Citrus Sinensis ID: 022936

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQSG
Secondary Structure (PSIPRED)
cEEEEHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHHEEcccccccHHHHHHHHHHHHHHHHHEEcccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
milvnkfvlsgynfdaGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEvdylsrtpllrlpsfWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVgslnkiplsVAGILLfkvptslensASIFFGLLAGVFFARAKMWERSQSG
Flexible Loop (DISEMBL)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQSG
Low Complexity Region (SEG)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQSG
Disordered region (IsUnstruct)
*ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMW******
Disordered Region (DISOPRED)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK**T*SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR***W******
Disordered Region (DISEMBL)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQSG
Disordered Region (DISPRO)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQSG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q941R4	333	GDP-mannose transporter G	yes	no	0.989	0.861	0.853	1e-134
Q84L09	375	GDP-mannose transporter G	no	no	0.975	0.754	0.685	1e-111
Q2UTL1	381	GDP-mannose transporter O	yes	no	0.965	0.734	0.287	1e-34
Q4WTQ6	382	GDP-mannose transporter O	yes	no	0.958	0.727	0.301	3e-34
B0Y384	382	GDP-mannose transporter O	N/A	no	0.958	0.727	0.301	3e-34
Q2AAF6	329	GDP-mannose transporter O	yes	no	0.962	0.848	0.305	4e-34
Q9UTK8	345	GDP-mannose transporter O	yes	no	0.962	0.808	0.31	9e-34
A1CZJ3	382	GDP-mannose transporter 1	N/A	no	0.958	0.727	0.298	1e-33
Q0UG89	381	GDP-mannose transporter O	N/A	no	0.965	0.734	0.280	2e-33
A1C9R4	381	GDP-mannose transporter O	N/A	no	0.958	0.729	0.298	2e-33

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score =  476 bits (1226), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/287 (85%), Positives = 268/287 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLS+AGI+LF VPTSL+NSASI FGL+AGV FARAKM E+S
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKMREKS 333

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1

 Score =  402 bits (1032), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/283 (68%), Positives = 235/283 (83%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MI++NK VLS YNF+AG+SLM+YQN IS + V +L   GV+S E   W+LI+VW+PVNVI
Sbjct: 92  MIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVI 151

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML++ M+SLKYINVAMVT+LKN TN++T +GE+Y+F KR +N+VWAA+F+MIISAIS
Sbjct: 152 FVGMLVSGMYSLKYINVAMVTILKNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAIS 211

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDL+F AVGY WQ+ NCFLTASYSLTLRRVMD AKQ TKSG+LNE SMVLLNN LS+
Sbjct: 212 GGITDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSI 271

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           P G++L+I+  E  Y+  T + +   FW+V T SGFLGLAISFTSMWFLHQTG TTYSLV
Sbjct: 272 PFGIILIILLGEWRYVISTDVTKDSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLV 331

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM 283
           GSLNK+P+S+AG++LF VP SL N  SI FGL AGV FARAKM
Sbjct: 332 GSLNKVPISLAGLVLFNVPLSLPNLFSILFGLFAGVVFARAKM 374

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2UTL1|GMT_ASPOR GDP-mannose transporter OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gmt1 PE=3 SV=2

 Score =  147 bits (370), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 163/306 (53%), Gaps = 26/306 (8%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + ++ +    F G+I+    +    K W P++++
Sbjct: 58  MTVMNKYVLSGLDFNLNFFLLCVQSIVCIIAIQTCKFCGLITYRDFSADEAKKWFPISLL 117

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 118 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 177

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 178 AAWADIK-HAVESSGDTSAQVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 229

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNE---VDYLSRTPLLRLPSFWLVMTLSGFLGLAIS 222
             +F  +  NN LS+P+ V+L  +  +    +     P     S    M LSG   + IS
Sbjct: 230 FKDFDTMFYNNLLSIPVLVVLTGLMEDWSSANIDRNFPQADRSSIMFAMILSGLSSVFIS 289

Query: 223 FTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK 282
           +TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G ++G+ +A AK
Sbjct: 290 YTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIAVGFVSGIVYAIAK 349

Query: 283 MWERSQ 288
           + + ++
Sbjct: 350 IKQNAK 355

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|Q4WTQ6|GMT_ASPFU GDP-mannose transporter OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gmt1 PE=3 SV=1

 Score =  145 bits (366), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 30/308 (9%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       PS         M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G ++G+ +A 
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAV 348

Query: 281 AKMWERSQ 288
           AK+ + ++
Sbjct: 349 AKIKQSAK 356

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|B0Y384|GMT_ASPFC GDP-mannose transporter OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=gmt1 PE=3 SV=1

 Score =  145 bits (366), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 30/308 (9%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       PS         M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G ++G+ +A 
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAV 348

Query: 281 AKMWERSQ 288
           AK+ + ++
Sbjct: 349 AKIKQSAK 356

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804)

>sp|Q2AAF6|GMT_PICPA GDP-mannose transporter OS=Komagataella pastoris GN=VIG4 PE=3 SV=1

 Score =  145 bits (365), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 159/301 (52%), Gaps = 22/301 (7%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M + NK+ +SG +F+    L+  Q  + +  ++ L  L VI+         K W P+ V+
Sbjct: 30  MTVTNKYAVSGVDFNFNFFLLAVQGIVCITLISSLKQLNVITFREFNKVEAKKWFPIAVL 89

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  R  N    +  LM++S+  
Sbjct: 90  LVVMIYTSSKALQYLSIPIYTIFKNLTIILIAYGEVIWFGGRVTNLALGSFVLMVLSSAV 149

Query: 121 GGITD-------LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
               D       L+F+ +GY W   NCF +A++ L +R+ +       K  N  +F  + 
Sbjct: 150 ASYGDSNVDTGKLNFN-IGYFWMFTNCFSSAAFVLFMRKRI-------KLTNFKDFDTMY 201

Query: 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLP-----SFWLVMTLSGFLGLAISFTSMWF 228
            NN LS+P  +LL       D+ ++      P     +    M +SG   + IS+TS W 
Sbjct: 202 YNNLLSIP--ILLFASLTTEDWSAKNIAQNFPEDTKYAVIASMIISGMSAVGISYTSAWC 259

Query: 229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ 288
           +  T +TTYS+VG+LNK+P++++G+L FK P +  + +SIF G  AG+ +A AK  ++ +
Sbjct: 260 VRVTSSTTYSMVGALNKLPIALSGLLFFKAPINFYSISSIFIGFAAGLVYAIAKQKQKKE 319

Query: 289 S 289
            
Sbjct: 320 D 320

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Pichia pastoris (taxid: 4922)

>sp|Q9UTK8|GMT_SCHPO GDP-mannose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vrg4 PE=3 SV=1

 Score =  144 bits (362), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 159/300 (53%), Gaps = 21/300 (7%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M L NK+VLS   ++    L+  Q+ + V  + IL  L VI+     +R  K W P++ +
Sbjct: 27  MTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGILKRLKVINYRDFDFREAKFWFPISFL 86

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ T+  +L++++V + T+ KN+T +I A GE+  F          +  LM++S+I 
Sbjct: 87  LVAMIYTASKALQFLSVPVYTIFKNLTIIIIAYGEVLWFGGHVTALTLFSFGLMVLSSIV 146

Query: 121 GGITDL---SFHAV----GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
               D+   SF +     GY W ++NC   A++ L +R+ +       K  N  +F  + 
Sbjct: 147 AAWADIQSSSFASQTLNSGYLWMVLNCLTNAAFVLAMRKRI-------KLTNFRDFDTMF 199

Query: 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLAISFTSMWF 228
            NN LS+P+ V+  + F E D+ +       P        + M +SG   + IS+TS W 
Sbjct: 200 YNNLLSIPVLVICTL-FTE-DWSAENIAQNFPPDAKFGVLMAMAISGVSSVGISYTSAWC 257

Query: 229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ 288
           +  T +TTYS+VG+LNK+PL++AG++ F  P +  +  +I  G ++GV +A AK  ++ Q
Sbjct: 258 VRVTSSTTYSMVGALNKLPLAIAGLVFFDAPITFGSVTAILLGFISGVVYAVAKSQQQRQ 317

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|A1CZJ3|GMT1_NEOFI GDP-mannose transporter 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gmt1 PE=3 SV=1

 Score =  143 bits (361), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 30/308 (9%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGTDFNLNFFLLCVQSIVCIVAIQTCKSSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGMTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       P          M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPPADRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G ++G+ +A 
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAV 348

Query: 281 AKMWERSQ 288
           AK+ + ++
Sbjct: 349 AKIKQSAK 356

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|Q0UG89|GMT_PHANO GDP-mannose transporter OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=VRG4 PE=3 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 165/310 (53%), Gaps = 30/310 (9%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M + NK+VLSG +F+    L+  Q+ + V  ++I    G+I+         K W P++++
Sbjct: 55  MTVTNKYVLSGVDFNLNFFLLCVQSVVCVTAISICKAAGLITYRDFNTDEAKKWFPISLL 114

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T  ++LKY+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 115 LIGMIYTGTWALKYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTPMTLFSFGLMVLSSII 174

Query: 121 GGITDL-------------------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT 161
               D+                   + HA GY W   NC  +A+Y L++R+ +       
Sbjct: 175 AAWADIQHALNSFGQQSEAANEALSTMHA-GYLWMAFNCVCSATYLLSMRKRI------- 226

Query: 162 KSGNLNEFSMVLLNNSLSLPL---GVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLG 218
           K  N  ++  +  NN L++P+     +LV  ++  +     P  +  +  +VM +SG   
Sbjct: 227 KLTNFKDYDTMYYNNLLTIPILLVASILVEDWSSANIQKNFPPEQRNTVIMVMVISGMST 286

Query: 219 LAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFF 278
           + IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++IF G ++G+ +
Sbjct: 287 VFISYTSAWAVRVTSSTTYSMVGALNKLPIAISGLVFFDAPVTFGSVSAIFVGFVSGIVY 346

Query: 279 ARAKMWERSQ 288
           A AK+ + S+
Sbjct: 347 AVAKVRQNSK 356

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (taxid: 321614)

>sp|A1C9R4|GMT_ASPCL GDP-mannose transporter OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=gmt1 PE=3 SV=1

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 30/308 (9%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGTDFNLNFLLLCVQSIVCIVAIQTCKASKLITYRDFNADEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       P          M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANITRNFPPADRNGIMFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
           IS+TS W +  T +TTYS+VG+LNK+P++V+G++ F  P +  + ++I  G ++G+ +A 
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIAVSGLIFFDAPVTFPSVSAIVVGFVSGIVYAV 348

Query: 281 AKMWERSQ 288
           AK+ + ++
Sbjct: 349 AKIKQNAK 356

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
296088545	648	unnamed protein product [Vitis vinifera]	0.996	0.445	0.892	1e-148
224080961	336	predicted protein [Populus trichocarpa]	0.989	0.854	0.898	1e-145
449513327	336	PREDICTED: GDP-mannose transporter GONST	0.989	0.854	0.888	1e-144
224093398	300	predicted protein [Populus trichocarpa]	0.975	0.943	0.897	1e-143
449459266	543	PREDICTED: GDP-mannose transporter GONST	0.993	0.530	0.881	1e-142
356507466	340	PREDICTED: GDP-mannose transporter GONST	0.996	0.85	0.861	1e-140
357464677	342	GDP-mannose transporter [Medicago trunca	0.996	0.845	0.878	1e-136
297836010	332	GONST1 [Arabidopsis lyrata subsp. lyrata	0.989	0.864	0.853	1e-132
18397301	333	GDP-mannose transporter [Arabidopsis tha	0.989	0.861	0.853	1e-132
15487237	333	GDP-Mannose transporter [Arabidopsis tha	0.989	0.861	0.853	1e-132

>gi|296088545|emb|CBI37536.3| unnamed protein product [Vitis vinifera]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/289 (89%), Positives = 278/289 (96%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS Y+F+AGISLM+YQN +SV+ VT+LSF G+I+TEPLTW+LIKVWLPVNVI
Sbjct: 360 MILVNKFVLSSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWLPVNVI 419

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK HDNRVWAALFLMIISAIS
Sbjct: 420 FVGMLVTSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKHHDNRVWAALFLMIISAIS 479

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+ +GY WQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNN+LSL
Sbjct: 480 GGITDLSFNGIGYTWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNTLSL 539

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLGV+L+ VFNEVDYLS TPLLRLP+FWLVMTLSGFLGLAISF+SMWFLHQTGATTYSLV
Sbjct: 540 PLGVILMFVFNEVDYLSTTPLLRLPTFWLVMTLSGFLGLAISFSSMWFLHQTGATTYSLV 599

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS 289
           GSLNKIPLSVAGI+LF VPTSLENSASIFFGL+AGVFFA+AKM ERSQS
Sbjct: 600 GSLNKIPLSVAGIVLFHVPTSLENSASIFFGLVAGVFFAKAKMRERSQS 648

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080961|ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|222855694|gb|EEE93241.1| predicted protein [Populus trichocarpa]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/287 (89%), Positives = 275/287 (95%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK+VLS Y+F+AGISLM+YQNFISV+ V+ L FLGVISTEPLTWRLIKVWLPVN I
Sbjct: 50  MILVNKYVLSSYDFNAGISLMLYQNFISVIIVSTLRFLGVISTEPLTWRLIKVWLPVNFI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITA+GEMYLF K HD+RVWAALFLMIISAIS
Sbjct: 110 FVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFQKDHDSRVWAALFLMIISAIS 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSFHAVGYAWQI+NCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV+LNN+LSL
Sbjct: 170 GGITDLSFHAVGYAWQILNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVMLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG++L+ VFNEVDYLSRTPLLRLP+FWLV+TLSGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGLILIFVFNEVDYLSRTPLLRLPTFWLVVTLSGFLGLAISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLSVAGILLF VPTSL+NSASI FGLLAGV FARAKM ERS
Sbjct: 290 GSLNKIPLSVAGILLFHVPTSLQNSASILFGLLAGVIFARAKMRERS 336

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449513327|ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 255/287 (88%), Positives = 272/287 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLMVYQNFISV  VTILS +G+ISTEPLTWRL+KVW+PVNVI
Sbjct: 50  MILVNKLVLSSYDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWMPVNVI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITS+FSLKYINVAMVTVLKNVTNVITAVGEMYLF K HDNRVWAALFLMIISAI+
Sbjct: 110 FVGMLITSIFSLKYINVAMVTVLKNVTNVITAVGEMYLFGKHHDNRVWAALFLMIISAIT 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GG+TDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ+TKSGNLNEFSMVLLNN+LSL
Sbjct: 170 GGLTDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQLTKSGNLNEFSMVLLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ LV VFNE+DYLSRTPLLRLP FWLV+T SG LGL ISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGIFLVFVFNEIDYLSRTPLLRLPMFWLVITFSGVLGLGISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLS+AGI LFKVPTS+ENSASIFFGLLAGVFFARAK+ ERS
Sbjct: 290 GSLNKIPLSIAGIFLFKVPTSVENSASIFFGLLAGVFFARAKIRERS 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093398|ref|XP_002309911.1| predicted protein [Populus trichocarpa] gi|222852814|gb|EEE90361.1| predicted protein [Populus trichocarpa]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/283 (89%), Positives = 271/283 (95%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK+VLS Y+F+AGISLM+YQNFISV+ V+ LSFLGVISTEPLTWRLIKVWLPVN I
Sbjct: 18  MILVNKYVLSSYDFNAGISLMLYQNFISVIIVSTLSFLGVISTEPLTWRLIKVWLPVNFI 77

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVT+LKNVTNVITAVGEMYLF K HD+RVWAALFLMIISAIS
Sbjct: 78  FVGMLVTSMFSLKYINVAMVTILKNVTNVITAVGEMYLFQKDHDSRVWAALFLMIISAIS 137

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK VTKSGNLNEFSMV+LNN+LSL
Sbjct: 138 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKHVTKSGNLNEFSMVMLNNTLSL 197

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG++L+ VFNEVDYLSRTPLLRLP+FW V+TLSGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 198 PLGLILIFVFNEVDYLSRTPLLRLPTFWFVVTLSGFLGLAISFTSMWFLHQTGATTYSLV 257

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM 283
           GSLNKIPLSVAGI LF VPTSL+NSASI FGLLAGVFFARAKM
Sbjct: 258 GSLNKIPLSVAGIFLFHVPTSLQNSASILFGLLAGVFFARAKM 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459266|ref|XP_004147367.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/288 (88%), Positives = 271/288 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLMVYQNFISV  VTILS +G+ISTEPLTWRL+KVW+PVNVI
Sbjct: 50  MILVNKLVLSSYDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWMPVNVI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITS+FSLKYINVAMVTVLKNVTNVITAVGEMYLF K HDNRVWAALFLMIISAI+
Sbjct: 110 FVGMLITSIFSLKYINVAMVTVLKNVTNVITAVGEMYLFGKHHDNRVWAALFLMIISAIT 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GG+TDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ+TKSGNLNEFSMVLLNN+LSL
Sbjct: 170 GGLTDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQLTKSGNLNEFSMVLLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ LV VFNE+DYLSRTPLLRLP FWLV+T SG LGL ISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGIFLVFVFNEIDYLSRTPLLRLPMFWLVITFSGVLGLGISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ 288
           GSLNKIPLS+AGI LFKVPTS+ENSASIFFGLLAGVFFARAK+ ER  
Sbjct: 290 GSLNKIPLSIAGIFLFKVPTSVENSASIFFGLLAGVFFARAKIRERKN 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507466|ref|XP_003522487.1| PREDICTED: GDP-mannose transporter GONST1-like [Glycine max]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/289 (86%), Positives = 271/289 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLM+YQN ISV  V++LS LG++STEPLTWRLIKVWLPVN I
Sbjct: 52  MILVNKLVLSSYDFNAGISLMLYQNLISVAIVSVLSLLGLVSTEPLTWRLIKVWLPVNFI 111

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVTVLKNVTNVITA+GEMYLF K HD +VWA+LFLMIISAI+
Sbjct: 112 FVGMLVTSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGKVWASLFLMIISAIT 171

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQ +NCFLTASYSL L+RVMDTAKQVTKSGNLNEFSMVLLNN+LS+
Sbjct: 172 GGITDLSFNAVGYAWQTLNCFLTASYSLMLQRVMDTAKQVTKSGNLNEFSMVLLNNTLSV 231

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ L+IVFNE+DYL  TPLLRLPSFWLVMT SGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 232 PLGIFLIIVFNEMDYLLSTPLLRLPSFWLVMTFSGFLGLAISFTSMWFLHQTGATTYSLV 291

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS 289
           GSLNKIPLS+AGILLFKVPTSLENSASI FGLLAGVFFARAK+ ERSQS
Sbjct: 292 GSLNKIPLSIAGILLFKVPTSLENSASILFGLLAGVFFARAKIRERSQS 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464677|ref|XP_003602620.1| GDP-mannose transporter [Medicago truncatula] gi|355491668|gb|AES72871.1| GDP-mannose transporter [Medicago truncatula]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/289 (87%), Positives = 272/289 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS Y+F+AGISLMVYQNFISV+ V++LS LG++STEPLTWRLIKVW PVNVI
Sbjct: 54  MILVNKFVLSSYDFNAGISLMVYQNFISVIIVSVLSLLGLVSTEPLTWRLIKVWFPVNVI 113

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLF+K H+ RVWAALFLMIISAI+
Sbjct: 114 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFSKHHEGRVWAALFLMIISAIT 173

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+A GY WQ +NCFLTASYSLTLRRVMDTAKQ TKSGNLNEF+MVLLNN+LSL
Sbjct: 174 GGITDLSFNATGYVWQTLNCFLTASYSLTLRRVMDTAKQYTKSGNLNEFTMVLLNNTLSL 233

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ L++VFNEVDYL RTPLLRLPSFWLVMT SG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 234 PLGIFLMLVFNEVDYLLRTPLLRLPSFWLVMTFSGVLGLAISFTSMWFLHQTGATTYSLV 293

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS 289
           GSLNKIPLSVAGILLFKVPTSLENSASI FGLLAGV FARAK+ ERSQS
Sbjct: 294 GSLNKIPLSVAGILLFKVPTSLENSASILFGLLAGVLFARAKIRERSQS 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836010|ref|XP_002885887.1| GONST1 [Arabidopsis lyrata subsp. lyrata] gi|297331727|gb|EFH62146.1| GONST1 [Arabidopsis lyrata subsp. lyrata]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/287 (85%), Positives = 268/287 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 46  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 105

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 106 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 165

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 166 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 225

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 226 PLGLLLSFSFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 285

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLS+AGI+LF VPTSL+NSASI FGL+AGV FARAKM E+S
Sbjct: 286 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKMREKS 332

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397301|ref|NP_565357.1| GDP-mannose transporter [Arabidopsis thaliana] gi|334184214|ref|NP_001189524.1| GDP-mannose transporter [Arabidopsis thaliana] gi|26006780|sp|Q941R4.2|GONS1_ARATH RecName: Full=GDP-mannose transporter GONST1; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1 gi|20198047|gb|AAD22687.2| putative vanadate resistance protein [Arabidopsis thaliana] gi|330251156|gb|AEC06250.1| GDP-mannose transporter [Arabidopsis thaliana] gi|330251158|gb|AEC06252.1| GDP-mannose transporter [Arabidopsis thaliana]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/287 (85%), Positives = 268/287 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLS+AGI+LF VPTSL+NSASI FGL+AGV FARAKM E+S
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKMREKS 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15487237|emb|CAC69066.1| GDP-Mannose transporter [Arabidopsis thaliana]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/287 (85%), Positives = 268/287 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
           GSLNKIPLS+AGI+LF VPTSL+NSASI FGL+AGV FARAKM E+S
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKMREKS 333

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2054090	333	GONST1 "AT2G13650" [Arabidopsi	0.989	0.861	0.853	3.3e-127
TAIR|locus:2025047	375	GONST2 "AT1G07290" [Arabidopsi	0.975	0.754	0.685	1.2e-104
POMBASE|SPAC144.18	345	vrg4 "Golgi GDP-mannose transp	0.962	0.808	0.316	1e-36
CGD|CAL0002875	371	VRG4 [Candida albicans (taxid:	0.962	0.752	0.307	2.7e-36
UNIPROTKB|Q5A477	371	VRG4 "GDP-mannose transporter"	0.962	0.752	0.307	2.7e-36
ASPGD|ASPL0000072017	379	gmtA [Emericella nidulans (tax	0.955	0.730	0.285	1.5e-33
SGD|S000003193	337	VRG4 "Golgi GDP-mannose transp	0.941	0.810	0.295	3.3e-31
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.924	0.701	0.250	4e-26
SGD|S000000841	249	HVG1 "Protein of unknown funct	0.724	0.843	0.305	2.6e-24
DICTYBASE|DDB_G0277007	368	DDB_G0277007 "GDP-fucose trans	0.920	0.725	0.239	3.9e-21

TAIR|locus:2054090 GONST1 "AT2G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
 Identities = 245/287 (85%), Positives = 268/287 (93%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct:    47 MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
             FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct:   107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query:   121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
             GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct:   167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query:   181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
             PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct:   227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query:   241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERS 287
             GSLNKIPLS+AGI+LF VPTSL+NSASI FGL+AGV FARAKM E+S
Sbjct:   287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKMREKS 333

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI;IDA;IMP

TAIR|locus:2025047 GONST2 "AT1G07290" [Arabidopsis thaliana (taxid:3702)]

 Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
 Identities = 194/283 (68%), Positives = 235/283 (83%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             MI++NK VLS YNF+AG+SLM+YQN IS + V +L   GV+S E   W+LI+VW+PVNVI
Sbjct:    92 MIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVI 151

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
             FVGML++ M+SLKYINVAMVT+LKN TN++T +GE+Y+F KR +N+VWAA+F+MIISAIS
Sbjct:   152 FVGMLVSGMYSLKYINVAMVTILKNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAIS 211

Query:   121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
             GGITDL+F AVGY WQ+ NCFLTASYSLTLRRVMD AKQ TKSG+LNE SMVLLNN LS+
Sbjct:   212 GGITDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSI 271

Query:   181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
             P G++L+I+  E  Y+  T + +   FW+V T SGFLGLAISFTSMWFLHQTG TTYSLV
Sbjct:   272 PFGIILIILLGEWRYVISTDVTKDSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLV 331

Query:   241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM 283
             GSLNK+P+S+AG++LF VP SL N  SI FGL AGV FARAKM
Sbjct:   332 GSLNKVPISLAGLVLFNVPLSLPNLFSILFGLFAGVVFARAKM 374

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0015784 "GDP-mannose transport" evidence=IGI

POMBASE|SPAC144.18 vrg4 "Golgi GDP-mannose transporter Vrg4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 95/300 (31%), Positives = 162/300 (54%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M L NK+VLS   ++    L+  Q+ + V  + IL  L VI+     +R  K W P++ +
Sbjct:    27 MTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGILKRLKVINYRDFDFREAKFWFPISFL 86

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ T+  +L++++V + T+ KN+T +I A GE+  F          +  LM++S+I 
Sbjct:    87 LVAMIYTASKALQFLSVPVYTIFKNLTIIIIAYGEVLWFGGHVTALTLFSFGLMVLSSIV 146

Query:   121 GGITDL---SFHAV----GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
                 D+   SF +     GY W ++NC   A++ L +R      K++ K  N  +F  + 
Sbjct:   147 AAWADIQSSSFASQTLNSGYLWMVLNCLTNAAFVLAMR------KRI-KLTNFRDFDTMF 199

Query:   174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLP---SFWLVMTL--SGFLGLAISFTSMWF 228
              NN LS+P+ V+  + F E D+ +       P    F ++M +  SG   + IS+TS W 
Sbjct:   200 YNNLLSIPVLVICTL-FTE-DWSAENIAQNFPPDAKFGVLMAMAISGVSSVGISYTSAWC 257

Query:   229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ 288
             +  T +TTYS+VG+LNK+PL++AG++ F  P +  +  +I  G ++GV +A AK  ++ Q
Sbjct:   258 VRVTSSTTYSMVGALNKLPLAIAGLVFFDAPITFGSVTAILLGFISGVVYAVAKSQQQRQ 317

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0002875 VRG4 [Candida albicans (taxid:5476)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 93/302 (30%), Positives = 164/302 (54%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NK+VLSG++F+    L+  Q+ + +VT+  L  L +I+         K W P+  +
Sbjct:    70 MTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDEAKKWSPIAFL 129

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  +      ++  LM++S++ 
Sbjct:   130 LVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSSFLLMVLSSVI 189

Query:   121 GGITD---LSFHA------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSM 171
                 D   +  H       +GY W + NCF +A++ L +R      K++ K  N  +F  
Sbjct:   190 AYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMR------KRI-KLTNFKDFDT 242

Query:   172 VLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT-----LSGFLGLAISFTSM 226
             +  NN LS+P  +LL+  F   D+ S    L  P+   V T     LSG   + IS+ S 
Sbjct:   243 MYYNNLLSIP--ILLICSFIFEDWSSANVSLNFPADNRVTTITAMILSGASSVGISYCSA 300

Query:   227 WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER 286
             W +  T +TTYS+VG+LNK+P++++G++ F+   +  + +SIF G  AG+ +A AK  ++
Sbjct:   301 WCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVGFGAGLVYAVAKQKQQ 360

Query:   287 SQ 288
              +
Sbjct:   361 KE 362

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

GO:0006486 "protein glycosylation" evidence=IMP

GO:0005739 "mitochondrion" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

UNIPROTKB|Q5A477 VRG4 "GDP-mannose transporter" [Candida albicans SC5314 (taxid:237561)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 93/302 (30%), Positives = 164/302 (54%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NK+VLSG++F+    L+  Q+ + +VT+  L  L +I+         K W P+  +
Sbjct:    70 MTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDEAKKWSPIAFL 129

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  +      ++  LM++S++ 
Sbjct:   130 LVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSSFLLMVLSSVI 189

Query:   121 GGITD---LSFHA------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSM 171
                 D   +  H       +GY W + NCF +A++ L +R      K++ K  N  +F  
Sbjct:   190 AYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMR------KRI-KLTNFKDFDT 242

Query:   172 VLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT-----LSGFLGLAISFTSM 226
             +  NN LS+P  +LL+  F   D+ S    L  P+   V T     LSG   + IS+ S 
Sbjct:   243 MYYNNLLSIP--ILLICSFIFEDWSSANVSLNFPADNRVTTITAMILSGASSVGISYCSA 300

Query:   227 WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER 286
             W +  T +TTYS+VG+LNK+P++++G++ F+   +  + +SIF G  AG+ +A AK  ++
Sbjct:   301 WCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVGFGAGLVYAVAKQKQQ 360

Query:   287 SQ 288
              +
Sbjct:   361 KE 362

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IMP

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

ASPGD|ASPL0000072017 gmtA [Emericella nidulans (taxid:162425)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 88/308 (28%), Positives = 160/308 (51%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M ++NK+VLS  +F+    L+  Q+ + ++ + +    G+I+         + W P+ ++
Sbjct:    58 MTVMNKYVLSS-DFNLNFFLLCVQSLVCIIAIQLCKACGLITYRDFNLDEARKWFPITLL 116

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F     N    +  LM+ S+I 
Sbjct:   117 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTNLTLFSFGLMVFSSII 176

Query:   121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
                 D+  HA+               GY W +INC  T+SY L +R      K++ K  N
Sbjct:   177 AAWADIK-HAIESSGDATSKVSTLNAGYIWMLINCLCTSSYVLGMR------KRI-KLTN 228

Query:   166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
               +F  +  NN LS+P  VL+V      D+         PS         M LSG   + 
Sbjct:   229 FKDFDTMFYNNLLSIP--VLIVCSGILEDWSPANVARNFPSADRNGIMFAMILSGLSTVF 286

Query:   221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
             IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G ++G+ +A 
Sbjct:   287 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIMVGFVSGIVYAV 346

Query:   281 AKMWERSQ 288
             AK+ + ++
Sbjct:   347 AKIKQNAK 354

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IEA

GO:0051278 "fungal-type cell wall polysaccharide biosynthetic process" evidence=IEA

SGD|S000003193 VRG4 "Golgi GDP-mannose transporter" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 89/301 (29%), Positives = 155/301 (51%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NKFV++  +F+    ++  Q+ +  +T+ IL  LG      L     K W P++ +
Sbjct:    35 MTVTNKFVVNLKDFNMNFVMLFVQSLVCTITLIILRILGYAKFRSLNKTDAKNWFPISFL 94

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAI- 119
              V M+ TS  +L+Y+ V + T+ KN+T ++ A GE+  F     +   ++  LM++S++ 
Sbjct:    95 LVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVV 154

Query:   120 ------------SGGITDLSFHAV-----GYAWQIINCFLTASYSLTLRRVMDTAKQVTK 162
                         +  + + +  AV     GY W   NC  +A + L +R      K++ K
Sbjct:   155 ATWGDQQAVAAKAASLAEGAAGAVASFNPGYFWMFTNCITSALFVLIMR------KRI-K 207

Query:   163 SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV-MTLSGFLGLAI 221
               N  +F  +  NN L+LP  +LL+  F   D+ S        +  L  M +SG   + I
Sbjct:   208 LTNFKDFDTMFYNNVLALP--ILLLFSFCVEDWSSVNLTNNFSNDSLTAMIISGVASVGI 265

Query:   222 SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA 281
             S+ S W +  T +TTYS+VG+LNK+P++++G++ F  P +  +  SIF G L+G+ +A A
Sbjct:   266 SYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVA 325

Query:   282 K 282
             K
Sbjct:   326 K 326

GO:0005739 "mitochondrion" evidence=IDA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IMP;IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IMP

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 70/279 (25%), Positives = 143/279 (51%)

Query:     7 FVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEP-LTWRLIKVWLPVNVIFVGML 65
             +V++ Y+F A   L+  Q  +++V + IL    ++          IK  +P++  ++  +
Sbjct:   110 YVMTTYDFSASNFLLFNQMVVTIVILHILKHFNILKINTNFEKETIKKLMPLSFCYIINV 169

Query:    66 ITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD 125
             +  + SLK +N+ M + LK +  V+  V E ++  K    ++ A++ +M+I A+  GITD
Sbjct:   170 LLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKIIASVVVMVIGAVVAGITD 229

Query:   126 LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVL 185
             LSF+++GY+  +++C   ASY + +++V         + N++ + M+  N+ LSLP+ + 
Sbjct:   230 LSFNSLGYSLVLLSCIFQASYLIYVKKV---------ASNMSTYDMLYYNSVLSLPITIF 280

Query:   186 LVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK 245
             L+IV  E++Y      L   SF     LS FLG  ++F   +        T S+ G +  
Sbjct:   281 LMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKN 340

Query:   246 IPLSVAGILLFK-VPTSLENSASIFFGLLAGVFFARAKM 283
             I  ++ G ++F  +     N   +   ++  ++++  K+
Sbjct:   341 IASTIIGAMVFNDIIIHPINILGLIINIIGSIWYSFLKL 379

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

SGD|S000000841 HVG1 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 74/242 (30%), Positives = 128/242 (52%)

Query:    64 MLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAI---- 119
             M+ TS  SL+Y+ V + T+ KN+T ++ A GE+  F  +  +    +  +M++S++    
Sbjct:     1 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGKVTSMELTSFIMMVLSSVVATW 60

Query:   120 ---------SGGITDLSFHAV---------GYAWQIINCFLTASYSLTLRRVMDTAKQVT 161
                      +  + DL    V         GY W   NC  +A + L +R+ +    ++T
Sbjct:    61 GDQQAIAIKASSLEDLDQELVESTIFVLNPGYLWMFTNCISSALFVLIMRKRI----RLT 116

Query:   162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV-MTLSGFLGLA 220
                N  ++  +  NN L+LPL  LLV  F   D+ ++   + L +  L  M +SG + + 
Sbjct:   117 ---NFKDYDTMFYNNVLALPL--LLVFSFIMEDWSTKNLSVNLSADSLAAMVISGLMSVG 171

Query:   221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR 280
             IS+ S W +  T +TTYS+VG+LNK+P+++AG++ F  P +  +  SIF G L+G+ +A 
Sbjct:   172 ISYCSGWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPKNFLSFFSIFLGFLSGLLYAV 231

Query:   281 AK 282
             AK
Sbjct:   232 AK 233

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015780 "nucleotide-sugar transport" evidence=IEA

DICTYBASE|DDB_G0277007 DDB_G0277007 "GDP-fucose transporter" [Dictyostelium discoideum (taxid:44689)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 69/288 (23%), Positives = 139/288 (48%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTI----------LSFLGVISTEPLTWRL 50
             ++ +NK +LS + F+  + +  YQ  IS V++ I          LSFL     +  T   
Sbjct:    81 LVFLNKILLSDFKFEYPLFITWYQQIISFVSIYIMTSISKSVPALSFLPEFEFKSAT--A 138

Query:    51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAA 110
              KV LPV  +  GM+I +   L+Y+ V+   V +++T   + +    +   +   R   A
Sbjct:   139 SKV-LPVTAVLTGMVIFNNLCLEYVEVSFYQVARSLTICFSLILTYIVLKSKTSYRATMA 197

Query:   111 LFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFS 170
               ++ +  + G   +++F  +G  + +++ F  A YS+ ++RV+         GN  E+ 
Sbjct:   198 CLVVFLGFVLGSAGEVNFSWLGIIFGLLSSFFVALYSIAVKRVLPAV-----DGN--EWR 250

Query:   171 MVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLH 230
             + + N ++S+ L   L++V  E + +   PLL   +FW  MT++G +G  IS +    + 
Sbjct:   251 LSIYNTAISIGLIFPLILVSGEANTILDEPLLYSGTFWFYMTVAGLMGYLISISVFMQIK 310

Query:   231 QTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFF 278
              T   T ++ G++     ++  ++ +  P S +N+  I   ++ G F+
Sbjct:   311 HTSPLTNTISGTVKACVQTILAVVFWGNPISTQNAVGILL-VIGGSFW 357

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2AAF6	GMT_PICPA	No assigned EC number	0.3056	0.9620	0.8480	yes	no
Q941R4	GONS1_ARATH	No assigned EC number	0.8536	0.9896	0.8618	yes	no
A3LWX1	GMT_PICST	No assigned EC number	0.3069	0.9620	0.8532	yes	no
Q9UTK8	GMT_SCHPO	No assigned EC number	0.31	0.9620	0.8086	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	2e-38

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score =  136 bits (345), Expect = 2e-38
 Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 18/295 (6%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M L NK+VLS   F+    L+  Q+ + VV + IL FL ++          K W P++ +
Sbjct: 21  MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFL 77

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ TS  SL+Y+ V + T+ KN+T ++ A GE+  F  R  +    +  LM++S++ 
Sbjct: 78  LVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVV 137

Query: 121 GGITDLSFHA-------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
               D    A        GY W   NC  +A++ L +R+ +          N  +F  + 
Sbjct: 138 ATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT-------NFKDFDTMF 190

Query: 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTG 233
            NN LSLP+ +    +F +    +    L      + M +SG   + IS+ S W +  T 
Sbjct: 191 YNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCSVGISYCSAWCVRVTS 249

Query: 234 ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ 288
           +TTYS+VG+LNK+P+++AG++ F  P +  +  SI  G L+G  +A AK  ++  
Sbjct: 250 STTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.97
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.92
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.9
KOG1580	337	consensus UDP-galactose transporter related protei	99.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.86
KOG1581	327	consensus UDP-galactose transporter related protei	99.85
KOG1582	367	consensus UDP-galactose transporter related protei	99.81
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.79
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.78
KOG2765	416	consensus Predicted membrane protein [Function unk	99.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.77
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.76
COG2962	293	RarD Predicted permeases [General function predict	99.76
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.7
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.51
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.42
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.41
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.22
KOG2766	336	consensus Predicted membrane protein [Function unk	99.16
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.16
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.13
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.04
COG2510	140	Predicted membrane protein [Function unknown]	98.99
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.89
PRK15430	296	putative chloramphenical resistance permease RarD;	98.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.83
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.72
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.55
PLN00411	358	nodulin MtN21 family protein; Provisional	98.54
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.44
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
COG2962	293	RarD Predicted permeases [General function predict	98.37
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.33
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.32
PRK11272	292	putative DMT superfamily transporter inner membran	98.28
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.26
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.25
PRK11689	295	aromatic amino acid exporter; Provisional	98.2
PRK13499	345	rhamnose-proton symporter; Provisional	98.19
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.12
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.99
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.9
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.88
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.85
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.83
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.78
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.61
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.53
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.53
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.45
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.43
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.39
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.33
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.29
COG2076	106	EmrE Membrane transporters of cations and cationic	97.25
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.24
PRK11431	105	multidrug efflux system protein; Provisional	97.22
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.12
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.05
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.02
COG2076	106	EmrE Membrane transporters of cations and cationic	96.88
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.86
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.84
PRK11431	105	multidrug efflux system protein; Provisional	96.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.67
PRK13499	345	rhamnose-proton symporter; Provisional	96.58
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.11
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.99
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.11
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.99
KOG2765	416	consensus Predicted membrane protein [Function unk	94.62
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.52
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	93.91
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.99
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	91.91
KOG1580	337	consensus UDP-galactose transporter related protei	91.66
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.5
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	91.29
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	90.69
KOG1581	327	consensus UDP-galactose transporter related protei	89.85
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.11
KOG2922	335	consensus Uncharacterized conserved protein [Funct	88.99
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	87.95

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=2.3e-38  Score=278.06  Aligned_cols=279  Identities=15%  Similarity=0.186  Sum_probs=228.6

Q ss_pred             eeeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 022936            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVT   81 (290)
Q Consensus         2 ~~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~   81 (290)
                      ++.||++++  ++++|..+++.|+.++.+.+.+.+..+..++++.++++++..++.|++++.++.++|.+++|+++++++
T Consensus        18 ~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        18 NIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            468999998  688899999999999987776654334445567789999999999999999999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 022936           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT  161 (290)
Q Consensus        82 ~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~  161 (290)
                      ++++++|+++++++++++|||++++++.++++++.|+.+....|.+++..|+++++.+++++|+|+++.||.+++     
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~-----  170 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTI-----  170 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Confidence            999999999999999999999999999999999999998876666777789999999999999999999998652     


Q ss_pred             ccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhh-cC-C---CCcchhHHHHHHHHHH-HHHHHHHHHHHHHhhcCcc
Q 022936          162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLS-RT-P---LLRLPSFWLVMTLSGF-LGLAISFTSMWFLHQTGAT  235 (290)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~  235 (290)
                        +++++.+...|++..+.+.+.|.....++.+... +. +   .......+...+..+. +....+...+.+++++||+
T Consensus       171 --~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~  248 (302)
T TIGR00817       171 --KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL  248 (302)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence              2578889999999988888888876555432111 00 0   0111122332333443 2233344556799999999


Q ss_pred             hhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccCC
Q 022936          236 TYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS  289 (290)
Q Consensus       236 ~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~~  289 (290)
                      ++++.+++||++++++|++++||++|..+++|.++++.|+.+|++.|+||+++|
T Consensus       249 t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~~  302 (302)
T TIGR00817       249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKPK  302 (302)
T ss_pred             HHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCCC
Confidence            999999999999999999999999999999999999999999998877666654

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.8e-37  Score=260.22  Aligned_cols=282  Identities=41%  Similarity=0.690  Sum_probs=255.1

Q ss_pred             CeeeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 022936            1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (290)
Q Consensus         1 ~~~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (290)
                      |+++||++++.++||-.+++..+|.+++.+.++.+...|..+.++++++..|+++|.++++.++.+.+.++++|+|++++
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~  106 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF  106 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence            57899999997777655666669999999999999988988999999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        81 ~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      +++|+.+|+++++.+..++|.||++..|.++....+|.......|.+++..|+.|++.+.++.+.+.++.||..+     
T Consensus       107 tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd-----  181 (314)
T KOG1444|consen  107 TVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVD-----  181 (314)
T ss_pred             HHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence            999999999999999999999999999999999999999999999999988999999999999999999999876     


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhh-hcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si  239 (290)
                        ..+.+.+++++|+++.+.|.+.......||++.. .+.+.+....++..+.++|++++.++|+.+++.+.+|+++.++
T Consensus       182 --~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~ti  259 (314)
T KOG1444|consen  182 --SANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTI  259 (314)
T ss_pred             --cccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceee
Confidence              3467889999999999999999999999998722 2334455667788899999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccCC
Q 022936          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS  289 (290)
Q Consensus       240 ~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~~  289 (290)
                      ++......+.+.+.+++|++.++.+.+|+.+.+.|.++|++.+.|+|+.+
T Consensus       260 vG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  260 VGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             hhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            99766777777777777899999999999999999999999987776654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=6e-36  Score=266.87  Aligned_cols=277  Identities=14%  Similarity=0.202  Sum_probs=227.6

Q ss_pred             eeeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCccc--HHHHHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 022936            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLT--WRLIKVWLPVNVIFVGMLITSMFSLKYINVAM   79 (290)
Q Consensus         2 ~~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~   79 (290)
                      ++.||++++  .+|+|.+++++|++++.+.+.+++..+.+++++.+  +++++..++.|+++...+...+.|++++++++
T Consensus        65 ~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~  142 (350)
T PTZ00343         65 VVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSF  142 (350)
T ss_pred             HHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence            467999999  68999999999999998766555544444444553  45789999999998877777889999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 022936           80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ  159 (290)
Q Consensus        80 ~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~  159 (290)
                      +++++++.|+++++++++++|||++++++.+++++++|+.++...|.++++.|++++++|++++|+|+++.||.+++.++
T Consensus       143 ~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~  222 (350)
T PTZ00343        143 THVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSE  222 (350)
T ss_pred             HHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999999988888888899999999999999999999998864221


Q ss_pred             ccccCCCChhHHHHHHHHhHHHHHHHHHHHhcch--hhhh-----cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 022936          160 VTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEV--DYLS-----RTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT  232 (290)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (290)
                        +++++++.+...+.+..+..+++|.....|+.  ...+     ..+.+....++..++.++++.+..+.+.+.+++++
T Consensus       223 --~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~  300 (350)
T PTZ00343        223 --IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKV  300 (350)
T ss_pred             --ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence              11245666666777888888888877654422  1111     01111112334456667888888888888999999


Q ss_pred             CcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       233 ~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                      +|.++++.+++||++++++|++++||++|+.+++|.++++.|+++|++.|
T Consensus       301 s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        301 NQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             chhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999998764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=7.8e-36  Score=257.00  Aligned_cols=282  Identities=20%  Similarity=0.378  Sum_probs=244.3

Q ss_pred             eeeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccH-HHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 022936            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTW-RLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (290)
Q Consensus         2 ~~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (290)
                      ++.||++++.++|++|.+++..|.+++.+........+..+.++.++ ..++..+++|++++++..++|.|+++++++++
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~  112 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFY  112 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHH
Confidence            67899999988999999999999999999888887777766666544 57899999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        81 ~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      |++|+++|+++.++++++.+|++++..+.+++.+..|+.+.+..|.++|+.|...++++.+..+.++++.|+.++.    
T Consensus       113 q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~----  188 (316)
T KOG1441|consen  113 QTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTS----  188 (316)
T ss_pred             HHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhc----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999863    


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHH-HHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGV-LLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si  239 (290)
                       |+++.|+.+..+|++-.++..++ |+....+............+..++.. ++..++++.+|...++.++++||.|.++
T Consensus       189 -~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sv~~f~~Nls~f~~ig~tSalT~~V  266 (316)
T KOG1441|consen  189 -KGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-LLNSVLAFLLNLSAFLVIGRTSALTYSV  266 (316)
T ss_pred             -cccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-HHHHHHHHHHHHHHHHHHcccCchhhhh
Confidence             34678999999999988888887 66543222111100111112223433 4444999999999999999999999999


Q ss_pred             hhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccCC
Q 022936          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQS  289 (290)
Q Consensus       240 ~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~~  289 (290)
                      .+.+|.++.++.|+++|+|+.|+.+..|+++.++|+.+|++.|.|+++++
T Consensus       267 ~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~~  316 (316)
T KOG1441|consen  267 AGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKGK  316 (316)
T ss_pred             hccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhccC
Confidence            99999999999999999999999999999999999999999998887653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=1.7e-29  Score=221.68  Aligned_cols=262  Identities=19%  Similarity=0.202  Sum_probs=222.1

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHH
Q 022936           15 DAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG   94 (290)
Q Consensus        15 ~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll   94 (290)
                      ++|.++++.|+....+...+.....+  .++.++..++++.+.++++.++..++|.|++|+|.|++++.|++.|++++++
T Consensus        30 ~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   30 PFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            47999999999999887766554333  2233445578889999999999999999999999999999999999999999


Q ss_pred             HHHHhCccCChHHHHHHHHHHHhhhhheecccc----c------chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccC
Q 022936           95 EMYLFNKRHDNRVWAALFLMIISAISGGITDLS----F------HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSG  164 (290)
Q Consensus        95 ~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~----~------~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~  164 (290)
                      +.+++|||++++++.++++..+|+++....|.+    .      +..|+++.+.+.+++|++.++.+|.++++       
T Consensus       108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-------  180 (303)
T PF08449_consen  108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY-------  180 (303)
T ss_pred             HHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence            999999999999999999999999998765431    1      12399999999999999999999998743       


Q ss_pred             CCChhHHHHHHHHhHHHHHHHHHHH--hcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhh
Q 022936          165 NLNEFSMVLLNNSLSLPLGVLLVIV--FNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGS  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~  242 (290)
                      +.+++++++|+|..+.|...+....  .+|..+..+... .++..+..++..++++...+...+..+++.||++.+++.+
T Consensus       181 ~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t  259 (303)
T PF08449_consen  181 GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTT  259 (303)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHH
Confidence            4588999999999999998888777  566554433322 2334566777778888777777788999999999999999


Q ss_pred             hhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          243 LNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       243 ~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      +|++.++++++++||+++++.||.|+++++.|..+|++.|+|+|
T Consensus       260 ~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  260 LRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            99999999999999999999999999999999999999888765

; GO: 0055085 transmembrane transport

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=6e-29  Score=221.28  Aligned_cols=270  Identities=13%  Similarity=0.128  Sum_probs=202.2

Q ss_pred             eeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcC-c-cccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 022936            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLG-V-ISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (290)
Q Consensus         3 ~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (290)
                      ...|..++ .+.+ |..+.++|+.++.+++.+....+ + .+.++.+++++..+...+++....+.+.+.+++|++++.+
T Consensus        30 ~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~a  107 (358)
T PLN00411         30 TLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLA  107 (358)
T ss_pred             HHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            34577776 5888 99999999999987776654322 2 2334456778888888887776666788999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHH------hCccCChHHHHHHHHHHHhhhhheec-cc-----------------------ccc-
Q 022936           81 TVLKNVTNVITAVGEMYL------FNKRHDNRVWAALFLMIISAISGGIT-DL-----------------------SFH-  129 (290)
Q Consensus        81 ~~i~~~~pi~~~ll~~~~------~~e~~~~~~~~~~~l~~~G~~l~~~~-~~-----------------------~~~-  129 (290)
                      .++.+++|++++++++++      +|||++++++.++++++.|+.++... +.                       ..+ 
T Consensus       108 sll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (358)
T PLN00411        108 SAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW  187 (358)
T ss_pred             HHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccH
Confidence            999999999999999999      69999999999999999999986431 11                       012 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCh-hHHHHHHHHhHHHHHHHHHHHhcchh-hhhcCCCCcchhH
Q 022936          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE-FSMVLLNNSLSLPLGVLLVIVFNEVD-YLSRTPLLRLPSF  207 (290)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  207 (290)
                      ..|+++++.+++++|+|++..||..++         +++ ....+++...+.....+.....++.+ ..+. . ..+...
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~---------~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~~~  256 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSE---------YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI-I-HFDITL  256 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce-e-ccchHH
Confidence            349999999999999999999998663         322 24444444444433333333332211 1111 1 112233


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          208 WLVMTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       208 ~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      + .+++.++.+. ..|. .++++++.+|.+++++.+++|++++++|++++||++++.+++|.++++.|+.+.++.|+||.
T Consensus       257 ~-~i~y~~i~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~  334 (358)
T PLN00411        257 I-TIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEE  334 (358)
T ss_pred             H-HHHHHHHHHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3 3566676654 4554 45899999999999999999999999999999999999999999999999999998877774


Q ss_pred             c
Q 022936          287 S  287 (290)
Q Consensus       287 ~  287 (290)
                      +
T Consensus       335 ~  335 (358)
T PLN00411        335 K  335 (358)
T ss_pred             h
Confidence            3

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.97  E-value=5.9e-30  Score=204.01  Aligned_cols=275  Identities=32%  Similarity=0.581  Sum_probs=238.8

Q ss_pred             CeeeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 022936            1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (290)
Q Consensus         1 ~~~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (290)
                      |++.|||+++..+|.-.+++.+.|..++.+.+.++...|..++   +..+.|+++|.+++...+.+.+-.+++|.+++.+
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHH
Confidence            5678999999989988899999999999888888776664444   3567888999999999999999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccc-------hhhHHHHHHHHHHHHHHHHHHHHH
Q 022936           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFH-------AVGYAWQIINCFLTASYSLTLRRV  153 (290)
Q Consensus        81 ~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~-------~~G~~~~l~s~~~~a~~~v~~~~~  153 (290)
                      ++.++++.+.++..+..++|.|.+..+..+-.+.++......++|.+-.       ..|++|.+...+..+.|-...||.
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkr  177 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKR  177 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999988886321       279999999999999999999987


Q ss_pred             hhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 022936          154 MDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTG  233 (290)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  233 (290)
                      .+..       +....+.+||+|..+.|+++.+.+..|||+...-..... +.....+..+|++++...|+.-|+++.+|
T Consensus       178 i~lt-------Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~svgiSy~saWcvrVtS  249 (309)
T COG5070         178 IKLT-------NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCSVGISYCSAWCVRVTS  249 (309)
T ss_pred             hccc-------ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHHHhhhhhccceeEeehh
Confidence            6532       345578899999999999999999999987542222222 22234578899999999999999999999


Q ss_pred             cchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          234 ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       234 ~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      +++.++++.+++....+.|.++|||+.+.+.+..+.+..++...|.+.|++++
T Consensus       250 STtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         250 STTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             hhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999877654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=7.7e-31  Score=215.02  Aligned_cols=281  Identities=22%  Similarity=0.329  Sum_probs=248.2

Q ss_pred             Ceeeehhhhhc--cCCChhHHHHHHHHHHHHHHHHHHHHc-----CccccCc--ccHHHHHHHHHHHHHHHHHHHHhhhh
Q 022936            1 MILVNKFVLSG--YNFDAGISLMVYQNFISVVTVTILSFL-----GVISTEP--LTWRLIKVWLPVNVIFVGMLITSMFS   71 (290)
Q Consensus         1 ~~~~nK~~~~~--~~~~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a   71 (290)
                      +++.||++++.  ...+.|.+.++.|++++..++..+...     ++++.++  +|-+..++..|+++.+.++..++|++
T Consensus        43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc  122 (347)
T KOG1442|consen   43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC  122 (347)
T ss_pred             hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence            46899999996  357789999999999998777665432     2333343  55667889999999999999999999


Q ss_pred             hcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc---cccchhhHHHHHHHHHHHHHHHH
Q 022936           72 LKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSL  148 (290)
Q Consensus        72 l~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v  148 (290)
                      ++|+++++|.+-|+++.+|+.++++.++|+|-+.....++.+++.|-.+...+|   ...++.|.++++.|+++.|+..+
T Consensus       123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnai  202 (347)
T KOG1442|consen  123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAI  202 (347)
T ss_pred             hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998888888877666   45678999999999999999999


Q ss_pred             HHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 022936          149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWF  228 (290)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (290)
                      +.||.+...++       ..|...+|+|..++.+.+|...+.||....+.+|......||..+.++|+++|.++|...+=
T Consensus       203 ytkk~l~~v~~-------~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~Q  275 (347)
T KOG1442|consen  203 YTKKVLPPVGD-------CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQ  275 (347)
T ss_pred             hhheecccccC-------eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEE
Confidence            99998653221       46889999999999999999999999988888887777889999999999999999988888


Q ss_pred             HhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccC
Q 022936          229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ  288 (290)
Q Consensus       229 i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~  288 (290)
                      +|.+||.|+.+-++.|.....++++.+.+|.-+...|-|-.+++.|..+|++.|++|+++
T Consensus       276 IK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  276 IKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             EEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999988877544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=2.9e-26  Score=200.30  Aligned_cols=260  Identities=12%  Similarity=0.012  Sum_probs=201.7

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHH-HHHHHHhhhhh-cccchhHHH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSL-KYINVAMVT   81 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~~~~~~~~   81 (290)
                      ..|+..+  +.+ |..++++|+.++.+++.+....++.+  ..++++++.....+.+. ...+.+.+.+. ++++++.++
T Consensus        26 ~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~  100 (292)
T PRK11272         26 VIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAA  100 (292)
T ss_pred             HHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence            3576666  788 99999999999987776654433322  22456777777777664 56677778888 999999999


Q ss_pred             HHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-DLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        82 ~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      ++.++.|+++.+++++ +|||++++++.++++++.|+.+...+ +.+.+..|+++++.+++++|.|.++.||..+     
T Consensus       101 ~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~-----  174 (292)
T PRK11272        101 VVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPL-----  174 (292)
T ss_pred             HHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence            9999999999999986 79999999999999999999988643 3344567999999999999999999998632     


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHhhcCcchhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~si  239 (290)
                          + ++.....++...+.+...+.....++..     +...+...|..+++.++.+....+.. ++++++.++.+.++
T Consensus       175 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        175 ----P-VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             ----C-cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence                1 2233455666666666665544332211     11112344677788888887777755 47999999999999


Q ss_pred             hhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecc
Q 022936          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       240 ~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                      +..++|+.+++++++++||++++.+++|.++++.|+++.++.++|
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999998765443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=4.9e-26  Score=199.53  Aligned_cols=262  Identities=10%  Similarity=0.085  Sum_probs=190.4

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHH-HHHHHHhhhhhcc-cchhHHH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSLKY-INVAMVT   81 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~-~~~~~~~   81 (290)
                      ..|..++  +++ |..+.++|+.++.+.+.....  +   ++.+   ++..+..+++. .....+.+.++++ .+++.+.
T Consensus        22 ~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~--~---~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~   90 (299)
T PRK11453         22 VIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVA--R---PKVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS   90 (299)
T ss_pred             HHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhc--C---CCCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence            4577776  789 999999999887655433321  1   1112   22334445543 3455566778887 6889999


Q ss_pred             HHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc---cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 022936           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK  158 (290)
Q Consensus        82 ~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~  158 (290)
                      ++.++.|+++.+++++++|||++++++.+++++++|+.++..++   .+.+..|+.+++.+++++|.|.++.||..++  
T Consensus        91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~--  168 (299)
T PRK11453         91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSH--  168 (299)
T ss_pred             HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            99999999999999999999999999999999999999886432   2234579999999999999999999997542  


Q ss_pred             hccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhh-cCCCCcchhHHHHHHHHHHHHHHHHHHHH-HHHhhcCcch
Q 022936          159 QVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLS-RTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATT  236 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~  236 (290)
                          +.........+++...+...........++..... ... ..++..|..+++.++++....|..+ +++++.+|.+
T Consensus       169 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~  243 (299)
T PRK11453        169 ----STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLV-TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR  243 (299)
T ss_pred             ----cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence                11122233344444433332222222222211110 011 1234457788999999998888765 7899999999


Q ss_pred             hhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeec
Q 022936          237 YSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM  283 (290)
Q Consensus       237 ~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~  283 (290)
                      .+.+..++|++++++|++++||++++.+++|.++++.|+.+..+.++
T Consensus       244 ~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999999999998777655

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=1.6e-26  Score=202.20  Aligned_cols=252  Identities=12%  Similarity=0.050  Sum_probs=181.8

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhc----ccchhH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLK----YINVAM   79 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~~~~~~   79 (290)
                      ..|..++  ++| |..+.++|+..+.+++.+..  ++   ++.++++++..+..++.+...+.+.+.+++    +.++..
T Consensus        22 ~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~   93 (295)
T PRK11689         22 LIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTV--GF---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIE   93 (295)
T ss_pred             HHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHc--cc---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchH
Confidence            4688777  789 99999999999988776542  11   122222233333334445566666666664    467788


Q ss_pred             HHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccc-----------cchhhHHHHHHHHHHHHHHHH
Q 022936           80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS-----------FHAVGYAWQIINCFLTASYSL  148 (290)
Q Consensus        80 ~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~-----------~~~~G~~~~l~s~~~~a~~~v  148 (290)
                      +.++.++.|+++.+++++++|||++++++.++++++.|+.++..++.+           .+..|+++++.+++++|.|++
T Consensus        94 a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v  173 (295)
T PRK11689         94 VGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCN  173 (295)
T ss_pred             HHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999988654321           234699999999999999999


Q ss_pred             HHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHH-HHHH
Q 022936          149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISF-TSMW  227 (290)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  227 (290)
                      +.||..+         +.++....+  .. +...+.+.....++..    .+  .+...|..+++.++. ....| ..++
T Consensus       174 ~~k~~~~---------~~~~~~~~~--~~-~~~~l~~~~~~~~~~~----~~--~~~~~~~~l~~~~~~-t~~~~~l~~~  234 (295)
T PRK11689        174 VTRKYAR---------GKNGITLFF--IL-TALALWIKYFLSPQPA----MV--FSLPAIIKLLLAAAA-MGFGYAAWNV  234 (295)
T ss_pred             HHhhccC---------CCCchhHHH--HH-HHHHHHHHHHHhcCcc----cc--CCHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            9999743         234443322  12 2222222222222211    11  122345566677754 45455 4458


Q ss_pred             HHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          228 FLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       228 ~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                      ++|+.+|.+++...+++|++++++|++++||++++.+++|.++++.|+.+....+
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            9999999999999999999999999999999999999999999999988775543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=1.2e-25  Score=196.59  Aligned_cols=256  Identities=12%  Similarity=0.018  Sum_probs=196.7

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL   83 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i   83 (290)
                      ..|+.++  ++| |..+.++|+..+.+++.+..+.+   .++.++|+++..+..++++...+.+.+++++++|++.+.++
T Consensus        30 ~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l  103 (293)
T PRK10532         30 LAKSLFP--LVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVAL  103 (293)
T ss_pred             HHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence            4688887  688 99999999999987776554221   12446778888888888888888899999999999999999


Q ss_pred             HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec--c-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT--D-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        84 ~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~--~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      .++.|+++.+++    +||+++.  ..+.+++.|+.++...  + .+.+..|+++++.+++++|.|.+..||..+     
T Consensus       104 ~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~-----  172 (293)
T PRK10532        104 EFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGA-----  172 (293)
T ss_pred             HHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence            999999999877    3666554  4456778999876532  2 223567999999999999999999999854     


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHhhcCcchhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~si  239 (290)
                          +.++... .+....+.....+.....++ .     . ..+...|...++.|+++...+|.. ++++++.+|.++++
T Consensus       173 ----~~~~~~~-~~~~~~~~~~l~~~~~~~~~-~-----~-~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~  240 (293)
T PRK10532        173 ----EHGPATV-AIGSLIAALIFVPIGALQAG-E-----A-LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT  240 (293)
T ss_pred             ----cCCchHH-HHHHHHHHHHHHHHHHHccC-c-----c-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence                2345444 34445555555554443221 0     0 112234555678888888888865 58999999999999


Q ss_pred             hhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccC
Q 022936          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ  288 (290)
Q Consensus       240 ~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~  288 (290)
                      +.+++|++++++|++++||++++.+++|.++++.|++.+.+..+||.+-
T Consensus       241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~  289 (293)
T PRK10532        241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKI  289 (293)
T ss_pred             HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999999999999999999998776665443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=2e-25  Score=191.90  Aligned_cols=251  Identities=13%  Similarity=0.055  Sum_probs=196.6

Q ss_pred             eeehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHH-HHHHHHHHhhhhhcccchhHHH
Q 022936            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNV-IFVGMLITSMFSLKYINVAMVT   81 (290)
Q Consensus         3 ~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~   81 (290)
                      +..|+.+++ ..| |..+.+.|++++.+.+.+....+      .++++++.....+. ...+.+.+.++|+++++++.++
T Consensus         6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            356888873 566 99999999999887776554332      23445555556654 4678999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        82 ~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      ++.++.|+++++++++++|||++++++.++.+++.|+.++..++ .+.+..|+.+++.++++++.+.++.||..++    
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~----  153 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK----  153 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc----
Confidence            99999999999999999999999999999999999999876443 3445689999999999999999999998652    


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHhhcCcchhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL  239 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~si  239 (290)
                         .+.++.....+.+..+.+...+.....++..   .   . +...|..+++.++++....+.. ++++++.++.+.+.
T Consensus       154 ---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~---~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       154 ---EGPELLQFTGWVLLLGALLLLPFAWFLGPNP---Q---A-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---C---c-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence               1112333333556667776666655443221   1   1 2334556777788777666654 57999999999999


Q ss_pred             hhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhh
Q 022936          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAG  275 (290)
Q Consensus       240 ~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~  275 (290)
                      ..+.+|+.+.+++++++||++++.+++|+++++.|+
T Consensus       224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999886

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=2.2e-24  Score=188.77  Aligned_cols=251  Identities=11%  Similarity=0.048  Sum_probs=174.1

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHcCcc-cc--Ccc-cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHH
Q 022936           13 NFDAGISLMVYQNFISVVTVTILSFLGVI-ST--EPL-TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTN   88 (290)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p   88 (290)
                      +++ |..+.++|+.++.+++......++. +.  ++. +++++......+......+.+++++++++|++.+.++.++.|
T Consensus        32 ~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P  110 (296)
T PRK15430         32 YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINP  110 (296)
T ss_pred             CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence            688 9999999999998765544332211 10  011 233333333444557779999999999999999999999999


Q ss_pred             HHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCh
Q 022936           89 VITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE  168 (290)
Q Consensus        89 i~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~  168 (290)
                      +++.+++++++|||++++++.++++++.|+.++..++.+.    ..+++.+++++|.|.+..||..++       ...+.
T Consensus       111 i~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~-------~~~~~  179 (296)
T PRK15430        111 LVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVE-------AQTGM  179 (296)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCC-------CchhH
Confidence            9999999999999999999999999999999875432222    256888999999999998886321       11122


Q ss_pred             hHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHH
Q 022936          169 FSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPL  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~  248 (290)
                      .....+....+.+...    ...+.. . ......+...+...+..++.+...+.+.++++++.+|.+++.+.+++|+++
T Consensus       180 ~~~~~~~~~~~~~~~~----~~~~~~-~-~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a  253 (296)
T PRK15430        180 LIETMWLLPVAAIYLF----AIADSS-T-SHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLM  253 (296)
T ss_pred             HHHHHHHHHHHHHHHH----HHccCC-c-ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            2222233222222211    111110 0 000111112233444455544444445568999999999999999999999


Q ss_pred             HHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          249 SVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       249 ~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      +++|++++||++++.+++|+++++.|+.+...+
T Consensus       254 ~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        254 FLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998888776543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.92  E-value=6.4e-24  Score=177.19  Aligned_cols=271  Identities=14%  Similarity=0.171  Sum_probs=220.4

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcC----ccccCcccHH-HHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLG----VISTEPLTWR-LIKVWLPVNVIFVGMLITSMFSLKYINVA   78 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~   78 (290)
                      .+|+.-.  +|++|.+++..|+++-.++.....+..    .+++.+.+|. .+++..|.++..+++..++|.|++|++++
T Consensus        34 ~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlS  111 (349)
T KOG1443|consen   34 YFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLS  111 (349)
T ss_pred             Hhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeee
Confidence            4555444  689999999999988777665544321    1223456765 58889999999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 022936           79 MVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK  158 (290)
Q Consensus        79 ~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~  158 (290)
                      .|++.|++.++|+.+++.++.-||+++.-...+.++..|+.+.++.+.+++..|++++.+++++.+++..+.|+++++.+
T Consensus       112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~  191 (349)
T KOG1443|consen  112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQP  191 (349)
T ss_pred             eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence            99999999999999999998889999999999999999999999999999999999999999999999999999998533


Q ss_pred             hccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhh-----hc-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 022936          159 QVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-----SR-TPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT  232 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (290)
                          ..+-+|.++.++..-.....++|..+..|+....     ++ .+..........+...|..++...++.+..+.++
T Consensus       192 ----~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~T  267 (349)
T KOG1443|consen  192 ----SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRT  267 (349)
T ss_pred             ----cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeec
Confidence                1345788888776666666666766665543211     11 1111111223456778888899999989999999


Q ss_pred             CcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       233 ~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      +..+.++.+.+|.+.+.++|..+.+|+++..+|.|..+++.|+..+..
T Consensus       268 s~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  268 SSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             cceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999844

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=6.1e-22  Score=173.13  Aligned_cols=267  Identities=9%  Similarity=0.051  Sum_probs=195.7

Q ss_pred             hhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCc--cccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 022936            6 KFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGV--ISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL   83 (290)
Q Consensus         6 K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i   83 (290)
                      .++-++ +.+.|..=++.-.+.-.++.......++  ++..+.-++++.+.+.++++-...+++.+.|++|++++.++++
T Consensus        33 ~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL  111 (334)
T PF06027_consen   33 SLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLL  111 (334)
T ss_pred             HHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhh
Confidence            344443 6776777666665544433332222222  2222223456677788899999999999999999999999999


Q ss_pred             HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc---------ccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 022936           84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------SFHAVGYAWQIINCFLTASYSLTLRRVM  154 (290)
Q Consensus        84 ~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~~~~~  154 (290)
                      .+++.+++++++++++|||+++.++.|+.++++|+.++...|.         +....|+++++.++++||++++..|+..
T Consensus       112 ~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v  191 (334)
T PF06027_consen  112 DCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLV  191 (334)
T ss_pred             hhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999998876552         2246899999999999999999999987


Q ss_pred             hhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 022936          155 DTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGA  234 (290)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  234 (290)
                      +         +.+..+......+++.++..+..... |.....+.+ +. ...+...+.-+++-+..+...-..++..||
T Consensus       192 ~---------~~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~-w~-~~~~~~~v~~~~~lf~~y~l~p~~l~~ssA  259 (334)
T PF06027_consen  192 K---------KAPRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH-WT-SQVIGLLVGYALCLFLFYSLVPIVLRMSSA  259 (334)
T ss_pred             c---------cCCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC-CC-hhhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            6         34556666665666666666555443 444443332 22 222333333333333333333467999999


Q ss_pred             chhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          235 TTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       235 ~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      +...+-.....+.+++++++++|+++++..++|.+++++|.++|+..+.++
T Consensus       260 t~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  260 TFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             ceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            988887777899999999999999999999999999999999998754444

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.90  E-value=1.2e-21  Score=170.25  Aligned_cols=245  Identities=12%  Similarity=0.124  Sum_probs=168.1

Q ss_pred             HHHHHHHHHHHHHHHHHcC--ccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHH
Q 022936           21 MVYQNFISVVTVTILSFLG--VISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYL   98 (290)
Q Consensus        21 ~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~   98 (290)
                      ..++...+.+.+.+....+  +.+.++.+++.+......+......+.+.++++++.|++....+.++.|+++.++++++
T Consensus        31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~  110 (281)
T TIGR03340        31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT  110 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence            4666655555544433222  22233334444544455556677899999999999999999999999999999999999


Q ss_pred             hCccCChHHHHHHHHHHHhhhhheeccc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHH
Q 022936           99 FNKRHDNRVWAALFLMIISAISGGITDL-SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS  177 (290)
Q Consensus        99 ~~e~~~~~~~~~~~l~~~G~~l~~~~~~-~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (290)
                      +|||++++++.++.+++.|+.++..++. +.+..|+.+++.++++++.|.+..|+..++.+     ...+......+...
T Consensus       111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~  185 (281)
T TIGR03340       111 LGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-----AFYSALGYLGIGFL  185 (281)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh-----cccccHHHHHHHHH
Confidence            9999999999999999999998765432 23457889999999999999998887633110     01111111222222


Q ss_pred             hH-HHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHH-HHHHHhhcCcchhhhhhhhhhHHHHHHhHhh
Q 022936          178 LS-LPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSVAGILL  255 (290)
Q Consensus       178 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~  255 (290)
                      .. .|...+ ....++.. .   . ..+.. +...++.+.+.....|. .++++++.++.+.+...+++|++++++|+++
T Consensus       186 ~~~~~~~~~-~~~~~~~~-~---~-~~~~~-~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~  258 (281)
T TIGR03340       186 AMGWPFLLL-YLKRHGRS-M---F-PYARQ-ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF  258 (281)
T ss_pred             HHHHHHHHH-HHHHhccc-h---h-hhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH
Confidence            11 222211 11111110 0   0 01112 23344555555555554 4579999999999999999999999999999


Q ss_pred             ccCCCCchhHHHHHHHHhhhhh
Q 022936          256 FKVPTSLENSASIFFGLLAGVF  277 (290)
Q Consensus       256 ~~e~~~~~~~~G~~lil~g~~l  277 (290)
                      +||+++..+++|.++++.|+.+
T Consensus       259 lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       259 LNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.87  E-value=3.4e-21  Score=155.27  Aligned_cols=257  Identities=14%  Similarity=0.101  Sum_probs=211.8

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHH
Q 022936           13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA   92 (290)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~   92 (290)
                      .|.+...+.+.|+.+..+..-++...++  ..+.|+-.-+.....++-|.+.++.+|.|++++|.++..+-+++.|+-++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~--~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM  126 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIRK--KTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM  126 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeecc--cccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence            5788899999999999988766554443  23344444566677888899999999999999999999999999999999


Q ss_pred             HHHHHHhCccCChHHHHHHHHHHHhhhhheeccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCC
Q 022936           93 VGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN  165 (290)
Q Consensus        93 ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~  165 (290)
                      +++..+.+++.+|++.+++++++.|+++..+.+.       +..-.|.++.++|.-+.+.....+.|+.+.+       .
T Consensus       127 ilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-------q  199 (337)
T KOG1580|consen  127 ILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-------Q  199 (337)
T ss_pred             eeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-------c
Confidence            9999999999999999999999999999866421       2224799999999999999998888875432       2


Q ss_pred             CChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhh
Q 022936          166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~  245 (290)
                      -+..+++++.|+-+...+-...++.||.-....+. ..+|..|.-+...++++...+...+..+...||.+-|++.+-++
T Consensus       200 ~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRK  278 (337)
T KOG1580|consen  200 RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRK  278 (337)
T ss_pred             cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHH
Confidence            35678899999999888877777888753333222 22345566777888999888998899999999999999999999


Q ss_pred             HHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          246 IPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       246 v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      .++++.++++|+++++.+||+|.++++.+...=.
T Consensus       279 fFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  279 FFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999999999999876644

>TIGR00688 rarD rarD protein

Probab=99.86  E-value=1e-19  Score=156.19  Aligned_cols=228  Identities=11%  Similarity=0.115  Sum_probs=156.5

Q ss_pred             ehhhhhccCCChhHHHHHHHHHHHHHHHHHHH-HcCccc-----cCcccHHH-HHHHHHHHHHHHHHHHHhhhhhcccch
Q 022936            5 NKFVLSGYNFDAGISLMVYQNFISVVTVTILS-FLGVIS-----TEPLTWRL-IKVWLPVNVIFVGMLITSMFSLKYINV   77 (290)
Q Consensus         5 nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~-~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~~   77 (290)
                      .|+ ..  +++ |..+.++|++++.+++.+.. ..++++     .++.++++ +......+++....+.++++|++++++
T Consensus        21 ~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~   96 (256)
T TIGR00688        21 SKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSS   96 (256)
T ss_pred             HHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            465 33  588 99999999999887765433 222211     11122222 334556677788899999999999999


Q ss_pred             hHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022936           78 AMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTA  157 (290)
Q Consensus        78 ~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~  157 (290)
                      +.++++.++.|+++++++++++|||++++++.++.+++.|+.++..++.+.+    .+++.+++++|.|.+..||..++ 
T Consensus        97 ~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~-  171 (256)
T TIGR00688        97 LEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT-  171 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC-
Confidence            9999999999999999999999999999999999999999998754322211    46788999999999998886321 


Q ss_pred             hhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 022936          158 KQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTY  237 (290)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (290)
                               +..+... .+....|...+.... +++...   +.......|..+++.|+++...+...+.++|+.+|.+.
T Consensus       172 ---------~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~  237 (256)
T TIGR00688       172 ---------DLAGFCL-ETLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLL  237 (256)
T ss_pred             ---------CcchHHH-HHHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHH
Confidence                     1122221 122233333322221 122111   10111123666677777754434445689999999999


Q ss_pred             hhhhhhhhHHHHHHhHhh
Q 022936          238 SLVGSLNKIPLSVAGILL  255 (290)
Q Consensus       238 si~~~~~~v~~~i~~~~~  255 (290)
                      +...+++|++++++|++.
T Consensus       238 s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       238 GLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.86  E-value=1e-18  Score=152.04  Aligned_cols=247  Identities=15%  Similarity=0.188  Sum_probs=179.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHH
Q 022936           17 GISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEM   96 (290)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~   96 (290)
                      +......|...+.+........++.+.++..++.+...+...+.......+++.++++++++.++.+.++.|+++.++++
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            55666669988887743333222211122121222334444555778999999999999999999999999999999997


Q ss_pred             -HHhCccCChHHHHHHHHHHHhhhhheecccccc---hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHH
Q 022936           97 -YLFNKRHDNRVWAALFLMIISAISGGITDLSFH---AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV  172 (290)
Q Consensus        97 -~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~---~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~  172 (290)
                       +++|||++++++.++.+.+.|+.++..++...+   ..|+.+++.+++++|.+.+..|+..+          .++....
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~~----------~~~~~~~  185 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSR----------LGPVTLA  185 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CChHHHH
Confidence             667999999999999999999999987665433   58999999999999999999998741          2333434


Q ss_pred             H-HHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHH-HHHHHhhcCcchhhhhhhhhhHHHHH
Q 022936          173 L-LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSV  250 (290)
Q Consensus       173 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~si~~~~~~v~~~i  250 (290)
                      . +... ... .........+..    .  ......|....+.|+++....+. .++++++.++...+.....+|+.+.+
T Consensus       186 ~~~~~~-~~~-~~~~~~~~~~~~----~--~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  257 (292)
T COG0697         186 LLLQLL-LAL-LLLLLFFLSGFG----A--PILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAAL  257 (292)
T ss_pred             HHHHHH-HHH-HHHHHHHhcccc----c--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            3 3222 111 111111111111    1  11223356677777777765444 45799999999999999999999999


Q ss_pred             HhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          251 AGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       251 ~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      +++.++||+++..+++|+++++.|+.+.+..
T Consensus       258 ~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         258 LGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999998766

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.1e-19  Score=152.02  Aligned_cols=266  Identities=11%  Similarity=0.059  Sum_probs=217.5

Q ss_pred             hccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHH
Q 022936           10 SGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNV   89 (290)
Q Consensus        10 ~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi   89 (290)
                      ++.+|..|.++.+.|-+.+.++.+......+.+  .-.++-+.+....++.....-.++.-|++|++-++..+.|++..+
T Consensus        44 ~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmI  121 (327)
T KOG1581|consen   44 DGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMI  121 (327)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhh
Confidence            345788899999999999998887665444333  223345777888899999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc---------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           90 ITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        90 ~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      .++++..++.|+|.++++.....++..|+.+....+.         +++..|+.+...+.+.+++-+..++++.+     
T Consensus       122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~-----  196 (327)
T KOG1581|consen  122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFK-----  196 (327)
T ss_pred             HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhc-----
Confidence            9999999999999999999999999999998754321         24578999999999999999999999876     


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV  240 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~  240 (290)
                        +.+.++++++++.|++.++......+..+.+.+.-++-. .+|.++.-+.....++.+.+...+.-+++.||.+.+.+
T Consensus       197 --~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I  273 (327)
T KOG1581|consen  197 --KYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTI  273 (327)
T ss_pred             --cCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHH
Confidence              346899999999999999888766544444433322221 13455566666677777778777889999999999999


Q ss_pred             hhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       241 ~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      ...|.+++++++.++||++++..||.|+.+++.|..+-...|+|+
T Consensus       274 ~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  274 MTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            999999999999999999999999999999988888766554443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.81  E-value=8.1e-19  Score=144.39  Aligned_cols=267  Identities=16%  Similarity=0.087  Sum_probs=212.0

Q ss_pred             hhhhhccCCC-hhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH
Q 022936            6 KFVLSGYNFD-AGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK   84 (290)
Q Consensus         6 K~~~~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~   84 (290)
                      .+++++.+|. +.+.++..|+++=..+..+-...-..+.+.   .-+|....++.+..+.+.++|-|+.|.|.++..+.|
T Consensus        63 Elif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFK  139 (367)
T KOG1582|consen   63 ELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFK  139 (367)
T ss_pred             HHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhhHhhhhhccccCcCccccccCcHHHHHH
Confidence            4566666775 778999999876544332211110111111   236777888999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc----ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 022936           85 NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL----SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (290)
Q Consensus        85 ~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~  160 (290)
                      ++..+-+++.+.++-++|..+.+..+..+..+|.++....|.    .+|..|+.+.-.+.+++|+-...++|.++.++  
T Consensus       140 ccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~--  217 (367)
T KOG1582|consen  140 CCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP--  217 (367)
T ss_pred             hhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC--
Confidence            999999999999999999999999999999999999988775    35678999999999999999999999987533  


Q ss_pred             cccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhh
Q 022936          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV  240 (290)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~  240 (290)
                           .+..|+++|....+.+.++.....+||....|..-...+.....+..+-...+++........++..++.+++.+
T Consensus       218 -----~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatv  292 (367)
T KOG1582|consen  218 -----ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATV  292 (367)
T ss_pred             -----CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHH
Confidence                 356889999999999998888888888766655432222222334444445555555555567999999999999


Q ss_pred             hhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       241 ~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                      ++.++.+++++++++|..++|.+..-|..++..|+++-.+.|
T Consensus       293 TTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  293 TTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            999999999999999999999999999999999999977665

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.80  E-value=4.3e-17  Score=133.14  Aligned_cols=253  Identities=16%  Similarity=0.084  Sum_probs=195.2

Q ss_pred             hhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHh
Q 022936            6 KFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKN   85 (290)
Q Consensus         6 K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~   85 (290)
                      |-++.  .+. |--.+.+|..++.+++..+.+..   ++++++++++.....|.....+|.+++.|++.+|.+.+..+.+
T Consensus        32 k~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPw---r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF  105 (292)
T COG5006          32 KSLFP--LVG-AAGVTALRLAIAALILLALFRPW---RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF  105 (292)
T ss_pred             HHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHH---HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence            44454  556 88899999999988776654322   2577889999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc---cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 022936           86 VTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTK  162 (290)
Q Consensus        86 ~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~  162 (290)
                      +-|+.+.+++    .||..-..|.+  +.+.|..+..-..   .+.|..|..+++.+..|++.|.+.-||.=+       
T Consensus       106 ~GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~-------  172 (292)
T COG5006         106 TGPLAVALLS----SRRLRDFVWVA--LAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR-------  172 (292)
T ss_pred             ccHHHHHHHh----ccchhhHHHHH--HHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc-------
Confidence            9999887755    34444444555  5667877764322   245789999999999999999999998732       


Q ss_pred             cCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHhhcCcchhhhhh
Q 022936          163 SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSLVG  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~si~~  241 (290)
                        ..+.-.-+...+..+..+.+|+.....+       +...++.....-+..++++..+-|+. .-++++.++-+.++..
T Consensus       173 --~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll  243 (292)
T COG5006         173 --AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL  243 (292)
T ss_pred             --cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence              1233344556667777777776653322       22233455566678889998888865 6689999999999999


Q ss_pred             hhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          242 SLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       242 ~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      .+||..+.+.|+.++||++|+.||+|++.++.++.=.+...+|+.
T Consensus       244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            999999999999999999999999999999998876666554443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.79  E-value=6.9e-17  Score=140.81  Aligned_cols=232  Identities=14%  Similarity=0.149  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHHH-cCccccCccc-HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHh-hHHHHHHHHHHHHhC
Q 022936           24 QNFISVVTVTILSF-LGVISTEPLT-WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKN-VTNVITAVGEMYLFN  100 (290)
Q Consensus        24 r~~~~~~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~pi~~~ll~~~~~~  100 (290)
                      |..++.+++..... .+.   ++.+ ++.+..-+..++.+...+.++..|.++++++.+..+.+ +.|++..+++.+++|
T Consensus        33 ~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~  109 (290)
T TIGR00776        33 GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFG  109 (290)
T ss_pred             HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence            66666655443322 221   1122 33344445566668889999999999999999988888 888899999999999


Q ss_pred             ccCChHH----HHHHHHHHHhhhhheecccc-------cc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCh
Q 022936          101 KRHDNRV----WAALFLMIISAISGGITDLS-------FH-AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE  168 (290)
Q Consensus       101 e~~~~~~----~~~~~l~~~G~~l~~~~~~~-------~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~  168 (290)
                      ||+++++    +.++++.+.|+.+....+.+       .+ ..|.++++.|+++|+.|.+..|+.           +.++
T Consensus       110 e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-----------~~~~  178 (290)
T TIGR00776       110 EWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-----------GVDG  178 (290)
T ss_pred             hccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc-----------CCCc
Confidence            9999999    99999999999988654221       33 589999999999999999999875           2456


Q ss_pred             hHHHHHHHH----hHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHH-HHHh-hcCcchhhhhhh
Q 022936          169 FSMVLLNNS----LSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLH-QTGATTYSLVGS  242 (290)
Q Consensus       169 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~-~~~~~~~si~~~  242 (290)
                      .+..+.+..    .+.....+.   . +.      +...+...|.. +..|++. ...+..+ .+.+ +.++.+.++...
T Consensus       179 ~~~~~~~~~g~~~~~~~~~~~~---~-~~------~~~~~~~~~~~-~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~  246 (290)
T TIGR00776       179 LSVLLPQAIGMVIGGIIFNLGH---I-LA------KPLKKYAILLN-ILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQ  246 (290)
T ss_pred             ceehhHHHHHHHHHHHHHHHHH---h-cc------cchHHHHHHHH-HHHHHHH-HHHHHHHHHHcccccchhhHHHHHH
Confidence            665444433    222222221   0 00      11112223333 3377774 5655554 6888 999999999999


Q ss_pred             hhhHHHHHHhHhhccCCCCchhH----HHHHHHHhhhhhhhee
Q 022936          243 LNKIPLSVAGILLFKVPTSLENS----ASIFFGLLAGVFFARA  281 (290)
Q Consensus       243 ~~~v~~~i~~~~~~~e~~~~~~~----~G~~lil~g~~l~~~~  281 (290)
                      ++|+.+++.++++++|+.++.|+    +|.++++.|+.+....
T Consensus       247 ~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       247 LGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999    9999999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=3e-17  Score=138.84  Aligned_cols=212  Identities=16%  Similarity=0.249  Sum_probs=168.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc
Q 022936           47 TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL  126 (290)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~  126 (290)
                      ++++..++.+.+++|+.++.+.+.++++++++++++++++..++|++++++++|||.++++|.++.+.+.|+.+...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34667788899999999999999999999999999999999999999999999999999999999999999999854211


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHH
Q 022936          127 -----------------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIV  189 (290)
Q Consensus       127 -----------------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (290)
                                       .....|++..+.++++.++..++.+|.+|+       .+.+.+.....-...+.+..++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~-------~~~s~~~~N~qL~~~gi~~~~~~~~~  165 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKR-------SNVSLWIQNMQLYLFGILFNLLALLL  165 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcc-------cchhHHHHHHHHHHHHHHHHHHHHhc
Confidence                             112579999999999999999999999974       23455554444455666665554333


Q ss_pred             hcchhhhhcCCC--CcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHH
Q 022936          190 FNEVDYLSRTPL--LRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSAS  267 (290)
Q Consensus       190 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G  267 (290)
                       .|+....+.+.  ..++..|..+...++.|...++    .+|+.+...-.....+..+.+.++++.+||.++|....+|
T Consensus       166 -~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  166 -SDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             -ccccccccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence             33332222111  2234456677777777777776    8999999999999999999999999999999999999998


Q ss_pred             HHH
Q 022936          268 IFF  270 (290)
Q Consensus       268 ~~l  270 (290)
                      ..+
T Consensus       241 ~~~  243 (244)
T PF04142_consen  241 AAL  243 (244)
T ss_pred             eec
Confidence            765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.1e-18  Score=144.07  Aligned_cols=253  Identities=17%  Similarity=0.219  Sum_probs=190.6

Q ss_pred             hHHHHHHHHHHHHHHHHHH-HHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcc-cchhHHHHHHhhHHHHHHHH
Q 022936           17 GISLMVYQNFISVVTVTIL-SFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKY-INVAMVTVLKNVTNVITAVG   94 (290)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~i~~~~pi~~~ll   94 (290)
                      -..+++.|++...+-..+. ..+...+ ++++   +|.....-.++...+.++|+++++ ++.+...+.|+-.++.++++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            4577888887655543332 1222222 3444   344455567788899999999998 89999999999999999999


Q ss_pred             HHHHhCccCChHHHHHHHHHHHhhhhheec---ccc--------------c-c-hhhHHHHHHHHHHHHHHHHHHHHHhh
Q 022936           95 EMYLFNKRHDNRVWAALFLMIISAISGGIT---DLS--------------F-H-AVGYAWQIINCFLTASYSLTLRRVMD  155 (290)
Q Consensus        95 ~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~---~~~--------------~-~-~~G~~~~l~s~~~~a~~~v~~~~~~~  155 (290)
                      ++++.|+|.+.+++.+++++.+|+++.+..   |..              + . ..|+.+...+.+..|.-.+++++..+
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~  188 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ  188 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999988542   110              1 1 36889899999999999999999887


Q ss_pred             hhhhccccCCCChhHHHHHHHHhHHHHHHHHHH-HhcchhhhhcCC-----C--CcchhHHHHHHHHHHHHHHHHHHHHH
Q 022936          156 TAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVI-VFNEVDYLSRTP-----L--LRLPSFWLVMTLSGFLGLAISFTSMW  227 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (290)
                      +++       =++-|.+||+...++|..+...- +..+|...+..+     .  ..-|..|.+++..+...+.--=..+.
T Consensus       189 kyG-------Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~  261 (330)
T KOG1583|consen  189 KYG-------KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYI  261 (330)
T ss_pred             Hhc-------CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhh
Confidence            543       26789999999999887765321 112232222221     1  11356677777766665443333445


Q ss_pred             HHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          228 FLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       228 ~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      .-..+++.+.+++-++++-++.++++..|++++|+++|+|..+++.|.++|+.
T Consensus       262 L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  262 LTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             hhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            56678999999999999999999999999999999999999999999999974

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.78  E-value=1.7e-17  Score=142.50  Aligned_cols=224  Identities=17%  Similarity=0.105  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc----
Q 022936           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL----  126 (290)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~----  126 (290)
                      .+.-+..+.+....++.+|.|+++++++..+++.++.-.||..++.++.+||+++.|.+++++.+.|+++++.+|.    
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~  238 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS  238 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence            3444566677789999999999999999999999999999999999999999999999999999999999987743    


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHH----HHHHHhcchhhhhc
Q 022936          127 ----SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGV----LLVIVFNEVDYLSR  198 (290)
Q Consensus       127 ----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  198 (290)
                          +....|.++++++++.||.|.+..||..+++     +.+++.-...-|.-++...++.    ++-..-+|.   .+
T Consensus       239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e-----g~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~---F~  310 (416)
T KOG2765|consen  239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE-----GERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER---FE  310 (416)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc---cc
Confidence                2336899999999999999999999986531     1345533333333333333333    332221121   12


Q ss_pred             CCCCcchhHHHHHHHHHHHH-HHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhh
Q 022936          199 TPLLRLPSFWLVMTLSGFLG-LAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVF  277 (290)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l  277 (290)
                      .|  ....+ ..++..+..+ ++--|...+++-.++|+..++...+..+++++...++=+.++++..++|...+++|.+.
T Consensus       311 lP--~~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~  387 (416)
T KOG2765|consen  311 LP--SSTQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVI  387 (416)
T ss_pred             CC--CCcee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhh
Confidence            22  22232 2334444444 45567666899999999999999999999999999888999999999999999999999


Q ss_pred             hheeeccc
Q 022936          278 FARAKMWE  285 (290)
Q Consensus       278 ~~~~~~~~  285 (290)
                      .++..+.+
T Consensus       388 vn~~~~~~  395 (416)
T KOG2765|consen  388 VNISSENS  395 (416)
T ss_pred             eecccccc
Confidence            88754433

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.77  E-value=1.5e-17  Score=131.51  Aligned_cols=147  Identities=18%  Similarity=0.396  Sum_probs=126.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCC-----CCc-ch
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTP-----LLR-LP  205 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~  205 (290)
                      |+++++.|.++.|+++++.|+.+++..  .++++.+++++++|++..+.+.+.|.....|+........     ... ++
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~   78 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDP   78 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchH
Confidence            789999999999999999999987421  1235789999999999999999999988877654222111     111 34


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          206 SFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      ..+..++.+|++++..+++.++.++++||.++++.+++|.+..++.|+++|||++|..+++|+++.+.|+.+|+|
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            667788999999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.76  E-value=8e-16  Score=132.40  Aligned_cols=226  Identities=15%  Similarity=0.187  Sum_probs=180.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc--
Q 022936           48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD--  125 (290)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~--  125 (290)
                      +++..+....+++|..+|.+...++++.+++++++..++....|+++..++++||.++++|.++++...|+.+.-.++  
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            445667788899999999899999999999999999999999999999999999999999999999999999985211  


Q ss_pred             ---------cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhh
Q 022936          126 ---------LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL  196 (290)
Q Consensus       126 ---------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (290)
                               .+..+.|....+.++...++..++.+|++|+       .+.+.|-...--..++.++.+...... |+...
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~-------s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i  240 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG-------SNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAI  240 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHHHHHhhc-ccccc
Confidence                     1234789999999999999999999999973       344555444333445555555444333 33222


Q ss_pred             hcCC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhh
Q 022936          197 SRTP--LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLA  274 (290)
Q Consensus       197 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g  274 (290)
                      ...+  ..++...|..++..++.|...+.    .+|+.+...-.....+..+++.+.++.+||-++|..-.+|+.+++.+
T Consensus       241 ~~~gff~G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S  316 (345)
T KOG2234|consen  241 NEYGFFYGYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS  316 (345)
T ss_pred             ccCCccccccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence            1111  12345668888888888887776    78888888888888888999999999999999999999999999999


Q ss_pred             hhhhheeeccc
Q 022936          275 GVFFARAKMWE  285 (290)
Q Consensus       275 ~~l~~~~~~~~  285 (290)
                      +.+|+..+.++
T Consensus       317 i~lY~~~P~~~  327 (345)
T KOG2234|consen  317 IFLYSLYPARD  327 (345)
T ss_pred             HHHhhcCCccc
Confidence            99999766654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.76  E-value=8.5e-16  Score=128.77  Aligned_cols=257  Identities=12%  Similarity=0.160  Sum_probs=191.0

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHH-cCcc-ccCcc--cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHH
Q 022936           13 NFDAGISLMVYQNFISVVTVTILSF-LGVI-STEPL--TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTN   88 (290)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p   88 (290)
                      +.| +..+...|.+.+...+..+.. .|+. +..+.  +++.+......+++...+...+.+|...-.+-.++.=.+.+|
T Consensus        31 ~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InP  109 (293)
T COG2962          31 PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINP  109 (293)
T ss_pred             cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHH
Confidence            677 899999999999877665543 2221 11121  123344445556667889999999999877778888889999


Q ss_pred             HHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCh
Q 022936           89 VITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE  168 (290)
Q Consensus        89 i~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~  168 (290)
                      ++.++++.+++|||.++.++.++.+..+|+..-.....+.++....+    ++++++|...-|++           +.+.
T Consensus       110 L~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK~~-----------~v~a  174 (293)
T COG2962         110 LVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRKKL-----------KVDA  174 (293)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHHhc-----------CCch
Confidence            99999999999999999999999999999999887777888776555    46788888764444           3455


Q ss_pred             hHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHH
Q 022936          169 FSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPL  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~  248 (290)
                      .+-...-+..-.|..+.+....++.....   ...++..+..++..|..+-+--.....+.|+.+=.+.++..+++|...
T Consensus       175 ~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~  251 (293)
T COG2962         175 LTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLM  251 (293)
T ss_pred             HHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            55555566666777766665554433211   111234466777777776433223336899999999999999999999


Q ss_pred             HHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccccC
Q 022936          249 SVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWERSQ  288 (290)
Q Consensus       249 ~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~~~  288 (290)
                      .+++++++||+++..++..-+.+-.|..+|.++..+++|+
T Consensus       252 fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~  291 (293)
T COG2962         252 FLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK  291 (293)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999876655444

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.70  E-value=3.5e-18  Score=140.42  Aligned_cols=249  Identities=12%  Similarity=0.066  Sum_probs=182.7

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHH-HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHH
Q 022936           14 FDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLI-KVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA   92 (290)
Q Consensus        14 ~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~   92 (290)
                      ++ |....-.|++.-.+..+++....+...  +-.+.. +.+++-++......+..+||++|.+.+.+.++..++|++|.
T Consensus        62 ~~-p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~  138 (346)
T KOG4510|consen   62 ND-PMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTI  138 (346)
T ss_pred             cC-hhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHH
Confidence            45 777777776665555555432221111  111111 22345577777788889999999999999999999999999


Q ss_pred             HHHHHHhCccCChHHHHHHHHHHHhhhhheec-----c------c---ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 022936           93 VGEMYLFNKRHDNRVWAALFLMIISAISGGIT-----D------L---SFHAVGYAWQIINCFLTASYSLTLRRVMDTAK  158 (290)
Q Consensus        93 ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~-----~------~---~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~  158 (290)
                      +++|.++||++++.+.++..+.+.|++++..+     |      .   +.+..|-+.++.+++..|--.+..|++=+   
T Consensus       139 ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk---  215 (346)
T KOG4510|consen  139 IFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK---  215 (346)
T ss_pred             HHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc---
Confidence            99999999999999999999999999998542     1      1   23457888888888888877787888732   


Q ss_pred             hccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh
Q 022936          159 QVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPL-LRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTY  237 (290)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (290)
                            +.+..-.+-|-...++...++.....+++.    .|+ +.+   |..++..|+.++..+.....++++-.|...
T Consensus       216 ------~~h~~msvsyf~~i~lV~s~I~~~~ig~~~----lP~cgkd---r~l~~~lGvfgfigQIllTm~lQiErAGpv  282 (346)
T KOG4510|consen  216 ------NAHAIMSVSYFSLITLVVSLIGCASIGAVQ----LPHCGKD---RWLFVNLGVFGFIGQILLTMGLQIERAGPV  282 (346)
T ss_pred             ------cccEEEEehHHHHHHHHHHHHHHhhcccee----cCccccc---eEEEEEehhhhhHHHHHHHHHhhhhccCCe
Confidence                  334333333444555555555444445432    232 112   445677899999999988889999999999


Q ss_pred             hhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          238 SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       238 si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      ++..+...+++.++-+++|||.+|+++|.|.++++.+.++....
T Consensus       283 aim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  283 AIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK  326 (346)
T ss_pred             ehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence            99999999999999999999999999999999998877765543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.51  E-value=1.4e-12  Score=108.31  Aligned_cols=219  Identities=16%  Similarity=0.179  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc-----
Q 022936           52 KVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-----  126 (290)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~-----  126 (290)
                      +.+++.+++=.....+.+.++.+++++.+|++|....+||.+++.-+++++++.++|+++....+|+..++..|.     
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            446778888777788888999999999999999999999999999999999999999999999999999876543     


Q ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHH-----hc-----
Q 022936          127 -----SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIV-----FN-----  191 (290)
Q Consensus       127 -----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----  191 (290)
                           +.-..|+.+.+++-+..|.+.++-+|.++.       .+.+|.+.+-|.-+++...+..+...     .+     
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~-------~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~  239 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKK-------SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC  239 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhh-------ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence                 122579999999999999999999998763       35788887777766664433222221     11     


Q ss_pred             -------chhhhhcCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCc
Q 022936          192 -------EVDYLSRTPLLRLPSFWLVMTLSGFLGLA--ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSL  262 (290)
Q Consensus       192 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~  262 (290)
                             ||.+.+..- ...|.  ..+...|....+  .|+.....-|..|+++-.+...++..+.-+++.....|.+..
T Consensus       240 ~~~g~~eD~~~~~~~~-~e~p~--l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~l  316 (372)
T KOG3912|consen  240 NPRGVLEDWGDAFAAL-QESPS--LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHL  316 (372)
T ss_pred             CCCcchhhHHHHHHHh-cCCch--hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHH
Confidence                   111111100 00111  122223332221  233434456778999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhhhhhhhe
Q 022936          263 ENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       263 ~~~~G~~lil~g~~l~~~  280 (290)
                      .|+.|.++.+.|+++|+-
T Consensus       317 lqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  317 LQILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999973

>TIGR00803 nst UDP-galactose transporter

Probab=99.42  E-value=2.3e-12  Score=108.17  Aligned_cols=188  Identities=19%  Similarity=0.202  Sum_probs=130.3

Q ss_pred             cchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc---------------------------c
Q 022936           75 INVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------------------------S  127 (290)
Q Consensus        75 ~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~---------------------------~  127 (290)
                      +++|.....++..|+++++.++...+||.+..++.+.++...|+......|.                           +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5788889999999999999999999999999999999999999875322111                           1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcc----hhhhhcCC--C
Q 022936          128 FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNE----VDYLSRTP--L  201 (290)
Q Consensus       128 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~  201 (290)
                      ..+.|....+.+..+.++-.++.++..++       ++.     .+|.+....++..+.....++    .......+  .
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~-------~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKD-------GDT-----MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI  149 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccC-------CCC-----chHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence            23456666777778888888888887542       122     244444444433332211111    11111111  1


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhh
Q 022936          202 LRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFF  278 (290)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~  278 (290)
                      ..+...|...+..++.+.+    ..+.+|+.++++.++....+++++.++++++|||+++..+++|+.+++.|+.+|
T Consensus       150 ~~~~~~~~~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       150 GYPTAVWIVGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             CCchHHHHHHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1223334444444443333    445899999999999999999999999999999999999999999999998775

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.41  E-value=1.5e-12  Score=102.89  Aligned_cols=221  Identities=14%  Similarity=0.140  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccc--c
Q 022936           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS--F  128 (290)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~--~  128 (290)
                      .++..|.+++..+.++.+..+++.++++.++.+..+.-.|+.+++++++|+|+...++.+.++.+.|+++..+.|-.  .
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            45567888999999999999999999999999999999999999999999999999999999999999999877643  4


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCh----hH-HHHHHH-HhHHHHHHHHHHHhcchhhhhcCCCC
Q 022936          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE----FS-MVLLNN-SLSLPLGVLLVIVFNEVDYLSRTPLL  202 (290)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (290)
                      ++.|+..++.|+...|+|.+..|+...+.       +++.    .+ +-|++- ....|.......-.+.|+.....|  
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnA-------n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~P--  203 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNA-------NFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAP--  203 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccC-------cchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCC--
Confidence            68999999999999999999999987532       1211    11 122221 122222222111122333222222  


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          203 RLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                           |..+.-.+.+....++..+.++..+.|...|+-..........+..++-+-..+-....|..+++.|.++.-...
T Consensus       204 -----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  204 -----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             -----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence                 555555555556667777789999999999998888878888887776666788999999999999988876554


Q ss_pred             ccc
Q 022936          283 MWE  285 (290)
Q Consensus       283 ~~~  285 (290)
                      .|+
T Consensus       279 d~~  281 (290)
T KOG4314|consen  279 DKD  281 (290)
T ss_pred             chh
Confidence            444

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.32  E-value=1.4e-11  Score=93.45  Aligned_cols=116  Identities=21%  Similarity=0.310  Sum_probs=96.9

Q ss_pred             eeehhhhhccCCChhHHHHHHHHHHHHHHHHHHH-HcCccccCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHH
Q 022936            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILS-FLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMV   80 (290)
Q Consensus         3 ~~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~   80 (290)
                      +.+|...+  ++| |....++|+..+.+ +..+. ..++.+.++.+++++......+.+ ......+.++++++++++..
T Consensus         8 ~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    8 VFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            35677777  588 99999999999987 44333 233333456677777777777777 58899999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhe
Q 022936           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (290)
Q Consensus        81 ~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~  122 (290)
                      +++.++.|+++.+++++++||+++++++.++++++.|+.++.
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.22  E-value=2.4e-10  Score=84.23  Aligned_cols=135  Identities=12%  Similarity=0.166  Sum_probs=106.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      -.+|++++++++++-.++.|--++         +.||..-++.-+.....++....+..|.+....+.    ++..|..+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~---------~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~----~~k~~lfl   70 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE---------GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI----GPKSWLFL   70 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc---------ccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc----Ccceehhh
Confidence            367899999999999999887665         34555545555666666666666677766533222    23347788


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      +.+|+.+-.-.+..|++++.-.+....-..-..+++++++++.+++|++|..+++|++++..|.++.+
T Consensus        71 ilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          71 ILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            88998776666666789999999999999999999999999999999999999999999999988764

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.16  E-value=9.4e-12  Score=102.20  Aligned_cols=256  Identities=10%  Similarity=0.053  Sum_probs=176.3

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL   83 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i   83 (290)
                      .+.++-++ +.+-|..=++.....-.++-.+...+|+    +.-+-.|++.+++++.=.-.+++-..|.||++....+.+
T Consensus        36 tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL  110 (336)
T KOG2766|consen   36 TSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL  110 (336)
T ss_pred             hhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence            34454442 4555666555555444444333333443    111224566777777767778888899999999999999


Q ss_pred             HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheeccc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 022936           84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMD  155 (290)
Q Consensus        84 ~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~  155 (290)
                      -+-..+.+.+++|+++|.|..+.++.++++++.|+..+...|.        +....|+++.++++-+||+.++.-+.+.+
T Consensus       111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk  190 (336)
T KOG2766|consen  111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK  190 (336)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence            9988889999999999999999999999999999998876553        33468999999999999999998888766


Q ss_pred             hhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHH-HHHhhcCc
Q 022936          156 TAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGA  234 (290)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~  234 (290)
                               +.+..+.+-...++++++..+-.. . |..+....  +++......  +...++..+-|... -.+|.+|+
T Consensus       191 ---------n~d~~elm~~lgLfGaIIsaIQ~i-~-~~~~~~tl--~w~~~i~~y--l~f~L~MFllYsl~pil~k~~~a  255 (336)
T KOG2766|consen  191 ---------NADRVELMGFLGLFGAIISAIQFI-F-ERHHVSTL--HWDSAIFLY--LRFALTMFLLYSLAPILIKTNSA  255 (336)
T ss_pred             ---------cCcHHHHHHHHHHHHHHHHHHHHh-h-hccceeeE--eehHHHHHH--HHHHHHHHHHHHhhHHheecCCc
Confidence                     567777777767777777665532 2 22111111  111111111  11333333344433 46888888


Q ss_pred             chhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          235 TTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       235 ~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      +...+--.-...-+.++  -.||-+.+|.-.+..+.+..|.++|+.+
T Consensus       256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            87776555556666666  5678889999999999999999999653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.16  E-value=3.1e-10  Score=84.88  Aligned_cols=105  Identities=19%  Similarity=0.339  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHcC-cc-c-cCcccHHHHHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHH
Q 022936           22 VYQNFISVVTVTILSFLG-VI-S-TEPLTWRLIKVWLPVNVIFV-GMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY   97 (290)
Q Consensus        22 ~~r~~~~~~~l~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~   97 (290)
                      .+|...+.+++......+ +. + .+..+++.+......+.+.. .++.++.+|+++.+ +....+.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            467777776665543322 11 1 12233344555556576654 88999999999999 58889999999999999999


Q ss_pred             HhCccCChHHHHHHHHHHHhhhhheecccc
Q 022936           98 LFNKRHDNRVWAALFLMIISAISGGITDLS  127 (290)
Q Consensus        98 ~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~  127 (290)
                      ++|||++++++.++.++..|++++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999887654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.13  E-value=4.5e-10  Score=85.07  Aligned_cols=124  Identities=19%  Similarity=0.308  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHH
Q 022936          141 FLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLA  220 (290)
Q Consensus       141 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (290)
                      +++|.+.++.|+..+         +.++....++....+.+ ..+.....+..+    .+.. +...+....+.++++..
T Consensus         1 ~~~a~~~~~~k~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~   65 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK---------KISPLSITFWRFLIAGI-LLILLLILGRKP----FKNL-SPRQWLWLLFLGLLGTA   65 (126)
T ss_pred             ceeeeHHHHHHHHhc---------cCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCC-ChhhhhhhhHhhcccee
Confidence            357788899999876         47888989998888887 555554443322    1111 12224445556666544


Q ss_pred             H-HHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          221 I-SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       221 ~-~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      . +...+++.++.++...+.....+|+.+.++++++++|++++.+++|+++++.|+.+..
T Consensus        66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4 4445679999999999999999999999999999999999999999999999988754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.04  E-value=1.1e-07  Score=80.59  Aligned_cols=214  Identities=15%  Similarity=0.131  Sum_probs=154.1

Q ss_pred             CcccH--HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hhHHHHHHHHHHHHhCccCChHHH----HHHHHHHH
Q 022936           44 EPLTW--RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVW----AALFLMII  116 (290)
Q Consensus        44 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~~~~~e~~~~~~~----~~~~l~~~  116 (290)
                      ++++.  +.+..-+..++++...+...+.|.+++.+|.+.-+. ...-+.+.+++.++++|-.+..++    .++++++.
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liii  115 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIII  115 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHH
Confidence            45543  566666788899999999999999999887765544 667777899999999997665554    47889999


Q ss_pred             hhhhheeccccc--------chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHH
Q 022936          117 SAISGGITDLSF--------HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVI  188 (290)
Q Consensus       117 G~~l~~~~~~~~--------~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (290)
                      |+.+.+..|.+.        ...|....+.+.+.|..|.+..|..           +.++++..+=+++........+..
T Consensus       116 Gv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~-----------~~~~~~~~lPqaiGm~i~a~i~~~  184 (269)
T PF06800_consen  116 GVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF-----------HVSGWSAFLPQAIGMLIGAFIFNL  184 (269)
T ss_pred             HHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------CCChhHhHHHHHHHHHHHHHHHhh
Confidence            999987754321        2469999999999999999987764           457777666655544443333333


Q ss_pred             HhcchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchh----
Q 022936          189 VFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLEN----  264 (290)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~----  264 (290)
                      ..++  ...      +...|. -+..|++--..|...+.+.++.+..+.=.++.+..+++.+.|+++++|+-+.++    
T Consensus       185 ~~~~--~~~------~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~  255 (269)
T PF06800_consen  185 FSKK--PFF------EKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT  255 (269)
T ss_pred             cccc--ccc------ccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence            2211  111      111122 244566655666666678889999999999999999999999999999988664    


Q ss_pred             HHHHHHHHhhhhh
Q 022936          265 SASIFFGLLAGVF  277 (290)
Q Consensus       265 ~~G~~lil~g~~l  277 (290)
                      .+|+++++.|.++
T Consensus       256 ~~G~~Liv~G~il  268 (269)
T PF06800_consen  256 LIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHhhhc
Confidence            4577777777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.99  E-value=2.2e-09  Score=79.20  Aligned_cols=115  Identities=14%  Similarity=0.120  Sum_probs=97.9

Q ss_pred             ehhhhhccCCChhHHHHHHHHHHHHHHHHHHH-HcCcccc-CcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHH
Q 022936            5 NKFVLSGYNFDAGISLMVYQNFISVVTVTILS-FLGVIST-EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTV   82 (290)
Q Consensus         5 nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~   82 (290)
                      .|.-++  +.+ |.+-+..|..+..+.+.... ..|+.+. ..++.|.+..+...|+.......++++|++.-++|...-
T Consensus        22 ~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvP   98 (140)
T COG2510          22 AKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVP   98 (140)
T ss_pred             HHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEE
Confidence            466666  788 99999999998887766543 4454443 346778888877888888899999999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhe
Q 022936           83 LKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (290)
Q Consensus        83 i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~  122 (290)
                      +..+.|+++.+++++++|||++..+|+++.++.+|+.+++
T Consensus        99 ldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          99 LDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             cccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999998865

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.89  E-value=4.4e-08  Score=85.19  Aligned_cols=133  Identities=10%  Similarity=0.062  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHH
Q 022936          133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT  212 (290)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (290)
                      +++.+.+++++|.+.+..||..++         .++  .+++.+....+...|+....... ..++.+   +...|....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~---------~~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~---~~~~~~~~~   67 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK---------EPD--FLWWALLAHSVLLTPYGLWYLAQ-VGWSRL---PATFWLLLA   67 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc---------hhH--HHHHHHHHHHHHHHHHHHHhccc-CCCCCc---chhhHHHHH
Confidence            567899999999999999987542         122  24555555555555554432111 111111   112244455


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      ..+.......+..+++.++.++...+.+....|+.+.++++++++|+++..+++|+++++.|+.+...
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            56666666666667899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.87  E-value=1e-07  Score=83.56  Aligned_cols=142  Identities=11%  Similarity=0.089  Sum_probs=103.7

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcch
Q 022936          126 LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLP  205 (290)
Q Consensus       126 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (290)
                      .+....|.++.++++++++...++.|.. +         +.++.+..++....+.+.+.+.....++.....+.  ..+.
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~---------~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~   70 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y---------YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTP   70 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c---------CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCH
Confidence            3344589999999999999999999764 3         47899999999988887666655443332211100  0111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          206 SFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      ..+......+.+........+++++++++...++.....|+...++++++++|+++..+++|+++.++|+.+..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         71 QKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            22222233333333334455689999999999999999999999999999999999999999999999998754

>TIGR00688 rarD rarD protein

Probab=98.83  E-value=1.5e-07  Score=80.77  Aligned_cols=139  Identities=17%  Similarity=0.155  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhh-hcCCCCcchhHHH
Q 022936          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWL  209 (290)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  209 (290)
                      .|..+.+.++++++...+..|.. .         +.++.+..++-...+.+.+.+.....++.... .+.+.......+.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~---------~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K---------PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLIL   71 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c---------cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHH
Confidence            48899999999999999998873 3         47899999999888887766554433332111 0111111111133


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      .....|++........+.+++++++.++++.....|+.+++++.++++|+++.++++|+++.+.|+.+..
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            4455565544445555679999999999999999999999999999999999999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.72  E-value=2.5e-07  Score=79.33  Aligned_cols=113  Identities=6%  Similarity=-0.008  Sum_probs=85.6

Q ss_pred             eehhhhhccCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHHHH
Q 022936            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTV   82 (290)
Q Consensus         4 ~nK~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~   82 (290)
                      ..|...++.+.+ +.....+|+.++.+++.+....... .++.+++++...+..+++ ......++++++++.+++.+++
T Consensus       146 ~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       146 LYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-NPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             HHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence            456655532222 4455557888888777665443322 223355666666666665 4678899999999999999999


Q ss_pred             HHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhh
Q 022936           83 LKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISA  118 (290)
Q Consensus        83 i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~  118 (290)
                      +.++.|+++++++++++||++++.++.+..+++.|+
T Consensus       224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999886

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.55  E-value=1.7e-06  Score=75.67  Aligned_cols=219  Identities=11%  Similarity=0.064  Sum_probs=124.1

Q ss_pred             HHHHH-HHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccc----cc
Q 022936           55 LPVNV-IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS----FH  129 (290)
Q Consensus        55 ~~~~~-~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~----~~  129 (290)
                      ...|+ .+..+..++..|+.+.|.+..+-+.+..-++..+++..++|||++++.+.+..+++.|..++....++    .+
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t  132 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHT  132 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCC
Confidence            34443 46678889999999999999999999999999999999999999999999999999999876432111    11


Q ss_pred             ---------hhh---HHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHH---HHhHHHHHHHHHHHhcchh
Q 022936          130 ---------AVG---YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLN---NSLSLPLGVLLVIVFNEVD  194 (290)
Q Consensus       130 ---------~~G---~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  194 (290)
                               ..+   +...... +...+.....+|.-+          -+.   ..|.   +..+..-.+..-.......
T Consensus       133 ~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~----------~~i---~vyi~i~sl~Gs~tvl~~K~i~~~i~  198 (300)
T PF05653_consen  133 LDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGR----------RNI---LVYISICSLIGSFTVLSAKAISILIK  198 (300)
T ss_pred             HHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhcc----------cce---EEEEEEeccccchhhhHHHHHHHHHH
Confidence                     012   1111111 111111111111100          011   1111   1111110000000000000


Q ss_pred             hhh-cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhh-hhHHHHHHhHhhccCC--CCchh----HH
Q 022936          195 YLS-RTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSL-NKIPLSVAGILLFKVP--TSLEN----SA  266 (290)
Q Consensus       195 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~-~~v~~~i~~~~~~~e~--~~~~~----~~  266 (290)
                      ... ..+...++..|..++...++....-+..++++++.+++...-+.++ =...+++-|.++|+|.  .++.+    ..
T Consensus       199 ~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~  278 (300)
T PF05653_consen  199 LTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLC  278 (300)
T ss_pred             HHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence            000 1112234555666555555555555566789998877655444433 3456777788888864  55544    45


Q ss_pred             HHHHHHhhhhhhheeeccccc
Q 022936          267 SIFFGLLAGVFFARAKMWERS  287 (290)
Q Consensus       267 G~~lil~g~~l~~~~~~~~~~  287 (290)
                      |..+++.|+++.+..|.+|..
T Consensus       279 G~~~ii~GV~lL~~~~~~~~~  299 (300)
T PF05653_consen  279 GFLIIIIGVFLLSSSKDKEIS  299 (300)
T ss_pred             HHHHHHHhhheeeccCchhcc
Confidence            677788888888766665543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.54  E-value=2.1e-06  Score=77.02  Aligned_cols=136  Identities=16%  Similarity=0.145  Sum_probs=102.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      =+...+..-++|+.+.++.|..++.        .+++....++=...+.+.++++....+...   ..+.. +...|..+
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~~--------G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~-~~~~~~~l   81 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATSK--------GLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPL-SVSILSKI   81 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcc-hHHHHHHH
Confidence            4556677888999999999998863        678888888888888877777665432110   11111 11124455


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhh------ccCCCCchhHHHHHHHHhhhhhhh
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILL------FKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~------~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      ...|++++..+...+.++++++|+.++++.+..|+.+.++++++      ++|+++..+++|+++.+.|+.+..
T Consensus        82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            56777774444455679999999999999999999999999999      699999999999999999988754

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.44  E-value=2.6e-06  Score=63.20  Aligned_cols=64  Identities=13%  Similarity=0.225  Sum_probs=59.7

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhe
Q 022936           59 VIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (290)
Q Consensus        59 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~  122 (290)
                      .++....++..++++.+|++.+..+-++.|+++.+++++++|||++++++.++.+++.|+.++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3467789999999999999999999999999999999999999999999999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.42  E-value=1.1e-05  Score=61.49  Aligned_cols=123  Identities=21%  Similarity=0.187  Sum_probs=83.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHH
Q 022936          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (290)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (290)
                      .|+++.+.+.++.+..+++.|+-+++.+      +.+...   . ..     .... ...             +|   ..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g------~~~~~~---~-~~-----~~~~-~~~-------------~p---~~   49 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP------LLSHAW---D-FI-----AALL-AFG-------------LA---LR   49 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC------Cccchh---H-HH-----HHHH-HHh-------------cc---HH
Confidence            4789999999999999999998765311      111100   0 00     0000 000             11   11


Q ss_pred             HHHHHHHHHHHHHHHH-HHHhhcCcchhhhhhhhhhHHHHHHhHh--hccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          211 MTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGIL--LFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       211 ~~~~~~~~~~~~~~~~-~~i~~~~~~~~si~~~~~~v~~~i~~~~--~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      .++.|+.++..++..| .++++.+...+.-.....++...+.++.  +|||++|+.+++|++++++|+++.+..++|+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~  127 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKA  127 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCC
Confidence            2455666666666554 6899999998888777777777777774  7999999999999999999999988655543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.37  E-value=9.8e-06  Score=68.73  Aligned_cols=139  Identities=16%  Similarity=0.203  Sum_probs=109.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHH
Q 022936          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (290)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (290)
                      +..|++.++.+.+.++..-.+.|-+.          ..++.|+..+--+.+.|+.+........+.+.++  ..++|.-+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~----------~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~   72 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE----------PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTL   72 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHH
Confidence            34799999999999999999888874          3578888888888888887776666666665554  23344445


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          209 LVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      ......+.. ...|...| |++.+-....+|.--.++|.+.+++|.++++|+++..|++.+++..+|+..-.+
T Consensus        73 ~~~~l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          73 LMLALTALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            555555544 34455554 789998999999999999999999999999999999999999999999887654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.33  E-value=2.8e-05  Score=69.76  Aligned_cols=138  Identities=12%  Similarity=0.047  Sum_probs=100.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCC-hhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHH
Q 022936          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLN-EFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (290)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (290)
                      +.-..+.+..-.+...++++.|..++         +.+ |+.+..++...+...+.++.. .+ .....+.+  .....|
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~---------~~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~--~~~~~~  114 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALN---------MLPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIK--SLKLFL  114 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---------hCChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCC--CHHHHH
Confidence            33444455555555667888888876         356 899888888877665544332 11 11111111  012345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      ..++..|+++.......+.+.+.++++.++++-..+|+++++++.++++|+++..+++|+++++.|+.+...
T Consensus       115 ~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        115 KNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            567778888877666666889999999999999999999999999999999999999999999999988654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.32  E-value=8.8e-06  Score=60.68  Aligned_cols=73  Identities=22%  Similarity=0.306  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHH-HHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecc
Q 022936          211 MTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       211 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                      .+..|.++...++. .+.+.++.++ ..+......|+++.++|.++++|+++..++.|+++++.|+.+..+.+.+
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            44455555534443 3468888885 7788889999999999999999999999999999999999998775543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.28  E-value=2e-05  Score=68.91  Aligned_cols=108  Identities=18%  Similarity=0.120  Sum_probs=83.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHc-CccccCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHH
Q 022936           17 GISLMVYQNFISVVTVTILSFL-GVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG   94 (290)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll   94 (290)
                      +...+.+++.++...+.+.... +.......+.+.+......+++ ......++++++++.+++.+.++.++.|++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~  256 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL  256 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            5667788888877665554322 2111112244566666666665 4568889999999999999999999999999999


Q ss_pred             HHHHhCccCChHHHHHHHHHHHhhhhheec
Q 022936           95 EMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        95 ~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      +++++||++++.++.+.++++.|+.+....
T Consensus       257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        257 GTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999887543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.26  E-value=4.5e-05  Score=67.02  Aligned_cols=128  Identities=7%  Similarity=-0.014  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHH
Q 022936          138 INCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFL  217 (290)
Q Consensus       138 ~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (290)
                      .--.+...+++++|..+++        -..|..+.+.+...+.....+... .+ ..   +.+. .+...|..+...|++
T Consensus         9 ~w~~~~~~~~~~NK~~l~~--------~~~P~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~-~~~~~~~~~~~~g~~   74 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNV--------FPYPYFKTLISLAVGSLYCLLSWS-SG-LP---KRLK-ISSALLKLLLPVAIV   74 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhh--------CChhHHHHHHHHHHHHHHHHHHHH-hC-CC---CCCC-CCHHHHHHHHHHHHH
Confidence            3344455566777887752        135777777777666555443311 11 11   1111 112235556667777


Q ss_pred             HHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          218 GLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       218 ~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      ........+.+++++++...++.....|+++.+++.++++|+++..+++|.++++.|+.+..
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            65555566789999999999999999999999999999999999999999999999997754

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.25  E-value=1.8e-05  Score=69.26  Aligned_cols=108  Identities=14%  Similarity=0.212  Sum_probs=77.6

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhhHHHHH
Q 022936           13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVIT   91 (290)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~   91 (290)
                      +.+ |.... ++...+.+.+.+....... ....+.+.+...+..+++ ..+...++++++++++++.++.+.++.|++.
T Consensus       173 ~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a  249 (293)
T PRK10532        173 EHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALA  249 (293)
T ss_pred             cCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHH
Confidence            345 55554 4444444444333322211 122344444444455655 4568889999999999999999999999999


Q ss_pred             HHHHHHHhCccCChHHHHHHHHHHHhhhhhee
Q 022936           92 AVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (290)
Q Consensus        92 ~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~  123 (290)
                      .++++++++|++++.++++.++++.|++....
T Consensus       250 ~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        250 AVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999988743

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.20  E-value=2.1e-05  Score=68.95  Aligned_cols=79  Identities=10%  Similarity=0.047  Sum_probs=68.1

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhee
Q 022936           45 PLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (290)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~  123 (290)
                      ..+.+.+...+..++.......++++++++.+++..+...++.|++..++++++++|+++..++.+.++++.|+.+...
T Consensus       209 ~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        209 VFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            3455556555555655667899999999999999999999999999999999999999999999999999999887643

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.19  E-value=0.00087  Score=59.44  Aligned_cols=234  Identities=10%  Similarity=0.066  Sum_probs=140.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hhHHHHHHHHHHHHhCccC-------ChHHHHHHHHHHH
Q 022936           45 PLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRH-------DNRVWAALFLMII  116 (290)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~~~~~e~~-------~~~~~~~~~l~~~  116 (290)
                      ..+.+.+..-+..+++....+.....+.+++.+|...-+. .++-+...++..++++|=.       ......+++++++
T Consensus        67 ~~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~lili  146 (345)
T PRK13499         67 SFSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALI  146 (345)
T ss_pred             hcCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHH
Confidence            3556666667778888999999999999999988776544 6777788888888887632       2456778889999


Q ss_pred             hhhhhee----ccc--------cc-chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHH----hH
Q 022936          117 SAISGGI----TDL--------SF-HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS----LS  179 (290)
Q Consensus       117 G~~l~~~----~~~--------~~-~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  179 (290)
                      |+++.+.    .|.        ++ ...|..+++.+.+.++.|......-+.. ++.......++.....-+..    .+
T Consensus       147 Gi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~-~~~a~~~g~~~~~~~lp~~~~~~~G~  225 (345)
T PRK13499        147 GVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPM-HEAAAALGVDPLYAALPSYVVIMGGG  225 (345)
T ss_pred             HHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccch-hhhhhhcCCCchHHHHHHHHHHHHHH
Confidence            9999876    332        12 2479999999999999999544443211 10000112333322222221    11


Q ss_pred             HHHHHHHHHH---h-cchhhhhcCCCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhh---hh-hhhhHHHH
Q 022936          180 LPLGVLLVIV---F-NEVDYLSRTPLLRL--PSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL---VG-SLNKIPLS  249 (290)
Q Consensus       180 ~~~~~~~~~~---~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si---~~-~~~~v~~~  249 (290)
                      ....+.++..   . .+++...+......  ..-....+..|+.-...++....+..+.+.....+   +. ...-+++.
T Consensus       226 ~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist  305 (345)
T PRK13499        226 AITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN  305 (345)
T ss_pred             HHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence            1222222221   1 11111111111000  11123345556665555555455666665444433   34 66668999


Q ss_pred             HHhHhhccCCCC------chhHHHHHHHHhhhhhhhe
Q 022936          250 VAGILLFKVPTS------LENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       250 i~~~~~~~e~~~------~~~~~G~~lil~g~~l~~~  280 (290)
                      +.|+ +++|.=+      ...++|+++++.|..+...
T Consensus       306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            9999 5999876      5668999999999887654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.12  E-value=5.2e-05  Score=59.45  Aligned_cols=118  Identities=15%  Similarity=0.201  Sum_probs=89.7

Q ss_pred             eehhhhhc-----cCCChhHHHHHHHHHHHHHHHHHHHH-cCcccc----Ccc-------cHHHHHHHHHHHHHHHHHHH
Q 022936            4 VNKFVLSG-----YNFDAGISLMVYQNFISVVTVTILSF-LGVIST----EPL-------TWRLIKVWLPVNVIFVGMLI   66 (290)
Q Consensus         4 ~nK~~~~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~   66 (290)
                      ..|..+++     .+.+ |..+..+....+.+.+.+... .+..+.    .+.       +.+.+..++..+++....+.
T Consensus        18 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~   96 (153)
T PF03151_consen   18 LIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNL   96 (153)
T ss_pred             HHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence            34666665     4677 888888888777776665543 222211    011       11234445556677788999


Q ss_pred             HhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhe
Q 022936           67 TSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (290)
Q Consensus        67 ~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~  122 (290)
                      ..+..++++++-+++++.....+.+.+.+.++++|+++..++.|+++.+.|..+-+
T Consensus        97 ~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   97 SSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            99999999999999999999999999999999999999999999999999987643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.99  E-value=0.00012  Score=64.27  Aligned_cols=80  Identities=10%  Similarity=0.001  Sum_probs=68.4

Q ss_pred             cccHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhee
Q 022936           45 PLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (290)
Q Consensus        45 ~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~  123 (290)
                      +.+.+.+...+..+++ ......++++++++.+++.+..+..+.|++..++++++++|+++..++.+.++++.|+.+...
T Consensus       208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            3455666666666655 456888999999999999999999999999999999999999999999999999999987654


Q ss_pred             c
Q 022936          124 T  124 (290)
Q Consensus       124 ~  124 (290)
                      +
T Consensus       288 ~  288 (299)
T PRK11453        288 G  288 (299)
T ss_pred             c
Confidence            3

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.90  E-value=0.00043  Score=60.90  Aligned_cols=130  Identities=16%  Similarity=0.189  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHhhhhhhccccCCC-ChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHHHH
Q 022936          143 TASYSLTLRRVMDTAKQVTKSGNL-NEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAI  221 (290)
Q Consensus       143 ~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (290)
                      +..+.+.++++.+..      ... .++.+++.+.........+......     . .+....+  +.-....+++....
T Consensus        12 ~~~~g~~qE~i~~~~------~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~-~~~~~~~--~~~~~~~~~~~~~~   77 (303)
T PF08449_consen   12 CCSYGILQEKIMTTP------YGSPFPLFLTFVQFAFNALFSFILLSLFK-----F-PKSRKIP--LKKYAILSFLFFLA   77 (303)
T ss_pred             HHHHHHHHHHHHcCC------CCCcccHHHHHHHHHHHHHHHHHHHHhcc-----c-cCCCcCh--HHHHHHHHHHHHHH
Confidence            334567788887631      122 3666677776666655554433322     0 1111111  22233445555566


Q ss_pred             HHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          222 SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       222 ~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      ....+.++++++..+..+.-..+++..++++.++++++.+..++.+.+++.+|+.+....+.+++
T Consensus        78 ~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   78 SVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            66777899999999999999999999999999999999999999999999999999887665443

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.88  E-value=0.00039  Score=60.74  Aligned_cols=134  Identities=12%  Similarity=0.109  Sum_probs=90.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      |+++++.++++++...+..|+..          +.++.+..  -...+............+       |..+.+..+..-
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~----------g~~~~~~~--~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~g   62 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG----------GGPYSQTL--GTTFGALILSIAIAIFVL-------PEFWALSIFLVG   62 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC----------CCHHHHHH--HHHHHHHHHHHHHHHHhC-------CcccccHHHHHH
Confidence            67889999999999999988862          12333322  122222222222222111       111223445555


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhhh-hhhHHHHHHhHhhccCCCCchh----HHHHHHHHhhhhhhheeecc
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGS-LNKIPLSVAGILLFKVPTSLEN----SASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~-~~~v~~~i~~~~~~~e~~~~~~----~~G~~lil~g~~l~~~~~~~  284 (290)
                      +..|+.-...|+..+.++++.+....-...+ ..++...+.+.++|+|+.+.++    ++|+++++.|+++....+.+
T Consensus        63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~  140 (290)
T TIGR00776        63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK  140 (290)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc
Confidence            6666665556677778999998888866666 7788999999999999999999    99999999999887665433

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.85  E-value=0.00011  Score=54.42  Aligned_cols=53  Identities=19%  Similarity=0.155  Sum_probs=48.6

Q ss_pred             HHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          227 WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       227 ~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      .++++.+...+...-.+.++.+.++|+++|||++|+.+++|+++++.|+.+..
T Consensus        56 ~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         56 LVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            58888988888888889999999999999999999999999999999988764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.83  E-value=0.00018  Score=54.75  Aligned_cols=70  Identities=9%  Similarity=0.160  Sum_probs=61.3

Q ss_pred             HHHHH-HHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHH--HhCccCChHHHHHHHHHHHhhhhheec
Q 022936           55 LPVNV-IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY--LFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        55 ~~~~~-~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~--~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      +..++ ++....++.++++++.|++.+..+.+..++.+.+.++.  ++||++++.++.+++++++|+.++..+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            44554 46779999999999999999999999999888888885  799999999999999999999998643

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.78  E-value=0.0002  Score=61.67  Aligned_cols=217  Identities=12%  Similarity=0.071  Sum_probs=125.9

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecccccc--------
Q 022936           58 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFH--------  129 (290)
Q Consensus        58 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~~~~~--------  129 (290)
                      -+.+......++.|..+.|++..+-+.++..+..++++..++|||.+....+++++++.|..++....+..+        
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el  150 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV  150 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence            345677888899999999999999999999999999999999999999999999999999998865432110        


Q ss_pred             -----hhhHHH-HHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHH---HHHhcchhh-hhcC
Q 022936          130 -----AVGYAW-QIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLL---VIVFNEVDY-LSRT  199 (290)
Q Consensus       130 -----~~G~~~-~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~  199 (290)
                           -.+++. ...-.+...+-..+.|+.            .....++.|..+.+....+=.   --+.+-.+. ....
T Consensus       151 ~~~~~~~~Fliy~~~iil~~~il~~~~~p~------------~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~  218 (335)
T KOG2922|consen  151 WELATEPGFLVYVIIIILIVLILIFFYAPR------------YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN  218 (335)
T ss_pred             HHHhcCccHHHHHHHHHHHHHHHheeeccc------------ccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC
Confidence                 112111 111111111111112211            122233445444333321100   000000111 1112


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhh-hhhhHHHHHHhHhhccC--CCCchh----HHHHHHHH
Q 022936          200 PLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVG-SLNKIPLSVAGILLFKV--PTSLEN----SASIFFGL  272 (290)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~-~~~~v~~~i~~~~~~~e--~~~~~~----~~G~~lil  272 (290)
                      +....+..|...+....+....-...+++++..++...+-+. ..=.-+++..|.++|.|  ..+..+    ..|..+++
T Consensus       219 ~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~  298 (335)
T KOG2922|consen  219 NQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIF  298 (335)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhh
Confidence            222334556555555555444433456777766544444333 44466777788888876  345444    56777888


Q ss_pred             hhhhhhheeecccc
Q 022936          273 LAGVFFARAKMWER  286 (290)
Q Consensus       273 ~g~~l~~~~~~~~~  286 (290)
                      .|+++.+..|.++.
T Consensus       299 ~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  299 LGIFLLHRTKDMEI  312 (335)
T ss_pred             heeeEeeeeccccc
Confidence            99998877666654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.61  E-value=0.0033  Score=54.29  Aligned_cols=139  Identities=20%  Similarity=0.164  Sum_probs=88.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHH
Q 022936          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (290)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (290)
                      .+....+..++.++......|+..++        +.+.....++....+.+...+... . +.  ....+...+  .+..
T Consensus         7 ~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~--~~~~   72 (292)
T COG0697           7 LGLLALLLWGLLWGLSFIALKLAVES--------LDPFLFAAALRFLIAALLLLPLLL-L-EP--RGLRPALRP--WLLL   72 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc--------cCChHHHHHHHHHHHHHHHHHHHH-h-hc--ccccccccc--hHHH
Confidence            56677777778888888877777541        234444445444444443221111 1 11  001111111  1223


Q ss_pred             HHHHHHHHHHH-HHHHHHHHhhcCcchhhhhhhhhhHHHHHHhH-hhccCCCCchhHHHHHHHHhhhhhhheeecc
Q 022936          211 MTLSGFLGLAI-SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGI-LLFKVPTSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       211 ~~~~~~~~~~~-~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~-~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                       ...+.+.... .+..+.+++++++...+......|+...+++. .+++|+++..+++|..+.+.|+++.......
T Consensus        73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          73 -LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence             3334444444 44445689999999999999999999999997 6669999999999999999999988765443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.53  E-value=0.00073  Score=50.57  Aligned_cols=71  Identities=14%  Similarity=0.139  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec
Q 022936           54 WLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        54 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      ....-+++....++...+++++|.+.+-.+ ...--+.+.+.+.+++||++++.++.++.+++.|+..+...
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            345556678899999999999999987666 56888999999999999999999999999999999988543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.53  E-value=0.005  Score=47.50  Aligned_cols=130  Identities=15%  Similarity=0.237  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCC-ChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNL-NEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       133 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      .++++.+...-+.+...+.|+-+         +. +++.-.+.+...+...+.......++. +..+.+   +...|.  
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~---------~~gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~---~~p~w~--   67 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGK---------ALGSPLVASFISFGVGFILLLIILLITGRP-SLASLS---SVPWWA--   67 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---------HhCccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhc---cCChHH--
Confidence            56778888888888888888754         23 488888888888888777766665543 121111   111132  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhh-HHHHHHhHh-hc---cCCCCchhHHHHHHHHhhhhh
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK-IPLSVAGIL-LF---KVPTSLENSASIFFGLLAGVF  277 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~-v~~~i~~~~-~~---~e~~~~~~~~G~~lil~g~~l  277 (290)
                      ...|+++...-++....+++.++.........-. +.+.++..+ +|   .+++++.+.+|+++++.|+.+
T Consensus        68 ~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   68 YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            3478888887777778999999998888776554 444455443 33   368999999999999999763

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.45  E-value=0.0001  Score=61.08  Aligned_cols=219  Identities=16%  Similarity=0.165  Sum_probs=146.5

Q ss_pred             CcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hhHHHHHHHHHHHHhCccCChHH----HHHHHHHHHhh
Q 022936           44 EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRV----WAALFLMIISA  118 (290)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~~~~~e~~~~~~----~~~~~l~~~G~  118 (290)
                      |..+.+.+..-+..+++....+...+.|.+++.+|-+.-+. .+.-+-+-+++.+.++|=.+..+    ..++++++.|+
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~  131 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI  131 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence            45565666666677788899999999999999888765444 45666777888888999665544    35678888899


Q ss_pred             hhheeccc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHh
Q 022936          119 ISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVF  190 (290)
Q Consensus       119 ~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (290)
                      .+.+..|.        ++.-.|....+.|.+.|-.|.+..+..           +.+.++..+-+........+.+....
T Consensus       132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-----------~v~g~saiLPqAiGMv~~ali~~~~~  200 (288)
T COG4975         132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF-----------DVDGLSAILPQAIGMVIGALILGFFK  200 (288)
T ss_pred             eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc-----------cccchhhhhHHHHHHHHHHHHHhhcc
Confidence            99887654        112468888888999999998876665           34555544444443333333333322


Q ss_pred             cchhhhhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhH----H
Q 022936          191 NEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENS----A  266 (290)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~----~  266 (290)
                      +|-        ..+...|. -+..|+.--..|...+.+.++.+-.+.=..+.+..+.+++-|+++++|+=|.+++    +
T Consensus       201 ~~~--------~~~K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         201 MEK--------RFNKYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             ccc--------chHHHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            211        11122232 2344555445565555566677666666667777899999999999999998775    6


Q ss_pred             HHHHHHhhhhhhheee
Q 022936          267 SIFFGLLAGVFFARAK  282 (290)
Q Consensus       267 G~~lil~g~~l~~~~~  282 (290)
                      |+.++++|..+....|
T Consensus       272 Giilivvgai~lg~~K  287 (288)
T COG4975         272 GIILIVVGAILLGIAK  287 (288)
T ss_pred             hHHHHHHHhhhhheec
Confidence            7788888877665443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.43  E-value=0.0014  Score=48.34  Aligned_cols=69  Identities=13%  Similarity=0.175  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhhhhhcccchhHHHHH-HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec
Q 022936           56 PVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        56 ~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      ..-+++....++...+++++|.+.+-.+ ...--+.+.+.+++++||++++.++.++.+++.|+......
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3445677788888999999999988776 45788889999999999999999999999999999988643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.39  E-value=0.0013  Score=49.25  Aligned_cols=59  Identities=15%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             HHHhhcCcc-hhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          227 WFLHQTGAT-TYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       227 ~~i~~~~~~-~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      .++|+.+-. -+++...+..+.+.++|+++|||++|+.+++|+++++.|++..+...+++
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            466665433 35566667888899999999999999999999999999999987655443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.33  E-value=0.0014  Score=48.42  Aligned_cols=57  Identities=9%  Similarity=0.029  Sum_probs=46.7

Q ss_pred             HHHhhcCcc-hhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeec
Q 022936          227 WFLHQTGAT-TYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM  283 (290)
Q Consensus       227 ~~i~~~~~~-~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~  283 (290)
                      .++|+.+-. .+++...+..+.+++.|+++|||++|+.+++|+++++.|++..+..++
T Consensus        49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            466666433 456667778889999999999999999999999999999999876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.29  E-value=0.0098  Score=43.73  Aligned_cols=68  Identities=13%  Similarity=0.183  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHH-HHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhe
Q 022936           55 LPVNVIFVGMLITSMFSLKYINVAMVTV-LKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (290)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~-i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~  122 (290)
                      ...-+++....++...+++++|.+.+-. -...-.+.+.+.+.+++||++++.++.++.+++.|+....
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3444557778888899999999887654 4457788899999999999999999999999999998763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.25  E-value=0.0027  Score=46.09  Aligned_cols=70  Identities=17%  Similarity=0.105  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHH-HHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec
Q 022936           55 LPVNVIFVGMLITSMFSLKYINVAMVT-VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      ...-+++.....+.-.|++++|.+.+- +-...-.+.+.+.+++++||+.+..++.++.+++.|+......
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            444556777888889999999988764 4456778889999999999999999999999999999987543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.24  E-value=0.011  Score=52.37  Aligned_cols=73  Identities=11%  Similarity=0.160  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          208 WLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      |.+++ .+++=...||....+.+.++.+...++.....+.++++++++++++.++.|++|+.+++.|+.+....
T Consensus        80 w~y~l-la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   80 WKYFL-LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            44433 46777888999889999999999999999999999999999999999999999999999999886654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.22  E-value=0.0039  Score=45.57  Aligned_cols=69  Identities=12%  Similarity=0.149  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhee
Q 022936           55 LPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (290)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~  123 (290)
                      ...-+++....++...+++.+|.+.+-.+ ...-.+.+.+.+.+++||+.++.++.++.+++.|+.....
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34455677888888999999998876544 4577889999999999999999999999999999998753

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.12  E-value=0.014  Score=42.84  Aligned_cols=53  Identities=17%  Similarity=0.177  Sum_probs=45.4

Q ss_pred             HHHhhcCc-chhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhh
Q 022936          227 WFLHQTGA-TTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFA  279 (290)
Q Consensus       227 ~~i~~~~~-~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~  279 (290)
                      .+.|+.+. +.+++..-+-.+.+.+.|+++|+|++|+.+++|+++++.|++..+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            46776653 457888888899999999999999999999999999999998753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.05  E-value=0.0023  Score=54.40  Aligned_cols=73  Identities=12%  Similarity=0.093  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecc
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                      ..-+++-.+.|...+.++++.+|.+..+....|.+.+.++++++++.+++..||.++.+...|+.+.+.....
T Consensus        21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3445555566777778999999999999999999999999999999999999999999999999998765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.02  E-value=0.0048  Score=54.06  Aligned_cols=123  Identities=15%  Similarity=0.112  Sum_probs=81.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHH
Q 022936          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (290)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (290)
                      ...|..+++.++++.+....++||-..+.+.  ++.+.+ .+              +             .+...++..|
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~--~~~~~~-~~--------------~-------------~~~l~~~~W~   54 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR--GSLRAG-SG--------------G-------------RSYLRRPLWW   54 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccccc-ch--------------h-------------hHHHhhHHHH
Confidence            3579999999999999999999986543211  000000 00              0             0001112223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      ..++ ..+.+-..++   .+....+++..+-++.+.-+...+++..+++|+++..++.|+++++.|..+......++
T Consensus        55 ~G~~-~~~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   55 IGLL-LMVLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHHH-HHhcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            3322 2333434444   36666777778888888999999999999999999999999999999998765443333

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.88  E-value=0.0069  Score=43.98  Aligned_cols=55  Identities=16%  Similarity=0.181  Sum_probs=47.3

Q ss_pred             HHHhhcCc-chhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          227 WFLHQTGA-TTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       227 ~~i~~~~~-~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      +++|+.+- +-+++.+-+-.+.+.+.|+++|+|+.++.+++|+.+++.|++..+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            46777643 45788888999999999999999999999999999999999887653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.86  E-value=0.005  Score=44.03  Aligned_cols=58  Identities=14%  Similarity=0.177  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHhhhhhcccchhHH-HHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHH
Q 022936           57 VNVIFVGMLITSMFSLKYINVAMV-TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLM  114 (290)
Q Consensus        57 ~~~~~~~~~~~~~~al~~~~~~~~-~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~  114 (290)
                      .-.++....++..++++++|.+.+ .+......+.+.+.+.+++||+++..++.++.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            334678888999999999999887 4456789999999999999999999999998753

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.84  E-value=0.047  Score=48.06  Aligned_cols=141  Identities=13%  Similarity=0.131  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcch--hh-hhcCC--CCcchhHHHH
Q 022936          136 QIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEV--DY-LSRTP--LLRLPSFWLV  210 (290)
Q Consensus       136 ~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~--~~~~~~~~~~  210 (290)
                      .+...+..+.+....|...+.     ++.++.+.+.++.+=..-++++....+.....  .. ..+..  .+.++..-.-
T Consensus        20 l~~~t~~~~~l~l~l~ys~~~-----~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   20 LIVLTAQNTALTLLLRYSRTR-----EKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHhhHHHHHHHHhcC-----CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            334444555555555554332     13356777777777777777666555432101  11 11111  1112211112


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhee
Q 022936          211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARA  281 (290)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~  281 (290)
                      +..-+++-.+.|...+....+.+|++..+...+|...+.++++.+++++++..||...++...|+...+..
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            22223333344555566899999999999999999999999999999999999999999999999998843

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.84  E-value=0.0092  Score=43.61  Aligned_cols=54  Identities=15%  Similarity=0.239  Sum_probs=45.7

Q ss_pred             HHHhhcCc-chhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          227 WFLHQTGA-TTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       227 ~~i~~~~~-~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      .+.|+.+- ..+++..-+..+.+.+.|+++|+|++|+.+++|+++++.|++..+.
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            46666543 4578888888999999999999999999999999999999988653

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.67  E-value=0.022  Score=47.70  Aligned_cols=67  Identities=15%  Similarity=0.209  Sum_probs=58.1

Q ss_pred             HHHHHHH-HHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhh
Q 022936           55 LPVNVIF-VGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG  121 (290)
Q Consensus        55 ~~~~~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~  121 (290)
                      +..+++- ..-..+...++++.|..++.++-++.|.+.++.++++++|.+|..+|.++..++.+..-.
T Consensus       213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            3444443 457788899999999999999999999999999999999999999999999888877643

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.58  E-value=0.031  Score=49.74  Aligned_cols=135  Identities=12%  Similarity=0.057  Sum_probs=83.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHH--HHhHHHHHHHH---HHHhcchhhhhcCCCCcc
Q 022936          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLN--NSLSLPLGVLL---VIVFNEVDYLSRTPLLRL  204 (290)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  204 (290)
                      ..|+++.+++.+|++-+.+-.||. +         + -.||.. +-  .+++.. ..|+   .+..++..+..  . ..+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k---------~-w~wE~~-W~v~gi~~wl-~~~~~~g~~~~~~f~~~~--~-~~~   69 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-K---------K-WSWETM-WSVGGIFSWL-ILPWLIAALLLPDFWAYY--S-SFS   69 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-C---------C-CchhHH-HHHHHHHHHH-HHHHHHHHHHhhhHHHHH--H-hcC
Confidence            479999999999999999988883 2         1 233432 21  111111 1121   11111111111  1 122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhh-hhhhhhhHHHHHHhHhhccCCC---C----chhHHHHHHHHhhhh
Q 022936          205 PSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYS-LVGSLNKIPLSVAGILLFKVPT---S----LENSASIFFGLLAGV  276 (290)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~s-i~~~~~~v~~~i~~~~~~~e~~---~----~~~~~G~~lil~g~~  276 (290)
                      +..+....++|++--..|.....++|+.+-...- +..-+.-+...+++.+++||-.   +    ....+|++++++|+.
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            3445666777877777777777788877655443 3345667888899999998643   2    457789999999999


Q ss_pred             hhhe
Q 022936          277 FFAR  280 (290)
Q Consensus       277 l~~~  280 (290)
                      +.++
T Consensus       150 l~s~  153 (345)
T PRK13499        150 IVGR  153 (345)
T ss_pred             HHHH
Confidence            9887

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.47  E-value=0.002  Score=54.17  Aligned_cols=68  Identities=16%  Similarity=0.193  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhhe
Q 022936          213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                      +=|+.|+..-+..|++.++.+-..+++.....|++++++++.+++|+.|....+|..+.+.|+++..+
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence            44555555555556688888888899999999999999999999999999999999999999998754

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.37  E-value=0.011  Score=42.29  Aligned_cols=45  Identities=16%  Similarity=0.173  Sum_probs=25.6

Q ss_pred             HHHhhcCcchh-hhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHH
Q 022936          227 WFLHQTGATTY-SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG  271 (290)
Q Consensus       227 ~~i~~~~~~~~-si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~li  271 (290)
                      .+.|+.+...+ ++...+..+...+.|+.+|||++|+.++.|++++
T Consensus        48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            57787765544 6777788999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.11  E-value=0.063  Score=46.01  Aligned_cols=71  Identities=18%  Similarity=0.252  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHH----HHHHHHHhhh
Q 022936           49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWA----ALFLMIISAI  119 (290)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~----~~~l~~~G~~  119 (290)
                      |+-.+-+..++++...+.++..|.+....+..-.+.++.++...+.+.+++||+=+++++.    ++++++.|.+
T Consensus       193 k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  193 KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            3344557889999999999999999999999999999999999999999999988877654    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.99  E-value=0.023  Score=41.93  Aligned_cols=61  Identities=13%  Similarity=0.156  Sum_probs=51.8

Q ss_pred             HHHHHHHhhhhhcccchhHHHHHH-hhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhh
Q 022936           61 FVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG  121 (290)
Q Consensus        61 ~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~  121 (290)
                      +......+++.+...+.|.+.-+. +++=++|++.++++.+|..+++++.++.+++.|+.+.
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            445667778899999999887774 8999999999988777778999999999999998764

Many members are annotated as potential transmembrane proteins.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.11  E-value=1.2  Score=34.64  Aligned_cols=137  Identities=17%  Similarity=0.164  Sum_probs=83.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHH
Q 022936          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (290)
Q Consensus       131 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (290)
                      ...+.++.+..+...+.-.+.|+-+..       + +|.--.+.++..+...+.......++.+.....  ...|  |..
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~-------~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~--~~~p--wW~   72 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYL-------G-SPLLASLISFLVGTVLLLILLLIKQGHPGLAAV--ASAP--WWA   72 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHc-------C-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhc--cCCc--hHH
Confidence            456777888888888888888875521       1 455555666666666665555443222211110  1111  222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhh-hHHHHHHhHh-hcc---CCCCchhHHHHHHHHhhhhhhhe
Q 022936          211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLN-KIPLSVAGIL-LFK---VPTSLENSASIFFGLLAGVFFAR  280 (290)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~-~v~~~i~~~~-~~~---e~~~~~~~~G~~lil~g~~l~~~  280 (290)
                       ...|+++..+-..+.....+.+++++....... .+.+.++..+ ++|   .+++...++|+++++.|+++...
T Consensus        73 -~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          73 -WIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             -HHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence             345677766666666778888887766655443 3444444443 233   56999999999999999665543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.99  E-value=0.025  Score=47.23  Aligned_cols=132  Identities=11%  Similarity=0.128  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      +++.++.=++.++.--....|.           .-+|.+...-+++.++.+.+...++..        |.. +...+...
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~-----------GG~p~qQ~lGtT~GALifaiiv~~~~~--------p~~-T~~~~iv~   62 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF-----------GGKPYQQTLGTTLGALIFAIIVFLFVS--------PEL-TLTIFIVG   62 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec-----------CCChhHhhhhccHHHHHHHHHHheeec--------Ccc-chhhHHHH
Confidence            4566667777776554443333           224555455555555554444333211        111 12234556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcchhhhhh-hhhhHHHHHHhHhhccCCCCchhH----HHHHHHHhhhhhhheeec
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVG-SLNKIPLSVAGILLFKVPTSLENS----ASIFFGLLAGVFFARAKM  283 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~~~si~~-~~~~v~~~i~~~~~~~e~~~~~~~----~G~~lil~g~~l~~~~~~  283 (290)
                      +.+|.+-...+...+++.+..+...+.-++ -.+-+-+.+.|++.|+|..+..+.    +..++++.|+.+.++.++
T Consensus        63 ~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          63 FISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             HHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            777877777777777787777766665554 345688889999999998887664    466778889888877665

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.62  E-value=0.07  Score=47.29  Aligned_cols=77  Identities=10%  Similarity=0.017  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      ...++-|.+-+..+|..+-+++.++.....++......++..+|.++-+|++|+...++..+.+.|+++.+..+.|+
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            34566677778888888889999999999999999999999999999999999999999999999999988765544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.52  E-value=0.72  Score=35.51  Aligned_cols=104  Identities=13%  Similarity=0.076  Sum_probs=72.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcc-ccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hhHHHHHHH
Q 022936           16 AGISLMVYQNFISVVTVTILSFLGVI-STEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAV   93 (290)
Q Consensus        16 ~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~l   93 (290)
                      .|..-++.-+..+.+.+.++....+. +.++.. +.-.....-+++-.....+..++...+.++....+. .-.-+...+
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~  107 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL  107 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            38888888888888777665543322 222221 111223346777788888899999999988777655 556677777


Q ss_pred             HHHH----HhCccCChHHHHHHHHHHHhhhh
Q 022936           94 GEMY----LFNKRHDNRVWAALFLMIISAIS  120 (290)
Q Consensus        94 l~~~----~~~e~~~~~~~~~~~l~~~G~~l  120 (290)
                      ++.+    .-|+++++.|..++.+.+.|+.+
T Consensus       108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            7875    34678999999999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=93.91  E-value=0.073  Score=46.79  Aligned_cols=116  Identities=14%  Similarity=0.155  Sum_probs=86.3

Q ss_pred             hhhhh--ccCCChhHHHHHHHHHHHHHHHH-HHHHc--C-cc---ccCcccHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022936            6 KFVLS--GYNFDAGISLMVYQNFISVVTVT-ILSFL--G-VI---STEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYIN   76 (290)
Q Consensus         6 K~~~~--~~~~~~p~~l~~~r~~~~~~~l~-~~~~~--~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~   76 (290)
                      |.++.  +.+++ +..+..++--++.+.+. +....  + ..   ...+++.+ ...+...+++....|...+..+.+++
T Consensus       183 ~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tS  260 (316)
T KOG1441|consen  183 KKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTS  260 (316)
T ss_pred             HHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHHHHcccC
Confidence            44552  45677 88888888877776665 44321  2 11   12233333 23334445777788888999999999


Q ss_pred             hhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhhee
Q 022936           77 VAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (290)
Q Consensus        77 ~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~  123 (290)
                      +-++++.....-+.+.+.++.+++++.++.+..+..+.++|+.+-+.
T Consensus       261 alT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  261 ALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             chhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998899999999999999998754

>TIGR00803 nst UDP-galactose transporter

Probab=92.99  E-value=0.18  Score=42.07  Aligned_cols=63  Identities=10%  Similarity=0.247  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhh
Q 022936           58 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (290)
Q Consensus        58 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l  120 (290)
                      .+..+....+-...+++.+.....+...+.++++.+++.++++|+++...+.+..+.+.|+.+
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344555666778888999999999999999999999999999999999999999998888653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=91.91  E-value=0.61  Score=34.47  Aligned_cols=51  Identities=16%  Similarity=0.047  Sum_probs=38.7

Q ss_pred             HHhhcCcchhhhh-hhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhh
Q 022936          228 FLHQTGATTYSLV-GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFF  278 (290)
Q Consensus       228 ~i~~~~~~~~si~-~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~  278 (290)
                      .+++.+-+.+.-+ +.+.-+++.+.++++.+|..+...++|+++++.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            4555544444443 57777899999988888888999999999999998653

Many members are annotated as potential transmembrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.66  E-value=1.1  Score=37.55  Aligned_cols=71  Identities=14%  Similarity=0.119  Sum_probs=56.2

Q ss_pred             HHHHHHHHHH-HHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecc
Q 022936          214 SGFLGLAISF-TSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       214 ~~~~~~~~~~-~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                      .+..++.++. +.+.+++..+=-+..+.-.-||+-.+++|+.+.+..-+|..+....+|.+|+.++.+.+.|
T Consensus        90 Acs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   90 ACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            3444555544 3456777776666667778999999999999999999999999999999999998875444

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.50  E-value=1.7  Score=36.00  Aligned_cols=102  Identities=17%  Similarity=0.253  Sum_probs=74.3

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHc-Ccccc----CcccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhH
Q 022936           13 NFDAGISLMVYQNFISVVTVTILSFL-GVIST----EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVT   87 (290)
Q Consensus        13 ~~~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~   87 (290)
                      .|. ...-+++..+.+..++..+... ..+..    ..++.+.+..++..|++-.+..++.-++++-++..++.+..++.
T Consensus       182 Nf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         182 NFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             ccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhh
Confidence            454 5667788888888777666543 22211    23344456667778888889999999999999999999999988


Q ss_pred             HHHHHHHHHHHhCccCChHHHHHHHHHH
Q 022936           88 NVITAVGEMYLFNKRHDNRVWAALFLMI  115 (290)
Q Consensus        88 pi~~~ll~~~~~~e~~~~~~~~~~~l~~  115 (290)
                      -...++-+.++++|..+..++.++.+.+
T Consensus       261 Klp~alaGlvffdap~nf~si~sillGf  288 (309)
T COG5070         261 KLPIALAGLVFFDAPVNFLSIFSILLGF  288 (309)
T ss_pred             hChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence            8777777877788877777776665433

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=91.29  E-value=3  Score=36.90  Aligned_cols=24  Identities=21%  Similarity=0.534  Sum_probs=21.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH
Q 022936          130 AVGYAWQIINCFLTASYSLTLRRV  153 (290)
Q Consensus       130 ~~G~~~~l~s~~~~a~~~v~~~~~  153 (290)
                      ..|+++..+++++.+.+.+-.||.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv   29 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV   29 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc
Confidence            479999999999999999988887

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=90.69  E-value=0.55  Score=40.04  Aligned_cols=132  Identities=19%  Similarity=0.243  Sum_probs=70.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHH
Q 022936          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (290)
Q Consensus       132 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      |++.++.|+++++...+=.||.-          ..+++-.+.+.+...........+..+       .|.     ++...
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~----------~gDg~~fQw~~~~~i~~~g~~v~~~~~-------~p~-----f~p~a   58 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD----------TGDGFFFQWVMCSGIFLVGLVVNLILG-------FPP-----FYPWA   58 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc----------CCCcHHHHHHHHHHHHHHHHHHHHhcC-------CCc-----ceeHH
Confidence            56778888888887777666652          224544444443333332222222211       111     12233


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCcc-hhhhhhhhhhHHHHHHhHh-hccCC-----CCchhHHHHHHHHhhhhhhheeecc
Q 022936          212 TLSGFLGLAISFTSMWFLHQTGAT-TYSLVGSLNKIPLSVAGIL-LFKVP-----TSLENSASIFFGLLAGVFFARAKMW  284 (290)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~~~~-~~si~~~~~~v~~~i~~~~-~~~e~-----~~~~~~~G~~lil~g~~l~~~~~~~  284 (290)
                      ++.|.+-...|....-.+|.++-. -..+.+..+-+..-..|-+ +||++     -++.+++|++++++|..++...|.+
T Consensus        59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            344555444455444456655422 1223334444444444432 55532     3488999999999999999876655


Q ss_pred             c
Q 022936          285 E  285 (290)
Q Consensus       285 ~  285 (290)
                      +
T Consensus       139 ~  139 (254)
T PF07857_consen  139 E  139 (254)
T ss_pred             C
Confidence            5

The region concerned is approximately 280 residues long.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.85  E-value=11  Score=32.82  Aligned_cols=134  Identities=14%  Similarity=0.112  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHhhhh-hhccccCCC-ChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHHHHHHHHHHHHH
Q 022936          142 LTASYSLTLRRVMDTA-KQVTKSGNL-NEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGL  219 (290)
Q Consensus       142 ~~a~~~v~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (290)
                      .+-.+.++++|++++. .+  +++++ ++.-+.+.|.+.+........-   .++..  .+. ..+  |.--.+.++-..
T Consensus        25 t~l~~gVlQEki~T~~y~~--~~~rF~~~~fL~~~q~l~~~~~s~~~l~---~~k~~--~~~-~ap--l~~y~~is~tn~   94 (327)
T KOG1581|consen   25 TFLTWGVLQEKIMTRPYGE--DGERFEHSLFLVFCQRLVALLVSYAMLK---WWKKE--LSG-VAP--LYKYSLISFTNT   94 (327)
T ss_pred             HHHHHHHHhcceeecccCc--ccccccccHHHHHHHHHHHHHHHHHHHh---ccccc--CCC-CCc--hhHHhHHHHHhh
Confidence            3344667788876531 11  11222 4444566777766655532221   22211  111 111  223333444444


Q ss_pred             HHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeeccc
Q 022936          220 AISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWE  285 (290)
Q Consensus       220 ~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~  285 (290)
                      .-..+.+-++|+.|=-+..+.-.-|.+..++++.++.+.+.+...++-..++-+|+.++...+..+
T Consensus        95 ~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   95 LSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             cchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            445556679999998889999999999999999999999999999999999999999988775554

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.11  E-value=0.39  Score=38.89  Aligned_cols=62  Identities=13%  Similarity=0.035  Sum_probs=55.0

Q ss_pred             HHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeec
Q 022936          222 SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKM  283 (290)
Q Consensus       222 ~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~  283 (290)
                      +|.-..++++++|+.++-...-+..+.-++++.+++|++.-..++...+.+-|+++.++...
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            55555689999999999999999999999999999999999999999999999998776443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=88.99  E-value=0.21  Score=43.49  Aligned_cols=124  Identities=15%  Similarity=0.156  Sum_probs=78.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCChhHHHHHHHHhHHHHHHHHHHHhcchhhhhcCCCCcchhHH
Q 022936          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (290)
Q Consensus       129 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (290)
                      +..|..+++.|++..+...+..||-+.+....++.                          .++    ..++....+. |
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--------------------------a~~----gg~~yl~~~~-W   67 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--------------------------AGE----GGYGYLKEPL-W   67 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--------------------------ccC----CCcchhhhHH-H
Confidence            45688888888887777777777754421110000                          000    0111111222 3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheeecccc
Q 022936          209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAKMWER  286 (290)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~si~~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~~~~~  286 (290)
                      ...++.-..|=+.||.   +-...+++-.+-++.+.-+.+.+++..+++|+++....+|++++++|....-....+|+
T Consensus        68 w~G~ltm~vGei~NFa---AYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFA---AYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHHHHHhHhhHH---HHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            3333344444455654   34455666777778888999999999999999999999999999999877655444443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=87.95  E-value=8.8  Score=29.90  Aligned_cols=107  Identities=7%  Similarity=0.016  Sum_probs=67.3

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHcCccccCccc--HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHH-HHhhHHHH
Q 022936           14 FDAGISLMVYQNFISVVTVTILSFLGVISTEPLT--WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTV-LKNVTNVI   90 (290)
Q Consensus        14 ~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-i~~~~pi~   90 (290)
                      ...|..-.+.-+.++..++..+... +.+.++..  ++...-....|++.+.....+......+.++..++ ..+-.-+.
T Consensus        31 ~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~  109 (150)
T COG3238          31 LGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIM  109 (150)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHH
Confidence            3448888888888887766655444 22333333  22222233445555666666666777777665554 33556666


Q ss_pred             HHHHHHHHh----CccCChHHHHHHHHHHHhhhhh
Q 022936           91 TAVGEMYLF----NKRHDNRVWAALFLMIISAISG  121 (290)
Q Consensus        91 ~~ll~~~~~----~e~~~~~~~~~~~l~~~G~~l~  121 (290)
                      -+++..+=.    ++++++.++.++++.++|+.+.
T Consensus       110 glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238         110 GLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            677665543    3678999999999999995554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	290
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.52
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.46
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.31
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.24

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.52  E-value=1.3e-07  Score=71.63  Aligned_cols=67  Identities=9%  Similarity=-0.002  Sum_probs=45.2

Q ss_pred             HHHHHHHHHH-HHHHhhcCcchhhhh-hhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          216 FLGLAISFTS-MWFLHQTGATTYSLV-GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       216 ~~~~~~~~~~-~~~i~~~~~~~~si~-~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                      ++++..++.. .+++|+.+++++..+ ..+.|+.++++|+++|||++|+.+++|+++++.|+++.+..+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344444433 468999999988777 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.46  E-value=2.4e-06  Score=62.27  Aligned_cols=71  Identities=13%  Similarity=0.178  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheecc
Q 022936           55 LPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD  125 (290)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~~  125 (290)
                      ....+++....++..+++++.|.+.+..+ ..+.|+++.+++++++||++++.++.++.+++.|+.+....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33345577888999999999999999888 899999999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.31  E-value=9.5e-07  Score=66.86  Aligned_cols=70  Identities=13%  Similarity=0.178  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhHHHHHHHHHHHHhCccCChHHHHHHHHHHHhhhhheec
Q 022936           55 LPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (290)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~G~~l~~~~  124 (290)
                      +...+++.+..++.+++++++|++.+..+ .++.|+++.+++++++||++++.++.++.++++|+.+....
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33345578899999999999999988888 89999999999999999999999999999999999988643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.24  E-value=3.6e-06  Score=61.38  Aligned_cols=57  Identities=7%  Similarity=-0.033  Sum_probs=51.3

Q ss_pred             HHHHhhcCcchhhhh-hhhhhHHHHHHhHhhccCCCCchhHHHHHHHHhhhhhhheee
Q 022936          226 MWFLHQTGATTYSLV-GSLNKIPLSVAGILLFKVPTSLENSASIFFGLLAGVFFARAK  282 (290)
Q Consensus       226 ~~~i~~~~~~~~si~-~~~~~v~~~i~~~~~~~e~~~~~~~~G~~lil~g~~l~~~~~  282 (290)
                      .+++|+.+..++..+ ..+.|+.++++|+++|||++|+.+++|+++++.|++..+..+
T Consensus        48 ~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            358999988888666 899999999999999999999999999999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00