Citrus Sinensis ID: 022823


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYKETSGEESRDPLIVSYA
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHEEEEEcccccHHHHHHHHHcccccccEEcccccccccccccccccEEEEEEEEHHcccccccccccccccccc
cHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcHccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHcccccccccccccEEEEcc
MILTITYQALTVLKDAVGIAGNIFAfglfvspvptfRRIIRnhsteefsglPYVYALLNCLITMwygtplvsadniLVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTksvefmpfYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLqkkvicplVTITFLLKFQVPNGIGTILGIVQLALYFNYketsgeesrdplivsya
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNhsteefsglPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYketsgeesrdplivsya
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYlslstflmstsflAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYKETSGEESRDPLIVSYA
*ILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYK****************
*******QALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFML************************************GTILGIVQLAL**************PL*****
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYKETSGEESRDPLIVSYA
MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYKET****SRDPLIVS*A
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MILTITYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFLLKFQVPNGIGTILGIVQLALYFNYKETSGEESRDPLIVSYA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query291 2.2.26 [Sep-21-2011]
Q9LH79236 Bidirectional sugar trans yes no 0.652 0.805 0.684 7e-69
Q5JJY5243 Bidirectional sugar trans yes no 0.628 0.753 0.614 2e-58
A2WR31243 Bidirectional sugar trans N/A no 0.628 0.753 0.614 2e-58
Q5N8J1230 Bidirectional sugar trans no no 0.628 0.795 0.559 7e-51
B8A833230 Bidirectional sugar trans N/A no 0.628 0.795 0.559 7e-51
Q8RZQ8273 Bidirectional sugar trans no no 0.625 0.666 0.505 4e-47
Q8L9J7247 Bidirectional sugar trans no no 0.625 0.736 0.472 3e-44
B8AYH1261 Bidirectional sugar trans N/A no 0.625 0.697 0.475 4e-41
Q60EC2261 Bidirectional sugar trans no no 0.625 0.697 0.469 6e-41
Q8LBF7258 Bidirectional sugar trans no no 0.711 0.802 0.394 2e-34
>sp|Q9LH79|SWET2_ARATH Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=2 SV=1 Back     alignment and function desciption
 Score =  260 bits (665), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 130/190 (68%), Positives = 156/190 (82%)

Query: 9   ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGT 68
           +L++ KD  GIAGNIFAFGLFVSP+PTFRRI+RN STE+FSGLPY+YALLNCLI +WYGT
Sbjct: 9   SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68

Query: 69  PLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQ 128
           P +S  N ++ TVNS+GA FQL YIILFI +T+K  K++MLGLL  V  +  +IVA SLQ
Sbjct: 69  PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNKMKMLGLLFVVFAVVGVIVAGSLQ 128

Query: 129 IVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAY 188
           I +  +R  FVG LSC +L+SMFASPLF+INLVI+TKSVEFMPFYLSLSTFLMS SFL Y
Sbjct: 129 IPDQLTRWYFVGFLSCGSLVSMFASPLFVINLVIRTKSVEFMPFYLSLSTFLMSASFLLY 188

Query: 189 GIMNWDPFIY 198
           G+ N D F+Y
Sbjct: 189 GLFNSDAFVY 198




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q5JJY5|SWT2A_ORYSJ Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1 Back     alignment and function description
>sp|A2WR31|SWT2A_ORYSI Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A PE=3 SV=2 Back     alignment and function description
>sp|Q5N8J1|SWT2B_ORYSJ Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. japonica GN=SWEET2B PE=2 SV=1 Back     alignment and function description
>sp|B8A833|SWT2B_ORYSI Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. indica GN=SWEET2B PE=3 SV=1 Back     alignment and function description
>sp|Q8RZQ8|SWT1A_ORYSJ Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1 Back     alignment and function description
>sp|Q8L9J7|SWET1_ARATH Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1 Back     alignment and function description
>sp|B8AYH1|SWT1B_ORYSI Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1 Back     alignment and function description
>sp|Q60EC2|SWT1B_ORYSJ Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica GN=SWEET1B PE=2 SV=1 Back     alignment and function description
>sp|Q8LBF7|SWET7_ARATH Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
356556652235 PREDICTED: bidirectional sugar transport 0.786 0.974 0.596 4e-81
225461810235 PREDICTED: bidirectional sugar transport 0.649 0.804 0.777 1e-78
356544144235 PREDICTED: bidirectional sugar transport 0.683 0.846 0.738 1e-77
351722328235 uncharacterized protein LOC100305842 [Gl 0.683 0.846 0.743 1e-77
388506414236 unknown [Medicago truncatula] 0.642 0.792 0.760 1e-75
358348726236 Protein RUPTURED POLLEN GRAIN [Medicago 0.642 0.792 0.760 1e-75
217073964236 unknown [Medicago truncatula] gi|3884951 0.642 0.792 0.755 3e-74
358343709235 Protein RUPTURED POLLEN GRAIN [Medicago 0.666 0.825 0.731 4e-74
255639413210 unknown [Glycine max] 0.628 0.871 0.743 1e-71
388521553235 unknown [Lotus japonicus] 0.646 0.8 0.771 3e-70
>gi|356556652|ref|XP_003546637.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] Back     alignment and taxonomy information
 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 170/285 (59%), Positives = 192/285 (67%), Gaps = 56/285 (19%)

Query: 6   TYQALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMW 65
            Y    V KDA G+AGNIFAFGLFVSP+PTFRRIIRN STE FSGLPY+Y+LLNC+I +W
Sbjct: 6   AYSICEVGKDAAGVAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCMICLW 65

Query: 66  YGTPLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAV 125
           YGTPL+S DN+LVTTVNSIGAAFQLVYIILF+ Y EK +KVRM+GLLLAV+GIF II+  
Sbjct: 66  YGTPLISPDNLLVTTVNSIGAAFQLVYIILFLMYAEKARKVRMVGLLLAVLGIFVIILVG 125

Query: 126 SLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSF 185
           SLQI +   R+MFVG LSCA+LISMFASPLFII LVI+TKS+EFMPFYLSLSTFLMS   
Sbjct: 126 SLQIDDSAMRRMFVGFLSCASLISMFASPLFIIKLVIRTKSIEFMPFYLSLSTFLMS--- 182

Query: 186 LAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLV 245
                                            F F LY         LL     I    
Sbjct: 183 ---------------------------------FSFFLYG--------LLSDDAFI---- 197

Query: 246 TITFLLKFQVPNGIGTILGIVQLALYFNYKETSGEESRDPLIVSY 290
                    VPNGIGT+LGI+QL LYF YK +S EE R+PLIVSY
Sbjct: 198 --------YVPNGIGTVLGIIQLVLYFYYKGSSSEECREPLIVSY 234




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461810|ref|XP_002285636.1| PREDICTED: bidirectional sugar transporter SWEET2 [Vitis vinifera] gi|302142809|emb|CBI20104.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356544144|ref|XP_003540515.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] Back     alignment and taxonomy information
>gi|351722328|ref|NP_001237496.1| uncharacterized protein LOC100305842 [Glycine max] gi|255626749|gb|ACU13719.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388506414|gb|AFK41273.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|358348726|ref|XP_003638394.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355504329|gb|AES85532.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] Back     alignment and taxonomy information
>gi|217073964|gb|ACJ85342.1| unknown [Medicago truncatula] gi|388495182|gb|AFK35657.1| unknown [Medicago truncatula] gi|388517353|gb|AFK46738.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|358343709|ref|XP_003635940.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355501875|gb|AES83078.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|388509868|gb|AFK43000.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255639413|gb|ACU20002.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388521553|gb|AFK48838.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
TAIR|locus:2099362236 SWEET2 "AT3G14770" [Arabidopsi 0.652 0.805 0.621 2.1e-61
UNIPROTKB|A2WR31243 SWEET2A "Bidirectional sugar t 0.625 0.748 0.565 3.3e-59
UNIPROTKB|Q5JJY5243 SWEET2A "Bidirectional sugar t 0.625 0.748 0.565 3.3e-59
UNIPROTKB|Q8RZQ8273 SWEET1A "Bidirectional sugar t 0.625 0.666 0.461 3.3e-47
TAIR|locus:2026997247 SWEET1 [Arabidopsis thaliana ( 0.625 0.736 0.434 5.3e-47
UNIPROTKB|B8AYH1261 SWEET1B "Bidirectional sugar t 0.625 0.697 0.437 3.3e-45
UNIPROTKB|Q60EC2261 SWEET1B "Bidirectional sugar t 0.625 0.697 0.437 3.3e-45
UNIPROTKB|B8A833230 SWEET2B "Bidirectional sugar t 0.628 0.795 0.5 8.1e-44
UNIPROTKB|Q5N8J1230 SWEET2B "Bidirectional sugar t 0.628 0.795 0.5 8.1e-44
TAIR|locus:2033319261 SWEET6 [Arabidopsis thaliana ( 0.731 0.816 0.331 9.3e-38
TAIR|locus:2099362 SWEET2 "AT3G14770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 118/190 (62%), Positives = 144/190 (75%)

Query:     9 ALTVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGT 68
             +L++ KD  GIAGNIFAFGLFVSP+PTFRRI+RN STE+FSGLPY+YALLNCLI +WYGT
Sbjct:     9 SLSMCKDVAGIAGNIFAFGLFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWYGT 68

Query:    69 PLVSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQ 128
             P +S  N ++ TVNS+GA FQL YIILFI +T+K  K++MLGLL  V  +  +IVA SLQ
Sbjct:    69 PFISHSNAMLMTVNSVGATFQLCYIILFIMHTDKKNKMKMLGLLFVVFAVVGVIVAGSLQ 128

Query:   129 IVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYXXXXXXXXXXXXXAY 188
             I +  +R  FVG LSC +L+SMFASPLF+INLVI+TKSVEFMPFY              Y
Sbjct:   129 IPDQLTRWYFVGFLSCGSLVSMFASPLFVINLVIRTKSVEFMPFYLSLSTFLMSASFLLY 188

Query:   189 GIMNWDPFIY 198
             G+ N D F+Y
Sbjct:   189 GLFNSDAFVY 198


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
UNIPROTKB|A2WR31 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5JJY5 SWEET2A "Bidirectional sugar transporter SWEET2a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2026997 SWEET1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|B8A833 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q5N8J1 SWEET2B "Bidirectional sugar transporter SWEET2b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2033319 SWEET6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5JJY5SWT2A_ORYSJNo assigned EC number0.61410.62880.7530yesno
Q9LH79SWET2_ARATHNo assigned EC number0.68420.65290.8050yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00027922001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (235 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 2e-14
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 9e-09
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 17  VGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNI 76
           +G+   +F+  +F+SP+   R++I+  S E    LP++  LL+  + + YG   +   + 
Sbjct: 3   LGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYG---LLKKDG 59

Query: 77  LVTTVNSIGAAFQLVYIILFITYTEKDK 104
            +   N +G     +Y+ILFI Y  K  
Sbjct: 60  YIIIPNGVGCVLGTIYLILFIIYPPKKA 87


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 291
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.82
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.8
KOG1623243 consensus Multitransmembrane protein [General func 99.43
COG409589 Uncharacterized conserved protein [Function unknow 99.11
COG409589 Uncharacterized conserved protein [Function unknow 98.88
TIGR00951220 2A43 Lysosomal Cystine Transporter. 98.25
PF0419361 PQ-loop: PQ loop repeat 97.79
PF0419361 PQ-loop: PQ loop repeat 97.59
PRK01021 608 lpxB lipid-A-disaccharide synthase; Reviewed 95.83
KOG3211230 consensus Predicted endoplasmic reticulum membrane 95.46
KOG2913260 consensus Predicted membrane protein [Function unk 95.25
smart0067932 CTNS Repeated motif present between transmembrane 92.75
TIGR00951220 2A43 Lysosomal Cystine Transporter. 89.53
PHA02246192 hypothetical protein 88.03
smart0067932 CTNS Repeated motif present between transmembrane 85.17
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 85.15
KOG1589118 consensus Uncharacterized conserved protein [Funct 82.99
PF10688163 Imp-YgjV: Bacterial inner membrane protein; InterP 82.23
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=2.1e-46  Score=340.93  Aligned_cols=211  Identities=44%  Similarity=0.745  Sum_probs=185.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHHhhhhhccCCcEEEeehhhhhHHHH
Q 022823           11 TVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQL   90 (291)
Q Consensus        11 ~~~~~ilG~la~i~ti~mflSPlp~i~~I~k~KStg~~s~lp~v~~~~n~~lWl~YG~~ll~~d~~~Vi~~N~iG~~l~~   90 (291)
                      +...+.+|..|.++++++|++|+|+++||+|+||+|++|..||+++.+||.+|+.||  ++.+|+..++.+|++|+++++
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG--~~~~~d~llitIN~~G~~ie~   80 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG--LLKVHDYLLITINGIGLVIET   80 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh--hhccCceEEEEEehhcHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999  666634589999999999999


Q ss_pred             HHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccchhhhhhhHHHHHHHHhhchHHHHHHHHhcCCcccc
Q 022823           91 VYIILFITYTEKDKKVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIINLVIQTKSVEFM  170 (291)
Q Consensus        91 ~yl~vf~~y~~~k~r~~~~~~~~~~~~i~si~~~~~~~~~~~~~~~~~lG~ia~v~ti~~f~SPL~~i~~VIrtKs~~~m  170 (291)
                      +|+..|+.|+++|++.+..... .+.++...+++.....++++.+.+.+|.+|.+++++||+|||..+|+||||||+|+|
T Consensus        81 ~Yi~~f~~ya~~k~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~m  159 (243)
T KOG1623|consen   81 VYISIFLYYAPKKKTVKIVLAL-VLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYM  159 (243)
T ss_pred             HHHHHHheecCchheeEeeehH-HHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeee
Confidence            9999999999988844322111 111222222344455667777899999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHhhcccCCceeEeeccccccchhhheeceeeeeEEeecccccchhhHHhhhhcccCccceeehh
Q 022823          171 PFYLSLSTFLMSTSFLAYGIMNWDPFIYVWFLLPSHFSLLILFGVCFFFCFMLYNIQTVSLQSLLLQKKVICPLVTITFL  250 (291)
Q Consensus       171 p~~l~l~~~ln~~lW~~YGll~~D~fI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (291)
                      |++++++.++++.+|++||++++|.|+.                                                    
T Consensus       160 Pf~Ls~a~fl~a~~W~lYGlli~D~~Ia----------------------------------------------------  187 (243)
T KOG1623|consen  160 PFPLSFALFLVAVQWLLYGLLIKDFFIA----------------------------------------------------  187 (243)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCeEEE----------------------------------------------------
Confidence            9999999999999999999999999999                                                    


Q ss_pred             hhcccCchhHHHHHHHHhhheeeecCCCCC
Q 022823          251 LKFQVPNGIGTILGIVQLALYFNYKETSGE  280 (291)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (291)
                          +||++|.++|++||.||+.||+++.+
T Consensus       188 ----ipN~iG~~l~~~QL~Ly~~y~~~~~~  213 (243)
T KOG1623|consen  188 ----IPNVLGFLLGLIQLILYFKYPKTTEK  213 (243)
T ss_pred             ----cccHHHHHHHHHHHHHhhhcCCCccc
Confidence                99999999999999999999987744



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 61/367 (16%), Positives = 113/367 (30%), Gaps = 134/367 (36%)

Query: 36  FRRIIRNHSTEEFSGLPYVYALLNCLITM---WYGTPLVSADN---ILVTT-----VNSI 84
            RR++++         PY     NCL+ +          + +    IL+TT      + +
Sbjct: 234 LRRLLKSK--------PYE----NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL 281

Query: 85  GAAFQLVYII--------------LFITYTE---KDKKVRMLG---LLLAVIGI------ 118
            AA      +              L + Y +   +D    +L      L++I        
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 119 -------------FSIIVAVSLQIVNPFS-RQMFVGLLSCA----------ALISMF--- 151
                         + I+  SL ++ P   R+MF      +           L+S+    
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD---RLSVFPPSAHIPTILLSLIWFD 398

Query: 152 ---ASPLFIIN------LVIQ---TKSVEFMPFYLSLSTFLMSTSFL------AYGIM-- 191
              +  + ++N      LV +     ++     YL L   L +   L       Y I   
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT 458

Query: 192 --NWDPFI-----YVWFLLPSHFS------LLILFGVCFF-FCFMLYNIQ--------TV 229
             + D        Y +  +  H         + LF + F  F F+   I+        + 
Sbjct: 459 FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG 518

Query: 230 SLQSLLLQ----KKVICP-------LVT--ITFLLKFQVPNGIGTILGIVQLALYFNYKE 276
           S+ + L Q    K  IC        LV   + FL K +          ++++AL    + 
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA 578

Query: 277 TSGEESR 283
              E  +
Sbjct: 579 IFEEAHK 585


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00