Citrus Sinensis ID: 022874

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MLLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL
Secondary Structure (PSIPRED)
cEEEEccccccccccEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEHHHHHHcccEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHcccccccHEEEEccccccccccccccHHcccccccccccccccHcccccccEEEEccccccccHHHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccEEHEcccccccccccccHHHHHHccccccEEEEEEEEEEc
Coil and Loop (DISEMBL)
MLLVILPFFFFQLCTVVKYTPDQIRNMEEsvrirsdnepMALVKLVNGLkqefsrdesvfELPRAVKLRMIDEILRRLqssdvkgnvSAQREAVESWRREKLEEAKQlsigrqginSTILQEEARMLVRVLESDWAALSEEIglwipteiihkehgdkpkgvededldedvlpgrppppechaelhtdydGVAIRWglthhrdsAADCCQACIEQAkrakpgqmkcniwvycpaetgchspdkyeHKYQECWLKYaekpklnfkdrysekyrnahpaaplvvpwvsgvvsl
Flexible Loop (DISEMBL)
MLLVILPFFFFQLCTVVKYTPDQIRNMEEsvrirsdnepMALVKLVNGlkqefsrdesvfelpraVKLRMIDEILRrlqssdvkgnvsAQREAVESWRREKLeeakqlsigrqginstiLQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAkrakpgqmkCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRnahpaaplvvpwvsgvvsl
Low Complexity Region (SEG)
MLLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGvededldedvlPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL
Disordered region (IsUnstruct)
*LLVILPFFFFQLCTVVKYTPDQIRN*************MALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRR**********************************RQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIH******************************AELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGV***
Disordered Region (DISOPRED)
*LLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLK******************RMIDEILRRLQ**************************************************VLESDWAALSEEIGLWIPTEI****************************PECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKP******************APLVVPWVSGVVSL
Disordered Region (DISEMBL)
MLLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSS**************SWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL
Disordered Region (DISPRO)
MLLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEH*********EDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLLVILPFFFFQLCTVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
255538360	321	conserved hypothetical protein [Ricinus	0.941	0.853	0.702	1e-111
225458579	321	PREDICTED: uncharacterized protein LOC10	0.920	0.834	0.681	1e-109
224137454	321	predicted protein [Populus trichocarpa]	0.938	0.850	0.690	1e-108
224063535	321	predicted protein [Populus trichocarpa]	0.938	0.850	0.68	1e-108
449470184	327	PREDICTED: uncharacterized protein LOC10	0.938	0.834	0.641	1e-102
356552196	330	PREDICTED: uncharacterized protein LOC10	0.938	0.827	0.639	1e-100
357437891	339	hypothetical protein MTR_1g019780 [Medic	0.934	0.802	0.633	1e-100
356510377	320	PREDICTED: uncharacterized protein LOC10	0.938	0.853	0.613	2e-98
22329116	328	uncharacterized protein [Arabidopsis tha	0.938	0.832	0.637	3e-98
297802666	328	hypothetical protein ARALYDRAFT_913084 [	0.938	0.832	0.630	5e-98

>gi|255538360|ref|XP_002510245.1| conserved hypothetical protein [Ricinus communis] gi|223550946|gb|EEF52432.1| conserved hypothetical protein [Ricinus communis]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/276 (70%), Positives = 228/276 (82%), Gaps = 2/276 (0%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            V KYT DQI  MEES+RIR   EP+ LV+LV  LK+E  RDE V ELP  VK R+ DE+
Sbjct: 47  NVAKYTLDQISKMEESIRIRKTKEPLQLVQLVKELKEELKRDEKVVELPVDVKQRITDEL 106

Query: 75  LRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESD 134
           L RL+S D   N+  QREAVESWR+EKL+E KQL+ G  G+NSTILQ+EA MLVR LESD
Sbjct: 107 LLRLRSLDANANIKEQREAVESWRKEKLQEVKQLTYGAGGLNSTILQDEAAMLVRALESD 166

Query: 135 WAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAI 194
           WA LSE +GLWIPTEII++EH DKP+G E+ +  E++LPGRP PPECHAELHTDYDG A+
Sbjct: 167 WAVLSENMGLWIPTEIINEEHDDKPEGEEETE--EEILPGRPVPPECHAELHTDYDGAAV 224

Query: 195 RWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK 254
           RWGLTHH++SAADCCQAC++QAK AKPG+ KCNIWV+CP+ETGC+SPD Y+HK QECWLK
Sbjct: 225 RWGLTHHKESAADCCQACLDQAKHAKPGEKKCNIWVFCPSETGCYSPDIYQHKNQECWLK 284

Query: 255 YAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           YAE P+LNFKD+YSE YRN+HP APLVVPWVSGVVS
Sbjct: 285 YAETPRLNFKDKYSESYRNSHPNAPLVVPWVSGVVS 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458579|ref|XP_002284610.1| PREDICTED: uncharacterized protein LOC100248838 [Vitis vinifera] gi|302142335|emb|CBI19538.3| unnamed protein product [Vitis vinifera]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/276 (68%), Positives = 225/276 (81%), Gaps = 8/276 (2%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
           + VKYTPDQIR MEES+RIR  +EP+ LVKLV  +++E SR+ S  ELP+ +K ++ DEI
Sbjct: 53  SAVKYTPDQIRKMEESIRIRRASEPVELVKLVKEVEKELSREASEVELPQPIKQKITDEI 112

Query: 75  LRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESD 134
           L+RL+S D   NVS QREAVESWR+EK+EE K+       +NSTI  EEA MLVR LES+
Sbjct: 113 LQRLKSLDHNSNVSVQREAVESWRKEKIEEVKK------SMNSTISPEEAGMLVRALESN 166

Query: 135 WAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAI 194
           WA L EEIGLW+PTE+I+KEH DKP+G  +E+ D+ ++PGRP PPECHAE+HTDYDG A+
Sbjct: 167 WAVLFEEIGLWMPTEVIYKEHDDKPEG--EEEFDDGIIPGRPVPPECHAEIHTDYDGAAV 224

Query: 195 RWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK 254
           RWGLTHH+DSAADCCQAC +QA  AKPG+ KCNIWVYCP+ETGC SPD YEHK  ECWLK
Sbjct: 225 RWGLTHHKDSAADCCQACFDQANHAKPGEKKCNIWVYCPSETGCFSPDIYEHKNGECWLK 284

Query: 255 YAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           YAEKP+LNFKD+YSE YRNAHP+APL VPWVSGV S
Sbjct: 285 YAEKPRLNFKDKYSESYRNAHPSAPLFVPWVSGVAS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137454|ref|XP_002327130.1| predicted protein [Populus trichocarpa] gi|222835445|gb|EEE73880.1| predicted protein [Populus trichocarpa]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/275 (69%), Positives = 229/275 (83%), Gaps = 2/275 (0%)

Query: 16  VVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEIL 75
           VVKYTPDQ+R MEES+RIR   EP+ LVK+V  LK+EF+R E V  LP+ V  R+ DEIL
Sbjct: 48  VVKYTPDQVRKMEESIRIRRAKEPLELVKIVKELKEEFNRGEMVAGLPKEVTGRITDEIL 107

Query: 76  RRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDW 135
           +RL+S +   N+S QR+A+ESWR+EKL+E KQL  G  G+NS+IL++EA ML R LESDW
Sbjct: 108 QRLRSLNANANISEQRDAIESWRKEKLQEVKQLVHGTGGLNSSILKQEAGMLERALESDW 167

Query: 136 AALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIR 195
           A LSE IGLW+P EIIH+EH DKP+   +ED +E+VLPGRP PPECHAELHTDYDG A+R
Sbjct: 168 AVLSENIGLWVPAEIIHQEHNDKPE--GEEDPEEEVLPGRPLPPECHAELHTDYDGAAVR 225

Query: 196 WGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKY 255
           WGL+HH++SAADCCQAC++QAK AKPG+ KCN WVYCP+ETGC SPD Y+HK QECWLKY
Sbjct: 226 WGLSHHKESAADCCQACLDQAKYAKPGEKKCNTWVYCPSETGCFSPDIYQHKNQECWLKY 285

Query: 256 AEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           AEKPKLNFKD+YSE YR++HP APL+VPWVSGVVS
Sbjct: 286 AEKPKLNFKDKYSESYRDSHPNAPLIVPWVSGVVS 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063535|ref|XP_002301192.1| predicted protein [Populus trichocarpa] gi|222842918|gb|EEE80465.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/275 (68%), Positives = 227/275 (82%), Gaps = 2/275 (0%)

Query: 16  VVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEIL 75
           VVKYTPDQIR MEES+RIR   EP+ LVK+V  LK+EF+R+E+V ELP+ VK ++ DEIL
Sbjct: 48  VVKYTPDQIRKMEESIRIRRAKEPLELVKIVKELKEEFNREETVIELPKEVKNKITDEIL 107

Query: 76  RRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDW 135
            RL+S +   N+S QR AVE WR+EKL+E K L+   +G+ S+IL+EEA +LVR LES W
Sbjct: 108 ERLRSLNANANISEQRNAVEKWRKEKLQEVKLLARETEGLTSSILKEEAGILVRALESYW 167

Query: 136 AALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAIR 195
           A LSE IGLW+P E+IH+EH DK     +E+ +E+VLPGRP PPECHAELHTDYDG A+R
Sbjct: 168 AVLSENIGLWVPAEVIHQEHDDK--PEGEEEPEEEVLPGRPLPPECHAELHTDYDGAAVR 225

Query: 196 WGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKY 255
           WGL+HH++SAADCCQAC++QAK AKPG+ KCN WVYCP+ETGC SPD Y+HK QECWLKY
Sbjct: 226 WGLSHHKESAADCCQACLDQAKYAKPGEKKCNTWVYCPSETGCFSPDIYQHKNQECWLKY 285

Query: 256 AEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           AEKPKLNFKDRYSE YR++HP APL+VPWVSGVVS
Sbjct: 286 AEKPKLNFKDRYSESYRDSHPNAPLIVPWVSGVVS 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470184|ref|XP_004152798.1| PREDICTED: uncharacterized protein LOC101221262 [Cucumis sativus] gi|449496111|ref|XP_004160043.1| PREDICTED: uncharacterized protein LOC101226883 [Cucumis sativus]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/276 (64%), Positives = 220/276 (79%), Gaps = 3/276 (1%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
           +VVKYTPDQIR MEE VR+R  +EP+ L+KLV  LK EFS++++V ELP  +K ++ +EI
Sbjct: 54  SVVKYTPDQIRKMEEFVRVRRASEPVELIKLVKELK-EFSQEQTVDELPLPLKQKITEEI 112

Query: 75  LRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESD 134
           L +L+S +   N + QREAVE WR+EKLEEA +L   +   NST+  E+A  LV+ LE+D
Sbjct: 113 LLKLRSLNGSSNSTQQREAVEIWRKEKLEEANKLITEQMLENSTLSFEDAGTLVKALEAD 172

Query: 135 WAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAI 194
           W   SE IGLWIPTE++H EH DKP+GV++   D+++LPGRP PPEC+AELHTDYDG A+
Sbjct: 173 WQVFSEAIGLWIPTEVVHTEHDDKPEGVDE--FDDEILPGRPVPPECNAELHTDYDGAAV 230

Query: 195 RWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK 254
           RWGLTHH++SAADCCQAC++ AKRA+PG  KCNIWVYCP+ETGCHSPD YEHK+ ECWLK
Sbjct: 231 RWGLTHHKESAADCCQACLDHAKRAQPGDRKCNIWVYCPSETGCHSPDIYEHKHMECWLK 290

Query: 255 YAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           YAE PKLNFK  Y + YRN+HP AP VVPWVSGVVS
Sbjct: 291 YAENPKLNFKTNYPQSYRNSHPTAPFVVPWVSGVVS 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552196|ref|XP_003544455.1| PREDICTED: uncharacterized protein LOC100778720 [Glycine max]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/283 (63%), Positives = 222/283 (78%), Gaps = 10/283 (3%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            +V Y PDQIR MEES RIR   +P+ L+KLV   + EFS +  V ELPR +K ++IDE+
Sbjct: 50  NIVVYRPDQIRKMEESNRIRKAYKPVELMKLVKEFEGEFSGETVVVELPRHLKQKIIDEV 109

Query: 75  LRRLQS-SDVKGNVS------AQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARML 127
           L+RL S +    N+S       +REA+E+WR+EKLEE K L++ R   NSTI  EEA ML
Sbjct: 110 LQRLGSLNGSSKNISHSQVMAKEREAIENWRKEKLEEVK-LAVVRGTSNSTIPHEEAGML 168

Query: 128 VRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHT 187
           VR LESDWA LSEEIGLWIP E+ ++EH DKP+G  +  ++E+VLPGRP PPEC+ ELHT
Sbjct: 169 VRALESDWAVLSEEIGLWIPIEVANEEHNDKPEGASE--IEEEVLPGRPLPPECNPELHT 226

Query: 188 DYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHK 247
           DYDG A+RWGLTHH+DSAADCCQAC++QAKRAK G+ KCNIWVYCP++ GCHSPD Y+HK
Sbjct: 227 DYDGTAVRWGLTHHKDSAADCCQACLDQAKRAKEGENKCNIWVYCPSQFGCHSPDIYQHK 286

Query: 248 YQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           +QECWLKYAEKPKLNFKDRY E YRN+H +AP++VPW SGVVS
Sbjct: 287 HQECWLKYAEKPKLNFKDRYPEWYRNSHLSAPVIVPWASGVVS 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437891|ref|XP_003589221.1| hypothetical protein MTR_1g019780 [Medicago truncatula] gi|355478269|gb|AES59472.1| hypothetical protein MTR_1g019780 [Medicago truncatula]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/284 (63%), Positives = 222/284 (78%), Gaps = 12/284 (4%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            +V Y PDQIR MEES RIR+  +P+ L+KLV  L+ EFS   +  ELP+ +K ++IDE+
Sbjct: 59  NIVVYKPDQIRKMEESNRIRTSYKPVKLMKLVKELEGEFSIQNTEVELPQHLKQKIIDEV 118

Query: 75  LRRLQSSDVKGN-------VSAQREAVESWRREKLEEAKQLSIGRQGI-NSTILQEEARM 126
           L+RL S + + N       ++ +R+AVE+WR+EKLEE K +S G  GI NSTI  EEA M
Sbjct: 119 LQRLVSLNSRSNNGSHSQGIAMERDAVENWRKEKLEEVKLVSAG--GISNSTISHEEAGM 176

Query: 127 LVRVLESDWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELH 186
           LV+ LESDWA L+EEIGLWIP E+++ EH DKP GVED  L+E+VLPGR  PPEC  ELH
Sbjct: 177 LVKALESDWAVLAEEIGLWIPVEVVNVEHNDKPDGVED--LEEEVLPGRALPPECKPELH 234

Query: 187 TDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEH 246
           TDYDG A+RWGLTHH+DSAADCCQAC++ AKRAK G+ KCNIWVYCP+E GCHSPD Y+H
Sbjct: 235 TDYDGSAVRWGLTHHKDSAADCCQACLDHAKRAKEGEKKCNIWVYCPSEFGCHSPDIYQH 294

Query: 247 KYQECWLKYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           K+ ECWLKYAEKPKLNFKDRY E YRN+ P+AP++VPW SGVV+
Sbjct: 295 KHMECWLKYAEKPKLNFKDRYPEWYRNSRPSAPVIVPWASGVVA 338

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510377|ref|XP_003523915.1| PREDICTED: uncharacterized protein LOC100793928 [Glycine max]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/277 (61%), Positives = 219/277 (79%), Gaps = 4/277 (1%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            V  Y+PDQIR ME S++IR + +P+ L+K V  L+ EFS +    ELPR +K  +IDEI
Sbjct: 46  NVALYSPDQIRKMELSIQIRGEFKPVELIKWVKALEGEFSSETVAVELPRHLKQNIIDEI 105

Query: 75  LRRLQSSDV-KGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLES 133
           L+RL+S +  + +++ +RE VESWR+EKLEE K  ++ +   NSTI  EEA MLVR LES
Sbjct: 106 LQRLRSLNFSRTDIAKEREVVESWRKEKLEEVKS-ALVKGTSNSTIPHEEAGMLVRALES 164

Query: 134 DWAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVA 193
           +WA L EEIGLWIP ++ ++EH DKP+G E+   ++++LPGRP  PECHAELHTDYDG A
Sbjct: 165 NWAVLCEEIGLWIPAQVSNEEHDDKPEGAEE--FEDEILPGRPVSPECHAELHTDYDGAA 222

Query: 194 IRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWL 253
           +RWGLT H+DSAADCCQAC++ AK AK G+ KCNIWVYCP+E GCHSPD Y+HK+QECWL
Sbjct: 223 VRWGLTFHKDSAADCCQACLDHAKHAKEGEKKCNIWVYCPSEFGCHSPDIYQHKHQECWL 282

Query: 254 KYAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           KYAEKP+LNFKD+Y E YRN+HP+AP++VPWVSGV+S
Sbjct: 283 KYAEKPRLNFKDKYPESYRNSHPSAPVIVPWVSGVIS 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329116|ref|NP_195064.2| uncharacterized protein [Arabidopsis thaliana] gi|17381263|gb|AAL36050.1| AT4g33380/F17M5_140 [Arabidopsis thaliana] gi|20453385|gb|AAM19931.1| AT4g33380/F17M5_140 [Arabidopsis thaliana] gi|332660817|gb|AEE86217.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 176/276 (63%), Positives = 214/276 (77%), Gaps = 3/276 (1%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            VVKYT D+IR MEES+RIR   EP  +++LV  LK E S  ES  EL   VK +++DEI
Sbjct: 55  NVVKYTADEIRKMEESIRIRRSKEPTLILQLVKKLKHEVSTAESSTELSPNVKHKLVDEI 114

Query: 75  LRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESD 134
           L+RL+S + K NV+  RE VE+WR EKLEEAK+L  G+ G+NST++ EEA MLVR LE +
Sbjct: 115 LQRLKSFEDKSNVTQLREVVETWRNEKLEEAKELIQGQNGVNSTLIVEEAGMLVRALELE 174

Query: 135 WAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAI 194
           W  LSEEIG W+P E+ + EH DKP+    E+  E++L GRP P  C+AELHTDY G A+
Sbjct: 175 WDVLSEEIGFWLPAEVTNVEHDDKPE---GEEEPEEILAGRPVPAVCNAELHTDYGGAAV 231

Query: 195 RWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK 254
           RWGLTHH++SAADCCQAC++QAKRAKPG+ +CNIWVYCP+E GC SPD YEHK+QECWLK
Sbjct: 232 RWGLTHHKESAADCCQACLDQAKRAKPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWLK 291

Query: 255 YAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           YAEKPK NFKDRYSE YRN HP AP +VPWVSGVV+
Sbjct: 292 YAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVVT 327

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802666|ref|XP_002869217.1| hypothetical protein ARALYDRAFT_913084 [Arabidopsis lyrata subsp. lyrata] gi|297315053|gb|EFH45476.1| hypothetical protein ARALYDRAFT_913084 [Arabidopsis lyrata subsp. lyrata]

 Score =  363 bits (932), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 174/276 (63%), Positives = 214/276 (77%), Gaps = 3/276 (1%)

Query: 15  TVVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEI 74
            VVKYT D++R MEES+RIR   EP  LV+LV  LK E +  ES  EL   VK +++DEI
Sbjct: 55  NVVKYTADEVRKMEESIRIRRSKEPTLLVQLVKKLKHEVATAESNTELSPNVKHKLVDEI 114

Query: 75  LRRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESD 134
           L+RL+  D K NV+  RE VE+WR EKLEEAK+L  G+ G+NST++ EEA MLVR LE +
Sbjct: 115 LQRLKRFDQKSNVTQLREVVETWRSEKLEEAKELIQGQNGVNSTLIVEEAGMLVRALELE 174

Query: 135 WAALSEEIGLWIPTEIIHKEHGDKPKGVEDEDLDEDVLPGRPPPPECHAELHTDYDGVAI 194
           W  LSEEIG W+P E+ ++EH DKP+    E+  E++L GRP P  C+AELHTDY G A+
Sbjct: 175 WDVLSEEIGFWLPAEVTNEEHDDKPE---GEEEPEEILAGRPVPAVCNAELHTDYGGAAV 231

Query: 195 RWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK 254
           RWGLTHH++SAADCCQAC++QAKRA+PG+ +CNIWVYCP+E GC SPD YEHK+QECWLK
Sbjct: 232 RWGLTHHKESAADCCQACLDQAKRARPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWLK 291

Query: 255 YAEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
           YAEKPK NFKDRYSE YRN HP AP +VPWVSGV++
Sbjct: 292 YAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVIT 327

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2119191	328	AT4G33380 [Arabidopsis thalian	0.934	0.829	0.632	4.2e-95
TAIR|locus:4010713411	152	AT1G04555 "AT1G04555" [Arabido	0.309	0.592	0.271	8.2e-05

TAIR|locus:2119191 AT4G33380 [Arabidopsis thaliana (taxid:3702)]

 Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
 Identities = 174/275 (63%), Positives = 209/275 (76%)

Query:    16 VVKYTPDQIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEIL 75
             VVKYT D+IR MEES+RIR   EP  +++LV  LK E S  ES  EL   VK +++DEIL
Sbjct:    56 VVKYTADEIRKMEESIRIRRSKEPTLILQLVKKLKHEVSTAESSTELSPNVKHKLVDEIL 115

Query:    76 RRLQSSDVKGNVSAQREAVESWRREKLEEAKQLSIGRQGINSTILQEEARMLVRVLESDW 135
             +RL+S + K NV+  RE VE+WR EKLEEAK+L  G+ G+NST++ EEA MLVR LE +W
Sbjct:   116 QRLKSFEDKSNVTQLREVVETWRNEKLEEAKELIQGQNGVNSTLIVEEAGMLVRALELEW 175

Query:   136 AALSEEIGLWIPTEIIHKEHGDKPKGXXXXXXXXXXXPGRPPPPECHAELHTDYDGVAIR 195
               LSEEIG W+P E+ + EH DKP+G            GRP P  C+AELHTDY G A+R
Sbjct:   176 DVLSEEIGFWLPAEVTNVEHDDKPEGEEEPEEILA---GRPVPAVCNAELHTDYGGAAVR 232

Query:   196 WGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKY 255
             WGLTHH++SAADCCQAC++QAKRAKPG+ +CNIWVYCP+E GC SPD YEHK+QECWLKY
Sbjct:   233 WGLTHHKESAADCCQACLDQAKRAKPGETRCNIWVYCPSEFGCFSPDIYEHKHQECWLKY 292

Query:   256 AEKPKLNFKDRYSEKYRNAHPAAPLVVPWVSGVVS 290
             AEKPK NFKDRYSE YRN HP AP +VPWVSGVV+
Sbjct:   293 AEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVVT 327

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:4010713411 AT1G04555 "AT1G04555" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 25/92 (27%), Positives = 51/92 (55%)

Query:    23 QIRNMEESVRIRSDNEPMALVKLVNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSD 82
             Q+R ++E+  +R   +P+ L++ V  ++QE S  +   E  + VK     ++ +RL+   
Sbjct:    53 QLRYIKEAEELRLKMQPLELIRRVREIEQEASAGQET-EQQKDVKQTTAVDLSKRLKDFR 111

Query:    83 VKGNVSAQREAVESWRREKLEEAKQLSIGRQG 114
                + S+ + A+E WR+ K+E A+Q  + + G
Sbjct:   112 ALNDASSLK-ALEEWRKRKMERARQRDLEKTG 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      291       280   0.00082  115 3  11 22  0.36    34
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  242 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.64u 0.17s 24.81t   Elapsed:  00:00:01
  Total cpu time:  24.65u 0.17s 24.82t   Elapsed:  00:00:01
  Start:  Fri May 10 23:44:09 2013   End:  Fri May 10 23:44:10 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
pfam14295	48	pfam14295, PAN_4, PAN domain	5e-07

>gnl|CDD|222657 pfam14295, PAN_4, PAN domain

 Score = 45.4 bits (108), Expect = 5e-07
 Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 20/68 (29%)

Query: 187 TDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEH 246
           TDY G  +R G     DS   CC AC   +         C  W Y               
Sbjct: 1   TDYPGGDLRSG-PVSVDSPEACCAACAADS--------GCRAWTYVDPA----------- 40

Query: 247 KYQECWLK 254
               CWLK
Sbjct: 41  SGGTCWLK 48

Length = 48

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PF14295	51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	98.43
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	95.91
smart00223	79	APPLE APPLE domain. Four-fold repeat in plasma kal	95.39

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A

Probab=98.43  E-value=1e-07  Score=65.27  Aligned_cols=51  Identities=33%  Similarity=0.682  Sum_probs=18.8

Q ss_pred             ccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccc
Q 022874          187 TDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK  254 (291)
Q Consensus       187 tdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK  254 (291)
                      |||.|..+..+ .....|+++|+++|.+        ..+|+.|+|.+.  ++.+      ..+.||||
T Consensus         1 ~d~~G~dl~~~-~~~~~s~~~C~~~C~~--------~~~C~~~~~~~~--~~~~------~~~~C~LK   51 (51)
T PF14295_consen    1 TDYPGGDLRSF-PVTASSPEECQAACAA--------DPGCQAFTFNPP--GCPS------SSGRCYLK   51 (51)
T ss_dssp             ------------------HHHHHHHHHT--------STT--EEEEETT--EE----------------
T ss_pred             Ccccccccccc-cccCCCHHHHHHHccC--------CCCCCEEEEECC--Cccc------ccccccCC
Confidence            68899988876 3478999999999997        468999999996  2322      46899998

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=95.91  E-value=0.0091  Score=44.69  Aligned_cols=56  Identities=29%  Similarity=0.601  Sum_probs=43.2

Q ss_pred             CCcccccc-cccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccccc
Q 022874          178 PPECHAEL-HTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYA  256 (291)
Q Consensus       178 ~~~C~~e~-htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK~~  256 (291)
                      +..|+... |++|.|.-+.   .....|+++|+++|..        ...|..|.|=..             .+.||||..
T Consensus         2 ~~~C~~~~~~~~~~g~d~~---~~~~~s~~~Cq~~C~~--------~~~C~afT~~~~-------------~~~C~lk~~   57 (73)
T cd01100           2 PSSCFRQGSNVDFRGGDLS---TVFASSAEQCQAACTA--------DPGCLAFTYNTK-------------SKKCFLKSS   57 (73)
T ss_pred             CcccccccCCCccccCCcc---eeecCCHHHHHHHcCC--------CCCceEEEEECC-------------CCeEEcccC
Confidence            45677765 9999996553   2347899999999998        468999999432             479999987


Q ss_pred             C
Q 022874          257 E  257 (291)
Q Consensus       257 ~  257 (291)
                      .
T Consensus        58 ~   58 (73)
T cd01100          58 E   58 (73)
T ss_pred             C
Confidence            4

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>smart00223 APPLE APPLE domain

Probab=95.39  E-value=0.024  Score=44.34  Aligned_cols=53  Identities=25%  Similarity=0.446  Sum_probs=42.5

Q ss_pred             ccccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccccc
Q 022874          183 AELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYA  256 (291)
Q Consensus       183 ~e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK~~  256 (291)
                      +..|+||.|.-+.   .-...++.+|+..|..+        .+|-.|.|=.....+          ..||||..
T Consensus         5 ~~~~~df~G~Dl~---~~~~~~~~~Cq~~Ct~~--------~~C~~FTf~~~~~~~----------~~C~LK~s   57 (79)
T smart00223        5 IYKNVDFRGSDIN---TVYVPSAQVCQKRCTSH--------PRCLFFTFSTNEPPE----------EKCLLKDS   57 (79)
T ss_pred             hccCccccCceee---eeecCCHHHHHHhhcCC--------CCccEEEeeCCCCCC----------CEeEeCcC
Confidence            3578999988663   44689999999999985        589999999986432          17999987

Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 3e-06
 Identities = 45/317 (14%), Positives = 92/317 (29%), Gaps = 91/317 (28%)

Query: 2   LLV--------ILPFFFFQLCTVVKYTPDQ----IRNMEESVRIRSDNEPMALVKLVNGL 49
           LLV            F    C ++  T  +      +   +  I  D+  M L    + +
Sbjct: 247 LLVLLNVQNAKAWNAFNLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP--DEV 303

Query: 50  KQEFSR--DESVFELPRAVK------LRMIDEILRRLQSSDVKGNVSAQREAVESWRR-- 99
           K    +  D    +LPR V       L +I E +R                  ++W+   
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD------------GLATWDNWKHVN 351

Query: 100 -EKLEEAKQLSIG-------RQGINS-TILQEEARMLVRVLESDWAALSEEIGLWIPTEI 150
            +KL    + S+        R+  +  ++    A +   +L   W  + +         +
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS----DVMVV 407

Query: 151 IHKEHGDKPKGVEDEDLDEDV--LPGRPPPPECHAELHTDYDGVAIRWGLTHHRDSAADC 208
           ++K H      + ++   E    +P        + EL    +          HR      
Sbjct: 408 VNKLHK---YSLVEKQPKESTISIPS------IYLELKVKLENEY-----ALHR------ 447

Query: 209 CQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKY-------QECWLKYAEKPKL 261
             + ++     K          +   +      D+Y + +        E   +      +
Sbjct: 448 --SIVDHYNIPK---------TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496

Query: 262 NFKDRYSE-KYRNAHPA 277
               R+ E K R+   A
Sbjct: 497 FLDFRFLEQKIRHDSTA 513

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	94.58
4a5v_A	161	MIC4, micronemal protein 4; adhesion; NMR {Toxopla	94.56
2yil_A	138	Microneme antigen L2; sugar binding protein, apple	94.16
2yil_A	138	Microneme antigen L2; sugar binding protein, apple	94.07
4a5v_A	161	MIC4, micronemal protein 4; adhesion; NMR {Toxopla	93.71
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	93.35

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=94.58  E-value=0.035  Score=55.23  Aligned_cols=65  Identities=20%  Similarity=0.454  Sum_probs=48.1

Q ss_pred             CCCcccc--cccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccc
Q 022874          177 PPPECHA--ELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK  254 (291)
Q Consensus       177 ~~~~C~~--e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK  254 (291)
                      .++.|+.  ..++||.|.-+.-   ....|+++||..|.++        .+|-.|.|=....-  +    ....+.||||
T Consensus       106 ~~~~C~~~~~~~~d~~G~d~~~---~~~~s~~~C~~~C~~~--------~~C~~fTy~~~~~~--~----~~~~~~C~LK  168 (625)
T 2f83_A          106 QISACNKDIYVDLDMKGINYNS---SVAKSAQECQERCTDD--------VHCHFFTYATRQFP--S----LEHRNICLLK  168 (625)
T ss_dssp             CCCCCCCCCEEEEEEECEEEEE---EECSCHHHHHHHHHTS--------SSCSEEEEECSSCS--C----SSSTTEEEEE
T ss_pred             ChhcCchhhccccceecceeee---EeeCCHHHHHHhccCC--------CCCcEEEecCCccc--C----CCCCceeEec
Confidence            4557864  5899999976642   5678999999999984        68999999775421  1    1245789999


Q ss_pred             ccCC
Q 022874          255 YAEK  258 (291)
Q Consensus       255 ~~~~  258 (291)
                      ....
T Consensus       169 ~s~~  172 (625)
T 2f83_A          169 HTQT  172 (625)
T ss_dssp             ECSS
T ss_pred             cCcC
Confidence            9754

>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}

Probab=94.56  E-value=0.054  Score=45.81  Aligned_cols=67  Identities=24%  Similarity=0.416  Sum_probs=48.9

Q ss_pred             ccccCCC-CCCCCccccccccccccc-ccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccC
Q 022874          168 DEDVLPG-RPPPPECHAELHTDYDGV-AIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYE  245 (291)
Q Consensus       168 ~~~~~~g-~p~~~~C~~e~htdy~G~-aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~  245 (291)
                      ..+++-| +.-++.|+. .++||.|. -|.  ......++.+|+++|.+        +.+|..|+|=.            
T Consensus        70 ~~g~iSG~k~C~~~C~~-~~vD~~G~~dl~--~~~~~~s~~~Cq~~C~~--------~~~C~~fTy~~------------  126 (161)
T 4a5v_A           70 LTGGKTASRSCDRSCFE-QHVSYEGAPDVM--TAMVTSQSADCQAACAA--------DPSCEIFTYNE------------  126 (161)
T ss_dssp             CTTEEEEESCCCCTTCE-ESEEECSSCBSS--CCCBCSCHHHHHHHHHH--------CTTCCEEEEET------------
T ss_pred             cCCceeCCCcCCcchhh-CCCcccCchhcc--ccccCCCHHHHHHHccc--------CCCCCEEEeeC------------
Confidence            3455555 222246776 89999998 442  33567899999999998        46899999973            


Q ss_pred             CCCCcccccccCC
Q 022874          246 HKYQECWLKYAEK  258 (291)
Q Consensus       246 ~~~geCWLK~~~~  258 (291)
                       ..+.||||....
T Consensus       127 -~~~~C~LK~~~~  138 (161)
T 4a5v_A          127 -HDQKCTFKGRGF  138 (161)
T ss_dssp             -TTTEEEEECTTT
T ss_pred             -CCCeeEeCCCCC
Confidence             357999998865

>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*

Probab=94.16  E-value=0.024  Score=47.51  Aligned_cols=65  Identities=14%  Similarity=0.258  Sum_probs=48.3

Q ss_pred             ccccCCCCCC-CCcccccccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCC
Q 022874          168 DEDVLPGRPP-PPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEH  246 (291)
Q Consensus       168 ~~~~~~g~p~-~~~C~~e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~  246 (291)
                      ..+++.|... .+.| .+.+.||.|..+.- ......|+.+|.++|.+        +.+|..|.|=.             
T Consensus        68 ~~g~vSGpk~C~~~C-~~~~vdy~G~d~~~-~~~s~~~a~~CQ~~C~~--------~~~C~~fTf~~-------------  124 (138)
T 2yil_A           68 YTGDMTGPRSCEHNC-SDACWMDGNNPLAV-WDYSGQPPALCWAACMG--------TPGCDLYTFQG-------------  124 (138)
T ss_dssp             CTTEEEEESCTTCCC-CSSEETTCCCCSEE-EECTTCCTHHHHHHHHT--------STTCCEEECGG-------------
T ss_pred             cCCceecCCcCcccH-HhcCCCccCccccc-cccccCCHHHHHHHhCC--------CCCCcEEEEeC-------------
Confidence            4567777332 3467 68999999987754 33344689999999998        46899999854             


Q ss_pred             CCCcccccccC
Q 022874          247 KYQECWLKYAE  257 (291)
Q Consensus       247 ~~geCWLK~~~  257 (291)
                        +.||||..+
T Consensus       125 --~tC~lk~~d  133 (138)
T 2yil_A          125 --MTCKLYSQT  133 (138)
T ss_dssp             --GEEEEECCC
T ss_pred             --CeeEEECCc
Confidence              489999764

>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*

Probab=94.07  E-value=0.032  Score=46.78  Aligned_cols=58  Identities=24%  Similarity=0.386  Sum_probs=39.8

Q ss_pred             CCCcccccccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccccc
Q 022874          177 PPPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYA  256 (291)
Q Consensus       177 ~~~~C~~e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK~~  256 (291)
                      ++-.|-  +|...+|..+.--..-.+.|+++|.+.|+++        .+|..|.|=.+             -+.||||..
T Consensus         5 ~~~~c~--~h~~n~G~~~~~i~~~~v~Sa~~Cq~~C~~~--------~~C~~FTf~~~-------------~k~C~LK~~   61 (138)
T 2yil_A            5 LDVSCF--AHDKNIGSRTEQLSVVHVASAQDCMKECQAL--------PTCSHFTYNKN-------------SKKCHLKAG   61 (138)
T ss_dssp             CCCTTS--CSSSCEEECSCEEEEEECSSHHHHHHHHHHS--------TTCCEEEEETT-------------TCEEEEECS
T ss_pred             eeeeee--cccCccCcchhcccccCCCCHHHHHHHccCC--------CCCCEEEEECC-------------CCEEEeccC
Confidence            344454  2344445544322345679999999999985        58999999554             268999975


Q ss_pred             C
Q 022874          257 E  257 (291)
Q Consensus       257 ~  257 (291)
                      .
T Consensus        62 ~   62 (138)
T 2yil_A           62 A   62 (138)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}

Probab=93.71  E-value=0.092  Score=44.38  Aligned_cols=57  Identities=18%  Similarity=0.295  Sum_probs=45.3

Q ss_pred             CCcccccccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCcccccccC
Q 022874          178 PPECHAELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAE  257 (291)
Q Consensus       178 ~~~C~~e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK~~~  257 (291)
                      .-.|--..|+.|.|-.|  +......|+.+||..|..+        .+|..|+|=..             .+.||||...
T Consensus         8 ~~~c~~~~n~~~~g~~i--~~~~~~~s~~~Cq~~C~~~--------p~C~~fTf~~~-------------~~~C~LK~s~   64 (161)
T 4a5v_A            8 DLSCVHSDNKGSRAPTI--GEPVPDVSLEQCAAQCKAV--------DGCTHFTYNDD-------------SKMCHVKEGK   64 (161)
T ss_dssp             CCSSCCCSSEEECSCBC--SCCBTTCCHHHHHHHHHHS--------TTCSEEEEETT-------------TCCEEEECSS
T ss_pred             ceeEEcCCCccccCCCe--eeeecCCCHHHHHHHCcCC--------CCCcEEEEECC-------------CCEEEEeCCC
Confidence            34677777888887776  3566889999999999995        58999999743             4789999765

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A

Probab=93.35  E-value=0.065  Score=53.25  Aligned_cols=65  Identities=22%  Similarity=0.376  Sum_probs=45.5

Q ss_pred             CCCcccc--cccccccccccccCCccccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCccccc
Q 022874          177 PPPECHA--ELHTDYDGVAIRWGLTHHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLK  254 (291)
Q Consensus       177 ~~~~C~~--e~htdy~G~aV~WG~~~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK  254 (291)
                      +...|..  ..++||.|..+.   .-...+|++||..|..+        .+|..|.|=....+=.+     .+..-||||
T Consensus        16 ~~~~c~~~~~~~~d~~G~d~~---~v~~~~~~~C~~~C~~~--------~~C~~ft~~~~~~~~~~-----~~~~~C~LK   79 (625)
T 2f83_A           16 VSGECVTQLLKDTCFEGGDIT---TVFTPSAKYCQVVCTYH--------PRCLLFTFTAESPSEDP-----TRWFTCVLK   79 (625)
T ss_dssp             ----CCCSCEEEEEECSCEEE---EEECSSHHHHHHHHHHS--------SSCCEEEEECCCTTSCS-----TTTTEEEEE
T ss_pred             hccchhhhhcccccccCCcee---EEecCCHHHHHHhccCC--------CCeeEEEEeCCCCCccc-----cccceEEec
Confidence            4556754  589999999876   33457899999999995        58999999987532111     134579999


Q ss_pred             ccC
Q 022874          255 YAE  257 (291)
Q Consensus       255 ~~~  257 (291)
                      ...
T Consensus        80 ~~~   82 (625)
T 2f83_A           80 DSV   82 (625)
T ss_dssp             CCG
T ss_pred             ccc
Confidence            754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00