Citrus Sinensis ID: 022854


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLGKA
ccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEcccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccEEEcccEEEEEEEcccccc
cccccHHHcHHcccccccccccccHHHHccccccccccccccccEEEEcccccccHHHHHHHHHccccccccccEEEEEEEEccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEcccccccccEccccHHHHHHHHHHHHHcccccEEEEEcccccEEEEEcccEEEEEEcccccc
MMRPATMIRNACLRNFsqslrvgsaflksgdfcRYTSQAAASLQqdcepsaysddesadhmdwdnlgfgltpadymytmkcsndyfekgrlsrygkielspssgvlnygQGLFEGMKAYRKedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscNIFILKGLLGKA
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKielspssgvLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVnkknleevsscnifilkgllgka
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLGKA
*******IRNACLRNFSQSLRVGSAFLKSGDFCRYTS***********************MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLL***
**************************************************************WDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLG**
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQA*****************SADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLGKA
*MRPATMIRNACLRNFSQSLRVGSAFL*SGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGL****
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MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLGKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query291 2.2.26 [Sep-21-2011]
Q9M439 388 Branched-chain-amino-acid yes no 0.958 0.719 0.667 1e-110
Q9FYA6 415 Branched-chain-amino-acid no no 0.938 0.657 0.629 1e-101
Q9M401 413 Branched-chain-amino-acid no no 0.786 0.554 0.711 1e-98
Q93Y32 384 Branched-chain-amino-acid no no 0.931 0.705 0.610 7e-94
Q9LPM9 356 Branched-chain-amino-acid no no 0.793 0.648 0.605 4e-85
Q9LPM8 367 Putative branched-chain-a no no 0.793 0.629 0.618 7e-85
Q9LE06 354 Methionine aminotransfera no no 0.810 0.666 0.543 4e-76
P39576 363 Branched-chain-amino-acid yes no 0.749 0.600 0.422 4e-48
O31461 356 Branched-chain-amino-acid no no 0.766 0.626 0.435 4e-48
P54689 343 Branched-chain-amino-acid yes no 0.759 0.644 0.412 3e-45
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  398 bits (1022), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/289 (66%), Positives = 233/289 (80%), Gaps = 10/289 (3%)

Query: 1   MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYS--DDESA 58
           M++  T +R   +      +R    F K      Y +QAA++L+++ +   Y   DD  A
Sbjct: 1   MIKTITSLRKTLVLPLHLHIRTLQTFAK------YNAQAASALREERKKPLYQNGDDVYA 54

Query: 59  DHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMK 117
           D +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG K
Sbjct: 55  D-LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTK 113

Query: 118 AYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS 177
           AYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+
Sbjct: 114 AYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGT 173

Query: 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGG 237
           LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAGG
Sbjct: 174 LYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGG 233

Query: 238 VKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG 286
           VK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG
Sbjct: 234 VKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKG 282




Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
302142143387 unnamed protein product [Vitis vinifera] 0.948 0.713 0.748 1e-117
225458938387 PREDICTED: branched-chain-amino-acid ami 0.948 0.713 0.744 1e-117
255537936 399 branched-chain amino acid aminotransfera 0.955 0.696 0.708 1e-116
449450320390 PREDICTED: branched-chain-amino-acid ami 0.886 0.661 0.743 1e-111
288310302389 branched chain amino acid transaminase [ 0.852 0.637 0.76 1e-110
14280354385 branched-chain amino acid aminotransfera 0.927 0.701 0.677 1e-108
15218409388 branched-chain-amino-acid aminotransfera 0.958 0.719 0.667 1e-108
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.872 0.654 0.717 1e-108
407317193 393 mitochodrial branched-chain aminotransfe 0.951 0.704 0.673 1e-106
359492522379 PREDICTED: branched-chain-amino-acid ami 0.790 0.606 0.798 1e-106
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/278 (74%), Positives = 235/278 (84%), Gaps = 2/278 (0%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           R AC RN   SLR GS   K      +TS+ A SLQ   EPS YSDDE AD +DWDNLGF
Sbjct: 4   RRACFRNLILSLRTGSTASKLRSSNCFTSRTAPSLQPLVEPSPYSDDEYAD-VDWDNLGF 62

Query: 69  GLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
           GL P DYMYT KCS    FE+G LSRYG IELSPS+GVLNYGQGLFEG KAYR+E+G+L 
Sbjct: 63  GLIPTDYMYTTKCSEGGNFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLC 122

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRPDQNAIR+Q GAERMCMPSPSI  F++AVKQTALANKRW+PPPGKGSLYIRPLL+GS
Sbjct: 123 LFRPDQNAIRMQVGAERMCMPSPSIHHFVEAVKQTALANKRWIPPPGKGSLYIRPLLMGS 182

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPV 247
           GP+LGL PAPE TFL++ASPVGNYFK+  APLNL+++DE+HRAT GGAGGVKAI+NY+PV
Sbjct: 183 GPVLGLGPAPECTFLIYASPVGNYFKQVSAPLNLFIDDEYHRATRGGAGGVKAITNYSPV 242

Query: 248 LKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK 285
           LKA SRAK+RGFSDVL+LDSVNKKN+EEVSSCNIFI+K
Sbjct: 243 LKAQSRAKSRGFSDVLFLDSVNKKNIEEVSSCNIFIVK 280




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|14280354|gb|AAK57535.1| branched-chain amino acid aminotransferase [Capsicum annuum] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information
>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
TAIR|locus:2201921 388 BCAT-2 "branched-chain amino a 0.872 0.654 0.728 2.3e-101
TAIR|locus:2097320 413 BCAT3 "branched-chain aminotra 0.786 0.554 0.711 9.3e-91
TAIR|locus:2201931 384 BCAT-1 "branched-chain amino a 0.948 0.718 0.602 2.4e-85
TAIR|locus:2031040 367 BCAT7 "branched-chain amino ac 0.845 0.670 0.594 1.4e-78
TAIR|locus:2031030 356 AT1G50110 [Arabidopsis thalian 0.793 0.648 0.605 1.4e-78
TAIR|locus:2091216 354 BCAT4 "branched-chain aminotra 0.810 0.666 0.543 8.6e-72
UNIPROTKB|A0R066 368 ilvE "Branched-chain-amino-aci 0.780 0.616 0.406 9.1e-45
UNIPROTKB|Q10399 368 ilvE "Branched-chain-amino-aci 0.773 0.611 0.414 1.2e-42
TIGR_CMR|GSU_0656 357 GSU_0656 "branched-chain amino 0.790 0.644 0.4 1.5e-42
TIGR_CMR|SO_0340 363 SO_0340 "branched-chain amino 0.824 0.661 0.351 1.5e-35
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
 Identities = 188/258 (72%), Positives = 224/258 (86%)

Query:    32 FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
             F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct:    26 FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query:    89 GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
             G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct:    85 GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query:   149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
             SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct:   145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query:   209 GNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268
             GNYFKEG+A LNLYVE+E+ RA PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV
Sbjct:   205 GNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSV 264

Query:   269 NKKNLEEVSSCNIFILKG 286
              KK LEE SSCN+F++KG
Sbjct:   265 KKKYLEEASSCNVFVVKG 282




GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0340 SO_0340 "branched-chain amino acid aminotransferase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.66780.95870.7190yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.921
4th Layer2.6.1.420.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
PLN02782 403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-151
PLN02259 388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-139
PLN03117 355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-124
PLN02883 384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-117
PRK13357 356 PRK13357, PRK13357, branched-chain amino acid amin 1e-111
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-84
TIGR01123 313 TIGR01123, ilvE_II, branched-chain amino acid amin 2e-80
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 5e-50
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 9e-45
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 1e-14
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 6e-12
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 3e-11
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 2e-10
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 3e-06
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 1e-05
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 1e-05
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 1e-04
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 0.001
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 0.001
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 0.002
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information
 Score =  429 bits (1105), Expect = e-151
 Identities = 179/270 (66%), Positives = 214/270 (79%), Gaps = 8/270 (2%)

Query: 18  QSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMY 77
            +  V S  + S         A +S       S+Y++      +DWDNLGFGL P DYMY
Sbjct: 34  SNSSVSSNPISSKAISLTRCDAVSS-------SSYTEVTELADIDWDNLGFGLVPTDYMY 86

Query: 78  TMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAI 136
            MKC+ D  F KG L R+G IELSPS+GVLNYGQGLFEG+KAYRKEDG ++LFRP++NAI
Sbjct: 87  IMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAI 146

Query: 137 RLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 196
           R++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGKGSLYIRPLL+GSG +LGLAPA
Sbjct: 147 RMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA 206

Query: 197 PEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKN 256
           PEYTFL++ SPVGNYFKEG+AP+NL VE+EFHRATPGG GGVK I NYA VLKA S AK 
Sbjct: 207 PEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKA 266

Query: 257 RGFSDVLYLDSVNKKNLEEVSSCNIFILKG 286
           +G+SDVLYLD V+KK LEEVSSCNIFI+K 
Sbjct: 267 KGYSDVLYLDCVHKKYLEEVSSCNIFIVKD 296


Length = 403

>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 291
PLN02883 384 Branched-chain amino acid aminotransferase 100.0
PLN02259 388 branched-chain-amino-acid aminotransferase 2 100.0
KOG0975 379 consensus Branched chain aminotransferase BCAT1, p 100.0
PLN02782 403 Branched-chain amino acid aminotransferase 100.0
PLN03117 355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357 356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123 313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PLN02845 336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK09266266 hypothetical protein; Provisional 99.98
PRK07546209 hypothetical protein; Provisional 99.9
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 99.84
PRK07101187 hypothetical protein; Provisional 99.72
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
Probab=100.00  E-value=3.6e-65  Score=490.50  Aligned_cols=278  Identities=60%  Similarity=0.997  Sum_probs=255.7

Q ss_pred             HHHh-hhhhhcccccccccCcccccchhhhhcccccCCCCCCCCCCccCCCCCCCCCCCcccCCceeEEEeec-ceEEcC
Q 022854           12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKG   89 (291)
Q Consensus        12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~ng   89 (291)
                      .||+ |.|++.++|+++..+.+.++.+++..++...+.......++...++||++|+||+++||||++++|.+ +.|.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~   81 (384)
T PLN02883          2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG   81 (384)
T ss_pred             chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence            3566 78999999999999999999888766654333333346677778999999999999999999999876 489999


Q ss_pred             eeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChhhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCC
Q 022854           90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW  169 (291)
Q Consensus        90 ~lvp~~~~~l~~~d~~l~YG~~vFEglkay~~~dG~i~lFr~d~H~~RL~~Sa~~L~mp~~~~e~~~~~i~~lv~~n~~~  169 (291)
                      +|+|+++++++|++++|||||+||||||+|+++||++++||+++|++||++||++|+||.++.++|.++|+++|+.|+.|
T Consensus        82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w  161 (384)
T PLN02883         82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW  161 (384)
T ss_pred             eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEEEEEecCCCccccCCCCcEEEEEEeecCCcccCCCcCEEEEEeccccccCCCCCCCCCcccChHHHHH
Q 022854          170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLK  249 (291)
Q Consensus       170 vP~~~~~~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~~G~~pv~l~v~~~~~Ra~p~g~g~~Kt~gNY~~~l~  249 (291)
                      ||+.+++++||||+++++++.+|+.++.+++++|+++|+++||++|.+++++.+++.++|++|++++++|++|||+++++
T Consensus       162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ll  241 (384)
T PLN02883        162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLE  241 (384)
T ss_pred             CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHHHH
Confidence            99988789999999999988899998889999999999999998888899999987789999999999999999999999


Q ss_pred             HHHHHHHCCCCEEEEEcCCCCCeEEEeCCeEEEEEECCEe
Q 022854          250 AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLG  289 (291)
Q Consensus       250 a~~~A~~~G~dd~L~Ld~~~~g~V~E~s~sNiF~vk~g~~  289 (291)
                      ++++|+++||||+||||..++|+|+|++++|||+|+++++
T Consensus       242 a~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l  281 (384)
T PLN02883        242 VMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNII  281 (384)
T ss_pred             HHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEE
Confidence            9999999999999999987668999999999999999875



>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
4dqn_A 345 Crystal Structure Of The Branched-Chain Aminotransf 1e-55
3uyy_A 358 Crystal Structures Of Branched-Chain Aminotransfera 2e-48
3ht5_A 368 Crystal Structure Of Ilve A Branched Chain Amino Ac 1e-45
3jz6_A 373 Crystal Structure Of Mycobacterium Smegmatis Branch 1e-45
3dtf_A 372 Structural Analysis Of Mycobacterial Branched Chain 1e-45
1ekf_A 365 Crystallographic Structure Of Human Branched Chain 2e-32
2hg8_A 365 Crystal Structure Of Cys315ala Mutant Of Human Mito 3e-32
2hgw_A 365 Crystal Structure Of Cys318ala Mutant Of Human Mito 3e-32
2hdk_A 365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 3e-32
2hhf_B 365 X-ray Crystal Structure Of Oxidized Human Mitochond 5e-31
2cog_A 386 Crystal Structure Of Oxidized Human Cytosolic Branc 1e-30
2hhf_A 365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-30
2abj_A 366 Crystal Structure Of Human Branched Chain Amino Aci 9e-30
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 3e-09
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 5e-09
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 2e-07
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 2e-04
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure

Iteration: 1

Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 106/223 (47%), Positives = 138/223 (61%), Gaps = 1/223 (0%) Query: 61 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120 +DW NLGF + Y + ++ G+L+ + +S SS L+YGQ FEG+KAYR Sbjct: 9 LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYR 68 Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 179 +DG + LFRP+ NA RLQ A+R+ MP D+FIDA KQ AN+ +VPP G G +LY Sbjct: 69 TKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLY 128 Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 239 +RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N ++D++ RA P G G K Sbjct: 129 LRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAK 188 Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF 282 NYA L A R FSDV+YLD +EEV S N F Sbjct: 189 VGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFF 231
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
3dth_A 372 Branched-chain amino acid aminotransferase; open t 1e-121
2a1h_A 365 Branched chain aminotransferase; fold type IV; HET 1e-116
2coi_A 386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-113
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 6e-18
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 8e-18
1iye_A309 Branched-chain amino acid aminotransferase; hexame 1e-17
3u0g_A328 Putative branched-chain amino acid aminotransfera; 2e-17
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 4e-16
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 6e-16
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 2e-14
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 5e-11
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 1e-10
3qqm_A221 MLR3007 protein; structural genomics, joint center 4e-10
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 3e-08
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
3dth_A 372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A 358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
3dtg_A 372 Branched-chain amino acid aminotransferase; open t 100.0
4dqn_A 345 Putative branched-chain amino acid aminotransfera; 100.0
2coi_A 386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2a1h_A 365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 99.97
3qqm_A221 MLR3007 protein; structural genomics, joint center 99.96
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 99.93
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 291
d2a1ha1 363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 1e-50
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 3e-26
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 1e-09
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 5e-08
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
 Score =  168 bits (426), Expect = 1e-50
 Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 1/231 (0%)

Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
              + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
            +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+
Sbjct: 81  GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYV 140

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFHRATPGGAGGVK 239
           RP+L+G+ P LG++        V   PVG YF    + P++L  +  F RA  GG G  K
Sbjct: 141 RPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYK 200

Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGLLGK 290
              NY P +     A  RG   VL+L   + +  E  +           G 
Sbjct: 201 LGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGV 251


>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
d2a1ha1 363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00  E-value=1.5e-54  Score=410.83  Aligned_cols=227  Identities=34%  Similarity=0.586  Sum_probs=212.3

Q ss_pred             CCCCCCCCCCcccCCceeEEEeecceEEcCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChhhHHHHHH
Q 022854           60 HMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQ  139 (291)
Q Consensus        60 ~~~~~~l~fg~~~td~m~~~~~~~~~w~ng~lvp~~~~~l~~~d~~l~YG~~vFEglkay~~~dG~i~lFr~d~H~~RL~  139 (291)
                      ..+.++|+||+++||||++++|+++.|.||+|+|++++.|||+|++|||||+||||||+|+++||++++||||+|++||+
T Consensus        20 ~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~   99 (363)
T d2a1ha1          20 PGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRML   99 (363)
T ss_dssp             CCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHH
T ss_pred             CCCcccCCCCCcccceEEEEEecCCeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCCccccCCCCcEEEEEEeecCCcccCC-CcC
Q 022854          140 TGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAP  218 (291)
Q Consensus       140 ~Sa~~L~mp~~~~e~~~~~i~~lv~~n~~~vP~~~~~~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~~G-~~p  218 (291)
                      +||++|+|+.++.+++.++|.++|+.|+.|+|+.++.++||||+++++++.+|+.|+..+.+++++.|...+++.+ .++
T Consensus       100 ~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~  179 (363)
T d2a1ha1         100 RSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTP  179 (363)
T ss_dssp             HHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCC
T ss_pred             HHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccccc
Confidence            9999999998899999999999999999999998888999999999988889999988888888888888877655 577


Q ss_pred             EEEEEeccccccCCCCCCCCCcccChHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEeCCeEEEEEECC
Q 022854          219 LNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGL  287 (291)
Q Consensus       219 v~l~v~~~~~Ra~p~g~g~~Kt~gNY~~~l~a~~~A~~~G~dd~L~Ld~~~~g~V~E~s~sNiF~vk~g  287 (291)
                      +.+.+.+.++|.++.+++..|.++||+++++|.++|+++||||+||||.. +|+|+|++++|+|+++++
T Consensus       180 ~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~  247 (363)
T d2a1ha1         180 VSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTH  247 (363)
T ss_dssp             EEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEEC
T ss_pred             eeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEec
Confidence            88888878999999999999999999999999999999999999999854 589999999999999765



>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure