Citrus Sinensis ID: 022920

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
ccccccccccccHHHHHHHccccccHHHHHHccccccccEEEEEEcccccHHHHcccccEEEEccccccEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEEccccccEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcc
ccccccccccccHHHHHHHccccccccccccccccccccEEEEEEEEccccHHHHccccEEEEEcccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccEEEEEEEEEccccccEcccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccEEEEEEEcccccccccHHcccHHHHHHHHHHHHHHHHHHc
mfmdnsffSGVTVLDALRENSIDIAEESLLQlkydpasvwGYIEVHIeqgpvlewvgFPLGVVQGIAGQTRLKVtvrgsqghagtvpmsmrqdpMTAAAELIVLLERLCkhpkdflsydgrsncstlesLSSSLVCTvgeisswpsasnvipgevtfTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCiverkhdanavmcdadlssQLKSASYAALKRMtgatqheipvimsgaghdAMAMSHLTKVGMLFVRcrggishspaehvldddVWAAGLAVLAFLETHV
MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVtvrgsqghagtvpmsmrqdPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISswpsasnvipgEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRsncstleslssslVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
******FFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG*****************TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLE***
MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
********SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
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MFMDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query290 2.2.26 [Sep-21-2011]
O49434525 Allantoate deiminase, chl yes no 0.972 0.537 0.769 1e-130
Q01264414 Hydantoin utilization pro N/A no 0.886 0.620 0.347 1e-41
Q53389409 N-carbamoyl-L-amino acid N/A no 0.841 0.596 0.350 8e-35
P37113409 N-carbamoyl-L-amino acid N/A no 0.841 0.596 0.346 5e-33
P77425411 Allantoate amidohydrolase N/A no 0.751 0.530 0.318 1e-26
Q57051411 Uncharacterized hydrolase yes no 0.779 0.549 0.312 4e-26
O32149412 Allantoate amidohydrolase yes no 0.796 0.560 0.326 7e-26
A0QZE3438 Putative hydrolase MSMEG_ no no 0.793 0.525 0.251 2e-11
>sp|O49434|AAH_ARATH Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=1 SV=2 Back     alignment and function desciption
 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/282 (76%), Positives = 256/282 (90%)

Query: 9   SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 68
           SG++V DAL+ENSIDI +E+L+QLKYDPASVWGY+EVHIEQGPVLEWVG+PLGVV+GIAG
Sbjct: 244 SGISVQDALKENSIDITDENLMQLKYDPASVWGYVEVHIEQGPVLEWVGYPLGVVKGIAG 303

Query: 69  QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLE 128
           QTRLKVTV+GSQGHAGTVPMSMRQDPMT AAELIVLLE +CK+PKD+LS + + N  T+E
Sbjct: 304 QTRLKVTVKGSQGHAGTVPMSMRQDPMTGAAELIVLLESVCKNPKDYLSCNVQCNEDTVE 363

Query: 129 SLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 188
           SL++SLVCTVGEIS+WPSASNVIPG+VTFTVDLR IDD GR+ +L++LS ++YQIC+KRS
Sbjct: 364 SLANSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDVGRKAILHDLSTRMYQICDKRS 423

Query: 189 VSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL 248
           + C +ERKHDA+AVM D  LS QLKSA+ +ALK+MTG  Q E+PV+MSGAGHDAMAM+HL
Sbjct: 424 LLCSIERKHDADAVMSDPQLSLQLKSAAQSALKKMTGEVQDEVPVLMSGAGHDAMAMAHL 483

Query: 249 TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290
           TKVGMLFVRCRGGISHSPAEHVLDDDV AAGLA+L FLE+ +
Sbjct: 484 TKVGMLFVRCRGGISHSPAEHVLDDDVGAAGLAILEFLESQM 525
Involved in the catabolism of purine nucleotides.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 3EC: .EC: 9
>sp|Q01264|HYUC_PSESN Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 Back     alignment and function description
>sp|Q53389|AMAB2_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 Back     alignment and function description
>sp|P37113|AMAB1_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=3 SV=2 Back     alignment and function description
>sp|P77425|ALLC_ECOLI Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1 Back     alignment and function description
>sp|Q57051|Y588_HAEIN Uncharacterized hydrolase HI_0588 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0588 PE=1 SV=1 Back     alignment and function description
>sp|O32149|ALLC_BACSU Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 Back     alignment and function description
>sp|A0QZE3|Y3995_MYCS2 Putative hydrolase MSMEG_3995/MSMEI_3903 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3995 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
359473090 492 PREDICTED: allantoate deiminase, chlorop 0.972 0.573 0.819 1e-136
297738015 478 unnamed protein product [Vitis vinifera] 0.972 0.589 0.819 1e-136
255582722 436 conserved hypothetical protein [Ricinus 0.972 0.646 0.826 1e-133
162944233 483 allantoate amidohydrolase [Glycine max] 0.958 0.575 0.794 1e-131
351724933 483 allantoate amidohydrolase precursor [Gly 0.958 0.575 0.794 1e-131
189502782 483 putative allantoate amidohydrolase [Phas 0.958 0.575 0.798 1e-131
218158555 479 allantoate amidohydrolase [Glycine max] 0.958 0.580 0.791 1e-131
356530191 483 PREDICTED: allantoate deiminase, chlorop 0.958 0.575 0.791 1e-130
297804132 529 hypothetical protein ARALYDRAFT_914645 [ 0.972 0.533 0.769 1e-130
449454780 504 PREDICTED: allantoate deiminase, chlorop 0.972 0.559 0.758 1e-129
>gi|359473090|ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/282 (81%), Positives = 256/282 (90%)

Query: 9   SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 68
           SGVTV +AL +NSI+  EE+L QLKYDP SVWGY+EVHIEQGPVLE +G PL VV+GIAG
Sbjct: 211 SGVTVQNALMDNSIEATEETLSQLKYDPKSVWGYVEVHIEQGPVLEGIGLPLAVVKGIAG 270

Query: 69  QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLE 128
           QTRLKVTVRGSQGHAGTVPMSMRQDPM AAAELIVLLE LCK PKDFLSYDG+ N   +E
Sbjct: 271 QTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYDGQCNGFAVE 330

Query: 129 SLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 188
           SLS SLVCTVGEISSWPSASNVIPG+VTFTVDLRAIDD GRE VLYELS+++YQICEKRS
Sbjct: 331 SLSGSLVCTVGEISSWPSASNVIPGQVTFTVDLRAIDDMGREAVLYELSDRMYQICEKRS 390

Query: 189 VSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL 248
           VSC +ERKHDANAV+CD +LS+QLKSA+Y+ LKRM G  Q ++PV+MSGAGHDAMAMSHL
Sbjct: 391 VSCTIERKHDANAVICDTELSTQLKSATYSTLKRMEGEIQGDVPVLMSGAGHDAMAMSHL 450

Query: 249 TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290
           TKVGMLFVRCRGGISHSPAEHVLD+DVWAAGLA+LAFLETH+
Sbjct: 451 TKVGMLFVRCRGGISHSPAEHVLDEDVWAAGLAILAFLETHL 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297738015|emb|CBI27216.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582722|ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis] gi|223528174|gb|EEF30237.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|162944233|emb|CAO78893.1| allantoate amidohydrolase [Glycine max] Back     alignment and taxonomy information
>gi|351724933|ref|NP_001236563.1| allantoate amidohydrolase precursor [Glycine max] gi|225348713|gb|ACN87318.1| allantoate amidohydrolase [Glycine max] Back     alignment and taxonomy information
>gi|189502782|gb|ABR57240.2| putative allantoate amidohydrolase [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|218158555|gb|ACK75561.1| allantoate amidohydrolase [Glycine max] Back     alignment and taxonomy information
>gi|356530191|ref|XP_003533667.1| PREDICTED: allantoate deiminase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297804132|ref|XP_002869950.1| hypothetical protein ARALYDRAFT_914645 [Arabidopsis lyrata subsp. lyrata] gi|297315786|gb|EFH46209.1| hypothetical protein ARALYDRAFT_914645 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449454780|ref|XP_004145132.1| PREDICTED: allantoate deiminase, chloroplastic-like [Cucumis sativus] gi|449473067|ref|XP_004153774.1| PREDICTED: allantoate deiminase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
TAIR|locus:2119732525 AAH "allantoate amidohydrolase 0.972 0.537 0.744 3.2e-113
TIGR_CMR|SPO_2556409 SPO_2556 "N-carbamyl-L-amino a 0.496 0.352 0.381 1.4e-38
UNIPROTKB|Q53389409 amaB "N-carbamoyl-L-amino acid 0.327 0.232 0.443 4.7e-38
UNIPROTKB|Q4KDM6425 PFL_2550 "N-carbamyl-L-amino a 0.475 0.324 0.346 1.2e-27
UNIPROTKB|Q4K949409 PFL_4137 "N-carbamyl-L-amino a 0.451 0.320 0.345 1.4e-25
UNIPROTKB|Q4KAF2426 PFL_3679 "N-carbamyl-L-amino a 0.472 0.321 0.337 5.1e-24
UNIPROTKB|P77425411 allC "allantoate amidohydrolas 0.493 0.347 0.302 4.2e-22
TAIR|locus:2158342476 UAH "ureidoglycolate amidohydr 0.334 0.203 0.387 4.4e-22
TIGR_CMR|CPS_4042411 CPS_4042 "amidase, hydantoinas 0.475 0.335 0.333 2.7e-21
TIGR_CMR|SPO_3304394 SPO_3304 "amidase, hydantoinas 0.227 0.167 0.5 1.2e-20
TAIR|locus:2119732 AAH "allantoate amidohydrolase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
 Identities = 210/282 (74%), Positives = 246/282 (87%)

Query:     9 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 68
             SG++V DAL+ENSIDI +E+L+QLKYDPASVWGY+EVHIEQGPVLEWVG+PLGVV+GIAG
Sbjct:   244 SGISVQDALKENSIDITDENLMQLKYDPASVWGYVEVHIEQGPVLEWVGYPLGVVKGIAG 303

Query:    69 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXX 128
             QTRLKVTV+GSQGHAGTVPMSMRQDPMT AAELIVLLE +CK+PKD+LS + +       
Sbjct:   304 QTRLKVTVKGSQGHAGTVPMSMRQDPMTGAAELIVLLESVCKNPKDYLSCNVQCNEDTVE 363

Query:   129 XXXXXXVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 188
                   VCTVGEIS+WPSASNVIPG+VTFTVDLR IDD GR+ +L++LS ++YQIC+KRS
Sbjct:   364 SLANSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDVGRKAILHDLSTRMYQICDKRS 423

Query:   189 VSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL 248
             + C +ERKHDA+AVM D  LS QLKSA+ +ALK+MTG  Q E+PV+MSGAGHDAMAM+HL
Sbjct:   424 LLCSIERKHDADAVMSDPQLSLQLKSAAQSALKKMTGEVQDEVPVLMSGAGHDAMAMAHL 483

Query:   249 TKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETHV 290
             TKVGMLFVRCRGGISHSPAEHVLDDDV AAGLA+L FLE+ +
Sbjct:   484 TKVGMLFVRCRGGISHSPAEHVLDDDVGAAGLAILEFLESQM 525
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0016813 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" evidence=IEA
GO:0010136 "ureide catabolic process" evidence=IMP
GO:0047652 "allantoate deiminase activity" evidence=IGI;IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0015996 "chlorophyll catabolic process" evidence=RCA
TIGR_CMR|SPO_2556 SPO_2556 "N-carbamyl-L-amino acid amidohydrolase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q53389 amaB "N-carbamoyl-L-amino acid hydrolase" [Geobacillus stearothermophilus (taxid:1422)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KDM6 PFL_2550 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4K949 PFL_4137 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KAF2 PFL_3679 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|P77425 allC "allantoate amidohydrolase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2158342 UAH "ureidoglycolate amidohydrolase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4042 CPS_4042 "amidase, hydantoinase/carbamoylase family" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3304 SPO_3304 "amidase, hydantoinase/carbamoylase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O49434AAH_ARATH3, ., 5, ., 3, ., 90.76950.97240.5371yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 5e-98
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 7e-87
PRK12890414 PRK12890, PRK12890, allantoate amidohydrolase; Rev 6e-78
PRK12893412 PRK12893, PRK12893, allantoate amidohydrolase; Rev 4e-73
TIGR01879400 TIGR01879, hydantase, amidase, hydantoinase/carbam 2e-64
PRK12892412 PRK12892, PRK12892, allantoate amidohydrolase; Rev 6e-62
PRK13590591 PRK13590, PRK13590, putative bifunctional OHCU dec 4e-54
PRK13799591 PRK13799, PRK13799, unknown domain/N-carbamoyl-L-a 8e-52
PRK12891414 PRK12891, PRK12891, allantoate amidohydrolase; Rev 5e-43
TIGR03176406 TIGR03176, AllC, allantoate amidohydrolase 6e-38
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 1e-30
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 1e-19
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 3e-11
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 1e-08
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 3e-08
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 6e-07
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 8e-07
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 7e-06
cd05664398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 2e-05
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 2e-05
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 3e-05
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 2e-04
cd02697395 cd02697, M20_like, M20 Zn-peptidases include exope 2e-04
cd03896359 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar 5e-04
cd08011390 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with 0.001
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 0.004
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information 
 Score =  293 bits (752), Expect = 5e-98
 Identities = 113/275 (41%), Positives = 155/275 (56%), Gaps = 29/275 (10%)

Query: 10  GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 69
           GVT+ +AL    I    E L +   DP  +  Y+E+HIEQGPVLE  G P+GVV GIAG 
Sbjct: 150 GVTLAEALAA--IGYDPERLAEAARDPGDIAAYLELHIEQGPVLEAEGLPIGVVTGIAGI 207

Query: 70  TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLES 129
            RL+VTV G  GHAGT PM++R+D + AAAELI+ +ER+ +                   
Sbjct: 208 RRLRVTVTGEAGHAGTTPMALRRDALLAAAELILAVERIAR------------------E 249

Query: 130 LSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 189
           L   LV TVG +   P+A NVIPGEV FT+D+R+ DDA  + ++  +     +I  +R V
Sbjct: 250 LGDDLVATVGRLEVEPNAVNVIPGEVEFTLDIRSPDDAVLDALVAAIRAAAEEIAARRGV 309

Query: 190 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLT 249
              +ER  D+  V  D +L + L++A          A       + SGAGHDAM M+ + 
Sbjct: 310 EVEIERLSDSPPVPFDPELVAALEAA--------AEALGLSYRRLPSGAGHDAMIMARIC 361

Query: 250 KVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLA 284
              M+FV  +GGISH+PAE+   +D+ AAG  VL 
Sbjct: 362 PTAMIFVPSKGGISHNPAEYTSPEDL-AAGAEVLL 395

Peptidase M20 family, beta-alanine synthase (bAS; N-carbamoyl-beta-alanine amidohydrolase and beta-ureidopropionase; EC 3.5.1.6) subfamily. bAS is an amidohydrolase and is the final enzyme in the pyrimidine catabolic pathway, which is involved in the regulation of the cellular pyrimidine pool. The bAS catalyzes the irreversible hydrolysis of the N-carbamylated beta-amino acids to beta-alanine or aminoisobutyrate under the release of carbon dioxide and ammonia. Also included in this subfamily is allantoate amidohydrolase (allantoate deiminase), which catalyzes the conversion of allantoate to (S)-ureidoglycolate, one of the crucial alternate steps in purine metabolism. It is possible that these two enzymes arose from the same ancestral peptidase that evolved into two structurally related enzymes with distinct catalytic properties and biochemical roles within the cell. Yeast requires beta-alanine as a precursor of pantothenate and coenzyme A biosynthesis, but generates it mostly via degradation of spermine. Disorders in pyrimidine degradation and beta-alanine metabolism caused by beta-ureidopropionase deficiency (UPB1 gene) in humans are normally associated with neurological disorders. Length = 399
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|237248 PRK12890, PRK12890, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|200138 TIGR01879, hydantase, amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>gnl|CDD|183817 PRK12892, PRK12892, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|184168 PRK13590, PRK13590, putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|106740 PRK13799, PRK13799, unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|237249 PRK12891, PRK12891, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|234137 TIGR03176, AllC, allantoate amidohydrolase Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193494 cd02697, M20_like, M20 Zn-peptidases include exopeptidases Back     alignment and domain information
>gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins Back     alignment and domain information
>gnl|CDD|193559 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 290
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
PLN02280478 IAA-amino acid hydrolase 99.97
PLN02693437 IAA-amino acid hydrolase 99.97
PRK07338402 hypothetical protein; Provisional 99.95
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 99.95
TIGR01891363 amidohydrolases amidohydrolase. This model represe 99.95
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 99.94
PRK06915422 acetylornithine deacetylase; Validated 99.94
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 99.94
PRK06133410 glutamate carboxypeptidase; Reviewed 99.93
TIGR01883361 PepT-like peptidase T-like protein. This model rep 99.93
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 99.93
PRK00466346 acetyl-lysine deacetylase; Validated 99.93
PRK08652347 acetylornithine deacetylase; Provisional 99.93
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 99.93
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 99.92
PRK07473376 carboxypeptidase; Provisional 99.92
PRK13983400 diaminopimelate aminotransferase; Provisional 99.92
PRK13381404 peptidase T; Provisional 99.91
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 99.91
PRK07522385 acetylornithine deacetylase; Provisional 99.91
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 99.9
PRK05469408 peptidase T; Provisional 99.9
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 99.9
PRK08262486 hypothetical protein; Provisional 99.9
PRK05111383 acetylornithine deacetylase; Provisional 99.9
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 99.9
PRK06837427 acetylornithine deacetylase; Provisional 99.9
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 99.89
PRK09133472 hypothetical protein; Provisional 99.89
PRK13004399 peptidase; Reviewed 99.89
PRK08737364 acetylornithine deacetylase; Provisional 99.89
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 99.88
PRK07906426 hypothetical protein; Provisional 99.87
PRK06446436 hypothetical protein; Provisional 99.87
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 99.87
TIGR01882410 peptidase-T peptidase T. This model represents a t 99.86
PRK04443348 acetyl-lysine deacetylase; Provisional 99.86
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.85
PRK08201456 hypothetical protein; Provisional 99.85
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 99.85
PRK08596421 acetylornithine deacetylase; Validated 99.84
PRK07318466 dipeptidase PepV; Reviewed 99.84
PRK06156520 hypothetical protein; Provisional 99.83
PRK09104464 hypothetical protein; Validated 99.83
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 99.83
PRK07907449 hypothetical protein; Provisional 99.82
PRK07205444 hypothetical protein; Provisional 99.8
PRK07079469 hypothetical protein; Provisional 99.8
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 99.75
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.75
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 99.69
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 99.66
PRK08554438 peptidase; Reviewed 99.59
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.52
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 99.03
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 97.81
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 97.09
PRK09961344 exoaminopeptidase; Provisional 96.96
PRK09864356 putative peptidase; Provisional 96.68
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 96.4
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 95.15
COG4187 553 RocB Arginine degradation protein (predicted deacy 93.96
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 93.65
PRK02256462 putative aminopeptidase 1; Provisional 91.43
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 87.04
PRK02813428 putative aminopeptidase 2; Provisional 84.03
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information 
Probab=100.00  E-value=9.2e-43  Score=323.01  Aligned_cols=256  Identities=30%  Similarity=0.449  Sum_probs=221.9

Q ss_pred             CcccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCC
Q 022920            3 MDNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGH   82 (290)
Q Consensus         3 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~H   82 (290)
                      +..+|.+|+|+.|||+++||++.  .+....   +.+.+|+|+|++||+.|+..+.+.|++++++|..+++|+|+|+++|
T Consensus       147 ~~~~d~~g~~~~~~~~~~g~~~~--~~~~~~---~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaH  221 (406)
T TIGR03176       147 RTIEDAKGIKFVDAMHACGFDLR--KAPTVR---DDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANH  221 (406)
T ss_pred             HhCcCCCCCCHHHHHHHcCCCcc--cccccc---cccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCC
Confidence            45689999999999999999874  334332   4789999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEec
Q 022920           83 AGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLR  162 (290)
Q Consensus        83 a~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR  162 (290)
                      +|..||..++||+.++++++.+++++..+                  .....++|||.|+++|++.|+||++|++.+|+|
T Consensus       222 ag~~p~~~r~dAi~aaa~~i~~l~~~~~~------------------~~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR  283 (406)
T TIGR03176       222 AGTTPMSYRRDTVYAFSRICTQSIERAKE------------------IGDPLVLTFGKVEPVPNTVNVVPGETTFTIDCR  283 (406)
T ss_pred             CCCCCcccccCHHHHHHHHHHHHHHHHHh------------------cCCCcEEEEEEEEEcCCceEEECCeEEEEEEee
Confidence            99867434699999999999999887543                  122568999999965899999999999999999


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHH
Q 022920          163 AIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDA  242 (290)
Q Consensus       163 ~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~  242 (290)
                      +.+.+..+.+.++|++.+++++..+++++++......+|...|+++++.+++++++..+.        ...++++|++|+
T Consensus       284 ~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~~~~p~~~d~~lv~~l~~a~~~~~~~--------~~~~~sggg~Da  355 (406)
T TIGR03176       284 HTDAAVLRNFTKELENDMKAIADEMDITIDIDLWMDEAPVPMNKEIVAIIEQLAKAEKLN--------YRLMHSGAGHDA  355 (406)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCCCCCCHHHHHHHHHHHHHcCCC--------ceecCcccHHHH
Confidence            999999999999999999999999999988875444556677889999999999886321        223357789999


Q ss_pred             HHHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920          243 MAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH  289 (290)
Q Consensus       243 ~~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l  289 (290)
                      ++|++.+|++|+|+|+.++.+|+++||+..+++..++.+|..++.+|
T Consensus       356 ~~~~~~vP~~~ifgp~~~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l  402 (406)
T TIGR03176       356 QIFAPRVPTAMIFVPSIGGISHNPAERTNIEDLVEGVKTLADMLYEL  402 (406)
T ss_pred             HHHHHHCCEEEEEEeCCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987777999999999999999999999999876

This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
3n5f_A408 Crystal Structure Of L-N-Carbamoylase From Geobacil 3e-35
1z2l_A423 Crystal Structure Of Allantoate-Amidohydrolase From 4e-26
2imo_A423 Crystal Structure Of Allantoate Amidohydrolase From 1e-22
2v8g_A474 Crystal Structure Of Beta-Alanine Synthase From Sac 1e-19
1r3n_A462 Crystal Structure Of Beta-Alanine Synthase From Sac 2e-19
2v8d_A474 Crystal Structure Of Mutant E159a Of Beta-Alanine S 2e-19
2v8v_A474 Crystal Structure Of Mutant R322a Of Beta-Alanine S 1e-18
1r43_A463 Crystal Structure Of Beta-Alanine Synthase From Sac 3e-18
>pdb|3N5F|A Chain A, Crystal Structure Of L-N-Carbamoylase From Geobacillus Stearothermophilus Cect43 Length = 408 Back     alignment and structure 
Iteration: 1

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 30/274 (10%)
Query: 10  GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 69
           G+++ +A+++  +D   + L Q    P +V  Y+E+HIEQG VLE  G P+G+V GIAG 
Sbjct: 155 GISLAEAMKQAGLD--PDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGL 212
Query: 70  TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRXXXXXXXX 129
             +K T+ G   HAG  PMS+R+DPM AAA++I+++E   +                   
Sbjct: 213 IWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR------------------ 254
Query: 130 XXXXXVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 189
                V TVG++  +P   NVIP  V F +DLR +    R+ V   ++ +   I ++R+V
Sbjct: 255 -TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNV 313
Query: 190 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLT 249
               ER  +   V+C    S ++K A+ AA +++ G     +P   SGA HD++ ++ + 
Sbjct: 314 RVTTERLQEMPPVLC----SDEVKRAAEAACQKL-GYPSFWLP---SGAAHDSVQLAPIC 365
Query: 250 KVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVL 283
            +GM+FVR + G+SHSPAE    +D  AAG  VL
Sbjct: 366 PIGMIFVRSQDGVSHSPAEWSTKEDC-AAGAEVL 398
>pdb|1Z2L|A Chain A, Crystal Structure Of Allantoate-Amidohydrolase From E.Coli K12 In Complex With Substrate Allantoate Length = 423 Back     alignment and structure
>pdb|2IMO|A Chain A, Crystal Structure Of Allantoate Amidohydrolase From Escherichia Coli At Ph 4.6 Length = 423 Back     alignment and structure
>pdb|2V8G|A Chain A, Crystal Structure Of Beta-Alanine Synthase From Saccharomyces Kluyveri In Complex With The Product Beta- Alanine Length = 474 Back     alignment and structure
>pdb|1R3N|A Chain A, Crystal Structure Of Beta-Alanine Synthase From Saccharomyces Kluyveri Length = 462 Back     alignment and structure
>pdb|2V8D|A Chain A, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase From Saccharomyces Kluyveri Length = 474 Back     alignment and structure
>pdb|2V8V|A Chain A, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase From Saccharomyces Kluyveri Length = 474 Back     alignment and structure
>pdb|1R43|A Chain A, Crystal Structure Of Beta-Alanine Synthase From Saccharomyces Kluyveri (Selenomethionine Substituted Protein) Length = 463 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 1e-98
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 2e-96
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 1e-86
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 2e-11
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 1e-08
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 2e-07
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 2e-07
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 3e-07
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 6e-07
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 8e-06
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 5e-05
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 1e-04
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Length = 408 Back     alignment and structure
 Score =  294 bits (756), Expect = 1e-98
 Identities = 89/275 (32%), Positives = 143/275 (52%), Gaps = 30/275 (10%)

Query: 10  GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 69
           G+++ +A+++    +  + L Q    P +V  Y+E+HIEQG VLE  G P+G+V GIAG 
Sbjct: 155 GISLAEAMKQ--AGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGL 212

Query: 70  TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLES 129
             +K T+ G   HAG  PMS+R+DPM AAA++I+++E   +                   
Sbjct: 213 IWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTGT--------------- 257

Query: 130 LSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 189
                V TVG++  +P   NVIP  V F +DLR +    R+ V   ++ +   I ++R+V
Sbjct: 258 ----TVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNV 313

Query: 190 SCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLT 249
               ER  +   V+C  ++    ++A             +    + SGA HD++ ++ + 
Sbjct: 314 RVTTERLQEMPPVLCSDEVKRAAEAA--------CQKLGYPSFWLPSGAAHDSVQLAPIC 365

Query: 250 KVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLA 284
            +GM+FVR + G+SHSPAE    +D  AAG  VL 
Sbjct: 366 PIGMIFVRSQDGVSHSPAEWSTKEDC-AAGAEVLY 399
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Length = 423 Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Length = 474 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 99.98
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 99.98
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 99.97
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 99.97
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 99.96
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 99.96
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 99.94
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 99.94
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 99.94
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 99.94
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 99.94
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 99.93
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 99.93
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 99.93
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 99.93
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 99.91
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 99.9
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 99.9
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 99.9
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 99.89
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 99.89
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 99.88
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 99.88
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 99.78
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 98.53
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 98.22
1vho_A346 Endoglucanase; structural genomics, unknown functi 98.02
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 97.89
1ylo_A348 Hypothetical protein SF2450; structural genomics, 97.87
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 97.54
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 97.53
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 97.53
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 97.51
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 97.5
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 97.47
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 97.18
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 97.04
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 96.98
2gre_A349 Deblocking aminopeptidase; structural genomi prote 96.43
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 92.32
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 91.41
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 90.57
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 87.7
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 86.48
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
Probab=100.00  E-value=9.6e-39  Score=295.58  Aligned_cols=257  Identities=33%  Similarity=0.568  Sum_probs=224.6

Q ss_pred             cccCCCCCCHHHHHHHCCCCcchhhhhhccCCCCCceeEEEeeccCCcccccCCCceEEEEeeecceEEEEEEEecCCCC
Q 022920            4 DNSFFSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHA   83 (290)
Q Consensus         4 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hi~~g~~l~~~~~~~g~v~~~~g~~~~~i~v~G~~~Ha   83 (290)
                      .++|.+|+++.++|.+.|+++  +.+.....++..+.+++++|++||+.++..+.+.|++.+++|..+++|+++|+++|+
T Consensus       149 ~~~~~~G~~~~~~l~~~G~~~--~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Ha  226 (408)
T 3n5f_A          149 ECRDAEGISLAEAMKQAGLDP--DRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHA  226 (408)
T ss_dssp             SCBCTTCCBHHHHHHHTTCCG--GGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEET
T ss_pred             hccCCCCCCHHHHHHHhCCCh--hhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcC
Confidence            457899999999999999986  445555555567899999999999888767778899999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCcceeCCeEEEEEEecC
Q 022920           84 GTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRA  163 (290)
Q Consensus        84 ~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~NvIP~~a~~~~diR~  163 (290)
                      +..||+.|+||+.++++++.+|+++..+                  .+ .+++++|.|++++++.|+||++|++.+|+|+
T Consensus       227 gs~P~~~g~nAi~~aa~~i~~l~~~~~~------------------~~-~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~  287 (408)
T 3n5f_A          227 GATPMSLRRDPMAAAAQIIIVIEEEARR------------------TG-TTVGTVGQLHVYPGGINVIPERVEFVLDLRD  287 (408)
T ss_dssp             TTSCTTTCCCHHHHHHHHHHHHHHHHHH------------------HS-SCEEEEEEEEEESCCTTEECSEEEEEEEEEE
T ss_pred             CCCccccccCHHHHHHHHHHHHHHHHHh------------------cC-CcEEEEEEEEecCCCCcCcCCeEEEEEEEeC
Confidence            5449558999999999999999998632                  23 6799999999945999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCCcCCCCHHHHHHHHHHHHHHHhhccCCCCCccccccCccchHHH
Q 022920          164 IDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDANAVMCDADLSSQLKSASYAALKRMTGATQHEIPVIMSGAGHDAM  243 (290)
Q Consensus       164 ~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~s~g~~D~~  243 (290)
                      .+.+..+.+.++|++++++++..+|++++++....+|++.+|+++++.++++++++ |.+   .    ...+++|++||+
T Consensus       288 ~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~~~d~~l~~~~~~a~~~~-g~~---~----~~~~~~ggtD~~  359 (408)
T 3n5f_A          288 LKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVLCSDEVKRAAEAACQKL-GYP---S----FWLPSGAAHDSV  359 (408)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECCEECCHHHHHHHHHHHHHH-TCC---C----CEEEESSCCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCcCCCHHHHHHHHHHHHHc-CCC---c----ccCCCcCchHHH
Confidence            99999999999999999999988999999998888999999999999999999987 542   1    222456899999


Q ss_pred             HHhhhCCeEEEEEecCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhc
Q 022920          244 AMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLAFLETH  289 (290)
Q Consensus       244 ~~~~~~P~~~~f~g~~~~~~H~~~E~~~~e~~~~~~~~~~~~l~~l  289 (290)
                      +|.+.+|++++|+|+..+.+|+++|++.++++..++++|..++.+|
T Consensus       360 ~~~~~iP~~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l  405 (408)
T 3n5f_A          360 QLAPICPIGMIFVRSQDGVSHSPAEWSTKEDCAAGAEVLYHTVWQL  405 (408)
T ss_dssp             TTTTTSCEEEEEECCGGGCCSSTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCEEEEEeCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHH
Confidence            9998899999999887667999999999999999999999998875
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 290
d1r3na1322 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta- 2e-17
d1r3na1322 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta- 1e-11
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 7e-17
d1z2la1293 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydro 3e-16
d1z2la1293 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydro 8e-07
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 1e-12
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 8e-11
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 5e-06
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 4e-05
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 8e-04
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 0.003
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Peptidase-like beta-alanine synthase, catalytic domain
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 228 QHEIPVIMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGLAVLA 284
           + ++  I SGAGHD+   +      M+F+  + G+SH+  E+   ++    G  VL 
Sbjct: 252 KDQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYSSPEE-IENGFKVLL 307
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 322 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Length = 293 Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Length = 293 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.92
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.89
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.87
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.86
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.85
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.84
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.84
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.8
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.31
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 98.13
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 97.82
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 97.68
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 97.38
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 96.12
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 94.92
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 94.91
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 93.65
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 93.4
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 93.17
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 91.39
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Bacterial exopeptidase dimerisation domain
family: Bacterial exopeptidase dimerisation domain
domain: Protein YxeP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=1.4e-24  Score=163.77  Aligned_cols=114  Identities=20%  Similarity=0.313  Sum_probs=90.6

Q ss_pred             ceEEEEEEEecCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccCCCCeEEEEEEEEecCCCc
Q 022920           69 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSAS  148 (290)
Q Consensus        69 ~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~~g~~~  148 (290)
                      .++|+|+|+|+++|+++ | +.|+||+.++++++.+|+++..+.         .     ++. ...++++|.+++ |++.
T Consensus         2 ~d~f~v~v~Gk~aHaa~-P-~~g~nai~~a~~~i~~l~~~~~~~---------~-----~~~-~~~~~~~~~i~~-G~~~   63 (115)
T d1ysja2           2 VDRFEIVIKGKGGHASI-P-NNSIDPIAAAGQIISGLQSVVSRN---------I-----SSL-QNAVVSITRVQA-GTSW   63 (115)
T ss_dssp             EEEEEEEEECC----------CCCCHHHHHHHHHHHHC--------------------------CCEEEEEEEEE-CSCS
T ss_pred             ceEEEEEEEEecccccC-c-ccCcCHHHHHHHHHHHhcccchhc---------c-----ccc-ccccceeeEEec-Cccc
Confidence            57899999999999997 9 899999999999999998876542         1     233 367999999998 8899


Q ss_pred             ceeCCeEEEEEEecCCChHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeecCC
Q 022920          149 NVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERKHDAN  200 (290)
Q Consensus       149 NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~e~~~~~~~~  200 (290)
                      |+||++|++.+|+|+.+.+..+.+.++|+++++++++.+|+++++++...||
T Consensus        64 NvIP~~~~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~~~~P  115 (115)
T d1ysja2          64 NVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWFPYLP  115 (115)
T ss_dssp             SSCCSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred             cccCcceEEEEEeccCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEEcCCC
Confidence            9999999999999999999999999999999999999999999999877765
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure