEAMAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQ 351

Query: 231 LRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 264
           LR      A + + +YDW   +  I    Y    
Sbjct: 352 LRAGYVARASERVHRYDWSVVSAQIM-RVYETVS 384

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  183 bits (467), Expect = 1e-55
 Identities = 63/272 (23%), Positives = 105/272 (38%), Gaps = 28/272 (10%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
            S H H            ++      ++ +    D+    S    +  ++A  +      
Sbjct: 115 ASTHGHEV-------GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHP-TFE 166

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDR 115
               GVD + F P     +   R   G     P+I    RL   K  D L     +V+  
Sbjct: 167 HLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAA 226

Query: 116 LPEARIAFIGDGPYREELEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPS------ 167
            P+A++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+      
Sbjct: 227 RPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGG 286

Query: 168 -ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL 226
            + E LG+V LEA + G+PV+   +GG P+ +        G +    D+D     L  LL
Sbjct: 287 LDVEGLGIVYLEAQACGVPVIAGTSGGAPETV---TPAT-GLVVEGSDVDKLSELLIELL 342

Query: 227 YNQELRETMGQAARQEME-KYDWRA-ATRTIR 256
            +   R  MG A R  +E ++ W     R   
Sbjct: 343 DDPIRRAAMGAAGRAHVEAEWSWEIMGERLTN 374

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  170 bits (433), Expect = 1e-50
 Identities = 56/285 (19%), Positives = 116/285 (40%), Gaps = 29/285 (10%)

Query: 3   YHTHVPV-------YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 55
               + +        I        +  +   I+F    +D+    S ++  +        
Sbjct: 122 IGERIKIVTTLHGTDITVLGSDPSLNNL---IRFGIEQSDVVTAVSHSLINETHELVKPN 178

Query: 56  ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR 115
              I+     +D   +  R  +   +         + +++H+      K +  + +   +
Sbjct: 179 -KDIQTVYNFIDERVYFKRDMTQLKKEY--GISESEKILIHISNFRKVKRVQDVVQAFAK 235

Query: 116 L---PEARIAFIGDGPYREELEKMFTGM---PAV-FTGMLLGEELSQAYASGDVFVMPSE 168
           +    +A++  +GDGP    + ++   +     V F G    + +++  A  D+ ++ SE
Sbjct: 236 IVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSE 293

Query: 169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 228
            E+ GLV+LEAM+ G+P +G R GGIP++I   Q G  GYL   GD      +   LL +
Sbjct: 294 KESFGLVLLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKD 350

Query: 229 QELRETMGQAARQE-MEKYDW-RAATRTIRNEQYNAAIWFWRKKR 271
           +EL   MG+ AR+   E++   +  ++      Y   +   +  +
Sbjct: 351 EELHRNMGERARESVYEQFRSEKIVSQYE--TIYYDVLRDDKNGK 393

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  155 bits (394), Expect = 2e-44
 Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 21/253 (8%)

Query: 28  KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG 87
           + L   AD+  V +    +DL        ++I +   G D E + P    +  R R   G
Sbjct: 179 QQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG 238

Query: 88  -EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFI------GDGPYREELEKM 136
                 ++  VGRL    G +  +  +  + DR P+  +  I      G     +    M
Sbjct: 239 IPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHM 298

Query: 137 FTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 192
              +       F       EL   Y + D+  +PS +E+ GLV +EA +SG PV+  R G
Sbjct: 299 AEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG 358

Query: 193 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW-RAA 251
           G+P  +    +G+ G L +          L  LL + E R  MG+ A +    + W   A
Sbjct: 359 GLPIAV---AEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATA 415

Query: 252 TRTIRNEQYNAAI 264
            +      YN AI
Sbjct: 416 AQLS--SLYNDAI 426

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score =  145 bits (369), Expect = 1e-43
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 9/167 (5%)

Query: 92  PLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGMP-AVFTGM 147
             I  VGR   EK+   L + +       +  +   G GP  ++++ +   +      G 
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF 62

Query: 148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKI 206
           +   EL +   +  ++V  +  E+  +  LEA+S GI  V   +          D+    
Sbjct: 63  VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE---- 118

Query: 207 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 253
             LF P +  D  +K++  L N+  RE M     +    Y    +  
Sbjct: 119 RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVI 165

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  150 bits (382), Expect = 2e-43
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 24/263 (9%)

Query: 4   HTHVPVYIPRY-TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
              +     RY  ++   +       F    +   ++ +     D +    T   + +I 
Sbjct: 111 KGFLYRLTSRYRHYAAFERAT-----FEQGKSTKLMMLTDKQIADFQKHYQTEPERFQIL 165

Query: 63  KKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDR 115
             G+  +  +           R +    +  + L++ VG     K +D        + + 
Sbjct: 166 PPGIYPDRKYSEQIPNSREIYRQKN-GIKEQQNLLLQVGSDFGRKGVDRSIEALASLPES 224

Query: 116 LPEARIAFIGDGPYREELEKMFT--GMPA--VFTGMLLGEELSQAYASGDVFVMPSESET 171
           L    + F+       + E +    G+ +   F       ++S+  A+ D+ + P+  E 
Sbjct: 225 LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEA 282

Query: 172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQE 230
            G+V+LEA+++G+PV+     G    I    D   G +   P   +     L   L    
Sbjct: 283 AGIVLLEAITAGLPVLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSP 339

Query: 231 LRETMGQAARQEMEKYDWRAATR 253
           LR    + AR   +  D  +   
Sbjct: 340 LRMAWAENARHYADTQDLYSLPE 362

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  149 bits (377), Expect = 3e-42
 Identities = 56/275 (20%), Positives = 106/275 (38%), Gaps = 38/275 (13%)

Query: 3   YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 62
           +  H+ +  P   F   ++      +F+ +           +  +L+       NK  I 
Sbjct: 152 WRCHIDLSSPNREFWEFLR------RFVEKYDRYIFHLPEYVQPELDR------NKAVIM 199

Query: 63  KKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSLDFL----KRVMDR 115
              +D  S            R+      +P+KP+I  V R    K +  +    ++V ++
Sbjct: 200 PPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEK 259

Query: 116 LPEARIAFIGDGP---------YREELEKMFTGMPAVFTGMLLG---EELSQAYASGDVF 163
           +P  ++  +G            + + L K+           L+G    E++    + DV 
Sbjct: 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVI 319

Query: 164 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE 223
           +  S  E  GL V EAM  G PV+G   GGI   I    DG+ G+L    D ++ +  + 
Sbjct: 320 LQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQI---VDGETGFLVR--DANEAVEVVL 374

Query: 224 PLLYNQELRETMGQAARQE-MEKYDW-RAATRTIR 256
            LL + E+ + MG  A++   + +   +   R + 
Sbjct: 375 YLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score =  135 bits (343), Expect = 1e-39
 Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 25/184 (13%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 124
            V++  F  +                    + V R+  EK ++    V  +L + ++  +
Sbjct: 11  PVETSKFKFK--------------CYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIV 56

Query: 125 GDGPYREELEKMFTGMPA------VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 178
           G     +  E+    +         F G +  EEL   Y+     +  ++ E  GL  +E
Sbjct: 57  GWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIE 116

Query: 179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE-LRETMGQ 237
           AM+SG PV+ V  GG  + +    + K GYL N  D+++ +  ++ +  N +  ++   +
Sbjct: 117 AMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPDKFKKDCFR 172

Query: 238 AARQ 241
            A++
Sbjct: 173 RAKE 176

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score =  127 bits (321), Expect = 9e-34
 Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 42/230 (18%)

Query: 65  GVDSESFHPRFR-------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP 117
           GV++  F   +        +  +   L +   + P I+   RL  +K+   L     +  
Sbjct: 229 GVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNK 288

Query: 118 EAR-------IAFIGDGPYREELEKMFTGMPAV------------------FTGMLLGEE 152
           E +            + P  E+  +       +                     +   +E
Sbjct: 289 ELQDKANLVLTLRGIENP-FEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQE 347

Query: 153 LSQAY----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY 208
           L+  Y    + G VF + S  E  GL  +EAM+SG+P V  R GG  +I+     GK G 
Sbjct: 348 LAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKYGV 404

Query: 209 LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDW-RAATRTIR 256
           L +P D +D    L     ++E      +  +Q   E+Y W   A   + 
Sbjct: 405 LVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLE 454

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score =  119 bits (298), Expect = 4e-31
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 16/200 (8%)

Query: 65  GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK--------SLDFLKRVMDRL 116
             D   F P+  +  ++  +++    + +I+  GR  V++        +L    +  DR 
Sbjct: 216 FTDEYFFQPKINT-TLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS 274

Query: 117 PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV 176
            E +I  +G+      L K          G L  E+ +       + +    S       
Sbjct: 275 NEWKIISVGEKHKDIALGKGI---HLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPP 331

Query: 177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 236
           LE    G+ V+  +                       + ++    L  L  +   R+   
Sbjct: 332 LEMAHFGLRVITNKYENKDLSN----WHSNIVSLEQLNPENIAETLVELCMSFNNRDVDK 387

Query: 237 QAARQEMEKYDWRAATRTIR 256
           + +   M   +       I+
Sbjct: 388 KESSNMMFYINEFNEFSFIK 407

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score =  118 bits (298), Expect = 3e-30
 Identities = 52/284 (18%), Positives = 89/284 (31%), Gaps = 59/284 (20%)

Query: 56  ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG-------------------EPDKPLIVH 96
             K  I   G D   + P         +  +                    +  KP++  
Sbjct: 518 DPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFT 577

Query: 97  VGRLGVEKSLDFLKRVMDRL----PEARIAFIG--------DGPYREELEKM-------- 136
           + RL   K+L  L     +       A +  +G        D   + E++KM        
Sbjct: 578 MARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637

Query: 137 ----FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 192
               F  + +    +  GE       +   FV P+  E  GL V+EAM+ G+P      G
Sbjct: 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697

Query: 193 GIPDIIPEDQDGKIGYLFNPGDLDD----CLSKLEPLLYNQELRETMGQAARQE-MEKYD 247
           G  +II     GK G+  +P   D               +    + + +   Q   EKY 
Sbjct: 698 GPAEII---VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYT 754

Query: 248 WRA-ATRTIRNEQYNAAIWFWRK----KRAQLLRPIQWLAKRIF 286
           W+  + R +          FW+      R +  R ++      +
Sbjct: 755 WQIYSQRLL--TLT-GVYGFWKHVSNLDRLEARRYLEMFYALKY 795

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score =  107 bits (267), Expect = 1e-26
 Identities = 51/307 (16%), Positives = 98/307 (31%), Gaps = 45/307 (14%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 60
           M   +H    +             L   F H      +  S     D+          I 
Sbjct: 101 MGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYGCK--VPIN 158

Query: 61  IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRL 116
           I    VD+++ +   +   +         D  L +++ R    K LD       R + + 
Sbjct: 159 IVSHFVDTKTIYDARKLVGLSEY-----NDDVLFLNMNRNTARKRLDIYVLAAARFISKY 213

Query: 117 PEARIAFIGDGP---------------YREELEKMFTGMPAV--FTGMLLGEELSQAYAS 159
           P+A++ F+ +                     ++ +FT +  +     +L  E +   Y +
Sbjct: 214 PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNA 273

Query: 160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--------------QDGK 205
            DV V  S  E  GL   E    G P++    GG  D    D                  
Sbjct: 274 CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDG 333

Query: 206 IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI 264
           IG +    D+DD +        +++ R+  G+  +  +  K  W   +  I  + +N+ +
Sbjct: 334 IGGIEGIIDVDDLVEAFT-FFKDEKNRKEYGKRVQDFVKTKPTWDDISSDI-IDFFNSLL 391

Query: 265 WFWRKKR 271
               ++ 
Sbjct: 392 RVESRET 398

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score = 87.5 bits (217), Expect = 6e-20
 Identities = 40/268 (14%), Positives = 71/268 (26%), Gaps = 41/268 (15%)

Query: 4   HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK 63
           H H    +                   H                 + A     +   +  
Sbjct: 89  HDHSG-GVIGPAGLPPGTAFISS---HHFTTRPVNPVGCTYSSRAQRAHCGGGDDAPVIP 144

Query: 64  KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF 123
             VD   +             ++    +  ++ +GR+   K               R+  
Sbjct: 145 IPVDPARYRSA----------ADQVAKEDFLLFMGRVSPHKGALEAAAFA-HACGRRLVL 193

Query: 124 IGDGPYREELEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPSES----------ET 171
            G     E  +++     +     G + GE      AS    +  S++          E 
Sbjct: 194 AGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEP 253

Query: 172 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL--FNPGDLDDCLSKLEPLLYNQ 229
              VV EA  SG PVVG   G + +I+       +GY   F P +    L+ L       
Sbjct: 254 GATVVSEAAVSGTPVVGTGNGCLAEIV-PSVGEVVGYGTDFAPDEARRTLAGLPAS---- 308

Query: 230 ELRETMGQAARQEMEKYDWRA-ATRTIR 256
                  +  R  +  +     A R + 
Sbjct: 309 ------DEVRRAAVRLWGHVTIAERYVE 330

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 81.4 bits (202), Expect = 8e-19
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 33/200 (16%)

Query: 65  GVDSESFHPRFRSS-------EMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL 116
           G+D   ++  + +         +  +   G  +    + +GR    +K +D L + ++ L
Sbjct: 5   GIDCSFWNESYLTGSRDERKKSLLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEIL 62

Query: 117 ------PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-----EELS-QAYASGDVFV 164
                  E R   IG G    ELE     +      + +       E   + Y S D  +
Sbjct: 63  SSKKEFQEMRFIIIGKG--DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVI 120

Query: 165 MPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL 222
           +PS  E  GLV LEAM  G IP+    A GG+ DII    +   G L   GD  +  + +
Sbjct: 121 IPSYFEPFGLVALEAMCLGAIPI--ASAVGGLRDII---TNET-GILVKAGDPGELANAI 174

Query: 223 E-PLLYNQELRETMGQAARQ 241
              L  ++       +  ++
Sbjct: 175 LKALELSRSDLSKFRENCKK 194

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485

 Score = 73.3 bits (181), Expect = 7e-15
 Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 27/186 (14%)

Query: 88  EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFT 145
           +   PL   + RL  +K +D +   +D +     R+  +G G     LE       +   
Sbjct: 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAG--DVALEGALLAAASRHH 345

Query: 146 GML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD- 196
           G +   +G  E LS    A  D  ++PS  E  GL  L A+  G IPV  V   GG+ D 
Sbjct: 346 GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV--VARTGGLADT 403

Query: 197 IIPEDQDGKI-----GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YD 247
           +I  +          G  F       L   + +     ++ +L   M +     M+    
Sbjct: 404 VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG---MKSDVS 460

Query: 248 WRAATR 253
           W  +  
Sbjct: 461 WEKSAG 466

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485

 Score = 71.0 bits (175), Expect = 5e-14
 Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 29/186 (15%)

Query: 89  PDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTG 146
              PL   V RL  +K LD +   +  L E   ++A +G G     L++ F    A + G
Sbjct: 290 DKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG--DPVLQEGFLAAAAEYPG 347

Query: 147 ML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD-I 197
            +   +G  E  S +     DV ++PS  E  GL  L  +  G +P+  VR  GG+ D +
Sbjct: 348 QVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPL--VRRTGGLADTV 405

Query: 198 IPEDQDGKI-----GYLF---NPGDLDDCLSK-LEPLLYNQELRETMGQAARQEMEK-YD 247
                +        G++F   N   L   + +     L+++          RQ M   + 
Sbjct: 406 SDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV--LWSR--PSLWRFVQRQAMAMDFS 461

Query: 248 WRAATR 253
           W+ A +
Sbjct: 462 WQVAAK 467

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439

 Score = 67.6 bits (166), Expect = 6e-13
 Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 30/184 (16%)

Query: 89  PDKPLIVHVGRLGVE-KSLDFLKRVMDRL------PEARIAFIGDGPYREELEKMFTGMP 141
            +    + +GR     K +D L + ++ L       E R   IG G    ELE     + 
Sbjct: 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG--DPELEGWARSLE 306

Query: 142 AVFTGML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GG 193
                +         E   + Y S D  ++PS  E  GLV LEAM  G IP+    A GG
Sbjct: 307 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI--ASAVGG 364

Query: 194 IPDIIPEDQDGKIGYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWR 249
           + DII    +   G L    +PG+L + + K   L  +   +        ++    + W 
Sbjct: 365 LRDII---TNET-GILVKAGDPGELANAILKALELSRSDLSKFRE---NCKKRAMSFSWE 417

Query: 250 AATR 253
            +  
Sbjct: 418 KSAE 421

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 59.7 bits (144), Expect = 2e-10
 Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 65/270 (24%)

Query: 30  LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP 89
           +    D+  + S A+     AA V + + +     GVD                  +   
Sbjct: 175 VAPTLDVIALVSPAM-----AAEVVSRDNVFHVGHGVDHNLDQLG---------DPSPYA 220

Query: 90  DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGML 148
           +    V VG +  +   +F        P+     IG G  R            V   G +
Sbjct: 221 EGIHAVAVGSMLFD--PEFFVVASKAFPQVTFHVIGSGMGRHPGY-----GDNVIVYGEM 273

Query: 149 LGEELSQAYASGDVFVMPSESETLGLV-------VLEAMSSGIPVVGVRAGGIPDIIPED 201
              +           + P  SE + +        +L+    G+P V       P+ +   
Sbjct: 274 KHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAV------CPNAVVGP 327

Query: 202 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN 261
              + GY   PG+ D  ++ +   L    +R           +  +W   T         
Sbjct: 328 YKSRFGYT--PGNADSVIAAITQALEAPRVRY---------RQCLNWSDTTD-------- 368

Query: 262 AAIWFWRKKRAQLLRPIQWLAKRIFPSAEV 291
                      ++L P  +   R++P    
Sbjct: 369 -----------RVLDPRAYPETRLYPHPPT 387

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725

 Score = 49.4 bits (117), Expect = 6e-07
 Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 16/116 (13%)

Query: 148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIG 207
           +LG +  +      + V PS  E  G    E    G+P +     G    + +  +    
Sbjct: 507 ILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQA 566

Query: 208 --------------YLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR 249
                            +   L D + +   +   +  R     A     +  DW+
Sbjct: 567 KDYGIYIVDRRFKAPDESVEQLVDYMEEF--VKKTRRQRINQRNATEALSDLLDWK 620

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.97
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.97
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.97
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.97
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.95
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.95
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.95
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.94
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.94
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.93
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.93
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.92
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.92
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.9
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.86
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.75
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.73
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.61
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.6
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.59
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.51
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.48
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.43
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.41
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.39
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.38
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.34
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.3
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.3
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.27
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.05
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	98.97
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	98.96
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	98.9
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	98.79
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	98.74
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	98.7
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	98.68
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	98.57
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.29
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.22
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.2
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.08
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.03
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	97.77
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	97.73
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	97.63
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.2
3tov_A	349	Glycosyl transferase family 9; structural genomics	96.88
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	96.67
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	96.6
2nzw_A	371	Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H	91.1
1rcu_A	195	Conserved hypothetical protein VT76; structural ge	85.53
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	84.05
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	83.95
3jte_A	143	Response regulator receiver protein; structural ge	81.93
3nhm_A	133	Response regulator; protein structure initiative I	81.42
3hzh_A	157	Chemotaxis response regulator (CHEY-3); phosphatas	81.21
3kcn_A	151	Adenylate cyclase homolog; SGX, PSI 2, structural	80.68
3h5i_A	140	Response regulator/sensory box protein/ggdef domai	80.05

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=1.6e-36  Score=260.15  Aligned_cols=241  Identities=24%  Similarity=0.370  Sum_probs=209.7

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch-HHHHHhhcCCCCCceEEEeec
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-EMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      ...+.+.+.+++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+..... ....+.....++.++++|+|+
T Consensus       128 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~  206 (394)
T 3okp_A          128 PGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGS-HPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSR  206 (394)
T ss_dssp             HHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCS-SSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEESC
T ss_pred             chhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCC-CCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEEEEEec
Confidence            3456788999999999999999999999998764 57999999999999887733322 222222223445689999999


Q ss_pred             ccccccHHHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecCC----
Q 022615          100 LGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSES----  169 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~----  169 (294)
                      +.+.||++.++++++.+    ++++|+|+|.|++.+.+++++..  .+|.+.|+++++++.++|+.||++++||..    
T Consensus       207 ~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~  286 (394)
T 3okp_A          207 LVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGG  286 (394)
T ss_dssp             SCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGG
T ss_pred             cccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCcccccc
Confidence            99999999999999766    78999999999998888887743  379999999999999999999999999998    


Q ss_pred             ---CCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-h
Q 022615          170 ---ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-K  245 (294)
Q Consensus       170 ---e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-~  245 (294)
                         |++|++++|||++|+|||+++.++..+++   .++ +|++++++|+++++++|.++++|++.++++++++++.+. +
T Consensus       287 ~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i---~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~  362 (394)
T 3okp_A          287 LDVEGLGIVYLEAQACGVPVIAGTSGGAPETV---TPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAE  362 (394)
T ss_dssp             TBCCSSCHHHHHHHHTTCCEEECSSTTGGGGC---CTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCcHHHHHHHcCCCEEEeCCCChHHHH---hcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence               99999999999999999999999999999   778 999999999999999999999999999999999999985 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Q 022615          246 YDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       246 ~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                      |+|+.+++++. .+|+++....
T Consensus       363 ~s~~~~~~~~~-~~~~~~~r~~  383 (394)
T 3okp_A          363 WSWEIMGERLT-NILQSEPRKL  383 (394)
T ss_dssp             TBHHHHHHHHH-HHHHSCCC--
T ss_pred             CCHHHHHHHHH-HHHHHhccCc
Confidence            99999999999 7998876443

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=1.6e-36  Score=263.89  Aligned_cols=238  Identities=26%  Similarity=0.380  Sum_probs=205.1

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch--HHHHHhhcCCCCCceEEEeeccc
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      ..+++.+++.+|.++++|+..++.+.+.++.+.+++.++|||+|.+.+.+.....  ..+.+.. ..++.++++++|++.
T Consensus       175 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~~G~~~  253 (438)
T 3c48_A          175 RICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELG-IPLHTKVVAFVGRLQ  253 (438)
T ss_dssp             HHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTT-CCSSSEEEEEESCBS
T ss_pred             HHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcC-CCCCCcEEEEEeeec
Confidence            4567889999999999999999999987777778999999999998887653221  1233322 235678899999999


Q ss_pred             ccccHHHHHHHHHhC----C--CcEEEEEcC----CccHHHHHhhhcC----CCeEEEecccchhHHHHHhcCCEEEeec
Q 022615          102 VEKSLDFLKRVMDRL----P--EARIAFIGD----GPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~----~--~~~l~i~G~----~~~~~~~~~~~~~----~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      +.||++.+++++..+    |  +++|+|+|.    |+..+.+++++.+    .+|.+.|+++++++.++|+.||++++||
T Consensus       254 ~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps  333 (438)
T 3c48_A          254 PFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPS  333 (438)
T ss_dssp             GGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECC
T ss_pred             ccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECc
Confidence            999999999999765    3  799999998    7777777776653    4699999999999999999999999999


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCC
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s  247 (294)
                      ..|++|++++|||+||+|||+++.++..+++   .++.+|+++++.|+++++++|.++++|++.+.++++++++.+++|+
T Consensus       334 ~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s  410 (438)
T 3c48_A          334 FNESFGLVAMEAQASGTPVIAARVGGLPIAV---AEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFS  410 (438)
T ss_dssp             SCCSSCHHHHHHHHTTCCEEEESCTTHHHHS---CBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCchHHHHHHHcCCCEEecCCCChhHHh---hCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999   7888999999999999999999999999999999999999997799


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       248 ~~~~~~~~~~~l~~~~~~~  266 (294)
                      |+.+++++. .+|++++..
T Consensus       411 ~~~~~~~~~-~~~~~~~~~  428 (438)
T 3c48_A          411 WAATAAQLS-SLYNDAIAN  428 (438)
T ss_dssp             HHHHHHHHH-HHHHHHHHT
T ss_pred             HHHHHHHHH-HHHHHHhhh
Confidence            999999999 899998764

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=1.8e-35  Score=253.83  Aligned_cols=237  Identities=23%  Similarity=0.417  Sum_probs=204.7

Q ss_pred             cHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccc
Q 022615           22 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        22 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      .++.+++.+++.+|.++++|+.+++.+.+.++. .+++.++|||+|.+.+.+.. ....+.+.. ..++.++++|+|++.
T Consensus       145 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~-~~~~~~~~~-~~~~~~~i~~~G~~~  221 (394)
T 2jjm_A          145 SLNNLIRFGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD-MTQLKKEYG-ISESEKILIHISNFR  221 (394)
T ss_dssp             TTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC-CHHHHHHTT-CC---CEEEEECCCC
T ss_pred             HHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc-hHHHHHHcC-CCCCCeEEEEeeccc
Confidence            345788899999999999999999999988765 57999999999998887653 223333322 225678999999999


Q ss_pred             ccccHHHHHHHHHhC---CCcEEEEEcCCccHHHHHhhhcCC----CeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          102 VEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~---~~~~l~i~G~~~~~~~~~~~~~~~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      +.||++.+++++..+   ++++|+|+|.|+..+.+++++++.    +|.+.|+  .+++.++|+.||++++||..|++|+
T Consensus       222 ~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~  299 (394)
T 2jjm_A          222 KVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGL  299 (394)
T ss_dssp             GGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCH
T ss_pred             cccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCch
Confidence            999999999999876   468999999999888888887754    5899996  4899999999999999999999999


Q ss_pred             HHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR  253 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~  253 (294)
                      +++|||+||+|||+++.++..+++   .++.+|+++++.|+++++++|..+++|++.++++++++++.+ ++|+|+.+++
T Consensus       300 ~~~EAma~G~PvI~~~~~~~~e~v---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  376 (394)
T 2jjm_A          300 VLLEAMACGVPCIGTRVGGIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVS  376 (394)
T ss_dssp             HHHHHHHTTCCEEEECCTTSTTTC---CBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHHHhcCCCEEEecCCChHHHh---hcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            999999999999999999999999   788999999999999999999999999999999999999998 7799999999


Q ss_pred             HHHHHHHHHHHHHH
Q 022615          254 TIRNEQYNAAIWFW  267 (294)
Q Consensus       254 ~~~~~l~~~~~~~~  267 (294)
                      ++. .+|++++...
T Consensus       377 ~~~-~~~~~~~~~~  389 (394)
T 2jjm_A          377 QYE-TIYYDVLRDD  389 (394)
T ss_dssp             HHH-HHHHHTC---
T ss_pred             HHH-HHHHHHHhhh
Confidence            999 8999987654

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=4.9e-36  Score=260.61  Aligned_cols=234  Identities=22%  Similarity=0.283  Sum_probs=204.1

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCc-------cchHHHHHhhcCCCCCceEEEe
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF-------RSSEMRWRLSNGEPDKPLIVHV   97 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~   97 (294)
                      .+++.+++.+|.++++|+.+++.....++.+..++.+||||+|.+.+.+..       .....+.+.+. .++ ++|+|+
T Consensus       180 ~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~  257 (439)
T 3fro_A          180 DPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFI  257 (439)
T ss_dssp             CHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEE
T ss_pred             eHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEE
Confidence            688999999999999999999987666666778999999999999887652       11222233322 334 899999


Q ss_pred             eccc-ccccHHHHHHHHHhC------CCcEEEEEcCCccH--HHHHhhhcCC--CeEEEecccchhHHHHHhcCCEEEee
Q 022615           98 GRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYR--EELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        98 G~~~-~~k~~~~l~~~~~~~------~~~~l~i~G~~~~~--~~~~~~~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      |++. +.||++.++++++.+      ++++|+|+|.|+..  +.++++....  .+.+.|+++.+++.++|+.||++++|
T Consensus       258 G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~p  337 (439)
T 3fro_A          258 GRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIP  337 (439)
T ss_dssp             CCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEEC
T ss_pred             cccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeC
Confidence            9999 999999999999877      78999999999866  7777776543  36788999999999999999999999


Q ss_pred             cCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHh
Q 022615          167 SESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEK  245 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~  245 (294)
                      |..|++|++++|||+||+|||+++.++..+++   .++ +|++++++|+++++++|.++++ +++.++++++++++.+++
T Consensus       338 s~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~---~~~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~  413 (439)
T 3fro_A          338 SYFEPFGLVALEAMCLGAIPIASAVGGLRDII---TNE-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS  413 (439)
T ss_dssp             BSCCSSCHHHHHHHHTTCEEEEESSTHHHHHC---CTT-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT
T ss_pred             CCCCCccHHHHHHHHCCCCeEEcCCCCcceeE---EcC-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999   666 9999999999999999999999 999999999999999988


Q ss_pred             CCHHHHHHHHHHHHHHHHHH
Q 022615          246 YDWRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       246 ~s~~~~~~~~~~~l~~~~~~  265 (294)
                      |+|+.+++++. .+|+++++
T Consensus       414 ~s~~~~~~~~~-~~~~~~~~  432 (439)
T 3fro_A          414 FSWEKSAERYV-KAYTGSID  432 (439)
T ss_dssp             SCHHHHHHHHH-HHHHTCSC
T ss_pred             CcHHHHHHHHH-HHHHHHHH
Confidence            99999999999 89988753

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=3.9e-35  Score=259.27  Aligned_cols=242  Identities=21%  Similarity=0.279  Sum_probs=205.1

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh--cc-C----CcCceEEeeccccCCCCCCCccc---hHHHHHhhc----CCCC
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA--RV-T----AANKIRIWKKGVDSESFHPRFRS---SEMRWRLSN----GEPD   90 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~--~~-~----~~~~i~~i~~gvd~~~~~~~~~~---~~~~~~~~~----~~~~   90 (294)
                      .+++.+++.+|.++++|+.+++.+.+.  ++ .    +.+++.+||||+|.+.+.+....   ...+.+.+.    ..++
T Consensus       182 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  261 (499)
T 2r60_A          182 IAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERME  261 (499)
T ss_dssp             HHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTT
T ss_pred             HHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCC
Confidence            467889999999999999999999887  66 5    67899999999999988765331   223333220    2346


Q ss_pred             CceEEEeecccccccHHHHHHHHHhCC-----CcEEEEEcC--Cc------c-------HHHHHhhhcC----CCeEEEe
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRLP-----EARIAFIGD--GP------Y-------REELEKMFTG----MPAVFTG  146 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~~-----~~~l~i~G~--~~------~-------~~~~~~~~~~----~~v~~~g  146 (294)
                      .++|+|+|++.+.||++.+++++..+.     .++++|+|.  |+      .       .+.+++++++    .+|.++|
T Consensus       262 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G  341 (499)
T 2r60_A          262 LPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP  341 (499)
T ss_dssp             SCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE
T ss_pred             CcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC
Confidence            778999999999999999999999883     258999998  33      1       5666666653    3699999


Q ss_pred             cccchhHHHHHhcC----CEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHH
Q 022615          147 MLLGEELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL  222 (294)
Q Consensus       147 ~~~~~~~~~~~~~a----d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i  222 (294)
                      +++++++..+|+.|    |++++||..|++|++++|||+||+|||+++.++..|++   .++.+|+++++.|+++++++|
T Consensus       342 ~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v---~~~~~g~l~~~~d~~~la~~i  418 (499)
T 2r60_A          342 LNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKYGVLVDPEDPEDIARGL  418 (499)
T ss_dssp             CCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHT---GGGTSSEEECTTCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHh---cCCceEEEeCCCCHHHHHHHH
Confidence            99999999999999    99999999999999999999999999999999999999   778899999999999999999


Q ss_pred             HHHhhChHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHh
Q 022615          223 EPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYNAAIWFWRKK  270 (294)
Q Consensus       223 ~~ll~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~l~~~~~~~~~~~  270 (294)
                      ..+++|++.+.++++++++.+.+ |+|+.+++++. .+|++++...+..
T Consensus       419 ~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~y~~~~~~~~~~  466 (499)
T 2r60_A          419 LKAFESEETWSAYQEKGKQRVEERYTWQETARGYL-EVIQEIADRKDEE  466 (499)
T ss_dssp             HHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHH-HHHHHHHHC----
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhhhhh
Confidence            99999999999999999999865 99999999999 8999998765444

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=1.2e-35  Score=256.52  Aligned_cols=228  Identities=19%  Similarity=0.251  Sum_probs=195.0

Q ss_pred             HHHHHHhCC--eEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCC--CCceEEEeecccc
Q 022615           27 IKFLHRAAD--LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP--DKPLIVHVGRLGV  102 (294)
Q Consensus        27 ~~~~~~~ad--~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~G~~~~  102 (294)
                      .+++++++|  .++++|+.+++.+.+ ++. +.++.++|||+|.+.+.      ..+.+.. ..+  +.++|+++|++.+
T Consensus       125 ~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~~------~~~~~~~-~~~~~~~~~il~vGr~~~  195 (413)
T 3oy2_A          125 LWWIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTIY------DARKLVG-LSEYNDDVLFLNMNRNTA  195 (413)
T ss_dssp             GGGGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCCT------THHHHTT-CGGGTTSEEEECCSCSSG
T ss_pred             HHHHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHHH------HHHHhcC-CCcccCceEEEEcCCCch
Confidence            477888988  999999999999999 444 57999999999998771      1122222 122  5789999999999


Q ss_pred             cccHHHHHHHHHhC----CCcEEEEEcCCccH------HHHHhhhcCC----C-------eEEEecccchhHHHHHhcCC
Q 022615          103 EKSLDFLKRVMDRL----PEARIAFIGDGPYR------EELEKMFTGM----P-------AVFTGMLLGEELSQAYASGD  161 (294)
Q Consensus       103 ~k~~~~l~~~~~~~----~~~~l~i~G~~~~~------~~~~~~~~~~----~-------v~~~g~~~~~~~~~~~~~ad  161 (294)
                      .||++.+++++..+    ++++|+|+|.|+..      +.+++++++.    +       +.+.|+++++++.++|+.||
T Consensus       196 ~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~ad  275 (413)
T 3oy2_A          196 RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACD  275 (413)
T ss_dssp             GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCS
T ss_pred             hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCC
Confidence            99999999998876    89999999988654      6666654432    2       77889999999999999999


Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcc---------------ee--ecCCCCHHHHHHHHHH
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI---------------GY--LFNPGDLDDCLSKLEP  224 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~---------------g~--~~~~~d~~~l~~~i~~  224 (294)
                      ++++||..|++|++++|||+||+|||+++.++..|++   .++.+               |+  ++++.|+++++++| +
T Consensus       276 v~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v---~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~  351 (413)
T 3oy2_A          276 VIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYF---SGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-T  351 (413)
T ss_dssp             EEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHS---CTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-H
T ss_pred             EEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHH---ccCcccccccccccccccccCcceeeCCCCHHHHHHHH-H
Confidence            9999999999999999999999999999999999999   66666               88  99999999999999 9


Q ss_pred             HhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHH
Q 022615          225 LLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWR  268 (294)
Q Consensus       225 ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~~~~~~~  268 (294)
                      +++|++.++++++++++.+ ++|+|+.+++++. .+|++++++..
T Consensus       352 l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~~~~~~~~~~  395 (413)
T 3oy2_A          352 FFKDEKNRKEYGKRVQDFVKTKPTWDDISSDII-DFFNSLLRVES  395 (413)
T ss_dssp             HTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHH-HHHHHHTC---
T ss_pred             HhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhcC
Confidence            9999999999999999998 5799999999999 89999986543

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=3.8e-35  Score=258.51  Aligned_cols=236  Identities=19%  Similarity=0.247  Sum_probs=199.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-cc--------CCcCceEEeeccccCCCCCCCcc------------------c
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAANKIRIWKKGVDSESFHPRFR------------------S   77 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~--------~~~~~i~~i~~gvd~~~~~~~~~------------------~   77 (294)
                      .+++.+++.+|.++++|+..++.+.+. ++        .+..++.+||||+|.+.|.+...                  .
T Consensus       198 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (485)
T 1rzu_A          198 SFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNK  277 (485)
T ss_dssp             EHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHH
T ss_pred             cHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhH
Confidence            477889999999999999999998764 33        35679999999999988876532                  1


Q ss_pred             hHHHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcC--CCeE-EEecccc
Q 022615           78 SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG--MPAV-FTGMLLG  150 (294)
Q Consensus        78 ~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~--~~v~-~~g~~~~  150 (294)
                      ...+.+.+...++.++|+|+|++.+.||++.+++++..+  ++++|+|+|.|+  +.+.+++++..  .+|. +.|+ +.
T Consensus       278 ~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~  356 (485)
T 1rzu_A          278 KAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NE  356 (485)
T ss_dssp             HHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CH
T ss_pred             HHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CH
Confidence            233333433332366999999999999999999999877  689999999986  45667766654  4687 6787 77


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC---------cceeecCCCCHHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSK  221 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~---------~~g~~~~~~d~~~l~~~  221 (294)
                      +++..+|+.||++++||..|++|++++|||+||+|||+++.++..|++   .++         .+|+++++.|+++++++
T Consensus       357 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~~la~~  433 (485)
T 1rzu_A          357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTV---IDANHAALASKAATGVQFSPVTLDGLKQA  433 (485)
T ss_dssp             HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHH
T ss_pred             HHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhhee---cccccccccccCCcceEeCCCCHHHHHHH
Confidence            788999999999999999999999999999999999999999999999   777         89999999999999999


Q ss_pred             HHHHh---hChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Q 022615          222 LEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       222 i~~ll---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                      |..++   +|++.++++++++++  ++|+|+.+++++. .+|++++...
T Consensus       434 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~~y~~~~~~~  479 (485)
T 1rzu_A          434 IRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA-ALYSQLISKG  479 (485)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH-HHHHHHTC--
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHH-HHHHHhhCCC
Confidence            99999   799999999988865  6799999999999 8999987554

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=2.4e-34  Score=253.35  Aligned_cols=237  Identities=19%  Similarity=0.264  Sum_probs=197.3

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-ccC--------Cc--CceEEeeccccCCCCCCCcc-----------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-RVT--------AA--NKIRIWKKGVDSESFHPRFR-----------------   76 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-~~~--------~~--~~i~~i~~gvd~~~~~~~~~-----------------   76 (294)
                      .+++.+++.+|.++++|+.+++.+.+. ++.        +.  .++.+||||+|.+.+.+...                 
T Consensus       196 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (485)
T 2qzs_A          196 SFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAE  275 (485)
T ss_dssp             EHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHH
T ss_pred             cHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHH
Confidence            578889999999999999999998764 332        22  68999999999998876532                 


Q ss_pred             -chHHHHHhhcCC-CCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCc--cHHHHHhhhcC--CCeE-EEec
Q 022615           77 -SSEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG--MPAV-FTGM  147 (294)
Q Consensus        77 -~~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~--~~~~~~~~~~~--~~v~-~~g~  147 (294)
                       ....+.+..... ++.++|+++|++.+.||++.+++++..+  ++++|+|+|.|+  ..+.+++++.+  .+|. +.|+
T Consensus       276 ~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~  355 (485)
T 2qzs_A          276 NKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY  355 (485)
T ss_dssp             HHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC
T ss_pred             hHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC
Confidence             123333333222 2668999999999999999999999887  589999999885  45677776654  4686 7787


Q ss_pred             ccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC---------cceeecCCCCHHHH
Q 022615          148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDC  218 (294)
Q Consensus       148 ~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~---------~~g~~~~~~d~~~l  218 (294)
                       +.+++..+|+.||++++||..|++|++++|||+||+|||+++.++..|++   .++         .+|++++++|++++
T Consensus       356 -~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~~l  431 (485)
T 2qzs_A          356 -HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTV---SDCSLENLADGVASGFVFEDSNAWSL  431 (485)
T ss_dssp             -CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEECSSSHHHH
T ss_pred             -CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCcccee---ccCccccccccccceEEECCCCHHHH
Confidence             77788999999999999999999999999999999999999999999999   777         89999999999999


Q ss_pred             HHHHHHHh---hChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Q 022615          219 LSKLEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR  268 (294)
Q Consensus       219 ~~~i~~ll---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~  268 (294)
                      +++|.+++   .|++.+.++++++++  ++|+|+.+++++. .+|+++.....
T Consensus       432 a~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~ly~~~~~~~~  481 (485)
T 2qzs_A          432 LRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYR-ELYYRLKLEHH  481 (485)
T ss_dssp             HHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHH-HHHHHHC----
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHH-HHHHHhhhhhc
Confidence            99999999   799999999988864  6799999999999 89998865543

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=7.2e-35  Score=250.91  Aligned_cols=225  Identities=23%  Similarity=0.308  Sum_probs=198.5

Q ss_pred             HHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc-cccccH
Q 022615           28 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSL  106 (294)
Q Consensus        28 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-~~~k~~  106 (294)
                      +.+++.+|.++++|+..++.+.+.++  ..++ ++|||+|.+.+.+.....       ...++.++++|+|++ .+.||+
T Consensus       155 ~~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~~-------~~~~~~~~i~~~G~~~~~~Kg~  224 (406)
T 2gek_A          155 RPYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLLD-------GYPREGRTVLFLGRYDEPRKGM  224 (406)
T ss_dssp             HHHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCCT-------TCSCSSCEEEEESCTTSGGGCH
T ss_pred             HHHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchhh-------hccCCCeEEEEEeeeCccccCH
Confidence            37889999999999999999988664  3578 999999987665543211       012245799999999 999999


Q ss_pred             HHHHHHHHhC----CCcEEEEEcCCccHHHHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecC-CCCcchHHHHH
Q 022615          107 DFLKRVMDRL----PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEA  179 (294)
Q Consensus       107 ~~l~~~~~~~----~~~~l~i~G~~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-~e~~~~~~~Ea  179 (294)
                      +.+++++..+    ++++|+|+|.++. +.+++++++  .+|.+.|+++++++.++|+.||++|+||. .|++|++++||
T Consensus       225 ~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea  303 (406)
T 2gek_A          225 AVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEA  303 (406)
T ss_dssp             HHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHH
Confidence            9999999876    7899999999988 777777664  47999999999999999999999999986 99999999999


Q ss_pred             HhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 022615          180 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQ  259 (294)
Q Consensus       180 ~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l  259 (294)
                      |+||+|||+++.++..+++   .++.+|+++++.|+++++++|.+++++++.+.++++++++.+++|+|+.+++++. .+
T Consensus       304 ~a~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~  379 (406)
T 2gek_A          304 MAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIM-RV  379 (406)
T ss_dssp             HHHTCEEEECCCHHHHHHH---TTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHH-HH
T ss_pred             HHcCCCEEEecCCcHHHHh---cCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HH
Confidence            9999999999999999999   7889999999999999999999999999999999999999988999999999999 89


Q ss_pred             HHHHHHHH
Q 022615          260 YNAAIWFW  267 (294)
Q Consensus       260 ~~~~~~~~  267 (294)
                      |+++++..
T Consensus       380 ~~~~~~~~  387 (406)
T 2gek_A          380 YETVSGAG  387 (406)
T ss_dssp             HHHHCCTT
T ss_pred             HHHHHhhc
Confidence            99987543

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=1e-33  Score=241.13  Aligned_cols=231  Identities=17%  Similarity=0.210  Sum_probs=196.3

Q ss_pred             HHHHHHHH--hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccc---hHHHHHhhcCCCCCceEEEeec
Q 022615           25 LVIKFLHR--AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        25 ~~~~~~~~--~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      .+++.++.  .+|.++++|+..++.+.+.++.+..++.++|||+|.+.+.+....   ...+.+.. ..++.++++|+|+
T Consensus       126 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~  204 (374)
T 2iw1_A          126 AFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGS  204 (374)
T ss_dssp             HHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTT-CCTTCEEEEEECS
T ss_pred             HHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhC-CCCCCeEEEEecc
Confidence            45555554  699999999999999999888878899999999999877654321   12222222 2356789999999


Q ss_pred             ccccccHHHHHHHHHhC-----CCcEEEEEcCCccHHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCC
Q 022615          100 LGVEKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESE  170 (294)
Q Consensus       100 ~~~~k~~~~l~~~~~~~-----~~~~l~i~G~~~~~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e  170 (294)
                      +.+.||++.+++++..+     ++++|+++|.|+. +.++++++    ..+|.++|+.  +++.++|+.||++++||..|
T Consensus       205 ~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e  281 (374)
T 2iw1_A          205 DFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQE  281 (374)
T ss_dssp             CTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCC
T ss_pred             chhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEeccccC
Confidence            99999999999999887     3689999999874 45555544    2479999974  89999999999999999999


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecC-CCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHH
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR  249 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~-~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~  249 (294)
                      ++|++++|||+||+|||+++.++..+++   .++.+|++++ +.|+++++++|.++++|++.++++++++++.+++++|+
T Consensus       282 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i---~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~  358 (374)
T 2iw1_A          282 AAGIVLLEAITAGLPVLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLY  358 (374)
T ss_dssp             SSCHHHHHHHHHTCCEEEETTSTTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCS
T ss_pred             CcccHHHHHHHCCCCEEEecCCCchhhh---ccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHH
Confidence            9999999999999999999999999999   7788999997 88999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 022615          250 AATRTIRNEQYNAA  263 (294)
Q Consensus       250 ~~~~~~~~~l~~~~  263 (294)
                      ..++++. .+++..
T Consensus       359 ~~~~~~~-~~l~~~  371 (374)
T 2iw1_A          359 SLPEKAA-DIITGG  371 (374)
T ss_dssp             CHHHHHH-HHHHCC
T ss_pred             HHHHHHH-HHHHHh
Confidence            9999998 666654

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=2.8e-33  Score=255.43  Aligned_cols=233  Identities=20%  Similarity=0.294  Sum_probs=192.5

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHh---cc------------------CCcCceEEeeccccCCCCCCCccchH------
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAA---RV------------------TAANKIRIWKKGVDSESFHPRFRSSE------   79 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~---~~------------------~~~~~i~~i~~gvd~~~~~~~~~~~~------   79 (294)
                      ++.+++.||.||++|+..++.+...   +.                  ....++.+||||+|.+.|.|......      
T Consensus       468 E~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~  547 (816)
T 3s28_A          468 DIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFH  547 (816)
T ss_dssp             HHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGH
T ss_pred             HHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhcc
Confidence            6679999999999999988742211   11                  11238999999999999877543221      


Q ss_pred             ------------HHHHhh-cCCCCCceEEEeecccccccHHHHHHHHHhC----CCcEEEEEcCCc-----------cHH
Q 022615           80 ------------MRWRLS-NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGP-----------YRE  131 (294)
Q Consensus        80 ------------~~~~~~-~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~-----------~~~  131 (294)
                                  .+...+ ...++.++|+|+|++.+.||++.+++++..+    ++++|+|+|.|+           ..+
T Consensus       548 ~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~  627 (816)
T 3s28_A          548 SEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMK  627 (816)
T ss_dssp             HHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHH
T ss_pred             ccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHH
Confidence                        000000 1145678999999999999999999999888    469999999988           455


Q ss_pred             HHHhhhcC----CCeEEEec----ccchhHHHHHh-cCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCC
Q 022615          132 ELEKMFTG----MPAVFTGM----LLGEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ  202 (294)
Q Consensus       132 ~~~~~~~~----~~v~~~g~----~~~~~~~~~~~-~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~  202 (294)
                      .+.+++++    .+|.++|+    ++.+++..+|+ .+|++++||..|+||++++|||+||+|||+|+.++..+++   .
T Consensus       628 ~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV---~  704 (816)
T 3s28_A          628 KMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII---V  704 (816)
T ss_dssp             HHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHC---C
T ss_pred             HHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHH---c
Confidence            66666554    36999994    45589999998 6799999999999999999999999999999999999999   8


Q ss_pred             CCcceeecCCCCHHHHHHHHHHHh----hChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 022615          203 DGKIGYLFNPGDLDDCLSKLEPLL----YNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       203 ~~~~g~~~~~~d~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~l~~~~  263 (294)
                      ++.+|+++++.|+++++++|.+++    .|++.++++++++++.+ ++|||+.+++++. .+|+..
T Consensus       705 dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll-~lY~~~  769 (816)
T 3s28_A          705 HGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLL-TLTGVY  769 (816)
T ss_dssp             BTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHH-HHHHHH
T ss_pred             cCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHH
Confidence            899999999999999999997776    89999999999999999 6799999999999 799876

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=2.1e-32  Score=236.39  Aligned_cols=228  Identities=22%  Similarity=0.297  Sum_probs=184.3

Q ss_pred             HHHHHHHHHhCCeEE-ecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch----HHHHHhhcCCCCCceEEEee
Q 022615           24 WLVIKFLHRAADLTL-VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----EMRWRLSNGEPDKPLIVHVG   98 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii-~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~G   98 (294)
                      +.+.+.++.++|.++ ++|+..++.      .+..++.+||||+|...+.+.....    ..+.+. ...++.++++++|
T Consensus       166 ~~~~~~~~~~~~~~i~~~s~~~~~~------~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~-~~~~~~~~i~~vG  238 (416)
T 2x6q_A          166 WEFLRRFVEKYDRYIFHLPEYVQPE------LDRNKAVIMPPSIDPLSEKNVELKQTEILRILERF-DVDPEKPIITQVS  238 (416)
T ss_dssp             HHHHHHHHTTSSEEEESSGGGSCTT------SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHT-TCCTTSCEEEEEC
T ss_pred             HHHHHHHHHhCCEEEEechHHHHhh------CCccceEEeCCCCChhhhcccccChhhHHHHHHHh-CCCCCCcEEEEEe
Confidence            344556677888776 566665542      2346899999999987665432111    222222 2245678999999


Q ss_pred             cccccccHHHHHHHHHhC----CCcEEEEEcCCcc-----HHHHHhhhc----CCCeEEEeccc---chhHHHHHhcCCE
Q 022615           99 RLGVEKSLDFLKRVMDRL----PEARIAFIGDGPY-----REELEKMFT----GMPAVFTGMLL---GEELSQAYASGDV  162 (294)
Q Consensus        99 ~~~~~k~~~~l~~~~~~~----~~~~l~i~G~~~~-----~~~~~~~~~----~~~v~~~g~~~---~~~~~~~~~~ad~  162 (294)
                      ++.+.||++.+++++..+    |+++|+|+|.|+.     .+.++++.+    ..+|.++|+++   ++++.++|+.||+
T Consensus       239 rl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~  318 (416)
T 2x6q_A          239 RFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDV  318 (416)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSE
T ss_pred             ccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCE
Confidence            999999999999998765    7899999999864     233444332    35799999775   5799999999999


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE  242 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  242 (294)
                      +++||..|++|++++|||+||+|||+++.++..+++   .++.+|++++  |+++++++|..+++|++.++++++++++.
T Consensus       319 ~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i---~~~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~  393 (416)
T 2x6q_A          319 ILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQI---VDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKER  393 (416)
T ss_dssp             EEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHC---CBTTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCccHHHHHHHcCCCEEEccCCCChhhe---ecCCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999   7889999998  99999999999999999999999999999


Q ss_pred             HH-hCCHHHHHHHHHHHHHHHHH
Q 022615          243 ME-KYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       243 ~~-~~s~~~~~~~~~~~l~~~~~  264 (294)
                      +. +|+|+.+++++. .+|++++
T Consensus       394 ~~~~fs~~~~~~~~~-~~~~~l~  415 (416)
T 2x6q_A          394 VRKNFIITKHMERYL-DILNSLG  415 (416)
T ss_dssp             HHHHTBHHHHHHHHH-HHHHTC-
T ss_pred             HHHHcCHHHHHHHHH-HHHHHhh
Confidence            85 799999999999 7888764

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=6.9e-33  Score=245.03  Aligned_cols=234  Identities=21%  Similarity=0.287  Sum_probs=188.8

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhcc--------CCcCceEEeeccccCCCCCCCccc-------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARV--------TAANKIRIWKKGVDSESFHPRFRS-------------------   77 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--------~~~~~i~~i~~gvd~~~~~~~~~~-------------------   77 (294)
                      .+++..+..||.|+++|+..++.+.+.++        ....++.+|+||+|.+.|+|....                   
T Consensus       233 n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k  312 (536)
T 3vue_A          233 NWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK  312 (536)
T ss_dssp             EHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred             hHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence            36788999999999999999999877543        234689999999999999874321                   


Q ss_pred             hHHHHHhhc-CCCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCccH--HHHHhhhc--CCCeEEEecccc
Q 022615           78 SEMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYR--EELEKMFT--GMPAVFTGMLLG  150 (294)
Q Consensus        78 ~~~~~~~~~-~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~~--~~~~~~~~--~~~v~~~g~~~~  150 (294)
                      .......+. ..++.++|+++||+.+.||++.+++++..+  ++.+++++|.|...  ..++....  ..++.+.+..+.
T Consensus       313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~  392 (536)
T 3vue_A          313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA  392 (536)
T ss_dssp             HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred             HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence            011111222 235678999999999999999999999887  46899999987533  23333332  346999999999


Q ss_pred             hhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCccee----------ecCCCCHHHHHH
Q 022615          151 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY----------LFNPGDLDDCLS  220 (294)
Q Consensus       151 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~----------~~~~~d~~~l~~  220 (294)
                      +++..+|+.||++++||..|+||++++|||+||+|||+++.++..|++   .++.+|+          ++++.|++++++
T Consensus       393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V---~dg~~G~~~~~~~~~g~l~~~~d~~~la~  469 (536)
T 3vue_A          393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTV---IEGKTGFHMGRLSVDCKVVEPSDVKKVAA  469 (536)
T ss_dssp             HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHC---CBTTTEEECCCCCSCTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchhee---eCCCCccccccCCCceeEECCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999   8888887          677778999999


Q ss_pred             HHHHHhh--ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 022615          221 KLEPLLY--NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       221 ~i~~ll~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~  264 (294)
                      +|.+++.  +++.++++.+++.+  ++|||++.++++. ++|+++.
T Consensus       470 ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~~y~-~ly~~L~  512 (536)
T 3vue_A          470 TLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAKNWE-NVLLGLG  512 (536)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHHHHH-HHHHTTC
T ss_pred             HHHHHHHhcCcHHHHHHHHHHHH--hcCCHHHHHHHHH-HHHHHhh
Confidence            9998775  55556777665533  4699999999998 8999873

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=2.7e-33  Score=235.93  Aligned_cols=203  Identities=19%  Similarity=0.179  Sum_probs=181.0

Q ss_pred             CCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHHHHHH
Q 022615           34 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM  113 (294)
Q Consensus        34 ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~  113 (294)
                      +|.++++|+.+++.+.+     ..++.++|||+|.+.+.+...          ..++..+++|+|++.+.||++.+++++
T Consensus       120 ~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~i~~vG~~~~~Kg~~~li~a~  184 (342)
T 2iuy_A          120 PVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAAD----------QVAKEDFLLFMGRVSPHKGALEAAAFA  184 (342)
T ss_dssp             CTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTT----------CCCCCSCEEEESCCCGGGTHHHHHHHH
T ss_pred             ceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCcccc----------cCCCCCEEEEEeccccccCHHHHHHHH
Confidence            99999999999998876     468999999999887766432          123556899999999999999999999


Q ss_pred             HhCCCcEEEEEcCCccHHHHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecC----------CCCcchHHHHHHh
Q 022615          114 DRLPEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE----------SETLGLVVLEAMS  181 (294)
Q Consensus       114 ~~~~~~~l~i~G~~~~~~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~----------~e~~~~~~~Ea~a  181 (294)
                      +.+ +++|+|+|.|+..+.++++.+.  .+|.+.|+++++++.++|+.||++++||.          .|++|++++|||+
T Consensus       185 ~~~-~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma  263 (342)
T 2iuy_A          185 HAC-GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAV  263 (342)
T ss_dssp             HHH-TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHH
T ss_pred             Hhc-CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHh
Confidence            988 8999999999888777776553  58999999999999999999999999999          8999999999999


Q ss_pred             cCCCEEeecCCCcccccccCCC--CcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH-HhCCHHHHHHHHHHH
Q 022615          182 SGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNE  258 (294)
Q Consensus       182 ~G~pvI~~~~~~~~e~~~~~~~--~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~  258 (294)
                      ||+|||+++.++..|++   .+  +.+|+++++ |.++++++|.++++        ++++++.+ ++|+|+.+++++. .
T Consensus       264 ~G~PvI~s~~~~~~e~~---~~~~~~~g~~~~~-d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~-~  330 (342)
T 2iuy_A          264 SGTPVVGTGNGCLAEIV---PSVGEVVGYGTDF-APDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYV-E  330 (342)
T ss_dssp             TTCCEEECCTTTHHHHG---GGGEEECCSSSCC-CHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHH-H
T ss_pred             cCCCEEEcCCCChHHHh---cccCCCceEEcCC-CHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHH-H
Confidence            99999999999999999   77  889999999 99999999999986        56777777 6799999999999 8


Q ss_pred             HHHHHHH
Q 022615          259 QYNAAIW  265 (294)
Q Consensus       259 l~~~~~~  265 (294)
                      +|+++++
T Consensus       331 ~~~~~~~  337 (342)
T 2iuy_A          331 QYRRLLA  337 (342)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9998864

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=99.97  E-value=2e-31  Score=229.18  Aligned_cols=218  Identities=9%  Similarity=0.035  Sum_probs=168.6

Q ss_pred             HHHHHHHHHhCC--eEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc-
Q 022615           24 WLVIKFLHRAAD--LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-  100 (294)
Q Consensus        24 ~~~~~~~~~~ad--~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~-  100 (294)
                      +.+.+.+++.++  .++++|+++++.+.+.+ .+..++.++|||+|.+.+.+..          ...++...++++|++ 
T Consensus       183 ~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g-~~~~~~~~i~~g~d~~~~~~~~----------~~~~~~~~il~~gr~~  251 (413)
T 2x0d_A          183 YVLAESTYKYRGPQIAVFNSELLKQYFNNKG-YNFTDEYFFQPKINTTLKNYIN----------DKRQKEKIILVYGRPS  251 (413)
T ss_dssp             HHHHHHTTSCCSCEEEEEESHHHHHHHHHHT-CCCSEEEEECCCCCHHHHTTTT----------SCCCCCSEEEEEECTT
T ss_pred             HHHHHHHhccCCceEEEEcCHHHHHHHHHcC-CCCCceEEeCCCcCchhhcccc----------cccCCCCEEEEEecCc
Confidence            345667777766  58899999999998863 3445789999999876443210          022355678899996 


Q ss_pred             cccccHHHHHHHHHhC----CC---cEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcc
Q 022615          101 GVEKSLDFLKRVMDRL----PE---ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG  173 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~----~~---~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~  173 (294)
                      .+.||++.+++|+..+    |+   ++|+++|+|+...   ++....+|+++|+++.+++.++|+.||++++||..|++|
T Consensus       252 ~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~---~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g  328 (413)
T 2x0d_A          252 VKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI---ALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPS  328 (413)
T ss_dssp             CGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE---EEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCC
T ss_pred             hhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh---hcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCC
Confidence            6889999999998765    54   8999999886542   222234799999999999999999999999999999999


Q ss_pred             hHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHH
Q 022615          174 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  253 (294)
Q Consensus       174 ~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~  253 (294)
                      ++++||||||+|||+++ ++..|++   .++.+|+++++.|+++++++|..+++|++.+++   ++++.+++|+|+...+
T Consensus       329 ~~~lEAmA~G~PVV~~~-~g~~e~v---~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~---~~~~~~~~~~W~~~~~  401 (413)
T 2x0d_A          329 YPPLEMAHFGLRVITNK-YENKDLS---NWHSNIVSLEQLNPENIAETLVELCMSFNNRDV---DKKESSNMMFYINEFN  401 (413)
T ss_dssp             SHHHHHHHTTCEEEEEC-BTTBCGG---GTBTTEEEESSCSHHHHHHHHHHHHHHTC----------CCBSCGGGCCCC-
T ss_pred             cHHHHHHhCCCcEEEeC-CCcchhh---hcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH---hHHHHHHhCCHHHHHH
Confidence            99999999999999965 4567999   788899999999999999999999998887665   5555567899999988


Q ss_pred             HHHHHHHHHHH
Q 022615          254 TIRNEQYNAAI  264 (294)
Q Consensus       254 ~~~~~l~~~~~  264 (294)
                      ++  ++|++++
T Consensus       402 ~~--~~~~~l~  410 (413)
T 2x0d_A          402 EF--SFIKEIE  410 (413)
T ss_dssp             ----TTHHHHH
T ss_pred             HH--HHHHHHH
Confidence            83  5777764

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.97  E-value=8.2e-30  Score=198.36  Aligned_cols=180  Identities=23%  Similarity=0.347  Sum_probs=154.2

Q ss_pred             eeccccCCCCC--CCcc-----chHHHHHhhcCCCCCceEEEeeccc-ccccHHHHHHHHHhC------CCcEEEEEcCC
Q 022615           62 WKKGVDSESFH--PRFR-----SSEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDG  127 (294)
Q Consensus        62 i~~gvd~~~~~--~~~~-----~~~~~~~~~~~~~~~~~i~~~G~~~-~~k~~~~l~~~~~~~------~~~~l~i~G~~  127 (294)
                      ||||+|.+.|.  +...     ....+.+.  ..++..+|+|+|++. +.||++.+++++..+      ++++|+|+|.+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~--~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~   79 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHT--TCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHc--CCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence            69999999998  6542     23333333  334556999999999 999999999999776      47999999998


Q ss_pred             c--cHHHHHhhhcCC-CeEE-EecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCC
Q 022615          128 P--YREELEKMFTGM-PAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD  203 (294)
Q Consensus       128 ~--~~~~~~~~~~~~-~v~~-~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~  203 (294)
                      +  ..+.+++++... +|++ .|+++++++..+|+.||++++|+..|++|++++|||+||+|||+++.++..+++    +
T Consensus        80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~----~  155 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII----T  155 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC----C
T ss_pred             ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc----C
Confidence            8  777777776654 7999 999999999999999999999999999999999999999999999999999888    4


Q ss_pred             CcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHhCC
Q 022615          204 GKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       204 ~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s  247 (294)
                      +.+|+++++.|+++++++|.++++ |++.+.++++++++.+++||
T Consensus       156 ~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~fs  200 (200)
T 2bfw_A          156 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  200 (200)
T ss_dssp             TTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             CCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence            788999999999999999999999 99999999999999886565

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.97  E-value=1.3e-29  Score=191.28  Aligned_cols=158  Identities=23%  Similarity=0.336  Sum_probs=137.1

Q ss_pred             CceEEEeecccccccHHHHHHHHHhC---CCcEEEEEcCCccHHHHHhhhcCC--CeEEEecccchhHHHHHhcCCEEEe
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~---~~~~l~i~G~~~~~~~~~~~~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      +++|+|+|++.+.||++.+++++..+   ++++|+|+|.|+..+.+++++...  ++.+ |+++++++.++|+.||++++
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~   80 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVH   80 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEE
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEE
Confidence            46899999999999999999999988   479999999999888888877644  5788 99999999999999999999


Q ss_pred             ecCCCCcchHHHHHHhcCC-CEEe-ecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGI-PVVG-VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  243 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~-pvI~-~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  243 (294)
                      ||..|++|++++|||+||+ |||+ ++.++..+++   .++  +.++++.|+++++++|.+++++++.++++++++++.+
T Consensus        81 ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~  155 (166)
T 3qhp_A           81 AANVESEAIACLEAISVGIVPVIANSPLSATRQFA---LDE--RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA  155 (166)
T ss_dssp             CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGC---SSG--GGEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhc---cCC--ceEEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            9999999999999999998 9999 5678888988   444  4478888999999999999999999999999999999


Q ss_pred             HhCCHHHHHHH
Q 022615          244 EKYDWRAATRT  254 (294)
Q Consensus       244 ~~~s~~~~~~~  254 (294)
                      ++|+|+.++++
T Consensus       156 ~~~s~~~~~~~  166 (166)
T 3qhp_A          156 LNYTLENSVIQ  166 (166)
T ss_dssp             HHHC-------
T ss_pred             HHCChhhhhcC
Confidence            88999988763

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.97  E-value=7.6e-31  Score=225.54  Aligned_cols=205  Identities=15%  Similarity=0.160  Sum_probs=169.5

Q ss_pred             ccHHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecc
Q 022615           21 KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  100 (294)
Q Consensus        21 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~  100 (294)
                      ...+.+++.+++.+|.++++|+.+++.+.+.+     ++.+||||+|.+.|.+....         ..++.++++|+|++
T Consensus       166 ~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-----~i~vipngvd~~~f~~~~~~---------~~~~~~~i~~vGrl  231 (406)
T 2hy7_A          166 SYIEREFDRVAPTLDVIALVSPAMAAEVVSRD-----NVFHVGHGVDHNLDQLGDPS---------PYAEGIHAVAVGSM  231 (406)
T ss_dssp             HHHHHHHHHHGGGCSEEEESCGGGGGGCSCST-----TEEECCCCBCTTHHHHHCSC---------SCCSSEEEEEECCT
T ss_pred             HHHHHHHHHHHHhCCEEEEcCHHHHHHHHhcC-----CEEEEcCCcChHhcCccccc---------ccCCCcEEEEEecc
Confidence            34567889999999999999999999886542     89999999998776432111         12233789999999


Q ss_pred             cccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHH
Q 022615          101 GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM  180 (294)
Q Consensus       101 ~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~  180 (294)
                      .+.||+  +..+.+..++++|+|+|+|+    .+++....+|.++|+++++++.++|+.||++++||..|++|++++|||
T Consensus       232 ~~~Kg~--~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm  305 (406)
T 2hy7_A          232 LFDPEF--FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSS  305 (406)
T ss_dssp             TBCHHH--HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHC
T ss_pred             ccccCH--HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHH
Confidence            999998  44555667899999999987    233333457999999999999999999999999999999999999999


Q ss_pred             -------hcCCCEEeecCCCcccccccCCCCcceee-cCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHH
Q 022615          181 -------SSGIPVVGVRAGGIPDIIPEDQDGKIGYL-FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAAT  252 (294)
Q Consensus       181 -------a~G~pvI~~~~~~~~e~~~~~~~~~~g~~-~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~  252 (294)
                             |||+|||+|+.      +   .++.+|++ ++++|+++++++|..++++++         +...++|+|+.++
T Consensus       306 ~Kl~eYla~G~PVIas~~------v---~~~~~G~l~v~~~d~~~la~ai~~ll~~~~---------~~~~~~~sw~~~a  367 (406)
T 2hy7_A          306 MKLLQYDFFGLPAVCPNA------V---VGPYKSRFGYTPGNADSVIAAITQALEAPR---------VRYRQCLNWSDTT  367 (406)
T ss_dssp             HHHHHHHHHTCCEEEEGG------G---TCSCSSEEEECTTCHHHHHHHHHHHHHCCC---------CCCSCCCBHHHHH
T ss_pred             HHHHHHhhCCCcEEEehh------c---ccCcceEEEeCCCCHHHHHHHHHHHHhCcc---------hhhhhcCCHHHHH
Confidence                   99999999987      5   56788999 999999999999999999876         1234679999999


Q ss_pred             HHHHHHH--HHHHH
Q 022615          253 RTIRNEQ--YNAAI  264 (294)
Q Consensus       253 ~~~~~~l--~~~~~  264 (294)
                      ++++ ++  |+.+.
T Consensus       368 ~~~~-~~~~y~~~~  380 (406)
T 2hy7_A          368 DRVL-DPRAYPETR  380 (406)
T ss_dssp             HHHH-CGGGSGGGB
T ss_pred             HHHH-HhhcccccC
Confidence            9999 67  77653

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.95  E-value=1.1e-28  Score=214.71  Aligned_cols=197  Identities=17%  Similarity=0.176  Sum_probs=157.4

Q ss_pred             cCceEEeeccccCCCCCCCcc------chHHHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC----C----CcEE
Q 022615           56 ANKIRIWKKGVDSESFHPRFR------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P----EARI  121 (294)
Q Consensus        56 ~~~i~~i~~gvd~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~----~----~~~l  121 (294)
                      ..++.++|||+|.+.|.+...      ....+.+.    .++++|+++|++.+.||++.+++|++.+    |    +++|
T Consensus       218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~----~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~L  293 (482)
T 1uqt_A          218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRY  293 (482)
T ss_dssp             EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT----TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEE
T ss_pred             EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHh----CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEE
Confidence            357899999999887754211      11222222    2578999999999999999999999765    4    3779


Q ss_pred             EEEcCC-----cc----HHHHHhhhcC----------CCeEE-EecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHh
Q 022615          122 AFIGDG-----PY----REELEKMFTG----------MPAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  181 (294)
Q Consensus       122 ~i~G~~-----~~----~~~~~~~~~~----------~~v~~-~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a  181 (294)
                      +++|.+     +.    .+.++++..+          .+|.+ .|.++.+++..+|+.||++++||..||||++++||||
T Consensus       294 v~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA  373 (482)
T 1uqt_A          294 TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVA  373 (482)
T ss_dssp             EEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHH
T ss_pred             EEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHH
Confidence            999852     22    2334443321          13664 6899999999999999999999999999999999999


Q ss_pred             cCC-----CEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhC-hHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 022615          182 SGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEMEKYDWRAATRTI  255 (294)
Q Consensus       182 ~G~-----pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~  255 (294)
                      ||+     |+|+|+.++..+.+   .   +|+++++.|+++++++|.+++++ +++++++.+++++.+.+|+|+..++++
T Consensus       374 ~g~~~~~gpvV~S~~~G~~~~l---~---~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~  447 (482)
T 1uqt_A          374 AQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECF  447 (482)
T ss_dssp             HSCTTSCCEEEEETTBGGGGTC---T---TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             hCCCCCCCCEEEECCCCCHHHh---C---CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            997     89999988888877   2   78999999999999999999985 567889999999999889999999999


Q ss_pred             HHHHHHHH
Q 022615          256 RNEQYNAA  263 (294)
Q Consensus       256 ~~~l~~~~  263 (294)
                      + ..|+++
T Consensus       448 l-~~l~~~  454 (482)
T 1uqt_A          448 I-SDLKQI  454 (482)
T ss_dssp             H-HHHHHS
T ss_pred             H-HHHHhc
Confidence            9 666655

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.95  E-value=7.5e-27  Score=204.98  Aligned_cols=238  Identities=14%  Similarity=0.157  Sum_probs=174.0

Q ss_pred             HHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccc----hHHHHHh--------h--cCC-
Q 022615           24 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS----SEMRWRL--------S--NGE-   88 (294)
Q Consensus        24 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~----~~~~~~~--------~--~~~-   88 (294)
                      ..+++.....||.|+++|+.+++.++..++.+++.+  ||||+|...|.|....    ...+.+.        .  ... 
T Consensus       251 ~~~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~  328 (725)
T 3nb0_A          251 YCIERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFD  328 (725)
T ss_dssp             HHHHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSC
T ss_pred             HHHHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCC
Confidence            467999999999999999999999999877665544  9999999999885221    1111111        1  112 


Q ss_pred             -CCCceEEEeeccc-ccccHHHHHHHHHhCC--------C---cEEEEEcCCccH-------------------------
Q 022615           89 -PDKPLIVHVGRLG-VEKSLDFLKRVMDRLP--------E---ARIAFIGDGPYR-------------------------  130 (294)
Q Consensus        89 -~~~~~i~~~G~~~-~~k~~~~l~~~~~~~~--------~---~~l~i~G~~~~~-------------------------  130 (294)
                       ++.++++.+||+. ..||++.+++++.++.        +   +.|+|+..+...                         
T Consensus       329 ~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~  408 (725)
T 3nb0_A          329 LDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTS  408 (725)
T ss_dssp             GGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence             3445666689998 6899999999997652        1   556666532100                         


Q ss_pred             -------------------------H------H---HH------------------------------hhhc----C---
Q 022615          131 -------------------------E------E---LE------------------------------KMFT----G---  139 (294)
Q Consensus       131 -------------------------~------~---~~------------------------------~~~~----~---  139 (294)
                                               +      .   ++                              ..++    .   
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~  488 (725)
T 3nb0_A          409 IGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSP  488 (725)
T ss_dssp             HHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCT
T ss_pred             HhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCc
Confidence                                     0      0   00                              0000    0   


Q ss_pred             -C--CeEEE-ecccch------hHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC-----
Q 022615          140 -M--PAVFT-GMLLGE------ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG-----  204 (294)
Q Consensus       140 -~--~v~~~-g~~~~~------~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~-----  204 (294)
                       .  +|.|+ ++++..      ++.++|+.||++|+||.+|+||++++||||||+|||+++.++..+++   .++     
T Consensus       489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V---~dg~~~~~  565 (725)
T 3nb0_A          489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYM---EDLIETNQ  565 (725)
T ss_dssp             TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHH---HTTSCHHH
T ss_pred             CCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhh---hccccccC
Confidence             0  13444 556554      69999999999999999999999999999999999999999999988   443     


Q ss_pred             --cceeecC---CCCHHHHHHHHHHHh----h-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Q 022615          205 --KIGYLFN---PGDLDDCLSKLEPLL----Y-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFW  267 (294)
Q Consensus       205 --~~g~~~~---~~d~~~l~~~i~~ll----~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~  267 (294)
                        .+|+++.   +.++++++++|.+++    . ++..+..++.++++.+++|+|++++++++ .+|+.++.+.
T Consensus       566 ~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl-~~Ye~aL~~~  637 (725)
T 3nb0_A          566 AKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV-KARQLALRRG  637 (725)
T ss_dssp             HHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHH-HHHHHHHHHH
T ss_pred             CCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhc
Confidence              4688773   456666666665554    3 67778899999988888999999999999 8999998653

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.95  E-value=3e-27  Score=180.18  Aligned_cols=140  Identities=24%  Similarity=0.395  Sum_probs=127.7

Q ss_pred             CCCCceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhc------CCCeEEEecccchhHHHHHhcCC
Q 022615           88 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT------GMPAVFTGMLLGEELSQAYASGD  161 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~------~~~v~~~g~~~~~~~~~~~~~ad  161 (294)
                      .+++++|+|+|++.+.||++.++++++.+++++|+|+|.++..+.+++.+.      ..+|.+.|+++++++..+|+.||
T Consensus        20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad   99 (177)
T 2f9f_A           20 KCYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK   99 (177)
T ss_dssp             CCCCSCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred             CCCCCEEEEEeccccccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence            456778999999999999999999999999999999999876655555544      34899999999999999999999


Q ss_pred             EEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHH
Q 022615          162 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  231 (294)
Q Consensus       162 ~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~  231 (294)
                      ++++|+..|++|++++|||+||+|||+++.++..+++   .++.+|+++ +.|.++++++|.++++|++.
T Consensus       100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i---~~~~~g~~~-~~d~~~l~~~i~~l~~~~~~  165 (177)
T 2f9f_A          100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLV-NADVNEIIDAMKKVSKNPDK  165 (177)
T ss_dssp             EEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred             EEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHh---cCCCccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence            9999999999999999999999999999999999999   778899999 88999999999999998874

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.94  E-value=1.9e-26  Score=206.76  Aligned_cols=208  Identities=13%  Similarity=0.101  Sum_probs=167.9

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccccccHHHHHHH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRV  112 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~  112 (294)
                      .+|.++++|+..+.     +   .+++.+|||++.+....+.......+.+.  ..++..+++++|++.+ ||++.++++
T Consensus       328 ~~d~~i~~s~~~~~-----~---~~~i~~ipn~~~~~~~~~~~~~~~~r~~~--~~~~~~~v~~~g~~~~-K~~~~li~a  396 (568)
T 2vsy_A          328 LGDAFALPPALEPF-----Y---SEHVLRLQGAFQPSDTSRVVAEPPSRTQC--GLPEQGVVLCCFNNSY-KLNPQSMAR  396 (568)
T ss_dssp             EECTTTSCTTTGGG-----C---SSEEEECSSCSCCCCTTCCCCCCCCTGGG--TCCTTSCEEEECCCGG-GCCHHHHHH
T ss_pred             EECCCcCCcccccC-----C---cceeEcCCCcCCCCCCCCCCCCCCCcccc--CCCCCCEEEEeCCccc-cCCHHHHHH
Confidence            47888888887654     2   26899999966543221111111112222  2234446779999999 999999998


Q ss_pred             HHhC----CCcEEEEEc-CCccHHHHHhhhcC-----CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          113 MDRL----PEARIAFIG-DGPYREELEKMFTG-----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       113 ~~~~----~~~~l~i~G-~~~~~~~~~~~~~~-----~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      +..+    |+++|+|+| +|+..+.+++.+..     .+|.|.|+++++++..+|+.||++|+||.. |+|++++|||+|
T Consensus       397 ~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~  475 (568)
T 2vsy_A          397 MLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT  475 (568)
T ss_dssp             HHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT
T ss_pred             HHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC
Confidence            8654    899999999 88888877777653     469999999999999999999999999999 999999999999


Q ss_pred             CCCEEe-------ecCC-------CcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH---Hh
Q 022615          183 GIPVVG-------VRAG-------GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM---EK  245 (294)
Q Consensus       183 G~pvI~-------~~~~-------~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~---~~  245 (294)
                      |+|||+       ++.+       +..+++   .+          |+++++++|..+++|++.+.++++++++.+   +.
T Consensus       476 G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v---~~----------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~  542 (568)
T 2vsy_A          476 GCPVLTTPGETFAARVAGSLNHHLGLDEMN---VA----------DDAAFVAKAVALASDPAALTALHARVDVLRRASGV  542 (568)
T ss_dssp             TCCEEBCCCSSGGGSHHHHHHHHHTCGGGB---CS----------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSST
T ss_pred             CCCEEeccCCCchHHHHHHHHHHCCChhhh---cC----------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCC
Confidence            999999       9988       888877   22          899999999999999999999999999998   56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHH
Q 022615          246 YDWRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       246 ~s~~~~~~~~~~~l~~~~~~~  266 (294)
                      |+|+.+++++. .+|++++..
T Consensus       543 f~~~~~~~~~~-~~y~~~~~~  562 (568)
T 2vsy_A          543 FHMDGFADDFG-ALLQALARR  562 (568)
T ss_dssp             TCHHHHHHHHH-HHHHHHHHT
T ss_pred             CCHHHHHHHHH-HHHHHHHHH
Confidence            99999999998 899988754

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.94  E-value=7.1e-27  Score=199.01  Aligned_cols=220  Identities=18%  Similarity=0.182  Sum_probs=171.0

Q ss_pred             HHHHH-HHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCCCCCCCc-cchHHHHHhhcCCCCCceEEEeeccc
Q 022615           25 LVIKF-LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLG  101 (294)
Q Consensus        25 ~~~~~-~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~  101 (294)
                      ++.+. +.+.+|.++++|+..++.+.+. +.+++++.++||| +|...+.+.. .....+.+.   .++.++++++|++.
T Consensus       141 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~  216 (375)
T 3beo_A          141 EMNRQLTGVMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRE  216 (375)
T ss_dssp             HHHHHHHHHHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGG
T ss_pred             HhhhhHHhhhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccc
Confidence            34444 4456999999999999999874 5667899999999 7765443321 111222221   23445678999987


Q ss_pred             cc-ccHHHHHHHHHhC----CCcEEEEEcCCcc---HHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEeecCCCCc
Q 022615          102 VE-KSLDFLKRVMDRL----PEARIAFIGDGPY---REELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETL  172 (294)
Q Consensus       102 ~~-k~~~~l~~~~~~~----~~~~l~i~G~~~~---~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~  172 (294)
                      +. ||++.+++++..+    |++++++ |.|+.   .+.++++... .+|.+.|+++..++..+|+.||++++||     
T Consensus       217 ~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----  290 (375)
T 3beo_A          217 NLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----  290 (375)
T ss_dssp             GTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----
T ss_pred             cchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----
Confidence            75 9999999998754    6788654 65544   3444444332 5899999999899999999999999998     


Q ss_pred             chHHHHHHhcCCCEEeecC-CCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHH
Q 022615          173 GLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAA  251 (294)
Q Consensus       173 ~~~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~  251 (294)
                      |+.++|||+||+|||+++. ++..+++   .++ +|+++++ |+++++++|.++++|++.+++|+++++++.++|+|+.+
T Consensus       291 g~~~lEA~a~G~Pvi~~~~~~~~~e~v---~~g-~g~~v~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i  365 (375)
T 3beo_A          291 GGVQEEAPSLGVPVLVLRDTTERPEGI---EAG-TLKLAGT-DEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERI  365 (375)
T ss_dssp             HHHHHHHHHHTCCEEECSSCCSCHHHH---HTT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHH
T ss_pred             CChHHHHHhcCCCEEEecCCCCCceee---cCC-ceEEcCC-CHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHH
Confidence            6679999999999999964 8888988   666 8999976 99999999999999999999999988877777999999


Q ss_pred             HHHHHHHHH
Q 022615          252 TRTIRNEQY  260 (294)
Q Consensus       252 ~~~~~~~l~  260 (294)
                      ++.+. .++
T Consensus       366 ~~~~~-~~~  373 (375)
T 3beo_A          366 VEAIL-KHF  373 (375)
T ss_dssp             HHHHH-HHT
T ss_pred             HHHHH-HHh
Confidence            99887 443

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.93  E-value=5.6e-25  Score=189.60  Aligned_cols=222  Identities=14%  Similarity=0.098  Sum_probs=172.9

Q ss_pred             HHHhCCeEEecchhhHHHHHHh----c-cCC-------------cCceEEeeccccCCCCCCCccc--hHHHHHhhcCCC
Q 022615           30 LHRAADLTLVPSVAIGKDLEAA----R-VTA-------------ANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEP   89 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~----~-~~~-------------~~~i~~i~~gvd~~~~~~~~~~--~~~~~~~~~~~~   89 (294)
                      .+-.+|.|.+.+....+.|.+.    . +.+             ..++.++|+|||.+.|.+....  ...+.+.    .
T Consensus       204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~----~  279 (496)
T 3t5t_A          204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWA----D  279 (496)
T ss_dssp             HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHH----T
T ss_pred             HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHh----C
Confidence            3458999999998887776542    2 211             1367899999999988765321  2223332    2


Q ss_pred             CCceEEEeecccccccHHHHHHHHHhC----CC---cEEEEEcC-----CccHH----HHHhhhcCC-------CeEEEe
Q 022615           90 DKPLIVHVGRLGVEKSLDFLKRVMDRL----PE---ARIAFIGD-----GPYRE----ELEKMFTGM-------PAVFTG  146 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~~~l~~~~~~~----~~---~~l~i~G~-----~~~~~----~~~~~~~~~-------~v~~~g  146 (294)
                      ++++|+++|++.+.||+..+++|+ .+    |+   +.|+++|.     ++..+    .++++..+.       .|.++|
T Consensus       280 ~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g  358 (496)
T 3t5t_A          280 GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDN  358 (496)
T ss_dssp             TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeC
Confidence            578999999999999999999998 54    54   56777763     33333    333332221       589999


Q ss_pred             cccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcC---CCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG---IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G---~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~  223 (294)
                      .++.+++..+|+.||++++||..||||++.+||||||   .|+|+|+.+|..+.+     +.+|++++|.|+++++++|.
T Consensus       359 ~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l-----~~~allVnP~D~~~lA~AI~  433 (496)
T 3t5t_A          359 DNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL-----GEYCRSVNPFDLVEQAEAIS  433 (496)
T ss_dssp             CCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH-----GGGSEEECTTBHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh-----CCCEEEECCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999997   899999999888888     45799999999999999999


Q ss_pred             HHhhCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022615          224 PLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       224 ~ll~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      +++.++ ++++++.++.++.+.++++...++.+++.+-.
T Consensus       434 ~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~  472 (496)
T 3t5t_A          434 AALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAA  472 (496)
T ss_dssp             HHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence            999864 67888889999999999999999999966633

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.93  E-value=4.5e-27  Score=200.89  Aligned_cols=229  Identities=15%  Similarity=0.122  Sum_probs=172.7

Q ss_pred             HHHHH-HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCCc-c--c---hHHHHHhh-cCCCCCceEEE
Q 022615           26 VIKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRF-R--S---SEMRWRLS-NGEPDKPLIVH   96 (294)
Q Consensus        26 ~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~~-~--~---~~~~~~~~-~~~~~~~~i~~   96 (294)
                      ..+.+ .+.+|.++++|+..++.+.+ .+.+++++.+++||+ |...+.+.. .  .   ...+.+.+ ...++..++++
T Consensus       133 ~~~~~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~  211 (384)
T 1vgv_A          133 ANRTLTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT  211 (384)
T ss_dssp             HHHHHHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEE
T ss_pred             hhHHHHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEE
Confidence            44444 56699999999999999976 456678899999995 432111100 0  0   01111111 11223457889


Q ss_pred             eeccccc-ccHHHHHHHHHhC----CCcEEEEE-cCCc-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecC
Q 022615           97 VGRLGVE-KSLDFLKRVMDRL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus        97 ~G~~~~~-k~~~~l~~~~~~~----~~~~l~i~-G~~~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      +|++... ||++.+++++..+    +++++++. |.++ ..+.++++.. ..+|.+.|.++.+++.++|+.||++++|| 
T Consensus       212 ~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-  290 (384)
T 1vgv_A          212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-  290 (384)
T ss_dssp             CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-
T ss_pred             eCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC-
Confidence            9999775 9999999998664    68888875 5443 4556666543 24799999988899999999999999999 


Q ss_pred             CCCcchHHHHHHhcCCCEEeecC-CCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCC
Q 022615          169 SETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s  247 (294)
                          |..++|||+||+|||+++. ++..+++   +++ +|+++++ |+++++++|.++++|++.+++|+++++++.++++
T Consensus       291 ----g~~~lEA~a~G~PvI~~~~~~~~~e~v---~~g-~g~lv~~-d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~  361 (384)
T 1vgv_A          291 ----GGIQEEAPSLGKPVLVMRDTTERPEAV---TAG-TVRLVGT-DKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQA  361 (384)
T ss_dssp             ----STGGGTGGGGTCCEEEESSCCSCHHHH---HHT-SEEEECS-SHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCH
T ss_pred             ----cchHHHHHHcCCCEEEccCCCCcchhh---hCC-ceEEeCC-CHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCH
Confidence                4458999999999999986 8888888   566 8999977 9999999999999999999999998887777799


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYNAAIWF  266 (294)
Q Consensus       248 ~~~~~~~~~~~l~~~~~~~  266 (294)
                      |+.+++.+. .+|++..+.
T Consensus       362 ~~~i~~~~~-~~~~~~~~~  379 (384)
T 1vgv_A          362 CSRILEALK-NNRISLGSH  379 (384)
T ss_dssp             HHHHHHHHH-HTCCCC---
T ss_pred             HHHHHHHHH-HHHHhhccc
Confidence            999999998 677766543

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.92  E-value=2.6e-25  Score=188.59  Aligned_cols=209  Identities=18%  Similarity=0.192  Sum_probs=165.5

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCc-eEEEeeccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP-LIVHVGRLGVE  103 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~G~~~~~  103 (294)
                      ...+++.+.+|.+++.++..       +  +  ++.+++||++...+.+...    +..... .++.. ++++.|++.+.
T Consensus       133 ~~~~~~~~~~d~v~~~~~~~-------~--~--~~~~i~n~v~~~~~~~~~~----~~~~~~-~~~~~~il~~~g~~~~~  196 (364)
T 1f0k_A          133 LTNKWLAKIATKVMQAFPGA-------F--P--NAEVVGNPVRTDVLALPLP----QQRLAG-REGPVRVLVVGGSQGAR  196 (364)
T ss_dssp             HHHHHHTTTCSEEEESSTTS-------S--S--SCEECCCCCCHHHHTSCCH----HHHHTT-CCSSEEEEEECTTTCCH
T ss_pred             HHHHHHHHhCCEEEecChhh-------c--C--CceEeCCccchhhcccchh----hhhccc-CCCCcEEEEEcCchHhH
Confidence            35667888999999988765       2  2  6789999998776644221    122222 23344 55667799999


Q ss_pred             ccHHHHHHHHHhCC-CcE-EEEEcCCccHHHHHhhhcC---CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHH
Q 022615          104 KSLDFLKRVMDRLP-EAR-IAFIGDGPYREELEKMFTG---MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE  178 (294)
Q Consensus       104 k~~~~l~~~~~~~~-~~~-l~i~G~~~~~~~~~~~~~~---~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~E  178 (294)
                      |+.+.++++++.++ +++ ++++|.++. +.+++.+.+   .+|.+.|++  +++.++|+.||++++||.    |++++|
T Consensus       197 k~~~~li~a~~~l~~~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~E  269 (364)
T 1f0k_A          197 ILNQTMPQVAAKLGDSVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSE  269 (364)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECCc----hHHHHH
Confidence            99999999998875 677 567888873 555555442   379999999  899999999999999983    899999


Q ss_pred             HHhcCCCEEeecCCCcc--------cccccCCCCcceeecCCCC--HHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCH
Q 022615          179 AMSSGIPVVGVRAGGIP--------DIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW  248 (294)
Q Consensus       179 a~a~G~pvI~~~~~~~~--------e~~~~~~~~~~g~~~~~~d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~  248 (294)
                      ||+||+|||+++.++..        +++   + .+.|++++++|  +++++++|.++  |++.++++++++++.+++|+|
T Consensus       270 Ama~G~Pvi~~~~~g~~~~q~~~~~~~~---~-~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~  343 (364)
T 1f0k_A          270 IAAAGLPALFVPFQHKDRQQYWNALPLE---K-AGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDAT  343 (364)
T ss_dssp             HHHHTCCEEECCCCCTTCHHHHHHHHHH---H-TTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHH
T ss_pred             HHHhCCCEEEeeCCCCchhHHHHHHHHH---h-CCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHH
Confidence            99999999999998764        344   3 34599999888  99999999998  999999999999998888999


Q ss_pred             HHHHHHHHHHHHHHH
Q 022615          249 RAATRTIRNEQYNAA  263 (294)
Q Consensus       249 ~~~~~~~~~~l~~~~  263 (294)
                      +.+++++. .+|++.
T Consensus       344 ~~~~~~~~-~~y~~~  357 (364)
T 1f0k_A          344 ERVANEVS-RVARAL  357 (364)
T ss_dssp             HHHHHHHH-HHHTTC
T ss_pred             HHHHHHHH-HHHHHH
Confidence            99999998 788765

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.92  E-value=2e-24  Score=179.77  Aligned_cols=208  Identities=13%  Similarity=0.038  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           23 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        23 ~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      ....+++++++||.|+++|+.+++.+.+. |.+..++.++++. |...  +....         ...++++++|+|+++.
T Consensus       123 ~~~~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~~~ki~~~~~~-~~~~--~~~~~---------~~~~~~~i~yaG~l~k  189 (339)
T 3rhz_A          123 LMDRTIAYYNKADVVVAPSQKMIDKLRDF-GMNVSKTVVQGMW-DHPT--QAPMF---------PAGLKREIHFPGNPER  189 (339)
T ss_dssp             GHHHHHHHHTTCSEEEESCHHHHHHHHHT-TCCCSEEEECCSC-CCCC--CCCCC---------CCEEEEEEEECSCTTT
T ss_pred             hHHHHHHHHHHCCEEEECCHHHHHHHHHc-CCCcCceeecCCC-CccC--ccccc---------ccCCCcEEEEeCCcch
Confidence            34579999999999999999999999885 4555677655543 2211  11000         1234578999999985


Q ss_pred             cccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecC-------CCCcchH
Q 022615          103 EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-------SETLGLV  175 (294)
Q Consensus       103 ~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~-------~e~~~~~  175 (294)
                      ...+..+      .++++|+|+|+|++.    +  .. ||+|+|+++.+++..+++.+|+.+....       ....|++
T Consensus       190 ~~~L~~l------~~~~~f~ivG~G~~~----~--l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~K  256 (339)
T 3rhz_A          190 FSFVKEW------KYDIPLKVYTWQNVE----L--PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYK  256 (339)
T ss_dssp             CGGGGGC------CCSSCEEEEESCCCC----C--CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHH
T ss_pred             hhHHHhC------CCCCeEEEEeCCccc----C--cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHH
Confidence            3332221      378999999999875    1  23 9999999999999999999998887621       1256999


Q ss_pred             HHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 022615          176 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  255 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  255 (294)
                      ++||||||+|||+++.++..+++   +++.+|+.++  +.+++.++|..+  +++.+++|++++++..+++++...+++.
T Consensus       257 l~eymA~G~PVI~~~~~~~~~~v---~~~~~G~~~~--~~~e~~~~i~~l--~~~~~~~m~~na~~~a~~~~~~~f~k~~  329 (339)
T 3rhz_A          257 LGSFLAAGIPVIVQEGIANQELI---ENNGLGWIVK--DVEEAIMKVKNV--NEDEYIELVKNVRSFNPILRKGFFTRRL  329 (339)
T ss_dssp             HHHHHHHTCCEEEETTCTTTHHH---HHHTCEEEES--SHHHHHHHHHHC--CHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred             HHHHHHcCCCEEEccChhHHHHH---HhCCeEEEeC--CHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            99999999999999999999999   7788999887  789999999887  4667899999999998888888888887


Q ss_pred             HHHHHHHH
Q 022615          256 RNEQYNAA  263 (294)
Q Consensus       256 ~~~l~~~~  263 (294)
                      +.+.+.++
T Consensus       330 l~~~~~~~  337 (339)
T 3rhz_A          330 LTESVFQA  337 (339)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            76555444

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.90  E-value=3.2e-23  Score=176.05  Aligned_cols=197  Identities=14%  Similarity=0.150  Sum_probs=152.3

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      +.+++++.+|.++++|+..++.+.+. +.+  ++.++||+.    +.+.....     .  .. ..+++++.|+  ..|+
T Consensus       146 ~~~~~~~~~d~ii~~S~~~~~~l~~~-g~~--ki~vi~n~~----f~~~~~~~-----~--~l-~~~vi~~~~~--~~k~  208 (374)
T 2xci_A          146 IEKILSKKFDLIIMRTQEDVEKFKTF-GAK--RVFSCGNLK----FICQKGKG-----I--KL-KGEFIVAGSI--HTGE  208 (374)
T ss_dssp             HHHHHHTTCSEEEESCHHHHHHHHTT-TCC--SEEECCCGG----GCCCCCSC-----C--CC-SSCEEEEEEE--CGGG
T ss_pred             HHHHHHHhCCEEEECCHHHHHHHHHc-CCC--eEEEcCCCc----cCCCcChh-----h--hh-cCCEEEEEeC--CCch
Confidence            77888999999999999999999885 454  899999973    11111000     0  01 1245666554  4688


Q ss_pred             HHHHHHHHHhC----CCcEEEEEcCCccH-HHHHhhhcCCC------------eEEEecccchhHHHHHhcCCEEEeecC
Q 022615          106 LDFLKRVMDRL----PEARIAFIGDGPYR-EELEKMFTGMP------------AVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus       106 ~~~l~~~~~~~----~~~~l~i~G~~~~~-~~~~~~~~~~~------------v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      .+.+++++..+    |+++|+|+|.|+.+ +.+++++.+.+            |.+.|+.  +|+..+|+.||++++|+.
T Consensus       209 ~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss  286 (374)
T 2xci_A          209 VEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGT  286 (374)
T ss_dssp             HHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSS
T ss_pred             HHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCc
Confidence            99999998754    68999999999876 46777665433            4555554  899999999999888765


Q ss_pred             -CCCcchHHHHHHhcCCCEEee-cCCCcccccccCCC-CcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHh
Q 022615          169 -SETLGLVVLEAMSSGIPVVGV-RAGGIPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  245 (294)
Q Consensus       169 -~e~~~~~~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~-~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  245 (294)
                       .+++|.+++||||||+|||++ +.++..+.+   .+ ..+|.++.+.|+++++++|.++++| +.+++|++++++.+++
T Consensus       287 ~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~---~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~  362 (374)
T 2xci_A          287 FVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLK---EFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKGC  362 (374)
T ss_dssp             SSSSCCCCCHHHHTTTCCEEECSCCTTSHHHH---HHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred             ccCCCCcCHHHHHHhCCCEEECCCccChHHHH---HHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence             467899999999999999975 678888877   33 2467888888999999999999999 9899999999998754

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.86  E-value=5.7e-21  Score=162.61  Aligned_cols=219  Identities=17%  Similarity=0.135  Sum_probs=159.6

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE  103 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~  103 (294)
                      ...+++.+.+|.++++|+..++.+.+. +.+++++.+++|++ |...+.+.  ....+.  . ..++.+++++.|++...
T Consensus       138 ~~~~~~~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~--~~~~~~--~-~~~~~~vl~~~gr~~~~  211 (376)
T 1v4v_A          138 ANRRLTDVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAK--LGRLPE--G-LPEGPYVTVTMHRRENW  211 (376)
T ss_dssp             HHHHHHHHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHH--HCCCCT--T-CCSSCEEEECCCCGGGG
T ss_pred             HHHHHHHHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhh--hhHHHH--h-cCCCCEEEEEeCcccch
Confidence            445667788999999999999999875 56678899999975 42111000  000000  0 12344567788988777


Q ss_pred             ccHHHHHHHHHhC----CCcEEEEE-cCCc-cHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHH
Q 022615          104 KSLDFLKRVMDRL----PEARIAFI-GDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  176 (294)
Q Consensus       104 k~~~~l~~~~~~~----~~~~l~i~-G~~~-~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~  176 (294)
                      |+++.++++++.+    |++++++. |.++ ..+.++++... .+|.+.|+++..++..+|+.||+++.||     +..+
T Consensus       212 k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-----~g~~  286 (376)
T 1v4v_A          212 PLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQ  286 (376)
T ss_dssp             GGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-----cCHH
Confidence            8999999998754    68888886 7665 45666666443 4799999888889999999999999998     2337


Q ss_pred             HHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 022615          177 LEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  255 (294)
Q Consensus       177 ~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  255 (294)
                      +|||+||+|||++ +.++..+.+   . .++|++++ .|+++++++|.++++|++.+++|++++    +.|.+...++++
T Consensus       287 lEA~a~G~PvI~~~~~~~~~~~~---~-~g~g~lv~-~d~~~la~~i~~ll~d~~~~~~~~~~~----~~~~~~~~~~~i  357 (376)
T 1v4v_A          287 EEGAALGVPVVVLRNVTERPEGL---K-AGILKLAG-TDPEGVYRVVKGLLENPEELSRMRKAK----NPYGDGKAGLMV  357 (376)
T ss_dssp             HHHHHTTCCEEECSSSCSCHHHH---H-HTSEEECC-SCHHHHHHHHHHHHTCHHHHHHHHHSC----CSSCCSCHHHHH
T ss_pred             HHHHHcCCCEEeccCCCcchhhh---c-CCceEECC-CCHHHHHHHHHHHHhChHhhhhhcccC----CCCCCChHHHHH
Confidence            8999999999987 567777776   3 34788885 499999999999999998888888633    446666666666


Q ss_pred             HHHHHHHHH
Q 022615          256 RNEQYNAAI  264 (294)
Q Consensus       256 ~~~l~~~~~  264 (294)
                      . +++.+.+
T Consensus       358 ~-~~i~~~~  365 (376)
T 1v4v_A          358 A-RGVAWRL  365 (376)
T ss_dssp             H-HHHHHHT
T ss_pred             H-HHHHHHh
Confidence            6 4444443

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.75  E-value=3.6e-18  Score=145.99  Aligned_cols=217  Identities=18%  Similarity=0.141  Sum_probs=148.1

Q ss_pred             HHHHHH-HHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCCc--c----chHHHHHhhcCCCCCce-EE
Q 022615           25 LVIKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRF--R----SSEMRWRLSNGEPDKPL-IV   95 (294)
Q Consensus        25 ~~~~~~-~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~~--~----~~~~~~~~~~~~~~~~~-i~   95 (294)
                      ...+.+ .+.+|.++++|+..++.+.+. |.+++++.+++|++ |...+.+..  .    ....+.+.+...++..+ ++
T Consensus       157 ~~~r~~~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv  235 (396)
T 3dzc_A          157 EGNRKLTAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILV  235 (396)
T ss_dssp             HHHHHHHHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEE
T ss_pred             HHHHHHHHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEE
Confidence            455554 678899999999999999885 56778999999854 432211110  0    01122222211233344 44


Q ss_pred             Eeeccc-ccccHHHHHHHHHhC----CCcEEEEE-cCCc-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           96 HVGRLG-VEKSLDFLKRVMDRL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        96 ~~G~~~-~~k~~~~l~~~~~~~----~~~~l~i~-G~~~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      ..++.. ..++++.++++++.+    |++++++. |.++ ..+.+++... ..+|.+.+++...++..+|+.||+++.+|
T Consensus       236 ~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S  315 (396)
T 3dzc_A          236 TGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS  315 (396)
T ss_dssp             ECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC
T ss_pred             EECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC
Confidence            444432 346788899888765    78888875 6544 3445555433 34799999998889999999999999988


Q ss_pred             CCCCcchHHHHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhC
Q 022615          168 ESETLGLVVLEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY  246 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  246 (294)
                         |  +...||+++|+|+|++ +.++..+.+   +.+ .++++.. |.+++++++..+++|++.+++|++++..    |
T Consensus       316 ---G--g~~~EA~a~G~PvV~~~~~~~~~e~v---~~G-~~~lv~~-d~~~l~~ai~~ll~d~~~~~~m~~~~~~----~  381 (396)
T 3dzc_A          316 ---G--GIQEEAPSLGKPVLVMRETTERPEAV---AAG-TVKLVGT-NQQQICDALSLLLTDPQAYQAMSQAHNP----Y  381 (396)
T ss_dssp             ---S--GGGTTGGGGTCCEEECCSSCSCHHHH---HHT-SEEECTT-CHHHHHHHHHHHHHCHHHHHHHHTSCCT----T
T ss_pred             ---c--cHHHHHHHcCCCEEEccCCCcchHHH---HcC-ceEEcCC-CHHHHHHHHHHHHcCHHHHHHHhhccCC----C
Confidence               2  3348999999999998 677777777   455 4566654 7999999999999999988888876543    4


Q ss_pred             CHHHHHHHHH
Q 022615          247 DWRAATRTIR  256 (294)
Q Consensus       247 s~~~~~~~~~  256 (294)
                      .....++++.
T Consensus       382 ~~~~aa~ri~  391 (396)
T 3dzc_A          382 GDGKACQRIA  391 (396)
T ss_dssp             CCSCHHHHHH
T ss_pred             cCChHHHHHH
Confidence            3334444444

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.73  E-value=9.5e-18  Score=143.54  Aligned_cols=217  Identities=16%  Similarity=0.151  Sum_probs=149.6

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCCCCCCCc-cchHHHHHhhcCCCCCceEEEeecccc-
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGV-  102 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~G~~~~-  102 (294)
                      ..+++.+.+|.++++|+..++.+.+.+ .+++++.+++|. +|...+.+.. .....+.+.   .++..+++..|+... 
T Consensus       162 ~r~~~~~~a~~~~~~se~~~~~l~~~G-i~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~  237 (403)
T 3ot5_A          162 NRQLTGVMADIHFSPTKQAKENLLAEG-KDPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENL  237 (403)
T ss_dssp             HHHHHHHHCSEEEESSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHH
T ss_pred             HHHHHHHhcCEEECCCHHHHHHHHHcC-CCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCccccc
Confidence            344456679999999999999998864 677899999985 4543222211 111222221   233444555665432 


Q ss_pred             cccHHHHHHHHHh----CCCcEEEEE-cCCc-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          103 EKSLDFLKRVMDR----LPEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       103 ~k~~~~l~~~~~~----~~~~~l~i~-G~~~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      .++++.+++++..    .|++++++. |.++ ..+.+++... ..+|.+.++++..++..+|+.||+++.+|     |..
T Consensus       238 ~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~  312 (403)
T 3ot5_A          238 GEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGV  312 (403)
T ss_dssp             TTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHH
T ss_pred             CcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccH
Confidence            3667888887765    478888876 5443 3444554332 34799999998889999999999999887     444


Q ss_pred             HHHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHH
Q 022615          176 VLEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRT  254 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~  254 (294)
                      .+||+++|+|+|+. +.++..+.+   +.+ +++++.. |.+++++++..+++|++.+++|++++..+.+..+++++++.
T Consensus       313 ~~EA~a~g~PvV~~~~~~~~~e~v---~~g-~~~lv~~-d~~~l~~ai~~ll~~~~~~~~m~~~~~~~g~~~aa~rI~~~  387 (403)
T 3ot5_A          313 QEEAPGMGVPVLVLRDTTERPEGI---EAG-TLKLIGT-NKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAA  387 (403)
T ss_dssp             HHHGGGTTCCEEECCSSCSCHHHH---HHT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHH
T ss_pred             HHHHHHhCCCEEEecCCCcchhhe---eCC-cEEEcCC-CHHHHHHHHHHHHcCHHHHHHHHhhcCcccCCcHHHHHHHH
Confidence            48999999999998 667777777   444 6777765 89999999999999999888887655443333444444444


Q ss_pred             HH
Q 022615          255 IR  256 (294)
Q Consensus       255 ~~  256 (294)
                      +.
T Consensus       388 l~  389 (403)
T 3ot5_A          388 IK  389 (403)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.61  E-value=5.8e-15  Score=126.97  Aligned_cols=159  Identities=13%  Similarity=0.130  Sum_probs=119.7

Q ss_pred             CCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCC-ccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           89 PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDG-PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~-~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ++..++++.|+.. .++.+.+.++++.+  .+.++++++.+ ...+.++.+  ..+|.+.|++   ++.++|+.||++|.
T Consensus       241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~--~~~v~~~~~~---~~~~~l~~ad~~v~  314 (412)
T 3otg_A          241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEV--PANVRLESWV---PQAALLPHVDLVVH  314 (412)
T ss_dssp             TSCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCC--CTTEEEESCC---CHHHHGGGCSEEEE
T ss_pred             CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccC--CCcEEEeCCC---CHHHHHhcCcEEEE
Confidence            3456778888885 55555554444333  25666666543 323333322  3479999998   48899999999997


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      .+    .+++++|||++|+|+|+.+.++    ..+.+   .+.+.|+.+++.  |+++++++|.++++|++.++++++.+
T Consensus       315 ~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v---~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~  387 (412)
T 3otg_A          315 HG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAV---AQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVA  387 (412)
T ss_dssp             SC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CC----chHHHHHHHHhCCCEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            65    3478999999999999976643    45566   566788888876  89999999999999999999999999


Q ss_pred             HHHHHhCCHHHHHHHHHHHHHH
Q 022615          240 RQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       240 ~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      ++..+.++++.+++.+. .++.
T Consensus       388 ~~~~~~~~~~~~~~~~~-~l~~  408 (412)
T 3otg_A          388 AEIAAMPGPDEVVRLLP-GFAS  408 (412)
T ss_dssp             HHHHHSCCHHHHHTTHH-HHHC
T ss_pred             HHHhcCCCHHHHHHHHH-HHhc
Confidence            99888899999999887 5654

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.60  E-value=4.8e-14  Score=119.17  Aligned_cols=207  Identities=18%  Similarity=0.176  Sum_probs=138.7

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccccc
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  105 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~  105 (294)
                      ..+++.+.++.+++..+..       + ....++.++.+++..+.+......      .....+...++++.|+.+..+.
T Consensus       130 ~nr~l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~~~~------~~~~~~~~~ilv~gGs~g~~~~  195 (365)
T 3s2u_A          130 ANRSLAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDAHAR------APLTGRRVNLLVLGGSLGAEPL  195 (365)
T ss_dssp             HHHHHGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCTTSS------CCCTTSCCEEEECCTTTTCSHH
T ss_pred             HHHhhccccceeeeccccc-------c-cCcCcEEEECCCCchhhccchhhh------cccCCCCcEEEEECCcCCcccc
Confidence            4566778889888766543       1 234567778888776655432211      1112223345666677787777


Q ss_pred             HHHHHHHHHhCC---CcEEE-EEcCCccHHHHHhhhc--CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          106 LDFLKRVMDRLP---EARIA-FIGDGPYREELEKMFT--GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       106 ~~~l~~~~~~~~---~~~l~-i~G~~~~~~~~~~~~~--~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      .+.+.+++..++   ++.++ ++|.+. .+.+.+...  ..++.+.+++  +++.++|+.||++|.-+    .++++.|+
T Consensus       196 ~~~~~~al~~l~~~~~~~vi~~~G~~~-~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~aDlvI~ra----G~~Tv~E~  268 (365)
T 3s2u_A          196 NKLLPEALAQVPLEIRPAIRHQAGRQH-AEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVICRA----GALTVSEL  268 (365)
T ss_dssp             HHHHHHHHHTSCTTTCCEEEEECCTTT-HHHHHHHHHHTTCCCEEESCC--SCHHHHHHHCSEEEECC----CHHHHHHH
T ss_pred             chhhHHHHHhcccccceEEEEecCccc-cccccceecccccccccccch--hhhhhhhccceEEEecC----CcchHHHH
Confidence            888889998874   34444 345443 334444333  3368889999  89999999999999643    36889999


Q ss_pred             HhcCCCEEeecCCCc--------ccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHH
Q 022615          180 MSSGIPVVGVRAGGI--------PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR  249 (294)
Q Consensus       180 ~a~G~pvI~~~~~~~--------~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~  249 (294)
                      +++|+|+|..+.+..        .+.+   .+.+.|++++..  ++++++++|.+++.|++.+++|++++++.......+
T Consensus       269 ~a~G~P~Ilip~p~~~~~~Q~~NA~~l---~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~  345 (365)
T 3s2u_A          269 TAAGLPAFLVPLPHAIDDHQTRNAEFL---VRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATR  345 (365)
T ss_dssp             HHHTCCEEECC-----CCHHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHH
T ss_pred             HHhCCCeEEeccCCCCCcHHHHHHHHH---HHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHH
Confidence            999999998765432        1234   455667777654  589999999999999999999999998876656666


Q ss_pred             HHHHHHH
Q 022615          250 AATRTIR  256 (294)
Q Consensus       250 ~~~~~~~  256 (294)
                      ++++.++
T Consensus       346 ~ia~~i~  352 (365)
T 3s2u_A          346 TVVDACL  352 (365)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666555

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.59  E-value=5.1e-15  Score=128.08  Aligned_cols=206  Identities=14%  Similarity=0.075  Sum_probs=136.4

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCc-eEEeeccccCCCCCCCccchHHHHHhhc-CCCCCceEEEeeccccccc---HH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLGVEKS---LD  107 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~-i~~i~~gvd~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~k~---~~  107 (294)
                      .+|.+++.+....+.....  .+ .+ +..++++++.....+.         ... ..++..+++++|++. .+.   +.
T Consensus       185 ~~~~~l~~~~~~~~~~~~~--~~-~~~v~~vG~~~~~~~~~~~---------~~~~~~~~~~v~v~~Gs~~-~~~~~~~~  251 (430)
T 2iyf_A          185 HPPRSLVLIPKALQPHADR--VD-EDVYTFVGACQGDRAEEGG---------WQRPAGAEKVVLVSLGSAF-TKQPAFYR  251 (430)
T ss_dssp             CCSSEEECSCGGGSTTGGG--SC-TTTEEECCCCC-----CCC---------CCCCTTCSEEEEEECTTTC-C-CHHHHH
T ss_pred             CCCcEEEeCcHHhCCCccc--CC-CccEEEeCCcCCCCCCCCC---------CccccCCCCeEEEEcCCCC-CCcHHHHH
Confidence            5788888876554433221  22 24 6666655542110000         000 123446788999987 333   44


Q ss_pred             HHHHHHHhCCCcEE-EEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCE
Q 022615          108 FLKRVMDRLPEARI-AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  186 (294)
Q Consensus       108 ~l~~~~~~~~~~~l-~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pv  186 (294)
                      .++++++.++++++ +++|.+...+.++.+  ..+|.+.|++++.   ++|+.||++|..+    ..++++|||++|+|+
T Consensus       252 ~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~--~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~  322 (430)
T 2iyf_A          252 ECVRAFGNLPGWHLVLQIGRKVTPAELGEL--PDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPM  322 (430)
T ss_dssp             HHHHHHTTCTTEEEEEECC---CGGGGCSC--CTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCE
T ss_pred             HHHHHHhcCCCeEEEEEeCCCCChHHhccC--CCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCE
Confidence            55566665567777 567877654433221  3479999999654   7899999998754    247899999999999


Q ss_pred             EeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 022615          187 VGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  260 (294)
Q Consensus       187 I~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~  260 (294)
                      |+.+..+    ..+.+   .+.+.|+.++..  +.++++++|.++++|++.++++++.+++..+.++++.+++.+. .++
T Consensus       323 i~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~  398 (430)
T 2iyf_A          323 IAVPQAVDQFGNADML---QGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIE-AEL  398 (430)
T ss_dssp             EECCCSHHHHHHHHHH---HHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHH-TTS
T ss_pred             EECCCccchHHHHHHH---HHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHH-HHh
Confidence            9987653    34445   456778888766  8899999999999999988999998888877789999988887 566


Q ss_pred             HHHH
Q 022615          261 NAAI  264 (294)
Q Consensus       261 ~~~~  264 (294)
                      ++..
T Consensus       399 ~~~~  402 (430)
T 2iyf_A          399 PARH  402 (430)
T ss_dssp             CC--
T ss_pred             hccc
Confidence            5543

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.51  E-value=1.4e-14  Score=123.01  Aligned_cols=218  Identities=14%  Similarity=0.122  Sum_probs=142.1

Q ss_pred             HHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCC-CCccchHHHHHhhcCCCCCceEEEeecc---c
Q 022615           27 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRL---G  101 (294)
Q Consensus        27 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~G~~---~  101 (294)
                      .+.+-+.+|.++++++..++.+.+.+ .+++++.+++|.+ |.-.+. +.......+.+.+. .+++.+++..|+.   +
T Consensus       140 R~~~~~~a~~~~~~te~~~~~l~~~G-~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~  217 (385)
T 4hwg_A          140 RKIIDHISDVNITLTEHARRYLIAEG-LPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSL-TPKQYFLISSHREENVD  217 (385)
T ss_dssp             HHHHHHHCSEEEESSHHHHHHHHHTT-CCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTC-CTTSEEEEEECCC----
T ss_pred             HHHHHhhhceeecCCHHHHHHHHHcC-CCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCC-CcCCEEEEEeCCchhcC
Confidence            33445678999999999999998854 6778999999853 422111 00111122333332 2344455555553   3


Q ss_pred             ccccHHHHHHHHHhCC---CcEEEEEcCCccHHHHHhh---hc-CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          102 VEKSLDFLKRVMDRLP---EARIAFIGDGPYREELEKM---FT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       102 ~~k~~~~l~~~~~~~~---~~~l~i~G~~~~~~~~~~~---~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      ..+++..+++++..+.   ++.+++.......+.+++.   .. ..+|.+.+.++..++..+|+.||+++.+|     |.
T Consensus       218 ~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Gg  292 (385)
T 4hwg_A          218 VKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GT  292 (385)
T ss_dssp             -CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TT
T ss_pred             cHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----cc
Confidence            3467888898887663   5666665432233444443   22 24788999988889999999999999776     45


Q ss_pred             HHHHHHhcCCCEEeecCC-CcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHH-HHhCCHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDWRAAT  252 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~~-~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~-~~~~s~~~~~  252 (294)
                      ...||+++|+|+|+.... +.+|.+   +.| .+.++. .|.+++.+++..+++|++.+++|+.++..+ -+..+.++++
T Consensus       293 v~~EA~alG~Pvv~~~~~ter~e~v---~~G-~~~lv~-~d~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~  367 (385)
T 4hwg_A          293 ITEEASILNLPALNIREAHERPEGM---DAG-TLIMSG-FKAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKIL  367 (385)
T ss_dssp             HHHHHHHTTCCEEECSSSCSCTHHH---HHT-CCEECC-SSHHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHH
T ss_pred             HHHHHHHcCCCEEEcCCCccchhhh---hcC-ceEEcC-CCHHHHHHHHHHHHhChHHHHHhhccCCCCCCCChHHHHHH
Confidence            679999999999987543 345666   334 455554 389999999999999987776666555444 3345555555


Q ss_pred             HHHH
Q 022615          253 RTIR  256 (294)
Q Consensus       253 ~~~~  256 (294)
                      +.+.
T Consensus       368 ~~l~  371 (385)
T 4hwg_A          368 RIVL  371 (385)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.48  E-value=1.1e-13  Score=118.49  Aligned_cols=155  Identities=15%  Similarity=0.107  Sum_probs=109.9

Q ss_pred             CCCceEEEeecccc----------cccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHh
Q 022615           89 PDKPLIVHVGRLGV----------EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYA  158 (294)
Q Consensus        89 ~~~~~i~~~G~~~~----------~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~  158 (294)
                      +...+++++|++..          .+.+..+++++..+ ++++++.+.+...+.+..+  ..|+.+.|+++   +.+++.
T Consensus       226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~---~~~ll~  299 (398)
T 4fzr_A          226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-GFEVVVAVSDKLAQTLQPL--PEGVLAAGQFP---LSAIMP  299 (398)
T ss_dssp             SSCEEECC----------------CCSHHHHHHHGGGG-TCEEEECCCC--------C--CTTEEEESCCC---HHHHGG
T ss_pred             CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-CCEEEEEeCCcchhhhccC--CCcEEEeCcCC---HHHHHh
Confidence            34567778898853          45577888888776 6888888876654444432  34899999984   788999


Q ss_pred             cCCEEEeecCCCCcchHHHHHHhcCCCEEeecC----CCcccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHH
Q 022615          159 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELR  232 (294)
Q Consensus       159 ~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~----~~~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~  232 (294)
                      .||++|..    +.+++++|||++|+|+|+.+.    .+..+.+   .+.+.|+.++..  +.++++++|.++++|++.+
T Consensus       300 ~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~  372 (398)
T 4fzr_A          300 ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL---HAAGAGVEVPWEQAGVESVLAACARIRDDSSYV  372 (398)
T ss_dssp             GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred             hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence            99999954    346889999999999999544    3555666   567789888876  7889999999999999999


Q ss_pred             HHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          233 ETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       233 ~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +++++.+++..+..+++.+++.+.
T Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          373 GNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             HHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHh
Confidence            999999988888899999887764

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.43  E-value=7.6e-13  Score=99.50  Aligned_cols=131  Identities=15%  Similarity=0.241  Sum_probs=97.7

Q ss_pred             CCCceEEEeeccc---ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           89 PDKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        89 ~~~~~i~~~G~~~---~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      +...+++++|+..   +.+.+..+++++..++ .++++++.+...+   .  ...|+.+.++++++++..+ ..||++|.
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~~~~~---~--~~~~v~~~~~~~~~~~l~~-~~ad~~I~   92 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDGNKPD---T--LGLNTRLYKWIPQNDLLGH-PKTRAFIT   92 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCSSCCT---T--CCTTEEEESSCCHHHHHTS-TTEEEEEE
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECCcCcc---c--CCCcEEEecCCCHHHHhcC-CCcCEEEE
Confidence            3456888899985   6778888999998775 6777776554321   1  1348999999987554332 89999997


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~  233 (294)
                      .    +.+++++|+|++|+|+|+.+..+    ..+.+   .+.+.|+.++..  +.++++++|.+++.|++.++
T Consensus        93 ~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~  159 (170)
T 2o6l_A           93 H----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHM---KARGAAVRVDFNTMSSTDLLNALKRVINDPSYKE  159 (170)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHH
T ss_pred             c----CCccHHHHHHHcCCCEEeccchhhHHHHHHHH---HHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHH
Confidence            4    34689999999999999987642    34455   556788888766  78999999999999876433

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.41  E-value=3.3e-12  Score=109.26  Aligned_cols=159  Identities=16%  Similarity=0.138  Sum_probs=117.6

Q ss_pred             CCCceEEEeecccccc--cHHHHHHHHHhCCCcEEEE-EcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           89 PDKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~k--~~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      +...++++.|+....+  .+..+++++...+ +++++ +|.+...+.+.+  ...|+.+.+++++.   ++|..||++|.
T Consensus       230 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~--~~~~v~~~~~~~~~---~ll~~ad~~v~  303 (402)
T 3ia7_A          230 DAPVLLVSLGNQFNEHPEFFRACAQAFADTP-WHVVMAIGGFLDPAVLGP--LPPNVEAHQWIPFH---SVLAHARACLT  303 (402)
T ss_dssp             TCCEEEEECCSCSSCCHHHHHHHHHHHTTSS-CEEEEECCTTSCGGGGCS--CCTTEEEESCCCHH---HHHTTEEEEEE
T ss_pred             CCCEEEEECCCCCcchHHHHHHHHHHHhcCC-cEEEEEeCCcCChhhhCC--CCCcEEEecCCCHH---HHHhhCCEEEE
Confidence            3456788889886655  4666777777666 55554 576544433332  23489999999554   89999999987


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecC-----CCcccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRA-----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  238 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~-----~~~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~  238 (294)
                      .+.    .++++|++++|+|+|+...     ....+.+   .+.+.|..+..+  +.+++++++.++++|++.++++++.
T Consensus       304 ~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~  376 (402)
T 3ia7_A          304 HGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERV---IELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRM  376 (402)
T ss_dssp             CCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHH---HHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             CCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHH---HHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            652    4778999999999996544     3445555   456778888765  8999999999999999988888888


Q ss_pred             HHHHHHhCCHHHHHHHHHHHHHH
Q 022615          239 ARQEMEKYDWRAATRTIRNEQYN  261 (294)
Q Consensus       239 ~~~~~~~~s~~~~~~~~~~~l~~  261 (294)
                      +++..+..+++..++.+. .++.
T Consensus       377 ~~~~~~~~~~~~~~~~i~-~~~~  398 (402)
T 3ia7_A          377 QRDILSSGGPARAADEVE-AYLG  398 (402)
T ss_dssp             HHHHHTSCHHHHHHHHHH-HHHH
T ss_pred             HHHHhhCChHHHHHHHHH-HHHh
Confidence            888777788888888776 4543

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.39  E-value=8.1e-13  Score=112.78  Aligned_cols=154  Identities=12%  Similarity=0.087  Sum_probs=117.0

Q ss_pred             CCceEEEeecccccc-c----HHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEE
Q 022615           90 DKPLIVHVGRLGVEK-S----LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k-~----~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      +..+++..|+....+ +    +..++++ +.+|++++++.|.+...+.+...  ..|+.+.++++..+   ++..||++|
T Consensus       218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~~~~---ll~~ad~~v  291 (391)
T 3tsa_A          218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDL--PDNARIAESVPLNL---FLRTCELVI  291 (391)
T ss_dssp             SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTC--CTTEEECCSCCGGG---TGGGCSEEE
T ss_pred             CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccC--CCCEEEeccCCHHH---HHhhCCEEE
Confidence            345677778885422 2    5556667 77788999999876544333322  34799999986654   559999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecC----CCcccccccCCCCcceeecCC----CCHHHHHHHHHHHhhChHHHHHHH
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNP----GDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~----~~~~e~~~~~~~~~~g~~~~~----~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      ..    +.+++++|||++|+|+|+.+.    ....+.+   .+.+.|..+.+    .+.+++.+++.++++|++.+++++
T Consensus       292 ~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~  364 (391)
T 3tsa_A          292 CA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNL---AAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAI  364 (391)
T ss_dssp             EC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH---HHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHH
T ss_pred             eC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHH---HHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            54    345789999999999999544    3344555   56778888887    689999999999999999999999


Q ss_pred             HHHHHHHHhCCHHHHHHHHH
Q 022615          237 QAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       237 ~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +.+++..+..+++.+++.+.
T Consensus       365 ~~~~~~~~~~~~~~~~~~i~  384 (391)
T 3tsa_A          365 KLSDEITAMPHPAALVRTLE  384 (391)
T ss_dssp             HHHHHHHTSCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHH
Confidence            98888888899998888776

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.38  E-value=1.1e-11  Score=105.41  Aligned_cols=153  Identities=14%  Similarity=0.125  Sum_probs=114.1

Q ss_pred             CCceEEEeeccccc-------ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCE
Q 022615           90 DKPLIVHVGRLGVE-------KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDV  162 (294)
Q Consensus        90 ~~~~i~~~G~~~~~-------k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~  162 (294)
                      ...++++.|++...       +.+..+++++... ++++++.+.+...+.+...  ..++.+ |+++.   .++|..||+
T Consensus       210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~g~~~~~~l~~~--~~~v~~-~~~~~---~~~l~~~d~  282 (384)
T 2p6p_A          210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-DVELIVAAPDTVAEALRAE--VPQARV-GWTPL---DVVAPTCDL  282 (384)
T ss_dssp             SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-TCEEEEECCHHHHHHHHHH--CTTSEE-ECCCH---HHHGGGCSE
T ss_pred             CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-CcEEEEEeCCCCHHhhCCC--CCceEE-cCCCH---HHHHhhCCE
Confidence            35578889998764       6688888998876 6788876544433333332  458899 99854   567899999


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHH
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      +|..+    .+++++|||++|+|+|+.+..+    ..+.+   .+.+.|+.++..  +.++++++|.+++.|++.+++++
T Consensus       283 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~  355 (384)
T 2p6p_A          283 LVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRV---ADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQ  355 (384)
T ss_dssp             EEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             EEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHH---HHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            99763    3578999999999999987642    44445   445678877754  78999999999999999888888


Q ss_pred             HHHHHHHHhCCHHHHHHHHH
Q 022615          237 QAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       237 ~~~~~~~~~~s~~~~~~~~~  256 (294)
                      +.+.+....-..+..+..+.
T Consensus       356 ~~~~~~~~~~~~~~~~~~i~  375 (384)
T 2p6p_A          356 DLSREISGMPLPATVVTALE  375 (384)
T ss_dssp             HHHHHHHTSCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHHHHHH
Confidence            88877766666776666555

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.34  E-value=8.8e-12  Score=106.65  Aligned_cols=150  Identities=14%  Similarity=0.108  Sum_probs=112.8

Q ss_pred             CCceEEEeeccc----ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           90 DKPLIVHVGRLG----VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        90 ~~~~i~~~G~~~----~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ...++++.|++.    ..+.+..+++++... ++++++++.+...+.+...  ..|+.+.|++   ++.++|..||++|.
T Consensus       232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~g~~~~~~l~~~--~~~v~~~~~~---~~~~ll~~ad~~v~  305 (398)
T 3oti_A          232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEV-DADFVLALGDLDISPLGTL--PRNVRAVGWT---PLHTLLRTCTAVVH  305 (398)
T ss_dssp             SCEEEECCTTTHHHHHCGGGHHHHHHHHHTS-SSEEEEECTTSCCGGGCSC--CTTEEEESSC---CHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCCccccCcHHHHHHHHHHHHcC-CCEEEEEECCcChhhhccC--CCcEEEEccC---CHHHHHhhCCEEEE
Confidence            345778889884    344566677777766 6888888876654333322  3479999998   36678999999995


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEe----ecCCCcc--cccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVG----VRAGGIP--DIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQ  237 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~----~~~~~~~--e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~  237 (294)
                      .    +.+++++|||++|+|+|+    .+.....  +.+   .+.+.|+.++..  +.+.+.    ++++|++.++++++
T Consensus       306 ~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~---~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~  374 (398)
T 3oti_A          306 H----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV---SRRGIGLVSTSDKVDADLLR----RLIGDESLRTAARE  374 (398)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH---HHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHH
T ss_pred             C----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH---HHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHH
Confidence            4    345789999999999999    4556666  777   567788888755  455554    78889999999999


Q ss_pred             HHHHHHHhCCHHHHHHHHH
Q 022615          238 AARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       238 ~~~~~~~~~s~~~~~~~~~  256 (294)
                      .+++.....+++.+++.+.
T Consensus       375 ~~~~~~~~~~~~~~~~~l~  393 (398)
T 3oti_A          375 VREEMVALPTPAETVRRIV  393 (398)
T ss_dssp             HHHHHHTSCCHHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHH
Confidence            9988888899999998876

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.30  E-value=7.6e-12  Score=108.51  Aligned_cols=153  Identities=12%  Similarity=0.024  Sum_probs=113.0

Q ss_pred             CceEEEeecccc-----cccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           91 KPLIVHVGRLGV-----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        91 ~~~i~~~G~~~~-----~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ..++++.|+...     .+.+..+++++..+ ++++++.+.+...+.+..  ...||.+.+++++   .++|..||++|.
T Consensus       268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~g~~~~~~l~~--~~~~v~~~~~~~~---~~ll~~ad~~V~  341 (441)
T 2yjn_A          268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-DAEIIATFDAQQLEGVAN--IPDNVRTVGFVPM---HALLPTCAATVH  341 (441)
T ss_dssp             CEEEEEC----------CCSTTTTHHHHHTS-SSEEEECCCTTTTSSCSS--CCSSEEECCSCCH---HHHGGGCSEEEE
T ss_pred             CEEEEECCCCcccccChHHHHHHHHHHHHcC-CCEEEEEECCcchhhhcc--CCCCEEEecCCCH---HHHHhhCCEEEE
Confidence            457888998865     37788889999876 678877765543322221  1347999999965   456899999997


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      .    +.++++.|++++|+|+|+.+..+    ..+.+   .+.+.|+.++..  +.+++.++|.++++|++.++++++.+
T Consensus       342 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~  414 (441)
T 2yjn_A          342 H----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT---QEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMR  414 (441)
T ss_dssp             C----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             C----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH---HHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            4    34678999999999999987632    34445   455678887765  78999999999999999888888888


Q ss_pred             HHHHHhCCHHHHHHHHH
Q 022615          240 RQEMEKYDWRAATRTIR  256 (294)
Q Consensus       240 ~~~~~~~s~~~~~~~~~  256 (294)
                      ++.......+.+++.+.
T Consensus       415 ~~~~~~~~~~~~~~~i~  431 (441)
T 2yjn_A          415 DDMLAEPSPAEVVGICE  431 (441)
T ss_dssp             HHHHTSCCHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHH
Confidence            87777788888887776

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.30  E-value=1e-11  Score=106.78  Aligned_cols=157  Identities=13%  Similarity=0.084  Sum_probs=114.7

Q ss_pred             CCceEEEeecccccc--cHHHHHHHHHhCCCcEEEE-EcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEee
Q 022615           90 DKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k--~~~~l~~~~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      ...++++.|+.....  .+..++++++.++ +++++ +|.+...+.+..+  ..|+.+.+++++.   +++..||++|..
T Consensus       247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~~~l~~~--~~~v~~~~~~~~~---~ll~~ad~~v~~  320 (415)
T 3rsc_A          247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQP-WHVVMTLGGQVDPAALGDL--PPNVEAHRWVPHV---KVLEQATVCVTH  320 (415)
T ss_dssp             CCEEEEECTTTSCCCHHHHHHHHHHHTTSS-CEEEEECTTTSCGGGGCCC--CTTEEEESCCCHH---HHHHHEEEEEES
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHHhcCC-cEEEEEeCCCCChHHhcCC--CCcEEEEecCCHH---HHHhhCCEEEEC
Confidence            456677888875433  3666777777776 77766 6766544433322  3489999999654   889999999876


Q ss_pred             cCCCCcchHHHHHHhcCCCEEeecC----CCcccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHH
Q 022615          167 SESETLGLVVLEAMSSGIPVVGVRA----GGIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAAR  240 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~pvI~~~~----~~~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~  240 (294)
                      +    ..++++|++++|+|+|+...    ....+.+   ...+.|..+...  +.+++.++|.++++|++.++++++.+.
T Consensus       321 ~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~  393 (415)
T 3rsc_A          321 G----GMGTLMEALYWGRPLVVVPQSFDVQPMARRV---DQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRG  393 (415)
T ss_dssp             C----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             C----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHH---HHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            4    24688999999999998533    3344555   445677777655  889999999999999998888888888


Q ss_pred             HHHHhCCHHHHHHHHHHHHH
Q 022615          241 QEMEKYDWRAATRTIRNEQY  260 (294)
Q Consensus       241 ~~~~~~s~~~~~~~~~~~l~  260 (294)
                      +..+...++..++.+. .++
T Consensus       394 ~~~~~~~~~~~~~~i~-~~~  412 (415)
T 3rsc_A          394 HVRRAGGAARAADAVE-AYL  412 (415)
T ss_dssp             HHHHSCHHHHHHHHHH-HHH
T ss_pred             HHHhcCHHHHHHHHHH-HHh
Confidence            8777788888888776 444

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.27  E-value=2.5e-11  Score=106.72  Aligned_cols=171  Identities=14%  Similarity=0.113  Sum_probs=118.6

Q ss_pred             CceEEEeecccccccHHHHHHHH----HhCCCcEEE--EEcC--CccHHHHHh---hhcCCCeEEEecccchhHHHHHhc
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVM----DRLPEARIA--FIGD--GPYREELEK---MFTGMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~----~~~~~~~l~--i~G~--~~~~~~~~~---~~~~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      .++++.+++  ..|..+.+++++    ++.|+..+.  +.|.  +.....+++   ..-...+.+.|.++.++....|+.
T Consensus       441 ~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~  518 (631)
T 3q3e_A          441 VVNIGIAST--TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN  518 (631)
T ss_dssp             EEEEEEEEC--STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred             eEEEEECCc--cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence            355666665  467666666555    566876553  3563  233222222   222247899999999999999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC---CCCccee-ecCCCCHHHHHHHHHHHhhChHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~---~~~~~g~-~~~~~d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      +|+++.|+.+. .|++.+|||+||+|||+........-+...   .-|-.++ +..  |.+++.+....+..|++.+.++
T Consensus       519 aDIfLDpfpy~-GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~--d~eeYv~~Av~La~D~~~l~~L  595 (631)
T 3q3e_A          519 CDMMVNPFPFG-NTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN--TVDEYVERAVRLAENHQERLEL  595 (631)
T ss_dssp             CSEEECCSSSC-CSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES--SHHHHHHHHHHHHHCHHHHHHH
T ss_pred             CcEEEeCCccc-CChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC--CHHHHHHHHHHHhCCHHHHHHH
Confidence            99999998664 499999999999999997665544333000   0133443 444  8999999999999999999999


Q ss_pred             HHHHHHHH-H--hCCHHHHHHHHHHHHHHHHHHHHHH
Q 022615          236 GQAARQEM-E--KYDWRAATRTIRNEQYNAAIWFWRK  269 (294)
Q Consensus       236 ~~~~~~~~-~--~~s~~~~~~~~~~~l~~~~~~~~~~  269 (294)
                      +++.++.. .  -|+  ...+++. .+|+++..++..
T Consensus       596 R~~Lr~~~~~spLFd--~~~~~~e-~~ye~~~~~w~~  629 (631)
T 3q3e_A          596 RRYIIENNGLNTLFT--GDPRPMG-QVFLEKLNAFLK  629 (631)
T ss_dssp             HHHHHHSCCHHHHTC--SCCTHHH-HHHHHHHHHHHH
T ss_pred             HHHHHHHhhhCCCcc--hhHHHHH-HHHHHHHHHHHh
Confidence            99888774 2  244  5566776 788888776654

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.05  E-value=1.7e-09  Score=93.27  Aligned_cols=154  Identities=12%  Similarity=0.077  Sum_probs=105.3

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEE-EEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEee
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~-i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      +..+++..|+...  .+.+..++++++. .+++++ ++|.+...+.+..  ...|+.+.+++++.   ++|..||++|.-
T Consensus       255 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~-~~~~~~~~~g~~~~~~~~~~--~~~~v~~~~~~~~~---~~l~~~d~~v~~  328 (424)
T 2iya_A          255 RPVLLIALGSAFTDHLDFYRTCLSAVDG-LDWHVVLSVGRFVDPADLGE--VPPNVEVHQWVPQL---DILTKASAFITH  328 (424)
T ss_dssp             CCEEEEECCSSSCCCHHHHHHHHHHHTT-CSSEEEEECCTTSCGGGGCS--CCTTEEEESSCCHH---HHHTTCSEEEEC
T ss_pred             CCEEEEEcCCCCcchHHHHHHHHHHHhc-CCcEEEEEECCcCChHHhcc--CCCCeEEecCCCHH---HHHhhCCEEEEC
Confidence            4567778888862  2334455666655 456774 5676654333322  13479999999654   689999998864


Q ss_pred             cCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHH
Q 022615          167 SESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAAR  240 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~  240 (294)
                      +    ..++++|++++|+|+|+.+..+    ..+.+   ...+.|+.++..  +.+++.++|.++++|++.++++++.++
T Consensus       329 ~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~  401 (424)
T 2iya_A          329 A----GMGSTMEALSNAVPMVAVPQIAEQTMNAERI---VELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQ  401 (424)
T ss_dssp             C----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             C----chhHHHHHHHcCCCEEEecCccchHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            2    3478999999999999986642    23344   345677777644  889999999999999987777777766


Q ss_pred             HHHHhCCHHHHHHHHH
Q 022615          241 QEMEKYDWRAATRTIR  256 (294)
Q Consensus       241 ~~~~~~s~~~~~~~~~  256 (294)
                      +.......+..++.+.
T Consensus       402 ~~~~~~~~~~~~~~i~  417 (424)
T 2iya_A          402 EIREAGGARAAADILE  417 (424)
T ss_dssp             HHHTSCHHHHHHHHHH
T ss_pred             HHHhcCcHHHHHHHHH
Confidence            6555555666665554

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=98.97  E-value=5.2e-08  Score=88.08  Aligned_cols=192  Identities=14%  Similarity=0.151  Sum_probs=133.7

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-----ccCCcCceEEeeccccCCCC----CCCcc-------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF----HPRFR-------------------   76 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~~i~~gvd~~~~----~~~~~-------------------   76 (294)
                      .+.+..+..++.|-.+|+-..+.+++.     +...++++.-+-|||++..+    +|...                   
T Consensus       429 nMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~  508 (824)
T 2gj4_A          429 NMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLR  508 (824)
T ss_dssp             EHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGG
T ss_pred             cHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHH
Confidence            466778899999999999888888532     12235789999999998888    33110                   


Q ss_pred             -------chHH---------H--HH--------hh-cCCCCCceEEEeecccccccHHHH-HHHHHhC------C-----
Q 022615           77 -------SSEM---------R--WR--------LS-NGEPDKPLIVHVGRLGVEKSLDFL-KRVMDRL------P-----  117 (294)
Q Consensus        77 -------~~~~---------~--~~--------~~-~~~~~~~~i~~~G~~~~~k~~~~l-~~~~~~~------~-----  117 (294)
                             ....         .  .+        .+ ...++.+.++++.|+..+|+.+++ +..+..+      |     
T Consensus       509 ~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~  588 (824)
T 2gj4_A          509 KLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVV  588 (824)
T ss_dssp             GGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCC
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCC
Confidence                   0111         0  00        11 124567889999999999999886 5554433      3     


Q ss_pred             CcEEEEEcCCc--cHH--H----HHhhhc--------CC--CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHH
Q 022615          118 EARIAFIGDGP--YRE--E----LEKMFT--------GM--PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVL  177 (294)
Q Consensus       118 ~~~l~i~G~~~--~~~--~----~~~~~~--------~~--~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~  177 (294)
                      +++++|.|.+.  +..  .    +.....        ..  +|.|+...+-.--..++..||+.+.||.  .|++|++-+
T Consensus       589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~M  668 (824)
T 2gj4_A          589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM  668 (824)
T ss_dssp             CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred             CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence            46899999753  111  1    222222        11  4777777666777799999999999999  999999999


Q ss_pred             HHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHH
Q 022615          178 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  218 (294)
Q Consensus       178 Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l  218 (294)
                      =+|..|.+.|++-.|...|+... ....+|++|... .+++
T Consensus       669 KamlNGaLtigtlDGanvEi~e~-vG~~Ngf~FG~~-~~ev  707 (824)
T 2gj4_A          669 KFMLNGALTIGTMDGANVEMAEE-AGEENFFIFGMR-VEDV  707 (824)
T ss_dssp             HHHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSCC-HHHH
T ss_pred             HHHHcCceEEEEecCccchhhhc-cCCCCEEEeCCc-HHHH
Confidence            99999999999877766665511 145688988864 5665

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.96  E-value=1.9e-09  Score=92.67  Aligned_cols=136  Identities=12%  Similarity=0.110  Sum_probs=94.6

Q ss_pred             CCceEEEeecc-cccccHHHHHHHHHhCCCcEEEEE-cCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           90 DKPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        90 ~~~~i~~~G~~-~~~k~~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      +..++++.|+. ...+..+.++++++.++ .+++++ |.+...  ...  ...|+.+.+++++.   +++..||++|...
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~--~~~--~~~~v~~~~~~~~~---~~l~~~d~~v~~~  309 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-RRVILSRGWADLV--LPD--DGADCFAIGEVNHQ---VLFGRVAAVIHHG  309 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHTT-CCEEECTTCTTCC--CSS--CGGGEEECSSCCHH---HHGGGSSEEEECC
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-CeEEEEeCCCccc--ccC--CCCCEEEeCcCChH---HHHhhCCEEEeCC
Confidence            35678889998 47788888999998875 555554 755321  111  12378999999765   4579999999743


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                          ..++++||+++|+|+|+.+..+    ..+.+   .+.+.|+.++..  +.+++.++|.++ .|++.++++++.+++
T Consensus       310 ----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~  381 (415)
T 1iir_A          310 ----GAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT  381 (415)
T ss_dssp             ----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH
T ss_pred             ----ChhHHHHHHHcCCCEEECCCCCccHHHHHHH---HHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence                3478999999999999986643    33444   345677777643  789999999999 887766555544443

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=98.90  E-value=1e-07  Score=85.93  Aligned_cols=194  Identities=17%  Similarity=0.149  Sum_probs=135.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHh-----ccCCcCceEEeeccccCCCC----CCC---------------------
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF----HPR---------------------   74 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~~i~~gvd~~~~----~~~---------------------   74 (294)
                      .+.+..+..++.|-.+|+-..+.+++.     +..-+.++.-+.|||++..+    +|.                     
T Consensus       394 nMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l  473 (796)
T 2c4m_A          394 HMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDEL  473 (796)
T ss_dssp             EHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGG
T ss_pred             cHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHH
Confidence            456777889999999999998888741     22335789999999999888    232                     


Q ss_pred             ------ccch-------HH------------HHHhh-cCCCCCceEEEeecccccccHHH-HHHHHHhC-----------
Q 022615           75 ------FRSS-------EM------------RWRLS-NGEPDKPLIVHVGRLGVEKSLDF-LKRVMDRL-----------  116 (294)
Q Consensus        75 ------~~~~-------~~------------~~~~~-~~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~-----------  116 (294)
                            ....       ..            ..+.+ ...++.+.++++.|+..+|+.++ ++..+..+           
T Consensus       474 ~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~  553 (796)
T 2c4m_A          474 KKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDI  553 (796)
T ss_dssp             GGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred             HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCC
Confidence                  1110       00            11111 22456788999999999999998 66665433           


Q ss_pred             CCcEEEEEcCCc--cHHH------HHhhhc------C--C--CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHH
Q 022615          117 PEARIAFIGDGP--YREE------LEKMFT------G--M--PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVV  176 (294)
Q Consensus       117 ~~~~l~i~G~~~--~~~~------~~~~~~------~--~--~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~  176 (294)
                      .+++++|.|.+.  +...      +.....      .  .  +|.|+...+-.--..++..||+.+.||.  .|++|++-
T Consensus       554 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~  633 (796)
T 2c4m_A          554 PARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN  633 (796)
T ss_dssp             CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred             CCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            258899999753  2211      222222      1  1  4777777666777799999999999999  99999999


Q ss_pred             HHHHhcCCCEEeecCCCcccccccCCCCcceeecCC--CCHHHHH
Q 022615          177 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP--GDLDDCL  219 (294)
Q Consensus       177 ~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~--~d~~~l~  219 (294)
                      +=+|..|.+.|.+-.|...|+... ....+|++|..  .+..++.
T Consensus       634 MKam~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~~~~ev~~l~  677 (796)
T 2c4m_A          634 MKFMMNGALTLGTMDGANVEIVDS-VGEENAYIFGARVEELPALR  677 (796)
T ss_dssp             HHHHHTTCEEEEESSTHHHHHHHH-HCGGGSEEESCCTTTHHHHH
T ss_pred             HHHHHcCCeEEeccCCeEeehhhh-cCCCcEEEecCchhhHHHHH
Confidence            999999999998877766666521 12468888865  4444443

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=98.79  E-value=5.7e-08  Score=87.49  Aligned_cols=231  Identities=12%  Similarity=0.107  Sum_probs=152.7

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHh-----ccCCcCceEEeeccccCCCC----CCC----------------------
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF----HPR----------------------   74 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~i~~i~~gvd~~~~----~~~----------------------   74 (294)
                      +.+..+..++.|-.+|+-..+.+++.     +..-+.++.-+.|||++..+    +|.                      
T Consensus       406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~  485 (796)
T 1l5w_A          406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN  485 (796)
T ss_dssp             HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred             HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHH
Confidence            56677889999999999998888641     22335689999999987665    221                      


Q ss_pred             ----ccc----hH---H------------HHHhhc-CCCCCceEEEeecccccccHHH-HHHHHHhC-----------CC
Q 022615           75 ----FRS----SE---M------------RWRLSN-GEPDKPLIVHVGRLGVEKSLDF-LKRVMDRL-----------PE  118 (294)
Q Consensus        75 ----~~~----~~---~------------~~~~~~-~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~-----------~~  118 (294)
                          ...    .+   .            ..+.+. ..++.+.++++.|+..+|+.++ ++..+..+           .+
T Consensus       486 l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p  565 (796)
T 1l5w_A          486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP  565 (796)
T ss_dssp             GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCC
Confidence                111    00   0            111121 2456788999999999999998 67655433           25


Q ss_pred             cEEEEEcCCc--cHHH------HHhhhc---C---C----CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHH
Q 022615          119 ARIAFIGDGP--YREE------LEKMFT---G---M----PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLE  178 (294)
Q Consensus       119 ~~l~i~G~~~--~~~~------~~~~~~---~---~----~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~E  178 (294)
                      ++++|.|.+.  +...      +.....   +   .    +|.|+...+-.--..++..||+.+.||.  .|++|++-+=
T Consensus       566 ~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MK  645 (796)
T 1l5w_A          566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK  645 (796)
T ss_dssp             EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred             eEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence            8899999753  2211      222222   1   1    3777766666777799999999999999  9999999999


Q ss_pred             HHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHH------h-hChHHHHHHHHHHHHHHHhCCHHHH
Q 022615          179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL------L-YNQELRETMGQAARQEMEKYDWRAA  251 (294)
Q Consensus       179 a~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~l------l-~~~~~~~~~~~~~~~~~~~~s~~~~  251 (294)
                      +|..|.+.|.+-.|...|+... ....+|++|.. +.+++.+.-...      + .++ .++++...+..  ..|+|..-
T Consensus       646 am~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~--g~fs~~~~  720 (796)
T 1l5w_A          646 LALNGALTVGTLDGANVEIAEK-VGEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES--GKYSDGDK  720 (796)
T ss_dssp             HHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH--TTTTTTCT
T ss_pred             HHHcCCeeecCcCCeeeehhhc-cCCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc--CCCCCCcH
Confidence            9999999998877877776522 12469999986 777776432221      1 233 23333332222  35888763


Q ss_pred             HHHHHHHHHHHH
Q 022615          252 TRTIRNEQYNAA  263 (294)
Q Consensus       252 ~~~~~~~l~~~~  263 (294)
                       ..+. .+|+.+
T Consensus       721 -~~y~-~Ly~~L  730 (796)
T 1l5w_A          721 -HAFD-QMLHSI  730 (796)
T ss_dssp             -TTTH-HHHHHT
T ss_pred             -HHHH-HHHHHH
Confidence             5555 666665

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=98.74  E-value=8.3e-07  Score=81.24  Aligned_cols=179  Identities=10%  Similarity=0.093  Sum_probs=127.1

Q ss_pred             CCCCceEEEeeccccc--ccHHHHHHHHHhCCCcEEEEEcCCc-cHHHHHhhhcC-----CCeEEEecccchhHHHHHhc
Q 022615           88 EPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFTG-----MPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        88 ~~~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~-----~~v~~~g~~~~~~~~~~~~~  159 (294)
                      +++.++++++.++.+.  .-+....+++++.|+-+|++..... ....+.+....     .++.|.+..+.++....++.
T Consensus       520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~  599 (723)
T 4gyw_A          520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL  599 (723)
T ss_dssp             CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred             CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence            4455666666655332  2355667788889999998876543 33444444432     25899999999999999999


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccC---CCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~---~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      +|++|-+.-+ +.+++.+||+.+|+|||+-....+..-+...   .-|-..++..  |.++..+....+..|++.+.+++
T Consensus       600 ~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~--~~~~Y~~~a~~la~d~~~l~~lr  676 (723)
T 4gyw_A          600 ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK--NRQEYEDIAVKLGTDLEYLKKVR  676 (723)
T ss_dssp             CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC--CHHHHHHHHHHHhcCHHHHHHHH
Confidence            9999987554 4578899999999999986543332221000   0022233444  88999999999999999999998


Q ss_pred             HHHHHHHH---hCCHHHHHHHHHHHHHHHHHHHHHHh
Q 022615          237 QAARQEME---KYDWRAATRTIRNEQYNAAIWFWRKK  270 (294)
Q Consensus       237 ~~~~~~~~---~~s~~~~~~~~~~~l~~~~~~~~~~~  270 (294)
                      +..++...   -|+-...++.+. ..|+++-.++..-
T Consensus       677 ~~l~~~~~~s~l~d~~~~~~~le-~a~~~~w~r~~~G  712 (723)
T 4gyw_A          677 GKVWKQRISSPLFNTKQYTMELE-RLYLQMWEHYAAG  712 (723)
T ss_dssp             HHHHHHHHHSSTTCHHHHHHHHH-HHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCcCcCHHHHHHHHH-HHHHHHHHHHHcC
Confidence            88877753   289999999998 8999986665443

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=98.70  E-value=3.2e-08  Score=84.97  Aligned_cols=135  Identities=10%  Similarity=0.064  Sum_probs=93.6

Q ss_pred             CCceEEEeeccc---ccccHHHHHHHHHhCCCcEEEEE-cCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           90 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        90 ~~~~i~~~G~~~---~~k~~~~l~~~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      +..+++..|+..   ..+....++++++.++ .++++. |.+...  ..  ....|+.+.+++++   .++|..||++|.
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~--~~--~~~~~v~~~~~~~~---~~ll~~~d~~v~  308 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQG-RRVILSRGWTELV--LP--DDRDDCFAIDEVNF---QALFRRVAAVIH  308 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHTT-CCEEEECTTTTCC--CS--CCCTTEEEESSCCH---HHHGGGSSEEEE
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHHCC-CeEEEEeCCcccc--cc--CCCCCEEEeccCCh---HHHhccCCEEEe
Confidence            356778888874   4666788888888774 566654 765321  11  11347999999964   557899999997


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCC--CCHHHHHHHHHHHhhChHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAA  239 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~~~~~~~  239 (294)
                      -    +..+++.|++++|+|+|+.+..+    ..+.+   .+.+.|..++.  .+.+++.++|.++ .|++.++++++.+
T Consensus       309 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~  380 (416)
T 1rrv_A          309 H----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVA  380 (416)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHT
T ss_pred             c----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHH---HHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHH
Confidence            3    33579999999999999976532    22334   34566766653  4789999999999 8877665555444


Q ss_pred             H
Q 022615          240 R  240 (294)
Q Consensus       240 ~  240 (294)
                      +
T Consensus       381 ~  381 (416)
T 1rrv_A          381 G  381 (416)
T ss_dssp             T
T ss_pred             H
Confidence            3

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=98.68  E-value=6.7e-08  Score=82.68  Aligned_cols=152  Identities=12%  Similarity=0.059  Sum_probs=100.1

Q ss_pred             CCCceEEEeeccc-ccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           89 PDKPLIVHVGRLG-VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        89 ~~~~~i~~~G~~~-~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      +...+++..|+.. ..+.+..++++++.. ++++++.+.....+   ......|+.+.+++++   .+++..||++|.-+
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-~~~vv~~~g~~~~~---~~~~~~~v~~~~~~~~---~~ll~~~d~~v~~g  292 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-GRRVVLSSGWAGLG---RIDEGDDCLVVGEVNH---QVLFGRVAAVVHHG  292 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHHT-TCCEEEECTTTTCC---CSSCCTTEEEESSCCH---HHHGGGSSEEEECC
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCcccc---cccCCCCEEEecCCCH---HHHHhhCcEEEECC
Confidence            3456788889887 677788889998887 46666654322111   1112458999999864   56788999999654


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCCc----ccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                          ..+++.|++++|+|+|+....+-    .+.+   ...+.|..+...  +.+++.+++.++++ ++.++++++.+..
T Consensus       293 ----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~  364 (404)
T 3h4t_A          293 ----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRV---ADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGT  364 (404)
T ss_dssp             ----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTT
T ss_pred             ----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHH---HHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence                23788999999999998765432    2223   334566666533  78999999999998 7665555544443


Q ss_pred             HHHhCCHHHHHHHHH
Q 022615          242 EMEKYDWRAATRTIR  256 (294)
Q Consensus       242 ~~~~~s~~~~~~~~~  256 (294)
                      ... ...+..++.+.
T Consensus       365 ~~~-~~~~~~~~~i~  378 (404)
T 3h4t_A          365 IRT-DGTTVAAKLLL  378 (404)
T ss_dssp             CCC-CHHHHHHHHHH
T ss_pred             Hhh-hHHHHHHHHHH
Confidence            333 34444444443

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=98.57  E-value=9.4e-08  Score=81.50  Aligned_cols=152  Identities=14%  Similarity=0.101  Sum_probs=93.4

Q ss_pred             CCceEEEeecccccc----cHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           90 DKPLIVHVGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k----~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ...+++..|++...+    -+..+++++... +..+++.+.+........  ...|+.+.+++|+   .++|..+|++|.
T Consensus       237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~--~~~~v~~~~~~p~---~~lL~~~~~~v~  310 (400)
T 4amg_A          237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADV-DAEFVLTLGGGDLALLGE--LPANVRVVEWIPL---GALLETCDAIIH  310 (400)
T ss_dssp             CCEEEECCCSCC--CCSSSTTHHHHHHGGGS-SSEEEEECCTTCCCCCCC--CCTTEEEECCCCH---HHHHTTCSEEEE
T ss_pred             CcEEEEeCCcccccCccHHHHHHHHHHhhcc-CceEEEEecCcccccccc--CCCCEEEEeecCH---HHHhhhhhheec
Confidence            345667778775433    244555555554 455555543322111111  1247899999864   457889999874


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  241 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  241 (294)
                      -    +..+++.|++++|+|+|+.+..+    ..+.+   .+.+.|+.++  +.+..+++|.++++|++.+++.++-+.+
T Consensus       311 h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v---~~~G~g~~l~--~~~~~~~al~~lL~d~~~r~~a~~l~~~  381 (400)
T 4amg_A          311 H----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL---TGLGIGFDAE--AGSLGAEQCRRLLDDAGLREAALRVRQE  381 (400)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCC---CHHHHHHH---HHHTSEEECC--TTTCSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             c----CCccHHHHHHHhCCCEEEecCcccHHHHHHHH---HHCCCEEEcC--CCCchHHHHHHHHcCHHHHHHHHHHHHH
Confidence            3    34578999999999999865543    23344   3345566665  3445678999999999877666655555


Q ss_pred             HHHhCCHHHHHHHHH
Q 022615          242 EMEKYDWRAATRTIR  256 (294)
Q Consensus       242 ~~~~~s~~~~~~~~~  256 (294)
                      ....-+....+..+.
T Consensus       382 ~~~~~~~~~~a~~le  396 (400)
T 4amg_A          382 MSEMPPPAETAAXLV  396 (400)
T ss_dssp             HHTSCCHHHHHHHHH
T ss_pred             HHcCCCHHHHHHHHH
Confidence            544556666666654

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.29  E-value=2.1e-05  Score=72.32  Aligned_cols=218  Identities=13%  Similarity=0.028  Sum_probs=119.7

Q ss_pred             HHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCcc---chHHHHHhhcCCCCCceEEEeecccccc--
Q 022615           30 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR---SSEMRWRLSNGEPDKPLIVHVGRLGVEK--  104 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~G~~~~~k--  104 (294)
                      ...+.|.+++.|+.+.+.+.+.++.+++++...+.+=....+.....   ....+... ...+++++|+|+-+++...  
T Consensus       475 ~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~-~~~~~kk~ILyaPT~r~~~~~  553 (729)
T 3l7i_A          475 ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHL-NLPSDKKVIMYAPTWRDDEFV  553 (729)
T ss_dssp             HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHT-TCCSSCEEEEECCCCCGGGCC
T ss_pred             hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHh-CCCCCCeEEEEeeeeeCCccc
Confidence            34678999999999999999998876566655543321112211111   11122222 2356788999999876542  


Q ss_pred             -----------cHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhc--C-CCeEEEecccchhHHHHHhcCCEEEeecCCC
Q 022615          105 -----------SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT--G-MPAVFTGMLLGEELSQAYASGDVFVMPSESE  170 (294)
Q Consensus       105 -----------~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~--~-~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e  170 (294)
                                 +++.+.+.+.  ++..+++-.. +.   +.....  . .+. +...-+..++.++|..||++|.-    
T Consensus       554 ~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~H-p~---~~~~~~~~~~~~~-~~~~~~~~di~~ll~~aD~lITD----  622 (729)
T 3l7i_A          554 SKGKYLFELKIDLDNLYKELG--DDYVILLRMH-YL---ISNALDLSGYENF-AIDVSNYNDVSELFLISDCLITD----  622 (729)
T ss_dssp             GGGSSCCCCTTCHHHHHHHHT--TTEEEEECCC-HH---HHTTCCCTTCTTT-EEECTTCSCHHHHHHTCSEEEES----
T ss_pred             cccccccchhhHHHHHHHHcC--CCeEEEEecC-cc---hhccccccccCCc-EEeCCCCcCHHHHHHHhCEEEee----
Confidence                       2344444443  3565555443 21   111111  1 111 12222346899999999999854    


Q ss_pred             CcchHHHHHHhcCCCEEeecCCCcccccc-------cCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Q 022615          171 TLGLVVLEAMSSGIPVVGVRAGGIPDIIP-------EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  243 (294)
Q Consensus       171 ~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~-------~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  243 (294)
                       ++..++|++..++|||..... ..++..       +......|-++.  +.+++.++|.......+.+.+..+.-.+..
T Consensus       623 -ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~  698 (729)
T 3l7i_A          623 -YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT--EPYGLAKELKNLDKVQQQYQEKIDAFYDRF  698 (729)
T ss_dssp             -SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHH
T ss_pred             -chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC--CHHHHHHHHhhhhccchhHHHHHHHHHHHh
Confidence             377899999999999976221 122210       001223344444  889999999887654433333222222222


Q ss_pred             HhCCHHHHHHHHHHHHHHHH
Q 022615          244 EKYDWRAATRTIRNEQYNAA  263 (294)
Q Consensus       244 ~~~s~~~~~~~~~~~l~~~~  263 (294)
                      -.|.--..++++.+.+++..
T Consensus       699 ~~~~dg~as~ri~~~i~~~~  718 (729)
T 3l7i_A          699 CSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             STTCCSCHHHHHHHHHHHHH
T ss_pred             CCccCChHHHHHHHHHHhcC
Confidence            22332345555555555443

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.22  E-value=6.6e-06  Score=66.28  Aligned_cols=92  Identities=8%  Similarity=0.024  Sum_probs=67.1

Q ss_pred             ceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCc-cHHHHHhhhc-CCCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615           92 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      .+++.+|..+...-...+++++..... -.+++|.+. ..+.+++... ..++.+.+++  +++.++|+.||++|.+.  
T Consensus       159 ~ILv~~GG~d~~~l~~~vl~~L~~~~~-i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI~~g--  233 (282)
T 3hbm_A          159 DFFICMGGTDIKNLSLQIASELPKTKI-ISIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLIISA--  233 (282)
T ss_dssp             EEEEECCSCCTTCHHHHHHHHSCTTSC-EEEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEEEES--
T ss_pred             eEEEEECCCchhhHHHHHHHHhhcCCC-EEEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEEECC--
Confidence            466788877666555666676655443 335567653 4566666544 3479999998  99999999999999853  


Q ss_pred             CCcchHHHHHHhcCCCEEeecC
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRA  191 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~  191 (294)
                         |+++.|++++|+|.|.-+.
T Consensus       234 ---G~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          234 ---SSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             ---SHHHHHHHHTTCCEEEECC
T ss_pred             ---cHHHHHHHHcCCCEEEEeC
Confidence               5799999999999987643

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.20  E-value=3.2e-05  Score=66.76  Aligned_cols=199  Identities=12%  Similarity=0.026  Sum_probs=108.1

Q ss_pred             HHHhCCeEEecchhhHHH--HHHhccCCcCceEEeeccc-cCCCCCCCccchHHHHHhhcCCCCCceEEEeeccccc--c
Q 022615           30 LHRAADLTLVPSVAIGKD--LEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE--K  104 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~--~~~~~~~~~~~i~~i~~gv-d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~--k  104 (294)
                      ....++.+++.|-...+.  +....... .++..|..-. .... .......+...-.....++..+++..|.....  .
T Consensus       212 ~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~~-~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~  289 (454)
T 3hbf_A          212 ELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTPQ-RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPH  289 (454)
T ss_dssp             HGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSCC-SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHH
T ss_pred             hhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECCccccccc-ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHH
Confidence            356799999988665432  11111111 2455443211 1110 00011111122222223445667777877532  2


Q ss_pred             cHHHHHHHHHhCCCcEEEEE-cCCccHHH----HHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHH
Q 022615          105 SLDFLKRVMDRLPEARIAFI-GDGPYREE----LEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA  179 (294)
Q Consensus       105 ~~~~l~~~~~~~~~~~l~i~-G~~~~~~~----~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea  179 (294)
                      .+..++++++.. +.++++. |.+. .+.    +.+.. ..|+.+.+++|+   ..++..+++.++-+.  +.-++++|+
T Consensus       290 ~~~el~~~l~~~-~~~flw~~~~~~-~~~lp~~~~~~~-~~~~~vv~w~Pq---~~vL~h~~v~~fvtH--~G~~S~~Ea  361 (454)
T 3hbf_A          290 ELTALAESLEEC-GFPFIWSFRGDP-KEKLPKGFLERT-KTKGKIVAWAPQ---VEILKHSSVGVFLTH--SGWNSVLEC  361 (454)
T ss_dssp             HHHHHHHHHHHH-CCCEEEECCSCH-HHHSCTTHHHHT-TTTEEEESSCCH---HHHHHSTTEEEEEEC--CCHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCeEEEEeCCcc-hhcCCHhHHhhc-CCceEEEeeCCH---HHHHhhcCcCeEEec--CCcchHHHH
Confidence            244555566554 4555544 4322 111    11111 247888899976   478899997665554  345789999


Q ss_pred             HhcCCCEEeecCCC----cccccccCCC-CcceeecCC--CCHHHHHHHHHHHhhChHHHHHHHHHHHHH
Q 022615          180 MSSGIPVVGVRAGG----IPDIIPEDQD-GKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQE  242 (294)
Q Consensus       180 ~a~G~pvI~~~~~~----~~e~~~~~~~-~~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  242 (294)
                      +++|+|+|+.+..+    ....+   .+ .+.|+.+..  -+.+++.++|.+++++++ .+++++++++.
T Consensus       362 l~~GvP~i~~P~~~DQ~~Na~~v---~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~-~~~~r~~a~~l  427 (454)
T 3hbf_A          362 IVGGVPMISRPFFGDQGLNTILT---ESVLEIGVGVDNGVLTKESIKKALELTMSSEK-GGIMRQKIVKL  427 (454)
T ss_dssp             HHHTCCEEECCCSTTHHHHHHHH---HTTSCSEEECGGGSCCHHHHHHHHHHHHSSHH-HHHHHHHHHHH
T ss_pred             HHcCCCEecCcccccHHHHHHHH---HHhhCeeEEecCCCCCHHHHHHHHHHHHCCCh-HHHHHHHHHHH
Confidence            99999999976532    12223   33 266666653  468999999999998742 34455555443

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.08  E-value=6.3e-05  Score=65.71  Aligned_cols=144  Identities=10%  Similarity=0.075  Sum_probs=90.0

Q ss_pred             CCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEE-cCCc-------cHHHHHhhhcCCCeEEEecccchhHHHHHhc
Q 022615           90 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP-------YREELEKMFTGMPAVFTGMLLGEELSQAYAS  159 (294)
Q Consensus        90 ~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~-G~~~-------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~  159 (294)
                      +..+++..|....  ...+..++++++..+ .++++. |...       ..+.+.+.. ..|+.+.+++|+.   ++|+.
T Consensus       295 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~~~pq~---~~L~h  369 (482)
T 2pq6_A          295 GSVVYVNFGSTTVMTPEQLLEFAWGLANCK-KSFLWIIRPDLVIGGSVIFSSEFTNEI-ADRGLIASWCPQD---KVLNH  369 (482)
T ss_dssp             TCEEEEECCSSSCCCHHHHHHHHHHHHHTT-CEEEEECCGGGSTTTGGGSCHHHHHHH-TTTEEEESCCCHH---HHHTS
T ss_pred             CceEEEecCCcccCCHHHHHHHHHHHHhcC-CcEEEEEcCCccccccccCcHhHHHhc-CCCEEEEeecCHH---HHhcC
Confidence            4456777787642  222555666666654 566554 4221       112332222 3478899999765   48888


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcc----cccccCCCCcceeecC-CCCHHHHHHHHHHHhhChHHHHH
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELRET  234 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~----e~~~~~~~~~~g~~~~-~~d~~~l~~~i~~ll~~~~~~~~  234 (294)
                      +++.++-+.  +..++++|++++|+|+|+.+..+-.    ..+.  +..+.|+.+. .-+.+++.++|.+++.|++ .++
T Consensus       370 ~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~--~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~-~~~  444 (482)
T 2pq6_A          370 PSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDK-GKK  444 (482)
T ss_dssp             TTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHH-HHH
T ss_pred             CCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCEEEEECCCCCHHHHHHHHHHHHcCCc-HHH
Confidence            887544443  4467899999999999998664221    1120  1345666664 2378999999999999876 356


Q ss_pred             HHHHHHHHH
Q 022615          235 MGQAARQEM  243 (294)
Q Consensus       235 ~~~~~~~~~  243 (294)
                      +++++++..
T Consensus       445 ~r~~a~~l~  453 (482)
T 2pq6_A          445 MKQKAMELK  453 (482)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666554

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.03  E-value=9.1e-05  Score=64.20  Aligned_cols=142  Identities=13%  Similarity=0.142  Sum_probs=85.1

Q ss_pred             CCCceEEEeeccccc--ccHHHHHHHHHhCCCcEEEE-EcCCcc---HHHHHhhhcCCCeEEEecccchhHHHHHhc--C
Q 022615           89 PDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAF-IGDGPY---REELEKMFTGMPAVFTGMLLGEELSQAYAS--G  160 (294)
Q Consensus        89 ~~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l~i-~G~~~~---~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~--a  160 (294)
                      ++..+++..|.....  ..+..++++++.. +.++++ +|....   .+.+.+.. ..++.+.+++++.   ++|..  +
T Consensus       270 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~---~vL~h~~~  344 (456)
T 2c1x_A          270 PTSVVYISFGTVTTPPPAEVVALSEALEAS-RVPFIWSLRDKARVHLPEGFLEKT-RGYGMVVPWAPQA---EVLAHEAV  344 (456)
T ss_dssp             TTCEEEEECCSSCCCCHHHHHHHHHHHHHH-TCCEEEECCGGGGGGSCTTHHHHH-TTTEEEESCCCHH---HHHTSTTE
T ss_pred             CcceEEEecCccccCCHHHHHHHHHHHHhc-CCeEEEEECCcchhhCCHHHHhhc-CCceEEecCCCHH---HHhcCCcC
Confidence            455667778877532  2244455555553 355544 453321   11111111 3478888999763   57884  4


Q ss_pred             CEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCC-cceeecCC--CCHHHHHHHHHHHhhChHHHH
Q 022615          161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLFNP--GDLDDCLSKLEPLLYNQELRE  233 (294)
Q Consensus       161 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~-~~g~~~~~--~d~~~l~~~i~~ll~~~~~~~  233 (294)
                      |++|.    -+..++++|++++|+|+|+.+..+    ....+   .+. +.|+.+..  -+.+++.++|.+++.+++ .+
T Consensus       345 ~~fvt----h~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l---~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~-~~  416 (456)
T 2c1x_A          345 GAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMV---EDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK-GK  416 (456)
T ss_dssp             EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH-HH
T ss_pred             CEEEe----cCCcchHHHHHHhCceEEecCChhhHHHHHHHH---HHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc-HH
Confidence            55553    234678999999999999976532    12223   233 56666543  368999999999999875 45


Q ss_pred             HHHHHHHHHH
Q 022615          234 TMGQAARQEM  243 (294)
Q Consensus       234 ~~~~~~~~~~  243 (294)
                      ++++++++..
T Consensus       417 ~~r~~a~~l~  426 (456)
T 2c1x_A          417 KLRENLRALR  426 (456)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5566655543

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=97.77  E-value=0.00082  Score=58.58  Aligned_cols=131  Identities=14%  Similarity=0.016  Sum_probs=79.5

Q ss_pred             CCCceEEEeecccc--cccHHHHHHHHHhCCCcEEEEE-cCCc--------------c-----HHHHHhhhcCCCeEEEe
Q 022615           89 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP--------------Y-----REELEKMFTGMPAVFTG  146 (294)
Q Consensus        89 ~~~~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~-G~~~--------------~-----~~~~~~~~~~~~v~~~g  146 (294)
                      ++..+.+.+|....  ...+..++++++..+ .+++++ |.+.              .     .+.+.+..+..++.+.+
T Consensus       267 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~  345 (480)
T 2vch_A          267 LGSVLYVSFGSGGTLTCEQLNELALGLADSE-QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPF  345 (480)
T ss_dssp             TTCEEEEECTTTCCCCHHHHHHHHHHHHHTT-CEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEES
T ss_pred             CCceEEEecccccCCCHHHHHHHHHHHHhcC-CcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeC
Confidence            34567777888743  233455666666654 555544 4321              0     01111122222355566


Q ss_pred             cccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCc----ccc-cccCCCCcceeecCC-----CCHH
Q 022615          147 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDI-IPEDQDGKIGYLFNP-----GDLD  216 (294)
Q Consensus       147 ~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~-~~~~~~~~~g~~~~~-----~d~~  216 (294)
                      ++|+.   ++|+.+++.++-+.  +.-++++|++++|+|+|+.+..+-    ... +   +..+.|+.+..     -+.+
T Consensus       346 w~Pq~---~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~---~~~G~g~~l~~~~~~~~~~~  417 (480)
T 2vch_A          346 WAPQA---QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS---EDIRAALRPRAGDDGLVRRE  417 (480)
T ss_dssp             CCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH---HTTCCEECCCCCTTSCCCHH
T ss_pred             ccCHH---HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHH---HHhCeEEEeecccCCccCHH
Confidence            98654   78999997555543  445789999999999999765321    112 2   23456665553     3789


Q ss_pred             HHHHHHHHHhhC
Q 022615          217 DCLSKLEPLLYN  228 (294)
Q Consensus       217 ~l~~~i~~ll~~  228 (294)
                      ++.++|.+++.+
T Consensus       418 ~l~~av~~vl~~  429 (480)
T 2vch_A          418 EVARVVKGLMEG  429 (480)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHhcC
Confidence            999999999974

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=97.73  E-value=0.0041  Score=53.94  Aligned_cols=128  Identities=13%  Similarity=0.092  Sum_probs=77.9

Q ss_pred             CCCceEEEeeccc-cc--ccHHHHHHHHHhCCCcEEEEE-cCC--ccHHHHHhhhc-CCCeEEEecccchhHHHHHhc--
Q 022615           89 PDKPLIVHVGRLG-VE--KSLDFLKRVMDRLPEARIAFI-GDG--PYREELEKMFT-GMPAVFTGMLLGEELSQAYAS--  159 (294)
Q Consensus        89 ~~~~~i~~~G~~~-~~--k~~~~l~~~~~~~~~~~l~i~-G~~--~~~~~~~~~~~-~~~v~~~g~~~~~~~~~~~~~--  159 (294)
                      ++..+++..|... ..  ..+..++++++.. +.+++++ |.+  ...+.+.+... ..++.+.+++++.   .+|..  
T Consensus       275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h~~  350 (463)
T 2acv_A          275 DKSVVFLCFGSMGVSFGPSQIREIALGLKHS-GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAHKA  350 (463)
T ss_dssp             TTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHSTT
T ss_pred             CCceEEEEeccccccCCHHHHHHHHHHHHhC-CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCCCc
Confidence            4456777788776 22  2245566666654 4565554 543  11122222220 2377888899654   46764  


Q ss_pred             CCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCc----ccc-cccCCCCcceeec-C-------CCCHHHHHHHHHHHh
Q 022615          160 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDI-IPEDQDGKIGYLF-N-------PGDLDDCLSKLEPLL  226 (294)
Q Consensus       160 ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~-~~~~~~~~~g~~~-~-------~~d~~~l~~~i~~ll  226 (294)
                      +|++|.  .  +..++++|++++|+|+|+.+..+-    ... +   +..+.|+.+ .       .-+.+++.++|.+++
T Consensus       351 ~~~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv---~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll  423 (463)
T 2acv_A          351 IGGFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLV---KEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLM  423 (463)
T ss_dssp             EEEEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH---HTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHT
T ss_pred             cCeEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHH---HHcCeEEEEecccCCCCccccHHHHHHHHHHHH
Confidence            555553  2  346789999999999999765321    122 2   345677766 2       237899999999999


Q ss_pred             h
Q 022615          227 Y  227 (294)
Q Consensus       227 ~  227 (294)
                      +
T Consensus       424 ~  424 (463)
T 2acv_A          424 D  424 (463)
T ss_dssp             C
T ss_pred             h
Confidence            6

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=97.63  E-value=0.0013  Score=54.59  Aligned_cols=96  Identities=15%  Similarity=0.172  Sum_probs=65.9

Q ss_pred             CCCceEEEeec-ccccccH--HHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCC------Ce-EEEecccchhHHHH
Q 022615           89 PDKPLIVHVGR-LGVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------PA-VFTGMLLGEELSQA  156 (294)
Q Consensus        89 ~~~~~i~~~G~-~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~------~v-~~~g~~~~~~~~~~  156 (294)
                      ++..+++..|. ..+.|.+  +.+.++++.+  .+++++++|...+.+..++.....      ++ .+.|..+-.++..+
T Consensus       179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al  258 (348)
T 1psw_A          179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL  258 (348)
T ss_dssp             SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred             CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence            34566777787 5455654  3666665544  278999998766665555554332      33 56677777999999


Q ss_pred             HhcCCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          157 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       157 ~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      ++.||++|....    |. +-.|.++|+|+|+-
T Consensus       259 i~~a~l~I~~Ds----g~-~HlAaa~g~P~v~l  286 (348)
T 1psw_A          259 IAACKAIVTNDS----GL-MHVAAALNRPLVAL  286 (348)
T ss_dssp             HHTSSEEEEESS----HH-HHHHHHTTCCEEEE
T ss_pred             HHhCCEEEecCC----HH-HHHHHHcCCCEEEE
Confidence            999999998751    33 33499999999874

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.20  E-value=0.01  Score=48.79  Aligned_cols=133  Identities=14%  Similarity=0.097  Sum_probs=79.6

Q ss_pred             CceEEEeecccccccH--HHHHHHHHhC--CCcEEEEE-cCCccHHHHHhhhcC-CCeEEEecccchhHHHHHhcCCEEE
Q 022615           91 KPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~-G~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      ..+++..|.-...|.+  +.+.++++.+  .+.++++. |...+.+..++.... .++.+.|..+-.++..+++.||++|
T Consensus       179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~I  258 (326)
T 2gt1_A          179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVV  258 (326)
T ss_dssp             SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEEE
T ss_pred             CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEEE
Confidence            4566777766666654  4777777766  36788886 533344444444432 2466778777799999999999999


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcce-----eecCCCCHHHHHHHHHHHhhC
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIG-----YLFNPGDLDDCLSKLEPLLYN  228 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g-----~~~~~~d~~~l~~~i~~ll~~  228 (294)
                      ..-.    |..-+ |.|+|+|+|+--.+..+............     -....-+++++.+++.+++.+
T Consensus       259 ~~DS----G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          259 SVDT----GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EESS----HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred             ecCC----cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence            7732    55555 77799999874222111111100011000     012223678888888877754

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=96.88  E-value=0.0065  Score=50.57  Aligned_cols=95  Identities=22%  Similarity=0.320  Sum_probs=66.2

Q ss_pred             CCceEEEeecccccccH--HHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCC---CeEEEecccchhHHHHHhcCCE
Q 022615           90 DKPLIVHVGRLGVEKSL--DFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDV  162 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~--~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~---~v~~~g~~~~~~~~~~~~~ad~  162 (294)
                      +..+++..|.-.+.|.+  +.+.++++.+  .+.+++++|...+.+..++.....   .+.+.|..+-.++..+++.||+
T Consensus       185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~  264 (349)
T 3tov_A          185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNL  264 (349)
T ss_dssp             CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSE
T ss_pred             CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCE
Confidence            44566777765555553  4555555544  267888888777766665554432   3566777777999999999999


Q ss_pred             EEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          163 FVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       163 ~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      +|..-.    |..-+ |.++|+|+|+-
T Consensus       265 ~i~~Ds----G~~Hl-Aaa~g~P~v~l  286 (349)
T 3tov_A          265 LITNDS----GPMHV-GISQGVPIVAL  286 (349)
T ss_dssp             EEEESS----HHHHH-HHTTTCCEEEE
T ss_pred             EEECCC----CHHHH-HHhcCCCEEEE
Confidence            997731    44555 89999999985

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=96.67  E-value=0.007  Score=46.71  Aligned_cols=46  Identities=7%  Similarity=0.068  Sum_probs=37.0

Q ss_pred             CeEEEecccchhHHHHHh-cCCEEEeecCCCCcchHHHHHHhcCCCEEeecCC
Q 022615          141 PAVFTGMLLGEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  192 (294)
Q Consensus       141 ~v~~~g~~~~~~~~~~~~-~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~  192 (294)
                      ++...+++  +++.++|. .||++|.=    +..++++|++++|+|.|.-+.+
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~  161 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND  161 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred             eEEEeecc--chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence            45566776  89999999 99999854    3467899999999999876553

>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*

Probab=91.10  E-value=2.1  Score=35.46  Aligned_cols=102  Identities=7%  Similarity=-0.046  Sum_probs=67.4

Q ss_pred             HHHhhhcCCCeEEEecc------cchhHHHHHhcCCEEEeecC---CCCcchHHHHHHhcCCCEEeecCCCcccccccCC
Q 022615          132 ELEKMFTGMPAVFTGML------LGEELSQAYASGDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ  202 (294)
Q Consensus       132 ~~~~~~~~~~v~~~g~~------~~~~~~~~~~~ad~~l~ps~---~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~  202 (294)
                      .++++.+...|...|..      +.++..++++...+.|..-.   .+-..-|+.+|+.+|+..|....+...++++   
T Consensus       198 ~~~~L~k~i~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~P---  274 (371)
T 2nzw_A          198 FYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFN---  274 (371)
T ss_dssp             HHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSC---
T ss_pred             HHHHHhCcCCEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCC---
Confidence            34444444456666654      22567788888888887633   2335788999999997666655555666662   


Q ss_pred             CCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          203 DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       203 ~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      .+.--.+-+..+++++++.|..+-.|++.+.+.-
T Consensus       275 p~SfI~~~dF~s~~~La~yL~~L~~n~~~Y~~y~  308 (371)
T 2nzw_A          275 PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDML  308 (371)
T ss_dssp             GGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CCceEEcccCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            1221122355689999999999999998877654

>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1

Probab=85.53  E-value=0.87  Score=34.09  Aligned_cols=70  Identities=21%  Similarity=0.321  Sum_probs=40.0

Q ss_pred             HHHHhcCCEEEeecCCCCcc--hHHHHHHhcCCCEEeecCCCc-ccccccC-------CCCcceeecCCCCHHHHHHHHH
Q 022615          154 SQAYASGDVFVMPSESETLG--LVVLEAMSSGIPVVGVRAGGI-PDIIPED-------QDGKIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       154 ~~~~~~ad~~l~ps~~e~~~--~~~~Ea~a~G~pvI~~~~~~~-~e~~~~~-------~~~~~g~~~~~~d~~~l~~~i~  223 (294)
                      .-+...||++|...-  ++|  .-+.|++..|+||++-+..++ .+.+..-       .......+.-.+|++++.+.|.
T Consensus       113 ~~m~~~sda~IvlpG--G~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~  190 (195)
T 1rcu_A          113 FVLLRNADVVVSIGG--EIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQIIE  190 (195)
T ss_dssp             HHHHTTCSEEEEESC--CHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHHH
T ss_pred             HHHHHhCCEEEEecC--CCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHHH
Confidence            356667887776432  333  337889999999999864432 2122100       1112223333458888888876


Q ss_pred             HH
Q 022615          224 PL  225 (294)
Q Consensus       224 ~l  225 (294)
                      ++
T Consensus       191 ~~  192 (195)
T 1rcu_A          191 QI  192 (195)
T ss_dssp             TC
T ss_pred             HH
Confidence            54

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=84.05  E-value=1.3  Score=35.34  Aligned_cols=98  Identities=12%  Similarity=0.077  Sum_probs=54.2

Q ss_pred             CceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccH----HHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEee
Q 022615           91 KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYR----EELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  166 (294)
Q Consensus        91 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~p  166 (294)
                      ...|+..|..+  +--..+++++...+++.|+-+-+....    ....++..   +.-.|..-.+++.+++..+|++|-.
T Consensus        21 ~irV~V~Ga~G--rMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G---~~~~gv~v~~dl~~ll~~aDVvIDF   95 (288)
T 3ijp_A           21 SMRLTVVGANG--RMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG---SDFLGVRITDDPESAFSNTEGILDF   95 (288)
T ss_dssp             CEEEEESSTTS--HHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT---CSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred             CeEEEEECCCC--HHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc---cCcCCceeeCCHHHHhcCCCEEEEc
Confidence            34555555322  223457777777787776544322110    01111111   1011222235778888899999976


Q ss_pred             cCCCCcchHHHHHHhcCCCEEeecCCC
Q 022615          167 SESETLGLVVLEAMSSGIPVVGVRAGG  193 (294)
Q Consensus       167 s~~e~~~~~~~Ea~a~G~pvI~~~~~~  193 (294)
                      +..+..-..+..++..|+|+|+...|.
T Consensus        96 T~p~a~~~~~~~~l~~Gv~vViGTTG~  122 (288)
T 3ijp_A           96 SQPQASVLYANYAAQKSLIHIIGTTGF  122 (288)
T ss_dssp             SCHHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence            654444444567889999999866654

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=83.95  E-value=1  Score=35.69  Aligned_cols=84  Identities=14%  Similarity=0.108  Sum_probs=49.6

Q ss_pred             HHHHHHHHhCCCcEEEEEcCCccH----HHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          107 DFLKRVMDRLPEARIAFIGDGPYR----EELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       107 ~~l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      ..+++++...++++++-+-+....    ....++.   .+.- |..-.+++.+++..+|+++-.+..+..-..+..++..
T Consensus        21 ~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~---g~~~-gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~   96 (272)
T 4f3y_A           21 RMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL---GKQT-GVALTDDIERVCAEADYLIDFTLPEGTLVHLDAALRH   96 (272)
T ss_dssp             HHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT---TCCC-SCBCBCCHHHHHHHCSEEEECSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh---CCCC-CceecCCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHc
Confidence            456777777777776654321110    0011111   1111 2223467888888999999877655444556678999


Q ss_pred             CCCEEeecCCCc
Q 022615          183 GIPVVGVRAGGI  194 (294)
Q Consensus       183 G~pvI~~~~~~~  194 (294)
                      |+|+|+...+..
T Consensus        97 G~~vVigTTG~s  108 (272)
T 4f3y_A           97 DVKLVIGTTGFS  108 (272)
T ss_dssp             TCEEEECCCCCC
T ss_pred             CCCEEEECCCCC
Confidence            999998766543

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}

Probab=81.93  E-value=6.7  Score=26.77  Aligned_cols=108  Identities=16%  Similarity=0.203  Sum_probs=64.1

Q ss_pred             cEEEEEcCCc-cHHHHHhhhcCCCeEEEecccchhHHHHHh----cCCEEEeecC-CCCcchHHHHHHh---cCCCEEee
Q 022615          119 ARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYA----SGDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV  189 (294)
Q Consensus       119 ~~l~i~G~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~----~ad~~l~ps~-~e~~~~~~~Ea~a---~G~pvI~~  189 (294)
                      .+++|+.+.+ ....+...+...+......-+.++....+.    ..|++++-.. .+.-|..+++.+.   ..+|||.-
T Consensus         4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l   83 (143)
T 3jte_A            4 AKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIIL   83 (143)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence            4666776543 234455555444443333334466666665    5688877544 3334555555543   36777653


Q ss_pred             -cCCCc---ccccccCCCCcceeecCCCCHHHHHHHHHHHhhCh
Q 022615          190 -RAGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  229 (294)
Q Consensus       190 -~~~~~---~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~  229 (294)
                       .....   .+.+   +.|..+++..+.+.+++..+|..++...
T Consensus        84 s~~~~~~~~~~~~---~~g~~~~l~kp~~~~~l~~~l~~~~~~~  124 (143)
T 3jte_A           84 TGHGDLDNAILAM---KEGAFEYLRKPVTAQDLSIAINNAINRK  124 (143)
T ss_dssp             ECTTCHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---HhCcceeEeCCCCHHHHHHHHHHHHHHH
Confidence             33322   2333   5677889999999999999999887643

>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}

Probab=81.42  E-value=9.7  Score=25.47  Aligned_cols=106  Identities=20%  Similarity=0.146  Sum_probs=60.4

Q ss_pred             cEEEEEcCCcc-HHHHHhhhcCCCeEEEecccchhHHHHHhc--CCEEEeecC-CCCcchHHHHHHhc-----CCCEEee
Q 022615          119 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVGV  189 (294)
Q Consensus       119 ~~l~i~G~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~--ad~~l~ps~-~e~~~~~~~Ea~a~-----G~pvI~~  189 (294)
                      .+++|+.+.+. ...+..... .+..+...-+.++..+.+..  .|++++-.. .+.-|..+++.+..     ++|||.-
T Consensus         5 ~~ilivdd~~~~~~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~   83 (133)
T 3nhm_A            5 PKVLIVENSWTMRETLRLLLS-GEFDCTTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFV   83 (133)
T ss_dssp             CEEEEECSCHHHHHHHHHHHT-TTSEEEEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHh-CCcEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEE
Confidence            45666665432 233444443 33333333333555555543  577776543 33445566666543     6787653


Q ss_pred             cC-CC--cccccccCCCCcceeecCCCCHHHHHHHHHHHhhC
Q 022615          190 RA-GG--IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  228 (294)
Q Consensus       190 ~~-~~--~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~  228 (294)
                      .. ..  ..+.+   ..|..+++..|.+.+++.+.|..++..
T Consensus        84 s~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~~  122 (133)
T 3nhm_A           84 SGYAPRTEGPAD---QPVPDAYLVKPVKPPVLIAQLHALLAR  122 (133)
T ss_dssp             ESCCC-----TT---SCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred             eCCCcHhHHHHh---hcCCceEEeccCCHHHHHHHHHHHHhh
Confidence            22 21  12233   567788999999999999999998764

>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}

Probab=81.21  E-value=7.7  Score=27.17  Aligned_cols=74  Identities=19%  Similarity=0.315  Sum_probs=45.3

Q ss_pred             hhHHHHHh----cCCEEEeecCC-CCcchHHHHHH---hcCCCEEeecC-CCc---ccccccCCCCcceeecCCCCHHHH
Q 022615          151 EELSQAYA----SGDVFVMPSES-ETLGLVVLEAM---SSGIPVVGVRA-GGI---PDIIPEDQDGKIGYLFNPGDLDDC  218 (294)
Q Consensus       151 ~~~~~~~~----~ad~~l~ps~~-e~~~~~~~Ea~---a~G~pvI~~~~-~~~---~e~~~~~~~~~~g~~~~~~d~~~l  218 (294)
                      ++..+.+.    ..|++++-... +.-|..+++.+   ...+|||.... ...   .+.+   +.|..+++..+.+.+++
T Consensus        71 ~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l  147 (157)
T 3hzh_A           71 EEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCL---IKGAKTFIVKPLDRAKV  147 (157)
T ss_dssp             HHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHH---HTTCSEEEESSCCHHHH
T ss_pred             HHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHH---HcCCCEEEeCCCCHHHH
Confidence            44444443    34887775442 33455555554   34677765432 222   2233   55778899999999999


Q ss_pred             HHHHHHHhh
Q 022615          219 LSKLEPLLY  227 (294)
Q Consensus       219 ~~~i~~ll~  227 (294)
                      .+.|..++.
T Consensus       148 ~~~i~~~l~  156 (157)
T 3hzh_A          148 LQRVMSVFV  156 (157)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHHhc
Confidence            999988764

>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}

Probab=80.68  E-value=12  Score=25.91  Aligned_cols=108  Identities=13%  Similarity=0.138  Sum_probs=61.7

Q ss_pred             cEEEEEcCCcc-HHHHHhhhcCCCeEEEecccchhHHHHHhc---CCEEEeecC-CCCcchHHHHHHh---cCCCEEee-
Q 022615          119 ARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV-  189 (294)
Q Consensus       119 ~~l~i~G~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~---ad~~l~ps~-~e~~~~~~~Ea~a---~G~pvI~~-  189 (294)
                      .+++|+.+.+. ...+...+.. +..+...-+.++....+..   .|++++-.. .+.-|..+++.+.   ...|+|.- 
T Consensus         5 ~~ILivdd~~~~~~~l~~~L~~-~~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s   83 (151)
T 3kcn_A            5 ERILLVDDDYSLLNTLKRNLSF-DFEVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLT   83 (151)
T ss_dssp             CEEEEECSCHHHHHHHHHHHTT-TSEEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEE
T ss_pred             CeEEEEeCCHHHHHHHHHHhcc-CceEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEE
Confidence            46677765543 3344444433 4443333344666666543   388877544 3344555555543   46776653 


Q ss_pred             cCCC---cccccccCCCC-cceeecCCCCHHHHHHHHHHHhhChH
Q 022615          190 RAGG---IPDIIPEDQDG-KIGYLFNPGDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       190 ~~~~---~~e~~~~~~~~-~~g~~~~~~d~~~l~~~i~~ll~~~~  230 (294)
                      ....   ..+.+   ..+ ..+++..|.+.+++..+|..++....
T Consensus        84 ~~~~~~~~~~~~---~~g~~~~~l~KP~~~~~L~~~i~~~l~~~~  125 (151)
T 3kcn_A           84 GNQDLTTAMEAV---NEGQVFRFLNKPCQMSDIKAAINAGIKQYD  125 (151)
T ss_dssp             CGGGHHHHHHHH---HHTCCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHH---HcCCeeEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            3222   12223   345 56889999999999999999876543

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}

Probab=80.05  E-value=12  Score=25.50  Aligned_cols=108  Identities=19%  Similarity=0.222  Sum_probs=64.7

Q ss_pred             CcEEEEEcCCc-cHHHHHhhhcCCCeEEEecccchhHHHHHhc---CCEEEeecCC-C-CcchHHHHHHh--cCCCEEee
Q 022615          118 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSES-E-TLGLVVLEAMS--SGIPVVGV  189 (294)
Q Consensus       118 ~~~l~i~G~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~---ad~~l~ps~~-e-~~~~~~~Ea~a--~G~pvI~~  189 (294)
                      ..+++|+.+.+ ....+...+...++.....-+.++....+..   .|++++-... + .-|..+++.+.  .++|+|.-
T Consensus         5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~l   84 (140)
T 3h5i_A            5 DKKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFL   84 (140)
T ss_dssp             -CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEE
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEE
Confidence            35667776543 2344445554445444444444666666643   5888875543 3 34555555544  46787653


Q ss_pred             -cCCC---cccccccCCCCcceeecCCCCHHHHHHHHHHHhhC
Q 022615          190 -RAGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  228 (294)
Q Consensus       190 -~~~~---~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~  228 (294)
                       ....   ..+.+   ..|..+++..|.+.+++...|..++..
T Consensus        85 s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~~  124 (140)
T 3h5i_A           85 TAHTEPAVVEKIR---SVTAYGYVMKSATEQVLITIVEMALRL  124 (140)
T ss_dssp             ESSSSCCCCGGGG---GSCEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---hCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence             2222   22334   567889999999999999999888753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	294
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	5e-22
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	4e-18
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	5e-18
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	9e-10
d2bfwa1	196	c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py	1e-07

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 93.2 bits (230), Expect = 5e-22
 Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 36/246 (14%)

Query: 45  GKDLEAARVTAANKIRIWKKGVDSESFHPR------------------FRSSEMRWRLSN 86
           G  LE    + A+ +     G+D++ ++P                        +      
Sbjct: 227 GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI 286

Query: 87  GEPDKPLIVHVGR----LGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPA 142
            +   PL   + R     G++   + +  ++       +   GD      L    +    
Sbjct: 287 DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHG 346

Query: 143 VFTGMLLGEELSQA--YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 200
                +   E       A  D  ++PS  E  GL  L A+  G   V  R GG+ D + +
Sbjct: 347 RVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVID 406

Query: 201 DQDGKI------GYLFNPGD---LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW-RA 250
                +      G  F+P     L   + +     ++ +L   M +   +      W ++
Sbjct: 407 ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKS 464

Query: 251 ATRTIR 256
           A     
Sbjct: 465 AGLYAA 470

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 81.9 bits (201), Expect = 4e-18
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 42/233 (18%)

Query: 58  KIRIWKKGVDSESFHPRFRSSEMRW--RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR 115
           +  ++  G++ +    +          +L     +   I  V RL   K L       + 
Sbjct: 219 RTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEA 278

Query: 116 LPE------ARIAFIGDGP-----------YREELEKMFTGMPAVF-----------TGM 147
           L E       +I +    P            R +LE     +   +              
Sbjct: 279 LLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQH 338

Query: 148 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP-----VVGVRAGGIPDIIPEDQ 202
              + L + +   DV ++    + + LV  E +++  P     +V  +  G  + +    
Sbjct: 339 FDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS-- 396

Query: 203 DGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRT 254
                 + NP D D+  + L+  L  +   R +        + K D       
Sbjct: 397 ----ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 81.4 bits (199), Expect = 5e-18
 Identities = 58/287 (20%), Positives = 95/287 (33%), Gaps = 28/287 (9%)

Query: 1   MSYHTHVPVYIPRYTFSWLVKPMWL------VIKFLHRAADLTLVPSVAIGKDLEAARVT 54
            + H      +P + F                       AD+    S     D       
Sbjct: 148 FTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRN 207

Query: 55  AANKIRIWKKGVDSESFHPRFRSSEMRWRLSN-----GEPDKPLIVHVGRLGV-EKSLDF 108
              KI     G+D   ++  + +     R  +     G  +    + +GR    +K +D 
Sbjct: 208 FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDV 267

Query: 109 LKRVMDRL------PEARIAFIGDGPYREELEKM----FTGMPAVFTGMLLGEELSQAYA 158
           L + ++ L       E R   IG G    E          G   V T ML  E + + Y 
Sbjct: 268 LLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 327

Query: 159 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC 218
           S D  ++PS  E  GLV LEAM  G   +    GG+ DII      + G L   GD  + 
Sbjct: 328 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII----TNETGILVKAGDPGEL 383

Query: 219 LSKLEPLL-YNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 264
            + +   L  ++       +  ++    + W  +      + Y  +I
Sbjct: 384 ANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSI 429

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 56.5 bits (134), Expect = 9e-10
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 180 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 239
           +++G+PV+     G    I +   G +  +  P   +     L   L    LR    + A
Sbjct: 290 ITAGLPVLTTAVCGYAHYIADANCGTV--IAEPFSQEQLNEVLRKALTQSPLRMAWAENA 347

Query: 240 RQEMEKYDWRAATRTIRN 257
           R   +  D  +      +
Sbjct: 348 RHYADTQDLYSLPEKAAD 365

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 49.0 bits (115), Expect = 1e-07
 Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 21/199 (10%)

Query: 65  GVDSESFHPRFRSSEMRWRLSN-----GEPDKPLIVHVGRLGV-EKSLDFLKRVMDR--- 115
           G+D   ++  + +     R  +     G  +    + +GR    +K +D L + ++    
Sbjct: 1   GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60

Query: 116 ---LPEARIAFIGDGPYREELEKMFTGMP----AVFTGMLLGEELSQAYASGDVFVMPSE 168
                E R   IG G    E              V T ML  E + + Y S D  ++PS 
Sbjct: 61  KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY 120

Query: 169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-Y 227
            E  GLV LEAM  G   +    GG+ DI       + G L   GD  +  + +   L  
Sbjct: 121 FEPFGLVALEAMCLGAIPIASAVGGLRDI----ITNETGILVKAGDPGELANAILKALEL 176

Query: 228 NQELRETMGQAARQEMEKY 246
           ++       +  ++    +
Sbjct: 177 SRSDLSKFRENCKKRAMSF 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	294
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	99.98
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.98
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.95
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.94
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.9
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	98.61
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	98.58
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	98.33
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	98.25
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	98.22
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	98.17
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	98.13
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	97.92
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	97.9
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	97.78
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	97.25
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	97.24
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	97.16
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	97.12
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	96.57
d2nzwa1	349	Alpha1,3-fucosyltransferase FucT {Helicobacter pyl	93.07
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	92.31
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	89.27
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	85.68
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	83.89

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-32  Score=229.28  Aligned_cols=219  Identities=19%  Similarity=0.245  Sum_probs=179.2

Q ss_pred             hCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCcc--chHHHHHhhcCCCCCceEEEeecccccccHHHHH
Q 022615           33 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR--SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK  110 (294)
Q Consensus        33 ~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~  110 (294)
                      .++.+++.++.....+.+.++.+.+++.++|||+|.+.+.+...  ............++.++++++|++.+.||++.++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li  214 (370)
T d2iw1a1         135 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSI  214 (370)
T ss_dssp             CCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHH
T ss_pred             cCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhhc
Confidence            47899999999999998888888899999999999876543322  2222223333355778999999999999999999


Q ss_pred             HHHHhCC----CcEEEEEcCCccHHHHHhhhc----CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhc
Q 022615          111 RVMDRLP----EARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  182 (294)
Q Consensus       111 ~~~~~~~----~~~l~i~G~~~~~~~~~~~~~----~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~  182 (294)
                      +++..+.    +..+.++|.+...+.++++++    ..++.+.|+.  +++.++|+.||++++||..|++|++++|||+|
T Consensus       215 ~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~  292 (370)
T d2iw1a1         215 EALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITA  292 (370)
T ss_dssp             HHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH
T ss_pred             ccccccccccccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccccccccceeeecccC
Confidence            9998873    467777766555555555544    3368888876  78999999999999999999999999999999


Q ss_pred             CCCEEeecCCCcccccccCCCCcceeec-CCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 022615          183 GIPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       183 G~pvI~~~~~~~~e~~~~~~~~~~g~~~-~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      |+|||+++.++..|++   .++.+|+++ ++.|+++++++|.++++|++.+++|++++++.+++|+|..+.+++.
T Consensus       293 G~PvI~s~~~g~~e~i---~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~  364 (370)
T d2iw1a1         293 GLPVLTTAVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA  364 (370)
T ss_dssp             TCCEEEETTSTTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred             CeeEEEeCCCChHHHh---cCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhChhHHHHHHH
Confidence            9999999999999999   778888654 6789999999999999999999999999999997776655555555

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.98  E-value=1.1e-31  Score=233.69  Aligned_cols=233  Identities=20%  Similarity=0.253  Sum_probs=186.5

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHh---------ccCCcCceEEeeccccCCCCCCCccc------------------h
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAA---------RVTAANKIRIWKKGVDSESFHPRFRS------------------S   78 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~---------~~~~~~~i~~i~~gvd~~~~~~~~~~------------------~   78 (294)
                      +++.....+|.++++|...++.....         ......++.+|+||+|.+.|+|....                  .
T Consensus       199 ~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~  278 (477)
T d1rzua_         199 FLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK  278 (477)
T ss_dssp             HHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred             HHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHH
Confidence            56778889999999998876654321         11234689999999999888763221                  1


Q ss_pred             HHHHHhhcCCCCCceEEEeecccccccHHHHHHHHHhC--CCcEEEEEcCCccHHH--HHhhhc--CCCeEEEecccchh
Q 022615           79 EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYREE--LEKMFT--GMPAVFTGMLLGEE  152 (294)
Q Consensus        79 ~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~--~~~~l~i~G~~~~~~~--~~~~~~--~~~v~~~g~~~~~~  152 (294)
                      ..+.......++.++|+|+|++.+.||++.|++++..+  .+.+++++|.|+....  +.+...  ..++.+.+..+.++
T Consensus       279 ~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  358 (477)
T d1rzua_         279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPL  358 (477)
T ss_dssp             HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHH
T ss_pred             HHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhH
Confidence            12233333445678899999999999999999999775  4789999998864332  222222  34799999998899


Q ss_pred             HHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCC---------cceeecCCCCHHHHHHHHH
Q 022615          153 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLE  223 (294)
Q Consensus       153 ~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~---------~~g~~~~~~d~~~l~~~i~  223 (294)
                      ...+|+.||++++||.+|+||++++|||+||+|||+|+.|++.|++   .++         .+|+++++.|+++++++|.
T Consensus       359 ~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v---~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~  435 (477)
T d1rzua_         359 SHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTV---IDANHAALASKAATGVQFSPVTLDGLKQAIR  435 (477)
T ss_dssp             HHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHHHH
T ss_pred             HHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCccee---ecCCccccccCCCceEEeCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999   555         4899999999999999998


Q ss_pred             HHhh---ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 022615          224 PLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  264 (294)
Q Consensus       224 ~ll~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~  264 (294)
                      ++++   |++.++++++++.+  ++|||+.+++++. .+|++++
T Consensus       436 ~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~-~lY~~ll  476 (477)
T d1rzua_         436 RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA-ALYSQLI  476 (477)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH-HHHHHHT
T ss_pred             HHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHH-HHHHHHh
Confidence            8775   88888888877742  4699999999998 7999886

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.98  E-value=1.4e-31  Score=230.37  Aligned_cols=236  Identities=22%  Similarity=0.264  Sum_probs=193.2

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccccCCCCCCCccch-----HHHHHhhcCCCCCceEEEeec
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-----EMRWRLSNGEPDKPLIVHVGR   99 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~G~   99 (294)
                      ..++.....+|.+++.+..........++....++.++|||+|.+.+.+.....     ...........++++++|+|+
T Consensus       178 ~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~  257 (437)
T d2bisa1         178 DPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGR  257 (437)
T ss_dssp             CHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESC
T ss_pred             HHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeec
Confidence            456778889999999999888777776666778999999999998886532211     111122234456788999999


Q ss_pred             cc-ccccHHHHHHHHHhC------CCcEEEEEcCCccHH--HHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecC
Q 022615          100 LG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYRE--ELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus       100 ~~-~~k~~~~l~~~~~~~------~~~~l~i~G~~~~~~--~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      +. +.||++.+++++..+      ++++|+++|.|+...  .++.+...  .++.+.|.++.+++..+++.||++++||.
T Consensus       258 ~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~  337 (437)
T d2bisa1         258 FDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY  337 (437)
T ss_dssp             BCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEECCS
T ss_pred             ccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhcccccccc
Confidence            96 479999999998654      579999999886432  22333222  24677888899999999999999999999


Q ss_pred             CCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHhCC
Q 022615          169 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s  247 (294)
                      .|++|++++|||+||+|||+++.++..|++   ++ .+|+++++.|+++++++|.++++ +++.++++++++++.+++||
T Consensus       338 ~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i---~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s  413 (437)
T d2bisa1         338 FEPFGLVALEAMCLGAIPIASAVGGLRDII---TN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  413 (437)
T ss_dssp             CCSSCHHHHHHHTTTCEEEEESCTTHHHHC---CT-TTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSC
T ss_pred             ccccchHHHHHHHCCCCEEEeCCCCcHHhE---EC-CcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999988   54 58999999999999999999886 67789999999999988899


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 022615          248 WRAATRTIRNEQYNAAIW  265 (294)
Q Consensus       248 ~~~~~~~~~~~l~~~~~~  265 (294)
                      |++++++++ .+|+.+++
T Consensus       414 ~~~~a~~~~-~iY~~~i~  430 (437)
T d2bisa1         414 WEKSAERYV-KAYTGSID  430 (437)
T ss_dssp             HHHHHHHHH-HHHHTCSC
T ss_pred             HHHHHHHHH-HHHHHHHH
Confidence            999999999 79998764

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.95  E-value=5.4e-28  Score=185.46  Aligned_cols=179  Identities=24%  Similarity=0.356  Sum_probs=143.8

Q ss_pred             cccCCCCCCCccc-----hHHHHHhhcCCCCCceEEEeeccc-ccccHHHHHHHHHhC------CCcEEEEEcCCccH--
Q 022615           65 GVDSESFHPRFRS-----SEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYR--  130 (294)
Q Consensus        65 gvd~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~G~~~-~~k~~~~l~~~~~~~------~~~~l~i~G~~~~~--  130 (294)
                      |||.+.|.+....     ...........++.++|+|+|++. ++||++.++++++.+      ++++|+|+|.|+..  
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~   80 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELE   80 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHH
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchh
Confidence            7888888664221     111112233456788899999996 589999999999754      57999999987532  


Q ss_pred             HHHHhhhcC--CCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCccee
Q 022615          131 EELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY  208 (294)
Q Consensus       131 ~~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~  208 (294)
                      ...+.+...  ..+.+.|.++.+++..+|+.||++++|+..|++|.+++|||+||+|||+++.++..+++   . +.+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i---~-~~~g~  156 (196)
T d2bfwa1          81 GWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII---T-NETGI  156 (196)
T ss_dssp             HHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC---C-TTTCE
T ss_pred             hhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCccceee---c-CCcee
Confidence            222222222  23567888889999999999999999999999999999999999999999999999988   3 46899


Q ss_pred             ecCCCCHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHhCC
Q 022615          209 LFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  247 (294)
Q Consensus       209 ~~~~~d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s  247 (294)
                      ++++.|+++++++|.+++. +++.++++++++++.+++||
T Consensus       157 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs  196 (196)
T d2bfwa1         157 LVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  196 (196)
T ss_dssp             EECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             eECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999887 78899999999999988886

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=1.1e-26  Score=173.19  Aligned_cols=136  Identities=25%  Similarity=0.433  Sum_probs=119.8

Q ss_pred             ceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCcc---HHHHHhhhc---CCCeEEEecccchhHHHHHhcCCEEEe
Q 022615           92 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPY---REELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVM  165 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~---~~~~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad~~l~  165 (294)
                      ..++|+|++.+.||++.++++++.+++.+++|+|.+..   .+.+.+.+.   ..+|+++|+++.+++.++|+.||++++
T Consensus        13 ~~~l~iGrl~~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~   92 (166)
T d2f9fa1          13 DFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC   92 (166)
T ss_dssp             SCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEecCccccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccc
Confidence            45789999999999999999999999999999996543   333332222   348999999999999999999999999


Q ss_pred             ecCCCCcchHHHHHHhcCCCEEeecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHH
Q 022615          166 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  231 (294)
Q Consensus       166 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~  231 (294)
                      ||..|++|.+++|||++|+|||+++.++..+++   .++.+|++++. |+++++++|..++++++.
T Consensus        93 ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i---~~~~~g~~~~~-d~~~~~~~i~~l~~~~~~  154 (166)
T d2f9fa1          93 TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPDK  154 (166)
T ss_dssp             CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEECS-CHHHHHHHHHHHHHCTTT
T ss_pred             ccccccccccccccccccccceeecCCcceeee---cCCcccccCCC-CHHHHHHHHHHHHhCHHH
Confidence            999999999999999999999999999999999   78899997764 899999999999998763

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=5.8e-23  Score=176.14  Aligned_cols=224  Identities=16%  Similarity=0.106  Sum_probs=170.4

Q ss_pred             HHHhCCeEEecchhhHHHHHHhc----c------------CCcCceEEeeccccCCCCCCCccc--hHHHHHhhcCCCCC
Q 022615           30 LHRAADLTLVPSVAIGKDLEAAR----V------------TAANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDK   91 (294)
Q Consensus        30 ~~~~ad~ii~~s~~~~~~~~~~~----~------------~~~~~i~~i~~gvd~~~~~~~~~~--~~~~~~~~~~~~~~   91 (294)
                      .+-.+|.|...+......+....    +            ....++.++|+|+|++.+......  .....+......++
T Consensus       175 ~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~~~~  254 (456)
T d1uqta_         175 QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNV  254 (456)
T ss_dssp             HHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTC
T ss_pred             HhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhcCCC
Confidence            34478999999887777665421    1            112367889999998766432111  11111222223577


Q ss_pred             ceEEEeecccccccHHHHHHHHHhC----C----CcEEEEEcCCcc---------HHHHHhhhc-----------CCCeE
Q 022615           92 PLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGPY---------REELEKMFT-----------GMPAV  143 (294)
Q Consensus        92 ~~i~~~G~~~~~k~~~~l~~~~~~~----~----~~~l~i~G~~~~---------~~~~~~~~~-----------~~~v~  143 (294)
                      ++|+++|++.+.||++.+++|++++    |    ++.++.+|.++.         ...+.++..           ...+.
T Consensus       255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~  334 (456)
T d1uqta_         255 QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY  334 (456)
T ss_dssp             EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred             eEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceee
Confidence            8999999999999999999998765    4    366777765431         112222211           11367


Q ss_pred             EEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCC-----EEeecCCCcccccccCCCCcceeecCCCCHHHH
Q 022615          144 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP-----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  218 (294)
Q Consensus       144 ~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~p-----vI~~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l  218 (294)
                      +.+.++.+++..+|+.||+++.||..||||++++|||+||+|     +|+|+.+|..+.+   .   .|++++|.|++++
T Consensus       335 ~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l---~---~g~lVnP~d~~~~  408 (456)
T d1uqta_         335 LNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEV  408 (456)
T ss_dssp             ECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---T---TSEEECTTCHHHH
T ss_pred             ccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh---C---CeEEECcCCHHHH
Confidence            889999999999999999999999999999999999999999     8999999999988   3   3899999999999


Q ss_pred             HHHHHHHhh-ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 022615          219 LSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQ  259 (294)
Q Consensus       219 ~~~i~~ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~l  259 (294)
                      +++|.++++ ++++++++.+++++.+.+|++...++.+++.+
T Consensus       409 A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l  450 (456)
T d1uqta_         409 AAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDL  450 (456)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence            999999998 56788899999999999999999999888555

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=98.61  E-value=3.9e-07  Score=74.88  Aligned_cols=195  Identities=17%  Similarity=0.097  Sum_probs=126.9

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeeccc-cCCCCCCCccchHHHHH-hhcCCCCCceEEEeecccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWR-LSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~gv-d~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~G~~~~  102 (294)
                      .....+-+.+|..++.++..++.+.+.+ .++.+|.++.+.. |.  +.    ......+ ......+.++++..-+...
T Consensus       135 ~~R~~iskls~~hf~~t~~~~~~L~~~G-e~~~~I~~vG~p~~D~--i~----~~~~~~~~~~~~~~~~~~lvt~hr~~n  207 (373)
T d1v4va_         135 ANRRLTDVLTDLDFAPTPLAKANLLKEG-KREEGILVTGQTGVDA--VL----LAAKLGRLPEGLPEGPYVTVTMHRREN  207 (373)
T ss_dssp             HHHHHHHHHCSEEEESSHHHHHHHHTTT-CCGGGEEECCCHHHHH--HH----HHHHHCCCCTTCCSSCEEEECCCCGGG
T ss_pred             hhhhhhccccceeeecchhhhhhhhhhc-ccccceeecccchhhH--HH----hhhhhcccccccccccceeEEeccccc
Confidence            4445556689999999999999999865 6678999888642 21  10    0000000 1112334555666665544


Q ss_pred             cccHHHHHHHHH----hCCCcEEEEEcCCcc--HHHHHhh-hcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchH
Q 022615          103 EKSLDFLKRVMD----RLPEARIAFIGDGPY--REELEKM-FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV  175 (294)
Q Consensus       103 ~k~~~~l~~~~~----~~~~~~l~i~G~~~~--~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~  175 (294)
                      .+....+.+++.    ..+++.+++......  .....+. ....++.++..+++.++..+++.|++++--|     |.-
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssg  282 (373)
T d1v4va_         208 WPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGL  282 (373)
T ss_dssp             GGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHH
T ss_pred             cchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc-----chh
Confidence            444444444443    335666665543221  1222222 2345799999999999999999999998665     677


Q ss_pred             HHHHHhcCCCEEee-cCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          176 VLEAMSSGIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       176 ~~Ea~a~G~pvI~~-~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      +.||.++|+|+|.- +.+.-++-+   +.+.+- ++ ..|.+++.+++..++.+++.+..+.
T Consensus       283 i~Ea~~lg~P~Inir~~~eRqeg~---~~g~nv-lv-~~d~~~I~~~i~~~l~~~~~~~~~~  339 (373)
T d1v4va_         283 QEEGAALGVPVVVLRNVTERPEGL---KAGILK-LA-GTDPEGVYRVVKGLLENPEELSRMR  339 (373)
T ss_dssp             HHHHHHTTCCEEECSSSCSCHHHH---HHTSEE-EC-CSCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             hhcchhhcCcEEEeCCCccCHHHH---hcCeeE-Ec-CCCHHHHHHHHHHHHcCHHHHhhcc
Confidence            88999999999987 446666656   444443 33 3489999999999999887665543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=9.9e-08  Score=77.65  Aligned_cols=156  Identities=17%  Similarity=0.120  Sum_probs=97.3

Q ss_pred             CCceE-EEeecccccccHHHHHHHHHhCCCcEE-EEEcCCcc-HHHHHh--hhcCCCeEEEecccchhHHHHHhcCCEEE
Q 022615           90 DKPLI-VHVGRLGVEKSLDFLKRVMDRLPEARI-AFIGDGPY-REELEK--MFTGMPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        90 ~~~~i-~~~G~~~~~k~~~~l~~~~~~~~~~~l-~i~G~~~~-~~~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      +...+ ++.|..+...-.+.+.+.+..+..... ++.+.... ......  .....++...++.  +++.++|+.||++|
T Consensus       176 ~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~--~~~~~lm~~adl~I  253 (351)
T d1f0ka_         176 GPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVV  253 (351)
T ss_dssp             SSEEEEEECTTTCCHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEE
T ss_pred             CCcccccccccchhhhhHHHHHHhhhhhcccceeeeeccccchhhhhhhhcccccccceeeeeh--hhHHHHHHhCchhh
Confidence            34444 444555444444566666666654333 33333322 222222  2234468888988  88999999999998


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCCC-------cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHH
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAGG-------IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~-------~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      .-.    .++++.|++++|+|+|+.+...       ..+.+   ++.+.|+.++..  +.+.+.+.|..+  +++...+|
T Consensus       254 t~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l---~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~  324 (351)
T d1f0ka_         254 CRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL---EKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTM  324 (351)
T ss_dssp             ECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH---HHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHH
T ss_pred             ccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHH---HHCCCEEEechhhCCHHHHHHHHHhh--CHHHHHHH
Confidence            643    3588999999999999865432       12334   445567666533  467787877775  66777888


Q ss_pred             HHHHHHHHHhCCHHHHHHHHH
Q 022615          236 GQAARQEMEKYDWRAATRTIR  256 (294)
Q Consensus       236 ~~~~~~~~~~~s~~~~~~~~~  256 (294)
                      ++++++......++.+++.+.
T Consensus       325 ~~~~~~~~~~~~a~~i~~~i~  345 (351)
T d1f0ka_         325 AERARAASIPDATERVANEVS  345 (351)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHH
T ss_pred             HHHHHccCCccHHHHHHHHHH
Confidence            888887654455666666655

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=98.33  E-value=3.5e-06  Score=69.19  Aligned_cols=197  Identities=19%  Similarity=0.168  Sum_probs=116.4

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCCC-CCCCccchHHHHHhhcCCCCCceEEEeecccc
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSES-FHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  102 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~  102 (294)
                      .....+-+.+|..++.++..++.+.+.+ .++++|.++.+. +|.-. .........   .......+..+++..-+...
T Consensus       135 ~~R~~iskls~~hf~~t~~~~~~L~~~G-~~~~~I~~vG~~~~D~i~~~~~~~~~~~---~~~~~~~~~~ilvt~Hr~~~  210 (377)
T d1o6ca_         135 LNRQMTGAIADLHFAPTGQAKDNLLKEN-KKADSIFVTGNTAIDALNTTVRDGYSHP---VLDQVGEDKMILLTAHRREN  210 (377)
T ss_dssp             HHHHHHHHHCSEEEESSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHCCSSCCCS---TTTTTTTSEEEEECC-----
T ss_pred             hhccccccceeEEeecchhhhhhhhhhc-cccceEeeccchhHHHHHHHHHHHHhhh---hhhhccCCceEEEEeccccc
Confidence            3444555789999999999999999965 567899999875 33110 000000000   00111223344444443322


Q ss_pred             c-----ccHHHHHHHHHhCCCcEEEEEcCCcc--HHHHHh-hhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcch
Q 022615          103 E-----KSLDFLKRVMDRLPEARIAFIGDGPY--REELEK-MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  174 (294)
Q Consensus       103 ~-----k~~~~l~~~~~~~~~~~l~i~G~~~~--~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~  174 (294)
                      .     ..+..++.++...++..+++......  .....+ .....|+.+...+++.++..+++.|++++--|     |.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----ss  285 (377)
T d1o6ca_         211 LGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----GG  285 (377)
T ss_dssp             -----HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC-------C
T ss_pred             cccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-----ch
Confidence            1     12334555556666666655433221  222222 23345799999999999999999999998555     55


Q ss_pred             HHHHHHhcCCCEEeecC-CCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHHHHH
Q 022615          175 VVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       175 ~~~Ea~a~G~pvI~~~~-~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      -+.||-.+|+|+|.-.. +.-++.+   +.+.+ +++. .|.+++.+++..++.++..++.+
T Consensus       286 ~i~Ea~~lg~P~Inir~~tERqe~~---~~g~n-ilv~-~~~~~I~~~i~~~l~~~~~~~~~  342 (377)
T d1o6ca_         286 VQEEAPSLGKPVLVLRDTTERPEGV---EAGTL-KLAG-TDEENIYQLAKQLLTDPDEYKKM  342 (377)
T ss_dssp             HHHHGGGGTCCEEEECSCCC---CT---TTTSS-EEEC-SCHHHHHHHHHHHHHCHHHHHHH
T ss_pred             hHHhhhhhhceEEEeCCCCcCcchh---hcCee-EECC-CCHHHHHHHHHHHHhChHHHhhh
Confidence            68899999999997633 4455555   44544 3444 38899999999999887765544

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.25  E-value=1.9e-06  Score=70.89  Aligned_cols=124  Identities=11%  Similarity=0.050  Sum_probs=81.2

Q ss_pred             CceEEEeecc-cccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615           91 KPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus        91 ~~~i~~~G~~-~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      ..+++..|.. ...+..+.++++++..+...++..|....    .......|+.+.+++++   .++|..+|++|.    
T Consensus       239 ~~i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~----~~~~~~~nv~~~~~~p~---~~~l~~~~~~V~----  307 (401)
T d1iira_         239 PPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADL----VLPDDGADCFAIGEVNH---QVLFGRVAAVIH----  307 (401)
T ss_dssp             CCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTC----CCSSCGGGEEECSSCCH---HHHGGGSSEEEE----
T ss_pred             CeEEEccCccccchHHHHHHHHHHHHcCCeEEEeccCCcc----ccccCCCCEEEEeccCH---HHHHhhcCEEEe----
Confidence            3444455544 33455677888888876544444443221    01111237999999864   466888999983    


Q ss_pred             CCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhC
Q 022615          170 ETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYN  228 (294)
Q Consensus       170 e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~  228 (294)
                      .|..+++.|++++|+|+|+.+..+    ....+   +..+.|+.++..  ++++++++|.+++++
T Consensus       308 hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l---~~~G~g~~l~~~~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATALTP  369 (401)
T ss_dssp             CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred             cCCchHHHHHHHhCCCEEEccccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            466789999999999999865433    33344   445667776654  689999999999953

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.22  E-value=2.6e-06  Score=70.14  Aligned_cols=125  Identities=10%  Similarity=0.002  Sum_probs=81.5

Q ss_pred             CceEEEeeccccc---ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeec
Q 022615           91 KPLIVHVGRLGVE---KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  167 (294)
Q Consensus        91 ~~~i~~~G~~~~~---k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps  167 (294)
                      ..+++..|.....   .-...+++++...+...++..|.....    ......|+.+.+++|+   .+++..+|++|.  
T Consensus       238 ~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~p~---~~ll~~~~~~I~--  308 (401)
T d1rrva_         238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV----LPDDRDDCFAIDEVNF---QALFRRVAAVIH--  308 (401)
T ss_dssp             CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC----CSCCCTTEEEESSCCH---HHHGGGSSEEEE--
T ss_pred             CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEeccccccc----cccCCCCEEEEeccCc---HHHhhhccEEEe--
Confidence            3455666665332   223445566666665555554432210    0111347999999964   456788999984  


Q ss_pred             CCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChH
Q 022615          168 ESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       168 ~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~  230 (294)
                        .|..+++.||+++|+|+|+.+..+    ..+.+   +..+.|+..+..  +++++.++|.++++ ++
T Consensus       309 --hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v---~~~G~g~~l~~~~~~~~~L~~ai~~vl~-~~  371 (401)
T d1rrva_         309 --HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTVLA-PE  371 (401)
T ss_dssp             --CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHHTS-HH
T ss_pred             --cCCchHHHHHHHhCCCEEEecccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhC-HH
Confidence              456788999999999999876643    33444   445678777765  48999999999984 44

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.17  E-value=9.8e-05  Score=65.16  Aligned_cols=185  Identities=12%  Similarity=0.102  Sum_probs=123.8

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhc-----cCCcCceEEeeccccCCCCCCCcc------------------------
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAAR-----VTAANKIRIWKKGVDSESFHPRFR------------------------   76 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~-----~~~~~~i~~i~~gvd~~~~~~~~~------------------------   76 (294)
                      +....+..+..+-.+|+-..+.+++..     ...+.++.-+.|||.+..+-....                        
T Consensus       430 Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~  509 (824)
T d2gj4a1         430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK  509 (824)
T ss_dssp             HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred             HHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHH
Confidence            555667778888888887777776643     234468999999999887642110                        


Q ss_pred             ------chH-------------------HHHHh-hcCCCCCceEEEeecccccccHHHHH-------HHHHhCC-----C
Q 022615           77 ------SSE-------------------MRWRL-SNGEPDKPLIVHVGRLGVEKSLDFLK-------RVMDRLP-----E  118 (294)
Q Consensus        77 ------~~~-------------------~~~~~-~~~~~~~~~i~~~G~~~~~k~~~~l~-------~~~~~~~-----~  118 (294)
                            .+.                   ...+. ....++.+.++++-|+..+|...+.+       +-++..+     .
T Consensus       510 l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P  589 (824)
T d2gj4a1         510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP  589 (824)
T ss_dssp             GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred             HHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCC
Confidence                  000                   00000 12456778899999999999876622       2223332     4


Q ss_pred             cEEEEEcCC-cc---HHHHHh-------hhcCC-------CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHH
Q 022615          119 ARIAFIGDG-PY---REELEK-------MFTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLE  178 (294)
Q Consensus       119 ~~l~i~G~~-~~---~~~~~~-------~~~~~-------~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~E  178 (294)
                      +++++.|.. |.   .+.+.+       .++..       +|.|+....-.--..++..||+.+..+.  .|+.|++-+-
T Consensus       590 ~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK  669 (824)
T d2gj4a1         590 RTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMK  669 (824)
T ss_dssp             EEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHH
T ss_pred             eEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhH
Confidence            788888852 11   122222       11211       4778887766777799999999999765  7999999999


Q ss_pred             HHhcCCCEEeecCCCcccccccCCCCcceeecC
Q 022615          179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  211 (294)
Q Consensus       179 a~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~  211 (294)
                      ++..|.+.+++-.|...|+... ..+.+|++|-
T Consensus       670 ~alNGal~lstlDGwnvEi~~~-vg~~N~~~fG  701 (824)
T d2gj4a1         670 FMLNGALTIGTMDGANVEMAEE-AGEENFFIFG  701 (824)
T ss_dssp             HHHTTCEEEECSCTTHHHHHHH-HCGGGSEECS
T ss_pred             HHHcCCeeeccccchHHHHHHh-cCcccEEEeC
Confidence            9999999999999988887621 1266788774

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.13  E-value=8e-06  Score=66.87  Aligned_cols=93  Identities=18%  Similarity=0.181  Sum_probs=65.7

Q ss_pred             CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCc--------ccccccCCCCcceeec
Q 022615          139 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI--------PDIIPEDQDGKIGYLF  210 (294)
Q Consensus       139 ~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~--------~e~~~~~~~~~~g~~~  210 (294)
                      ..|+.+.+++++   ..++..+|++|..+    ..+++.||+++|+|+|+.+..+-        .+.+   .+.+.|+.+
T Consensus       269 ~~~v~i~~~~p~---~~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l---~~~G~g~~l  338 (391)
T d1pn3a_         269 GADCFVVGEVNL---QELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRV---AELGVGVAV  338 (391)
T ss_dssp             CTTCCEESSCCH---HHHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHH---HHHTSEEEE
T ss_pred             CCCEEEecccCH---HHHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHH---HHCCCEEEc
Confidence            347999999964   45688999999764    35789999999999999775432        3344   345677777


Q ss_pred             CCC--CHHHHHHHHHHHhhChHHHHHHHHHHHHHHHhC
Q 022615          211 NPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKY  246 (294)
Q Consensus       211 ~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  246 (294)
                      +..  +.++++++|.+++++ +.    ++++++..++.
T Consensus       339 ~~~~~~~~~l~~~i~~~l~~-~~----r~~a~~~a~~~  371 (391)
T d1pn3a_         339 DGPVPTIDSLSAALDTALAP-EI----RARATTVADTI  371 (391)
T ss_dssp             CCSSCCHHHHHHHHHHHTST-TH----HHHHHHHGGGS
T ss_pred             CcCCCCHHHHHHHHHHHhCH-HH----HHHHHHHHHHH
Confidence            655  489999999999954 32    33444444444

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=7.2e-05  Score=65.92  Aligned_cols=185  Identities=12%  Similarity=0.073  Sum_probs=121.7

Q ss_pred             HHHHHHHhCCeEEecchhhHHHHHHhc-----cCCcCceEEeeccccCCCCCCCccc-----------------------
Q 022615           26 VIKFLHRAADLTLVPSVAIGKDLEAAR-----VTAANKIRIWKKGVDSESFHPRFRS-----------------------   77 (294)
Q Consensus        26 ~~~~~~~~ad~ii~~s~~~~~~~~~~~-----~~~~~~i~~i~~gvd~~~~~~~~~~-----------------------   77 (294)
                      +....+..+..+-.+|+-..+..++..     ..-+.++.-|.|||....+......                       
T Consensus       406 Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~  485 (796)
T d1l5wa_         406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN  485 (796)
T ss_dssp             HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred             hHHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHH
Confidence            334566678888899988877665533     2334689999999986655321000                       


Q ss_pred             -----------hHH---------------HHHhh-cCCCCCceEEEeecccccccHHHHHH-------HHHhCC-----C
Q 022615           78 -----------SEM---------------RWRLS-NGEPDKPLIVHVGRLGVEKSLDFLKR-------VMDRLP-----E  118 (294)
Q Consensus        78 -----------~~~---------------~~~~~-~~~~~~~~i~~~G~~~~~k~~~~l~~-------~~~~~~-----~  118 (294)
                                 ...               +.+.+ ...++.+.++++-|+..+|...+++.       .+...+     .
T Consensus       486 ~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~P  565 (796)
T d1l5wa_         486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP  565 (796)
T ss_dssp             GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred             HHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCc
Confidence                       000               00001 23567788999999999999776332       222222     3


Q ss_pred             cEEEEEcCC-cc---HHHHHh-------hhcCC-------CeEEEecccchhHHHHHhcCCEEEeecC--CCCcchHHHH
Q 022615          119 ARIAFIGDG-PY---REELEK-------MFTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLE  178 (294)
Q Consensus       119 ~~l~i~G~~-~~---~~~~~~-------~~~~~-------~v~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~E  178 (294)
                      +++++.|.. |.   .+.+.+       .++..       +|.|+...+-.--..++..||+.+..+.  .|+.|++-+-
T Consensus       566 vq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMK  645 (796)
T d1l5wa_         566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK  645 (796)
T ss_dssp             EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred             eEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHH
Confidence            788888852 21   122222       11111       4777777666677789999999999765  7999999999


Q ss_pred             HHhcCCCEEeecCCCcccccccCCCCcceeecC
Q 022615          179 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  211 (294)
Q Consensus       179 a~a~G~pvI~~~~~~~~e~~~~~~~~~~g~~~~  211 (294)
                      |+..|.+.+++-.|...|+... ..+.+|+++-
T Consensus       646 aalNG~lnlstlDGw~vE~~~~-vg~eN~f~fG  677 (796)
T d1l5wa_         646 LALNGALTVGTLDGANVEIAEK-VGEENIFIFG  677 (796)
T ss_dssp             HHHTTCEEEECSCTTHHHHHHH-HCGGGSEECS
T ss_pred             HHHcCCeeeecccchHHHHHHh-cCccceEEec
Confidence            9999999999999988887721 1267888874

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=9e-05  Score=60.44  Aligned_cols=197  Identities=15%  Similarity=0.114  Sum_probs=117.0

Q ss_pred             HHHHHHHHhCCeEEecchhhHHHHHHhccCCcCceEEeecc-ccCC-----CCCCCc-cchHHHHHhhcCC-CCCceEEE
Q 022615           25 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSE-----SFHPRF-RSSEMRWRLSNGE-PDKPLIVH   96 (294)
Q Consensus        25 ~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~i~~i~~g-vd~~-----~~~~~~-~~~~~~~~~~~~~-~~~~~i~~   96 (294)
                      .....+-+.+|..+|.++..++.+.+.+ ..+++|+++.+. +|.-     ...... ............. .+.++++.
T Consensus       133 ~~R~~iskls~~hf~~~~~~~~~L~~~G-~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt  211 (376)
T d1f6da_         133 ANRTLTGHLAMYHFSPTETSRQNLLREN-VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT  211 (376)
T ss_dssp             HHHHHHHHTCSEEEESSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEC
T ss_pred             hhhhhhccceeEEEeccHHHHhHHHhcC-CCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEe
Confidence            3444455789999999999999999966 567899999874 3310     000000 0000111111111 22333433


Q ss_pred             eecc-cccccHHHHHHHHHhC----CCcEEEEEcCCc--cHHHHHhh-hcCCCeEEEecccchhHHHHHhcCCEEEeecC
Q 022615           97 VGRL-GVEKSLDFLKRVMDRL----PEARIAFIGDGP--YREELEKM-FTGMPAVFTGMLLGEELSQAYASGDVFVMPSE  168 (294)
Q Consensus        97 ~G~~-~~~k~~~~l~~~~~~~----~~~~l~i~G~~~--~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~  168 (294)
                      .=+. ...+....+..++..+    .++.+++.....  ......+. ....|+.+...+++.++..+++.|++++--| 
T Consensus       212 ~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-  290 (376)
T d1f6da_         212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-  290 (376)
T ss_dssp             CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-
T ss_pred             cccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecC-
Confidence            3332 2233445555555433    455555443221  12222232 2345899999999999999999999998655 


Q ss_pred             CCCcchHHHHHHhcCCCEEeec-CCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhhChHHH
Q 022615          169 SETLGLVVLEAMSSGIPVVGVR-AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELR  232 (294)
Q Consensus       169 ~e~~~~~~~Ea~a~G~pvI~~~-~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~~~~~~  232 (294)
                          |.-+.||-.+|+|+|.-. ...-++.+   ..+ +.+.+. .|.+++.+++.+++.++...
T Consensus       291 ----ssgi~Ea~~lg~P~Inir~~ter~~~~---~~g-~~i~v~-~~~~~I~~ai~~~l~~~~~~  346 (376)
T d1f6da_         291 ----GGIQEEAPSLGKPVLVMRDTTERPEAV---TAG-TVRLVG-TDKQRIVEEVTRLLKDENEY  346 (376)
T ss_dssp             ----SGGGGTGGGGTCCEEECSSCCSCHHHH---HHT-SEEECC-SSHHHHHHHHHHHHHCHHHH
T ss_pred             ----cchHhhHHHhCCCEEEcCCCccCccce---ecC-eeEECC-CCHHHHHHHHHHHHhChHhh
Confidence                566789999999998642 23344444   223 333443 48999999999999886544

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=97.78  E-value=9.1e-05  Score=61.89  Aligned_cols=141  Identities=12%  Similarity=0.052  Sum_probs=84.8

Q ss_pred             ceEEEeecccc--cccHHHHHHHHHhCCCcEEEEEcCCccH-------HHHHhhhcCCCeEEEecccchhHHHHHh--cC
Q 022615           92 PLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGPYR-------EELEKMFTGMPAVFTGMLLGEELSQAYA--SG  160 (294)
Q Consensus        92 ~~i~~~G~~~~--~k~~~~l~~~~~~~~~~~l~i~G~~~~~-------~~~~~~~~~~~v~~~g~~~~~~~~~~~~--~a  160 (294)
                      .+++..|....  ......++++++.++.-.+..++.....       .... .....|+.+..++|+.++   +.  ++
T Consensus       290 ~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~~Pq~~l---L~hp~~  365 (473)
T d2pq6a1         290 VVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFT-NEIADRGLIASWCPQDKV---LNHPSI  365 (473)
T ss_dssp             EEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHH-HHHTTTEEEESCCCHHHH---HTSTTE
T ss_pred             eeeeccCccccccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccch-hhccCceEEeeeCCHHHH---hcCCcC
Confidence            34444554422  2335667788888765444445432111       1111 112458999999977664   64  55


Q ss_pred             CEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC-CHHHHHHHHHHHhhChHHHHHH
Q 022615          161 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG-DLDDCLSKLEPLLYNQELRETM  235 (294)
Q Consensus       161 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~-d~~~l~~~i~~ll~~~~~~~~~  235 (294)
                      +++|.    -|..+++.||+.+|+|+|+....+    ....+.  +..+.|...+.. +.+++.++|.++++|+.. +++
T Consensus       366 ~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~--~~~G~G~~l~~~~t~~~l~~ai~~vl~d~~~-~~~  438 (473)
T d2pq6a1         366 GGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDKG-KKM  438 (473)
T ss_dssp             EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHHH-HHH
T ss_pred             cEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHH--HHcCeEEeeCCCcCHHHHHHHHHHHHcCChH-HHH
Confidence            55652    355678999999999999876532    222220  223567766643 789999999999999762 345


Q ss_pred             HHHHHHHH
Q 022615          236 GQAARQEM  243 (294)
Q Consensus       236 ~~~~~~~~  243 (294)
                      ++++++..
T Consensus       439 r~~a~~l~  446 (473)
T d2pq6a1         439 KQKAMELK  446 (473)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55555543

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=97.25  E-value=0.0025  Score=52.59  Aligned_cols=84  Identities=15%  Similarity=0.073  Sum_probs=57.4

Q ss_pred             CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccc-cccCCCCcceeecCC-
Q 022615          139 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDI-IPEDQDGKIGYLFNP-  212 (294)
Q Consensus       139 ~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~-~~~~~~~~~g~~~~~-  212 (294)
                      ..|+.+..+.++.++. .+..++++|.    -|..+++.||+.+|+|+|+....+    .... +   +..+.|+.++. 
T Consensus       329 ~~n~~v~~~~pq~~~l-~~p~~~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlv---e~~G~G~~l~~~  400 (461)
T d2acva1         329 EGKGMICGWAPQVEVL-AHKAIGGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV---KEWGVGLGLRVD  400 (461)
T ss_dssp             HCSEEEESSCCHHHHH-HSTTEEEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH---HTSCCEEESCSS
T ss_pred             CCCeEEEecCCHHHHH-hcccCCEEEe----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHH---HHhCceEEeecc
Confidence            3467777777666554 5677888873    345678999999999999875532    2222 2   33456666543 


Q ss_pred             -------CCHHHHHHHHHHHhhChH
Q 022615          213 -------GDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       213 -------~d~~~l~~~i~~ll~~~~  230 (294)
                             -+.+++.++|.+++++++
T Consensus       401 ~~~~~~~~t~~~l~~a~~~vl~~d~  425 (461)
T d2acva1         401 YRKGSDVVAAEEIEKGLKDLMDKDS  425 (461)
T ss_dssp             CCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred             ccccCCccCHHHHHHHHHHHhhCCH
Confidence                   268999999999996533

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.0038  Score=49.73  Aligned_cols=94  Identities=13%  Similarity=0.128  Sum_probs=62.7

Q ss_pred             CceEEEee-ccccccc--HHHHHHHHHhC--CCcEEEEEcCCccHHHHHhhhcCC------C-eEEEecccchhHHHHHh
Q 022615           91 KPLIVHVG-RLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQAYA  158 (294)
Q Consensus        91 ~~~i~~~G-~~~~~k~--~~~l~~~~~~~--~~~~l~i~G~~~~~~~~~~~~~~~------~-v~~~g~~~~~~~~~~~~  158 (294)
                      ..+++..| +....|.  .+.+.++++.+  .+..++++|...+.+..+......      + +.+.|..+-.++..+++
T Consensus       181 ~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~  260 (348)
T d1pswa_         181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIA  260 (348)
T ss_dssp             CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHH
T ss_pred             CeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHHHh
Confidence            34445554 3334454  33444444443  467888999776666655554322      2 44567777799999999


Q ss_pred             cCCEEEeecCCCCcchHHHHHHhcCCCEEee
Q 022615          159 SGDVFVMPSESETLGLVVLEAMSSGIPVVGV  189 (294)
Q Consensus       159 ~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~  189 (294)
                      .||++|.+.     +..+--|.++|+|+|+-
T Consensus       261 ~a~l~I~~D-----tg~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         261 ACKAIVTND-----SGLMHVAAALNRPLVAL  286 (348)
T ss_dssp             TSSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred             cceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence            999999886     45567799999999985

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=97.12  E-value=0.0013  Score=54.29  Aligned_cols=142  Identities=13%  Similarity=0.108  Sum_probs=81.5

Q ss_pred             CCceEEEeeccccc--ccHHHHHHHHHhCCCcEEEEEcCCccHHHHHh---hhcCCCeEEEecccchhHHHHHhcCCEEE
Q 022615           90 DKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGPYREELEK---MFTGMPAVFTGMLLGEELSQAYASGDVFV  164 (294)
Q Consensus        90 ~~~~i~~~G~~~~~--k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~---~~~~~~v~~~g~~~~~~~~~~~~~ad~~l  164 (294)
                      ...+.+..|.....  .....++++++..+ .++++...+.....+..   .....|+.+..++++.++.. ...++++|
T Consensus       265 ~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~-~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq~~lL~-hp~~~~fI  342 (450)
T d2c1xa1         265 TSVVYISFGTVTTPPPAEVVALSEALEASR-VPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLA-HEAVGAFV  342 (450)
T ss_dssp             TCEEEEECCSSCCCCHHHHHHHHHHHHHHT-CCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHT-STTEEEEE
T ss_pred             cceeeecccccccCCHHHHHHHHHHHHhcC-CeEEEEECCCccccCChhhhhhccccccccccCChHhhhc-cCceeEEE
Confidence            34455555555322  22455666666653 45554433222111110   11134788899987765422 24556565


Q ss_pred             eecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCCC--CHHHHHHHHHHHhhChHHHHHHHHH
Q 022615          165 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  238 (294)
Q Consensus       165 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~  238 (294)
                      .    -|..+++.||+.+|+|+|+....+    ....+.  +..+.|+..+..  +.+++.++|.++++|+.. ++.+++
T Consensus       343 t----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~--~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~y-~~~~~r  415 (450)
T d2c1xa1         343 T----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE--DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKG-KKLREN  415 (450)
T ss_dssp             E----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHH-HHHHHH
T ss_pred             c----cCCccHHHHHHHcCCCEEecccccchHHHHHHHH--HHcCcEEEecCCCcCHHHHHHHHHHHhcCcHH-HHHHHH
Confidence            2    355678999999999999876542    122220  224677766544  689999999999999753 333444


Q ss_pred             HH
Q 022615          239 AR  240 (294)
Q Consensus       239 ~~  240 (294)
                      +.
T Consensus       416 ~~  417 (450)
T d2c1xa1         416 LR  417 (450)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.57  E-value=0.14  Score=41.65  Aligned_cols=85  Identities=14%  Similarity=0.071  Sum_probs=56.4

Q ss_pred             CCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCC----cccccccCCCCcceeecCC--
Q 022615          139 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--  212 (294)
Q Consensus       139 ~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~~~~~~g~~~~~--  212 (294)
                      ..||.+.+++|+.++... .+++++|  +  -|..+++.||+.+|+|+|+....+    ....+.  +..+.|+....  
T Consensus       333 ~~nv~~~~w~Pq~~lL~h-p~~~~fV--t--HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~--e~lG~Gv~l~~~~  405 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLAH-PSTGGFL--T--HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS--EDIRAALRPRAGD  405 (471)
T ss_dssp             TTEEEEESCCCHHHHHHS-TTEEEEE--E--CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTTCCEECCCCCT
T ss_pred             CCCeeecccCCHHHHhcC-ccCCEEE--e--cCCccHHHHHHHcCCCEEEcccccccHHHHHHHH--HHheeEEEEecCC
Confidence            447999999988764321 3455555  2  355678999999999999876532    112120  12345554433  


Q ss_pred             ---CCHHHHHHHHHHHhhChH
Q 022615          213 ---GDLDDCLSKLEPLLYNQE  230 (294)
Q Consensus       213 ---~d~~~l~~~i~~ll~~~~  230 (294)
                         -+.+++.++|.++++|++
T Consensus       406 ~~~~t~~~l~~ai~~vl~~~~  426 (471)
T d2vcha1         406 DGLVRREEVARVVKGLMEGEE  426 (471)
T ss_dssp             TSCCCHHHHHHHHHHHHTSTH
T ss_pred             CCcCCHHHHHHHHHHHhCCcH
Confidence               277999999999998875

>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=93.07  E-value=0.42  Score=37.43  Aligned_cols=98  Identities=7%  Similarity=0.004  Sum_probs=68.8

Q ss_pred             HhhhcCCCeEEEecc------cchhHHHHHhcCCEEEeecC--CCC-cchHHHHHHhcCCCEEeecCCCcccccccCCCC
Q 022615          134 EKMFTGMPAVFTGML------LGEELSQAYASGDVFVMPSE--SET-LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG  204 (294)
Q Consensus       134 ~~~~~~~~v~~~g~~------~~~~~~~~~~~ad~~l~ps~--~e~-~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~  204 (294)
                      .++.+...|...|..      +..+-.++++...+.|+.-.  ..+ +.-++++|+.+|+..|....+.+.+.+   .  
T Consensus       200 ~~L~k~~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~~i~~~f---~--  274 (349)
T d2nzwa1         200 DALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDF---N--  274 (349)
T ss_dssp             HHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTS---C--
T ss_pred             HHHhccCeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCCcHHHcC---C--
Confidence            333333356666654      33567789999999888643  333 578999999999877777666777777   2  


Q ss_pred             cceee-c-CCCCHHHHHHHHHHHhhChHHHHHHH
Q 022615          205 KIGYL-F-NPGDLDDCLSKLEPLLYNQELRETMG  236 (294)
Q Consensus       205 ~~g~~-~-~~~d~~~l~~~i~~ll~~~~~~~~~~  236 (294)
                      ..+++ + +..+.+++++.|..+-.|++.+.++-
T Consensus       275 ~~sfI~~~df~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         275 PKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             GGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CccEEEhhhCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            22332 2 44689999999999988988776654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=92.31  E-value=0.66  Score=31.75  Aligned_cols=95  Identities=11%  Similarity=0.065  Sum_probs=54.9

Q ss_pred             CCceEEEeecccccccHHHHHHHHHhCCCcEEEEEcCCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCC
Q 022615           90 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  169 (294)
Q Consensus        90 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~  169 (294)
                      +...++.+|.-.-   -..+.+.+....--++.+++...  +..+++..+.+...   .+.+++.+.+..+|+++..+..
T Consensus        23 ~~~~ilviGaG~~---g~~v~~~L~~~g~~~i~v~nRt~--~ka~~l~~~~~~~~---~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          23 HDKTVLVVGAGEM---GKTVAKSLVDRGVRAVLVANRTY--ERAVELARDLGGEA---VRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             TTCEEEEESCCHH---HHHHHHHHHHHCCSEEEEECSSH--HHHHHHHHHHTCEE---CCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCeEEEECCCHH---HHHHHHHHHhcCCcEEEEEcCcH--HHHHHHHHhhhccc---ccchhHHHHhccCCEEEEecCC
Confidence            4445666664211   23444544443223677777543  34444444444443   3458999999999999987643


Q ss_pred             C--CcchHHHHHHh----cCCCEEeecCC
Q 022615          170 E--TLGLVVLEAMS----SGIPVVGVRAG  192 (294)
Q Consensus       170 e--~~~~~~~Ea~a----~G~pvI~~~~~  192 (294)
                      .  -+.-..++...    .+.|.+.-|.+
T Consensus        95 ~~~ii~~~~i~~~~~~r~~~~~~~iiDla  123 (159)
T d1gpja2          95 PHPVIHVDDVREALRKRDRRSPILIIDIA  123 (159)
T ss_dssp             SSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             CCccccHhhhHHHHHhcccCCCeEEEeec
Confidence            2  23444554432    57898888875

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.27  E-value=0.33  Score=32.33  Aligned_cols=75  Identities=11%  Similarity=0.095  Sum_probs=49.0

Q ss_pred             EEEEc-CCccHHHHHhhh-cCCCeEEEecccchhHHHHH--hcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCcc
Q 022615          121 IAFIG-DGPYREELEKMF-TGMPAVFTGMLLGEELSQAY--ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  195 (294)
Q Consensus       121 l~i~G-~~~~~~~~~~~~-~~~~v~~~g~~~~~~~~~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~  195 (294)
                      +.|.| .|..-+.+.+.+ ...++.+.+-++..+....+  ..+|+++--|..++....+-.+...|+|+|+...|...
T Consensus         2 I~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~   80 (135)
T d1yl7a1           2 VGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA   80 (135)
T ss_dssp             EEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccch
Confidence            45666 455555544443 33455555555443322222  46899999999888888888899999999987666544

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=85.68  E-value=3.3  Score=27.14  Aligned_cols=109  Identities=22%  Similarity=0.181  Sum_probs=63.4

Q ss_pred             cEEEEEcCCc-cHHHHHhhhcCCCeEEEecccchhHHHHHhc--CCEEEeecCC-CCcchHHHHHHh-----cCCCEEe-
Q 022615          119 ARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSES-ETLGLVVLEAMS-----SGIPVVG-  188 (294)
Q Consensus       119 ~~l~i~G~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~--ad~~l~ps~~-e~~~~~~~Ea~a-----~G~pvI~-  188 (294)
                      .+++|+-+.+ ..+.+.......+......-+.++..+++..  .|++++-... +.-|..+++.+-     ..+|||. 
T Consensus         2 arILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~~~~~~~~piI~l   81 (139)
T d1w25a1           2 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLI   81 (139)
T ss_dssp             CEEEEECSSTTHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEEccchhhhhhhhcccceeeeeeccccCCCchHHHHHhhhcccccCCCEEEE
Confidence            3556665443 3445555555545444433344555555544  6887775443 333555555442     4578776 


Q ss_pred             ecCCCcccccccCCCCcceeecCCCCHHHHHHHHHHHhh
Q 022615          189 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  227 (294)
Q Consensus       189 ~~~~~~~e~~~~~~~~~~g~~~~~~d~~~l~~~i~~ll~  227 (294)
                      |..+.........+.|-.+++..|-+.+++...|..++.
T Consensus        82 t~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr  120 (139)
T d1w25a1          82 TALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR  120 (139)
T ss_dssp             ECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             EcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence            444433333222256888999999999999999987764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.89  E-value=0.22  Score=32.88  Aligned_cols=76  Identities=17%  Similarity=0.103  Sum_probs=50.7

Q ss_pred             EEEEEc-CCccHHHHHhhhcCCCeEEEecccchhHHHHHhcCCEEEeecCCCCcchHHHHHHhcCCCEEeecCCCccc
Q 022615          120 RIAFIG-DGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  196 (294)
Q Consensus       120 ~l~i~G-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e  196 (294)
                      ++.|.| .|..-+.+.+.+.+.+..+.+.++.+. .+.+..+|+++--|..++....+--+...|+|+|+...|...+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-~~~~~~~DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG~~~~   78 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-VEELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEE   78 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-EEECSCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCSCCHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-HHHhccCCEEEEecCHHHHHHHHHHHHhcCCCEEEEcCCCCHH
Confidence            456677 366666666665555544444443221 2235678999998988888888888899999998876664443