Citrus Sinensis ID: 022941
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 289 | ||||||
| 225469734 | 377 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.750 | 0.518 | 7e-78 | |
| 224091690 | 296 | predicted protein [Populus trichocarpa] | 0.975 | 0.952 | 0.498 | 2e-76 | |
| 255565017 | 299 | conserved hypothetical protein [Ricinus | 0.996 | 0.963 | 0.503 | 4e-74 | |
| 297735903 | 309 | unnamed protein product [Vitis vinifera] | 0.899 | 0.841 | 0.518 | 2e-71 | |
| 147820982 | 283 | hypothetical protein VITISV_025335 [Viti | 0.840 | 0.858 | 0.520 | 4e-64 | |
| 224142415 | 258 | predicted protein [Populus trichocarpa] | 0.871 | 0.976 | 0.455 | 2e-61 | |
| 449442983 | 288 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.965 | 0.441 | 3e-60 | |
| 449493689 | 288 | PREDICTED: uncharacterized protein LOC10 | 0.961 | 0.965 | 0.441 | 4e-60 | |
| 125554322 | 298 | hypothetical protein OsI_21928 [Oryza sa | 0.941 | 0.912 | 0.415 | 8e-56 | |
| 55771378 | 298 | unknown protein [Oryza sativa Japonica G | 0.923 | 0.895 | 0.411 | 2e-55 |
| >gi|225469734|ref|XP_002270656.1| PREDICTED: uncharacterized protein LOC100257638 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 203/297 (68%), Gaps = 14/297 (4%)
Query: 4 RPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLE 63
+PSWV T+ITQLSLCLA+ +A NLG+P + ++ S + + LD YFISV GGFRPL
Sbjct: 3 KPSWVRTVITQLSLCLAVLLAFNLGRPWEKPMSHSS--SGSSRPLDLYFISVRGGFRPLN 60
Query: 64 QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVG 123
QQT LLKQME AK+Y+ARFVIN SELGEDDPL QN TW F +LKVPWY+T+ S+ + G
Sbjct: 61 QQTHLLKQMEKAAKTYEARFVINISELGEDDPLTQNGTWRFSTLKVPWYSTRVSRGQGTG 120
Query: 124 CFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVG 183
F +QI++P G+ LDII ++TG+ + + + +G+ L+ L LE ++ W IVVG
Sbjct: 121 YFLKQIKIPFGKTLDIISLDTGAFKDFMLMNPLNGAGNDQLHGLTKTLETSDSDWRIVVG 180
Query: 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIE 243
F L +CE + E++E ++YE LHHIF KFGV+ YLS GC Y+R+DSI Y+ NPG I+
Sbjct: 181 FCSLAVCEGNRERIEI-QLYEHLHHIFYKFGVDVYLSGEGCSDYARKDSIAYIRNPGSID 239
Query: 244 -----------SGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
SG + MV+GFLLH+VSSLEI TYFV GEVV+ ++RGK M
Sbjct: 240 EKLPLASVNQISGFSKGMVNGFLLHRVSSLEIETYFVNSAGEVVHDVVLQQRGKAAM 296
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091690|ref|XP_002309329.1| predicted protein [Populus trichocarpa] gi|222855305|gb|EEE92852.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 197/303 (65%), Gaps = 21/303 (6%)
Query: 1 MAKRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFR 60
M K+ SW CT + Q+SL +A Y+ALNL QPQ S+Y G R LD YF+SV GG+R
Sbjct: 1 MEKKRSWACTFVLQVSLFIAFYLALNLDQPQTSLYNSRKG---TRTPLDVYFLSVRGGYR 57
Query: 61 PLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120
PL Q+ LLLKQME VA Y ARFV+N SELGEDDPL QNA+ LFP K+PWY+T+ SK +
Sbjct: 58 PLNQRALLLKQMEKVANIYKARFVMNISELGEDDPLTQNASRLFPPQKIPWYSTRVSKGR 117
Query: 121 EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCI 180
E GCF EQI + G+ L ++G++TG LQ + + +G LNWL LEAT W I
Sbjct: 118 EGGCFLEQINITCGKTLTVVGLDTGLLQDFMGSTSGFKNGQ--LNWLTETLEATTNSWII 175
Query: 181 VVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPG 240
V G+HP+VIC+ +E++EAK+IY LH+IFMK+GVN Y+S+ GC ++ QD + Y+
Sbjct: 176 VSGYHPVVICD--KERVEAKQIYGALHNIFMKYGVNAYISRQGCNGHTVQDGVAYIGIAD 233
Query: 241 LIE-----SGNGR---------EMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGK 286
IE S NGR + D FLLH+V SLEI TYFV+ G++V + +RGK
Sbjct: 234 SIESEPLNSSNGRLAFRNFHRDTVNDWFLLHRVGSLEITTYFVSSAGKIVNKAVIEQRGK 293
Query: 287 EVM 289
M
Sbjct: 294 VAM 296
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565017|ref|XP_002523501.1| conserved hypothetical protein [Ricinus communis] gi|223537208|gb|EEF38840.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 204/300 (68%), Gaps = 12/300 (4%)
Query: 1 MAKRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFR 60
M K+ SWVC+L+ Q+ LC+ +Y+ALNLGQPQ +Y GI+S R LD YF+SV G +R
Sbjct: 1 MEKKRSWVCSLVLQVCLCVVVYLALNLGQPQNFVYFSRGGITSTRN-LDVYFLSVRGSYR 59
Query: 61 PLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120
++QQ+ LLK ME+VAK Y +FV+N SELGEDDPL +NA+ LF S+ VPWYTT ASK +
Sbjct: 60 DIKQQSHLLKLMENVAKVYKVKFVVNISELGEDDPLTKNASRLFSSMNVPWYTTIASKGR 119
Query: 121 EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCI 180
VG +Q + G+ L I V+T S Q + S G+ LNWL LEAT W +
Sbjct: 120 GVGHPLDQNNVKDGKMLIIADVDTESRQDLMLVGSTSGIGNNQLNWLAKTLEATTSNWLV 179
Query: 181 VVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPG 240
VVG+HP+++CEE+ E++EAK++YEPLHHIFMK+GVN YLS+ GC ++ QDS+ Y+
Sbjct: 180 VVGYHPVLVCEENNEKIEAKQVYEPLHHIFMKYGVNAYLSRGGCANHTFQDSVAYIGIAD 239
Query: 241 LIESG------NG-----REMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
I+S NG +E+ GFLLH+V+SLE+ TY VTL GEVV + ++RG+E M
Sbjct: 240 PIKSEPEMASLNGSLAFQKEVEIGFLLHRVNSLEMATYSVTLTGEVVNKILVQQRGREFM 299
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297735903|emb|CBI18679.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 190/274 (69%), Gaps = 14/274 (5%)
Query: 4 RPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLE 63
+PSWV T+ITQLSLCLA+ +A NLG+P + ++ S + + LD YFISV GGFRPL
Sbjct: 3 KPSWVRTVITQLSLCLAVLLAFNLGRPWEKPMSHSS--SGSSRPLDLYFISVRGGFRPLN 60
Query: 64 QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVG 123
QQT LLKQME AK+Y+ARFVIN SELGEDDPL QN TW F +LKVPWY+T+ S+ + G
Sbjct: 61 QQTHLLKQMEKAAKTYEARFVINISELGEDDPLTQNGTWRFSTLKVPWYSTRVSRGQGTG 120
Query: 124 CFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVG 183
F +QI++P G+ LDII ++TG+ + + + +G+ L+ L LE ++ W IVVG
Sbjct: 121 YFLKQIKIPFGKTLDIISLDTGAFKDFMLMNPLNGAGNDQLHGLTKTLETSDSDWRIVVG 180
Query: 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIE 243
F L +CE + E++E ++YE LHHIF KFGV+ YLS GC Y+R+DSI Y+ NPG I+
Sbjct: 181 FCSLAVCEGNRERIEI-QLYEHLHHIFYKFGVDVYLSGEGCSDYARKDSIAYIRNPGSID 239
Query: 244 -----------SGNGREMVDGFLLHKVSSLEILT 266
SG + MV+GFLLH+VSSLEI++
Sbjct: 240 EKLPLASVNQISGFSKGMVNGFLLHRVSSLEIVS 273
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147820982|emb|CAN67945.1| hypothetical protein VITISV_025335 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 169/246 (68%), Gaps = 3/246 (1%)
Query: 4 RPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLE 63
+PSWV T+ITQLSLCLA+ +A NLG+P + ++ S + + LD YFISV GGFRPL
Sbjct: 3 KPSWVRTVITQLSLCLAVLLAFNLGRPWEK--PMSHSSSGSSRPLDLYFISVRGGFRPLN 60
Query: 64 QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVG 123
QQT LLKQME AK+Y+ARFVIN SELGEDDPL QN TW F +LKVPWY+T+ S+ G
Sbjct: 61 QQTHLLKQMEKAAKTYEARFVINISELGEDDPLTQNGTWRFSTLKVPWYSTRVSRGXGTG 120
Query: 124 CFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVG 183
F +QI++P G+ LDII ++TG+ + + + +G+ L+ L LE ++ W IVVG
Sbjct: 121 YFLKQIKIPFGKTLDIIXLDTGAFKDFMLMNPLNGAGNDQLHGLTKTLETSDSDWRIVVG 180
Query: 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIE 243
F L +CE + E++E ++YE LHHIF KFGV+ YLS GC Y+R+DSI Y+ NPG
Sbjct: 181 FCSLAVCEGNRERIEI-QLYEHLHHIFYKFGVDVYLSGEGCSDYARKDSIAYIRNPGKXX 239
Query: 244 SGNGRE 249
N E
Sbjct: 240 GVNKEE 245
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142415|ref|XP_002324553.1| predicted protein [Populus trichocarpa] gi|222865987|gb|EEF03118.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 174/290 (60%), Gaps = 38/290 (13%)
Query: 3 KRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPL 62
KR SW CT + Q+SL +A Y+ALNLGQPQKSI+Q NG SS+R+ LD YF+SV GG+RPL
Sbjct: 4 KRRSWACTFVLQVSLLIAFYLALNLGQPQKSIFQNRNGTSSSRRPLDVYFLSVRGGYRPL 63
Query: 63 EQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEV 122
+QQ LLLKQME VA Y ARFV+N SELGEDDPL QNA+ LFP KVPWY+TK S + +V
Sbjct: 64 KQQNLLLKQMEKVASFYRARFVVNVSELGEDDPLTQNASRLFPPQKVPWYSTKVSNDGKV 123
Query: 123 GCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEAT--NGQWCI 180
GCF E + + G+ L ++G++TGS Q +P S + LNWL +LEAT N Q C
Sbjct: 124 GCFLEHVNITSGKMLTVVGLDTGSFQDSMPMGSTSDFKNRQLNWLTQSLEATTDNCQGCT 183
Query: 181 VVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPG 240
++ + + HI G + + + +
Sbjct: 184 ------------------SRTVQGGVAHI-------------GIADPTGSEPLVNLNGRL 212
Query: 241 LIESGNGREMV-DGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
I+ +E++ DGFLLH+VSSLEI TYFV+ GE+V + GKEV+
Sbjct: 213 AIQ----KEVINDGFLLHRVSSLEITTYFVSSAGEIVNEAVITQHGKEVV 258
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442983|ref|XP_004139260.1| PREDICTED: uncharacterized protein LOC101208944 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 186/292 (63%), Gaps = 14/292 (4%)
Query: 5 PSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLEQ 64
PS TL+ QL LC A Y++LN+G+ + + + ++ LDFYFISV GG R +++
Sbjct: 4 PSISTTLLAQLCLCFAFYLSLNMGRSKNYDFLKI----PDQNPLDFYFISVWGGLRSVKE 59
Query: 65 QTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGC 124
+TLLLKQME +AK A+F+++ E GE+D L QN TW F SLKVPW++ +AS+ + G
Sbjct: 60 ETLLLKQMEKMAKVSHAKFILHIREPGENDRLMQNGTWYFSSLKVPWHSIRASR-GDGGH 118
Query: 125 FQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLL--LNWLKSALEATNGQWCIVV 182
F E+ +L +G+ LDII ++T LQ P A+ SAS L L WLK L+A++ W IVV
Sbjct: 119 FIERTKLQYGQTLDIIAIDTALLQE--PIAMGSASQALKSHLLWLKRTLQASSSNWRIVV 176
Query: 183 GFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLI 242
GFHPL+ CE + LE K ++E +H IF++ GVN YLS+ GC R SI Y+ PG I
Sbjct: 177 GFHPLLTCENNTRSLETKHLFESVHRIFVENGVNAYLSRRGCTYNVRIGSIAYIGIPGRI 236
Query: 243 -----ESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
+ + FLL VSSLE++ Y+V EG+VV++T +++G+EV+
Sbjct: 237 PIQKTHFQSRKSSFREFLLQHVSSLEMVFYYVNTEGDVVHKTELQQKGREVI 288
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449493689|ref|XP_004159413.1| PREDICTED: uncharacterized protein LOC101230039 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 186/292 (63%), Gaps = 14/292 (4%)
Query: 5 PSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLEQ 64
PS TL+ QL LC A Y++LN+G+ + + + ++ LDFYFISV GG R +++
Sbjct: 4 PSISTTLLAQLCLCFAFYLSLNMGRSKNYDFLKI----PDQNPLDFYFISVWGGLRSVKE 59
Query: 65 QTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGC 124
+TLLLKQME +AK A+F+++ E GE+D L QN TW F SLKVPW++ +AS+ + G
Sbjct: 60 ETLLLKQMEKMAKVSHAKFILHIREPGENDRLMQNGTWYFSSLKVPWHSIRASR-GDGGH 118
Query: 125 FQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLL--LNWLKSALEATNGQWCIVV 182
F E+ +L +G+ LDII ++T LQ P A+ SAS L L WLK L+A++ W IVV
Sbjct: 119 FIERTKLQYGQTLDIIAIDTALLQE--PIAMGSASQALKSHLLWLKRTLQASSSNWRIVV 176
Query: 183 GFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLI 242
GFHPL+ CE + LE K ++E +H IF++ GVN YLS+ GC R SI Y+ PG I
Sbjct: 177 GFHPLLTCENNTRSLETKHLFESVHRIFVENGVNAYLSRRGCTYNVRIGSIAYIGIPGRI 236
Query: 243 -----ESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
+ + FLL VSSLE++ Y+V EG+VV++T +++G+EV+
Sbjct: 237 PIQKTHLQSRKSSFREFLLQHVSSLEMVFYYVNTEGDVVHKTELQQKGREVI 288
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|125554322|gb|EAY99927.1| hypothetical protein OsI_21928 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 174/284 (61%), Gaps = 12/284 (4%)
Query: 2 AKRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLD------FYFISV 55
+KRP W T+ Q++LC+A+Y A +LG+P+ + G LD F+SV
Sbjct: 9 SKRPPWSRTVAVQVALCVAMYAAFSLGEPRLHRNRGRGGGGGVEASLDRGGRGGVSFLSV 68
Query: 56 TGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTK 115
GG RP +Q LL+QME +AK+Y +FV++ ++LGE+DPL QN + F +LK+PWY+T
Sbjct: 69 AGGARPAAEQARLLRQMESIAKAYKVKFVVDVAQLGEEDPLWQNGSLYFQALKIPWYSTT 128
Query: 116 ASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN 175
+S + +G F +++ +P+ ++L+IIG++TGSLQ I AS + WL+ ++ AT+
Sbjct: 129 SSHGQIIGNFLKRVMMPYDQSLEIIGMDTGSLQEPIHDGKIRASSREQIKWLEQSIAATS 188
Query: 176 GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQD-SIT 234
W IVVG+ P +C E LE K+YEPL IF K+GVN Y+S G Y RQD S+
Sbjct: 189 SNWKIVVGYDPFFVCAE-AHTLETTKLYEPLQRIFAKYGVNAYISTGGHCGYFRQDNSML 247
Query: 235 YMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYR 278
Y+ NP S + DGFLLH V+ LE+ + + LEG+VV R
Sbjct: 248 YIGNP----SPDDLTSSDGFLLHIVNLLEMESLLINLEGKVVER 287
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|55771378|dbj|BAD72545.1| unknown protein [Oryza sativa Japonica Group] gi|55773903|dbj|BAD72508.1| unknown protein [Oryza sativa Japonica Group] gi|215768936|dbj|BAH01165.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 176/289 (60%), Gaps = 22/289 (7%)
Query: 2 AKRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGIS-----------SNRKGLDF 50
+KRP W T+ Q++LC+A+Y A +LG+P+ + R G R G+ F
Sbjct: 9 SKRPPWSRTVAVQVALCVAMYAAFSLGEPR---FHRNRGRGGGGGVEASLGRGGRGGVSF 65
Query: 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVP 110
+SV GG RP +Q LL+QME +AK+Y +FV++ ++LGE+DPL QN + F +LK+P
Sbjct: 66 --LSVAGGARPAAEQARLLRQMESIAKAYKVKFVVDVAQLGEEDPLWQNGSLYFQALKIP 123
Query: 111 WYTTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSA 170
WY+T +S + +G F +++ +P+ ++L+IIG++TGSLQ I AS + WL+ +
Sbjct: 124 WYSTTSSHGQIIGNFLKRVMMPYDQSLEIIGMDTGSLQEPIHDGKIRASSREQIKWLEQS 183
Query: 171 LEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQ 230
+ AT+ W IVVG+ P +C E LE K+YEPL IF K+GVN Y+S G Y RQ
Sbjct: 184 IAATSSNWKIVVGYDPFFVCAE-AHTLETTKLYEPLQRIFAKYGVNAYISTGGHCGYFRQ 242
Query: 231 D-SITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYR 278
D S+ Y+ NP S + DGFLLH V+ LE+ + + LEG+VV R
Sbjct: 243 DNSMLYIGNP----SPDDLTSSDGFLLHIVNLLEMESLLINLEGKVVER 287
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 289 | ||||||
| TAIR|locus:505006537 | 285 | AT4G30993 "AT4G30993" [Arabido | 0.965 | 0.978 | 0.421 | 8.9e-54 |
| TAIR|locus:505006537 AT4G30993 "AT4G30993" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 123/292 (42%), Positives = 175/292 (59%)
Query: 3 KRPSWVCTLITQLSLCLALYVALNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPL 62
K+ SW CT+ QLSLCL +YV+L+ G P + +G N LD +FISV GGFRPL
Sbjct: 2 KQSSWGCTIFIQLSLCLIIYVSLHSGHP--FFFSSDDG--DNATPLDLHFISVAGGFRPL 57
Query: 63 EQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEV 122
QT LL+ ME VA++Y A+FV+++SE GE+DP QNAT L SLK+PWYT + K
Sbjct: 58 NHQTRLLRLMEKVAETYKAKFVVSSSEQGEEDPFLQNATRLSSSLKLPWYT----RMKGS 113
Query: 123 GCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVV 182
G F+E I++P G +LD++ V+TGSL+ ++ +A L L L+A +G W IVV
Sbjct: 114 GYFREHIKMPFGGSLDVVFVDTGSLKQEVLGGAVNAYMISQLKGLTRILKAVDGDWRIVV 173
Query: 183 GFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLI 242
G PL+ +E E K++ H I K+GVN Y+S+ GC + +S+T + P
Sbjct: 174 GSDPLLAYTLTKEPEEPKRVARTFHQIMTKYGVNLYISEKGCTRGGSNESLTCITVPNQQ 233
Query: 243 ES-----GNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGKEVM 289
E+ + RE DGFLLH+VS E +TY + GEV+ +++GKE +
Sbjct: 234 ENQGPTNNSKREREDGFLLHRVSFSEFVTYTINSSGEVIDTKLVKQKGKETI 285
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 289 289 0.00088 115 3 11 22 0.38 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 616 (65 KB)
Total size of DFA: 216 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.48u 0.10s 22.58t Elapsed: 00:00:01
Total cpu time: 22.48u 0.10s 22.58t Elapsed: 00:00:01
Start: Sat May 11 03:16:34 2013 End: Sat May 11 03:16:35 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.2 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 289 | |||
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 8e-05 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 51/205 (24%), Positives = 69/205 (33%), Gaps = 55/205 (26%)
Query: 63 EQQTLLLKQMEDVAKSYDARFVINTSELG----------EDDPLKQNATWLF------PS 106
Q + K M VA F+++ LG DDP + F PS
Sbjct: 15 AGQKAVAKAMAKVAAELGPDFILS---LGDNFYDDGVGSVDDPRFET---TFEDVYSAPS 68
Query: 107 LKVPWYTTKASKEKEVGCFQEQI-----------RLPH------------GEALDIIGVN 143
L+VPWY G QI +P ++ I ++
Sbjct: 69 LQVPWYLV-LGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMID 127
Query: 144 TGSLQGKI-----PTALPSAS-GDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQL 197
T L G P P+ + L WL+ L A+ W IVVG HP+ EH
Sbjct: 128 TVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAASTADWKIVVGHHPIYSSGEHGPTS 187
Query: 198 EAKKIYEPLHHIFMKFGVNTYLSKH 222
PL K+ V+ YLS H
Sbjct: 188 CLVDRLLPL---LKKYKVDAYLSGH 209
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| PLN02533 | 427 | probable purple acid phosphatase | 99.97 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.97 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.96 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.96 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 99.95 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.92 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.89 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.83 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.82 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.82 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.82 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.82 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.81 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.81 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.75 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.75 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.73 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.73 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.71 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.71 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.7 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.61 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.59 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.58 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.53 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.49 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.48 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.44 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.43 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.42 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.38 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.37 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.33 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.3 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.29 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.28 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.27 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.19 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 99.18 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.17 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.11 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.1 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.06 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.06 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.04 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.01 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.98 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.98 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.92 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.78 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.78 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.78 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.69 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.68 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.68 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.67 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.66 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.65 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.51 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.5 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.43 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.34 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.33 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.32 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.25 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.2 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 98.18 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.17 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.16 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.16 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.16 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.15 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 98.12 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.05 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.02 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.98 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.96 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.94 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.86 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.75 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.75 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.72 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.64 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 97.63 | |
| PHA02239 | 235 | putative protein phosphatase | 97.62 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.62 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.56 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.54 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.52 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.46 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.34 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 97.34 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 97.31 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.26 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 97.16 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.98 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.94 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.92 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.89 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.83 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.81 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.74 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.58 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 95.88 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.57 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 95.48 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.29 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 94.86 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.45 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.98 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 93.53 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 93.04 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.92 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 92.77 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 91.95 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 91.24 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 90.95 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 90.48 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 89.54 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 89.4 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.37 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 88.07 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 84.61 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 83.73 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 83.24 | |
| KOG2476 | 528 | consensus Uncharacterized conserved protein [Funct | 81.1 |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=309.56 Aligned_cols=237 Identities=26% Similarity=0.400 Sum_probs=202.9
Q ss_pred CCCccEEEEEEeC-CCCCChhHHHHHHHHHHHHhhCCccEEEEcCCC-------CCCChhhhhhhc-cC--CCCCCCeEE
Q 022941 45 RKGLDFYFISVTG-GFRPLEQQTLLLKQMEDVAKSYDARFVINTSEL-------GEDDPLKQNATW-LF--PSLKVPWYT 113 (289)
Q Consensus 45 ~~~~~~~f~~~gD-~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~-------~~~~~~~~~~~~-~~--~~l~~P~~~ 113 (289)
..+++++|+++|| |.+|..+|..++.+|.++.++.+.||||.+||+ +.+|++++..|+ +| ++|+.|||.
T Consensus 39 ~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~ 118 (336)
T KOG2679|consen 39 KSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYS 118 (336)
T ss_pred CCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhh
Confidence 4689999999999 888889999999999999999999999999995 356888988874 55 779999999
Q ss_pred ecCCCcCCCCceeEe-----------EeCCC-----CCeEEEEEEcCCCccCCCCC------------CCCCCcHHHHHH
Q 022941 114 TKASKEKEVGCFQEQ-----------IRLPH-----GEALDIIGVNTGSLQGKIPT------------ALPSASGDLLLN 165 (289)
Q Consensus 114 v~GNHD~~~~~~~~~-----------~~~p~-----~~~~~~i~lDt~~~~~~~~~------------~~~~~~~~~Ql~ 165 (289)
|.|||| |+|+.+++ |..|. .+.+.+.++|+.++...+.. .|+......+++
T Consensus 119 vlGNHD-yrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~ 197 (336)
T KOG2679|consen 119 VLGNHD-YRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVKYLRALLS 197 (336)
T ss_pred hccCcc-ccCchhhhhhHHHHhhccceecccHHhhcceeeeeeccccccchhhheecccccccccccCChHHHHHHHHHH
Confidence 999999 99987554 44442 34577888888877643211 133356778999
Q ss_pred HHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCcc-ce--ecCCCeEEEecCCCC
Q 022941 166 WLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCI-KY--SRQDSITYMENPGLI 242 (289)
Q Consensus 166 WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~-~~--~~~~gi~~i~~g~~~ 242 (289)
||+..|+++.++|+||++|||+.+.+.| +++.++.++|+|||++++||+|+|||+|. |+ ...++|+|+++|+|+
T Consensus 198 ~le~~L~~S~a~wkiVvGHh~i~S~~~H---G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~~e~~iqf~tSGagS 274 (336)
T KOG2679|consen 198 WLEVALKASRAKWKIVVGHHPIKSAGHH---GPTKELEKQLLPILEANGVDLYINGHDHCLQHISSPESGIQFVTSGAGS 274 (336)
T ss_pred HHHHHHHHhhcceEEEecccceehhhcc---CChHHHHHHHHHHHHhcCCcEEEecchhhhhhccCCCCCeeEEeeCCcc
Confidence 9999999999999999999999999988 78899999999999999999999999999 77 457899999999999
Q ss_pred CCCCC--------------cccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEEEecCC
Q 022941 243 ESGNG--------------REMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERG 285 (289)
Q Consensus 243 ~~~~g--------------~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~i~~~~ 285 (289)
+.|.| .....||+-++++..++++.||+..|++++.+...|+.
T Consensus 275 kaw~g~~~~~~~~p~~lkF~YdgqGfmsv~is~~e~~vvfyD~~G~~Lhk~~t~kr~ 331 (336)
T KOG2679|consen 275 KAWRGTDHNPEVNPKELKFYYDGQGFMSVEISHSEARVVFYDVSGKVLHKWSTSKRS 331 (336)
T ss_pred cccCCCccCCccChhheEEeeCCCceEEEEEecceeEEEEEeccCceEEEeeccccc
Confidence 98755 24567999999999999999999999999999988775
|
|
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-44 Score=323.96 Aligned_cols=237 Identities=19% Similarity=0.233 Sum_probs=195.6
Q ss_pred CCCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCC------CCCChhhhhhhc-cC--CC--CCCCeE
Q 022941 44 NRKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSEL------GEDDPLKQNATW-LF--PS--LKVPWY 112 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~------~~~~~~~~~~~~-~~--~~--l~~P~~ 112 (289)
...+++++|+++||.+.|...|..++++|.+++++.++||||.+||+ +.+|++|++.|+ +| +. |++|||
T Consensus 21 ~~~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy 100 (394)
T PTZ00422 21 YSVKAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFF 100 (394)
T ss_pred cccCCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeE
Confidence 34578999999999557889999999999999999999999999996 346789998875 55 34 899999
Q ss_pred EecCCCcCCCCcee----------------------------EeEeCCC-----------------------CCeEEEEE
Q 022941 113 TTKASKEKEVGCFQ----------------------------EQIRLPH-----------------------GEALDIIG 141 (289)
Q Consensus 113 ~v~GNHD~~~~~~~----------------------------~~~~~p~-----------------------~~~~~~i~ 141 (289)
+|+|||| |+|+.. .+|.||+ +..+.|++
T Consensus 101 ~vLGNHD-y~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fif 179 (394)
T PTZ00422 101 TVLGQAD-WDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIF 179 (394)
T ss_pred EeCCccc-ccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEE
Confidence 9999999 765531 3566664 12379999
Q ss_pred EcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhc--CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEE
Q 022941 142 VNTGSLQGKIPTALPSASGDLLLNWLKSALEAT--NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYL 219 (289)
Q Consensus 142 lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~--~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl 219 (289)
+||+++...++ ......+|++||+++|+.+ .++|+||++|||+|+.+.+ ++..++++.|.|+|++|+||+||
T Consensus 180 iDT~~l~~~~~---~~~~~~~~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~h---g~~~~L~~~L~PLL~ky~VdlYi 253 (394)
T PTZ00422 180 IDTWILSSSFP---YKKVSERAWQDLKATLEYAPKIADYIIVVGDKPIYSSGSS---KGDSYLSYYLLPLLKDAQVDLYI 253 (394)
T ss_pred EECchhcccCC---ccccCHHHHHHHHHHHHhhccCCCeEEEEecCceeecCCC---CCCHHHHHHHHHHHHHcCcCEEE
Confidence 99998875442 2234578999999999644 3679999999999999986 34456888999999999999999
Q ss_pred eCCCccce-ecCCCeEEEecCCCCCCCCC----------cccCCcEEEEEEeCcEEEEEEEc-CCCcEEEEEEEecCCcc
Q 022941 220 SKHGCIKY-SRQDSITYMENPGLIESGNG----------REMVDGFLLHKVSSLEILTYFVT-LEGEVVYRTATRERGKE 287 (289)
Q Consensus 220 ~GH~H~~~-~~~~gi~~i~~g~~~~~~~g----------~~~~~gf~~v~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~~ 287 (289)
|||+|.++ ...+++.||++|+|+..+.+ ....+||+.++++.+++++++++ .+|++++++++.++.|+
T Consensus 254 sGHDH~lq~i~~~gt~yIvSGaGs~~~~~~~~~~~~s~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~~~ 333 (394)
T PTZ00422 254 SGYDRNMEVLTDEGTAHINCGSGGNSGRKSIMKNSKSLFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKKRK 333 (394)
T ss_pred EccccceEEecCCCceEEEeCccccccCCCCCCCCCcceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccchh
Confidence 99999955 55679999999998876421 34579999999999999999997 79999999999998876
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=253.42 Aligned_cols=220 Identities=21% Similarity=0.359 Sum_probs=166.0
Q ss_pred EEEEEEeCCCC-CChhHHHHHHHHHHHHhhCCccEEEEcCCCCCC-------Chhhhhhh-ccCCC--CCCCeEEecCCC
Q 022941 50 FYFISVTGGFR-PLEQQTLLLKQMEDVAKSYDARFVINTSELGED-------DPLKQNAT-WLFPS--LKVPWYTTKASK 118 (289)
Q Consensus 50 ~~f~~~gD~~~-g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~-------~~~~~~~~-~~~~~--l~~P~~~v~GNH 118 (289)
++|+++||.+. +...+..+++.|.+++++.+|||||++||+... +..|.+.+ +.+.. +++|+|++||||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 58999999444 467888999999988888899999999997421 23444443 33433 589999999999
Q ss_pred cCCCCceeE-----------eEeCCC------------CCeEEEEEEcCCCccCCCC------CCCCCCcHHHHHHHHHH
Q 022941 119 EKEVGCFQE-----------QIRLPH------------GEALDIIGVNTGSLQGKIP------TALPSASGDLLLNWLKS 169 (289)
Q Consensus 119 D~~~~~~~~-----------~~~~p~------------~~~~~~i~lDt~~~~~~~~------~~~~~~~~~~Ql~WL~~ 169 (289)
| +.+++.+ +|.+|. +++++||+|||......+. ....+.+..+|++||++
T Consensus 81 D-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~ 159 (277)
T cd07378 81 D-YSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEK 159 (277)
T ss_pred c-cCCCchheeehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHHHHHHHHH
Confidence 9 5443311 122332 2379999999997653221 11234688999999999
Q ss_pred HHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecC--CCeEEEecCCCCCCCC
Q 022941 170 ALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQ--DSITYMENPGLIESGN 246 (289)
Q Consensus 170 ~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~--~gi~~i~~g~~~~~~~ 246 (289)
+|++++++|+||++|||+++.+... .....++.|.+++++++|+++||||.|.+. ... .++.|+++|+++..+.
T Consensus 160 ~L~~~~~~~~iv~~H~P~~~~~~~~---~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~~~~~~~ 236 (277)
T cd07378 160 TLAASTADWKIVVGHHPIYSSGEHG---PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARP 236 (277)
T ss_pred HHHhcCCCeEEEEeCccceeCCCCC---CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcEEEEeCCCcccCC
Confidence 9999888899999999999876542 224567899999999999999999999965 333 4999999998776521
Q ss_pred C--------------cccCCcEEEEEEeCcEEEEEEEcCCC
Q 022941 247 G--------------REMVDGFLLHKVSSLEILTYFVTLEG 273 (289)
Q Consensus 247 g--------------~~~~~gf~~v~v~~~~i~~~~~~~~g 273 (289)
+ .....||.+++|+++++++++++.+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~~l~~~~~~~~g 277 (277)
T cd07378 237 SVKHIDKVPQFFSGFTSSGGGFAYLELTKEELTVRFYDADG 277 (277)
T ss_pred CCCccCcccccccccccCCCCEEEEEEecCEEEEEEECCCC
Confidence 1 23569999999999999999999887
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=254.45 Aligned_cols=228 Identities=18% Similarity=0.194 Sum_probs=163.1
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-----hhhhhhhccCCCC--CCCeEEecCCCc
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-----PLKQNATWLFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~~~~~~l--~~P~~~v~GNHD 119 (289)
..++||+++||.+.+......+.+.+.+. ..+|||||++||+..++ .+|..+++.+..+ .+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 46899999999554322233333333221 47899999999986322 3566555555443 789999999999
Q ss_pred CCCCce----eEe----E--------------eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCC-
Q 022941 120 KEVGCF----QEQ----I--------------RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNG- 176 (289)
Q Consensus 120 ~~~~~~----~~~----~--------------~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~- 176 (289)
+.... ... + ..-+.++++||+|||..... .+....+|++||+++|+++++
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~------~~~~~~~q~~WL~~~L~~~~~~ 152 (294)
T cd00839 80 -ADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFY------GDGPGSPQYDWLEADLAKVDRS 152 (294)
T ss_pred -cccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccc------cCCCCcHHHHHHHHHHHHhccc
Confidence 33221 110 0 01123679999999975331 235678999999999998754
Q ss_pred --CeEEEEeeccccccccccch-hhHHhhHHHHHHHHHHhCCeEEEeCCCcccee--c---------------CCCeEEE
Q 022941 177 --QWCIVVGFHPLVICEEHEEQ-LEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYS--R---------------QDSITYM 236 (289)
Q Consensus 177 --~~~iV~~HhP~~~~~~~~~~-~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~--~---------------~~gi~~i 236 (289)
+|+||++|||+++.+..... ......++.|.++|++|+|+++||||.|.+.+ . .+|+.||
T Consensus 153 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yi 232 (294)
T cd00839 153 KTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHI 232 (294)
T ss_pred CCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEE
Confidence 68999999999987654211 12345678999999999999999999999762 1 2689999
Q ss_pred ecCCCCCCCC---------C----cccCCcEEEEEEeCc-EEEEEEEc-CCCcEEEEEEEec
Q 022941 237 ENPGLIESGN---------G----REMVDGFLLHKVSSL-EILTYFVT-LEGEVVYRTATRE 283 (289)
Q Consensus 237 ~~g~~~~~~~---------g----~~~~~gf~~v~v~~~-~i~~~~~~-~~g~~~~~~~i~~ 283 (289)
++|+++.... . ....+||.++++.++ .+.+++++ .+|+++|+++|.|
T Consensus 233 v~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 233 VIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred EECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 9988765411 0 346799999999887 89999997 5799999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=230.25 Aligned_cols=219 Identities=17% Similarity=0.181 Sum_probs=150.5
Q ss_pred CccEEEEEEeCCCCCChh------------HHHHHHHHHHHHhhC--CccEEEEcCCCCCCCh-------hhhhhhccCC
Q 022941 47 GLDFYFISVTGGFRPLEQ------------QTLLLKQMEDVAKSY--DARFVINTSELGEDDP-------LKQNATWLFP 105 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~------------~~~~~~~l~~~~~~~--~pdfvv~~GD~~~~~~-------~~~~~~~~~~ 105 (289)
.++++|+++||.|.|... .....+.+.+..++. +||||+++||+..... +++...+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 478999999997766311 112223333333344 8999999999865322 2222234455
Q ss_pred CC--CCCeEEecCCCcCCCCc-------eeEeE----eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHh
Q 022941 106 SL--KVPWYTTKASKEKEVGC-------FQEQI----RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALE 172 (289)
Q Consensus 106 ~l--~~P~~~v~GNHD~~~~~-------~~~~~----~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~ 172 (289)
.+ ++|+++++||||..... +...| .....++++||+|||..+... .....+..+|++||+++|+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~g~~~y~~~~~~~~~i~lds~~~~~~---~~~~~~~~~ql~WL~~~L~ 158 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVFGDDYFSFWVGGVFFIVLNSQLFFDP---SEVPELAQAQDVWLEEQLE 158 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChhHHHHHHHHhCCcceEEEECCEEEEEeccccccCc---cccccchHHHHHHHHHHHH
Confidence 44 78999999999932111 11111 111236799999999754321 1112577899999999999
Q ss_pred hcC---CCeEEEEeeccccccccccch---hhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCC
Q 022941 173 ATN---GQWCIVVGFHPLVICEEHEEQ---LEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESG 245 (289)
Q Consensus 173 ~~~---~~~~iV~~HhP~~~~~~~~~~---~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~ 245 (289)
+++ .+++||++|||++........ ......+++|.++|++++|+++||||.|.+. ...+|++++++++++.++
T Consensus 159 ~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~~~g~~~~~~~~~~~~~ 238 (262)
T cd07395 159 IAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGRYGGLEMVVTSAIGAQL 238 (262)
T ss_pred HHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceEECCEEEEEcCceeccc
Confidence 874 569999999999865432110 1123457889999999999999999999965 556799999888876543
Q ss_pred CCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 246 NGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 246 ~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
....+||++++++++++++++|.
T Consensus 239 --~~~~~g~~~~~v~~~~~~~~~~~ 261 (262)
T cd07395 239 --GNDKSGLRIVKVTEDKIVHEYYS 261 (262)
T ss_pred --CCCCCCcEEEEECCCceeeeeee
Confidence 34679999999999999999885
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=240.37 Aligned_cols=223 Identities=16% Similarity=0.156 Sum_probs=159.0
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC---hhhhhhhccCCCC--CCCeEEecCCCcCC
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD---PLKQNATWLFPSL--KVPWYTTKASKEKE 121 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~---~~~~~~~~~~~~l--~~P~~~v~GNHD~~ 121 (289)
..+++|+++||.+..... .. .+..+ ++.+|||||++||+...+ ..|..+++.+..+ .+|+++++|||| .
T Consensus 137 ~~~~~f~v~GDlG~~~~~-~~---tl~~i-~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE-~ 210 (427)
T PLN02533 137 KFPIKFAVSGDLGTSEWT-KS---TLEHV-SKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHE-L 210 (427)
T ss_pred CCCeEEEEEEeCCCCccc-HH---HHHHH-HhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCcccc-c
Confidence 468999999994332211 11 22222 346899999999997533 3566655554443 689999999999 4
Q ss_pred CC----------ceeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC--
Q 022941 122 VG----------CFQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN-- 175 (289)
Q Consensus 122 ~~----------~~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-- 175 (289)
.. .+..+|.+|. .++++||+|||.... ....+|++||+++|++.+
T Consensus 211 ~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~---------~~~~~Q~~WLe~dL~~~~r~ 281 (427)
T PLN02533 211 EKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDF---------EPGSEQYQWLENNLKKIDRK 281 (427)
T ss_pred cccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccc---------cCchHHHHHHHHHHHhhccc
Confidence 31 1345676662 367899999996311 245799999999999764
Q ss_pred -CCeEEEEeeccccccccc-cchhhHHhhHHHHHHHHHHhCCeEEEeCCCcccee---------cCCCeEEEecCCCCCC
Q 022941 176 -GQWCIVVGFHPLVICEEH-EEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYS---------RQDSITYMENPGLIES 244 (289)
Q Consensus 176 -~~~~iV~~HhP~~~~~~~-~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~---------~~~gi~~i~~g~~~~~ 244 (289)
.+|+||++|||+|+.+.. ........+++.|.++|.+++||++||||.|.|++ ...|+.||++|+++..
T Consensus 282 ~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~ 361 (427)
T PLN02533 282 TTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNR 361 (427)
T ss_pred CCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccc
Confidence 359999999999987542 11112345678999999999999999999999773 1357889999887543
Q ss_pred -------------CCC-cccCCcEEEEEE-eCcEEEEEEEc-CCC--cEEEEEEEecC
Q 022941 245 -------------GNG-REMVDGFLLHKV-SSLEILTYFVT-LEG--EVVYRTATRER 284 (289)
Q Consensus 245 -------------~~g-~~~~~gf~~v~v-~~~~i~~~~~~-~~g--~~~~~~~i~~~ 284 (289)
|+. +...+||.++++ +...+.++++. .+| .+.|++.|.|-
T Consensus 362 e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~ 419 (427)
T PLN02533 362 EGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSL 419 (427)
T ss_pred cccccccCCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEec
Confidence 111 456899999997 56689999986 444 37899998763
|
|
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=222.23 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=153.2
Q ss_pred CCCccEEEEEEeCCCCCC---------hhHHHHHHHHHHHHhh-CCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeE
Q 022941 45 RKGLDFYFISVTGGFRPL---------EQQTLLLKQMEDVAKS-YDARFVINTSELGEDDP--LKQNATWLFPSLKVPWY 112 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~---------~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~ 112 (289)
...++++|++++|.|... .....+.+.+..+.+. .+|||||++||+..+.. .|+...+.+..+++|+|
T Consensus 10 ~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~~Pv~ 89 (275)
T PRK11148 10 AGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSSEAYQHFAEGIAPLRKPCV 89 (275)
T ss_pred CCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCHHHHHHHHHHHhhcCCcEE
Confidence 445789999999977421 1123344445554433 57999999999976432 44444456777899999
Q ss_pred EecCCCcCCCCceeE-----eEe----CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEe
Q 022941 113 TTKASKEKEVGCFQE-----QIR----LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVG 183 (289)
Q Consensus 113 ~v~GNHD~~~~~~~~-----~~~----~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~ 183 (289)
.+||||| ....+.+ .+. ...++++++|+|||.... .+.+.++.+|++||+++|++.++++++|++
T Consensus 90 ~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Lds~~~g-----~~~G~l~~~ql~wL~~~L~~~~~~~~vv~~ 163 (275)
T PRK11148 90 WLPGNHD-FQPAMYSALQDAGISPAKHVLIGEHWQILLLDSQVFG-----VPHGELSEYQLEWLERKLADAPERHTLVLL 163 (275)
T ss_pred EeCCCCC-ChHHHHHHHhhcCCCccceEEecCCEEEEEecCCCCC-----CcCCEeCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 9999999 4322111 110 112456899999997432 123568899999999999988777888888
Q ss_pred eccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC-------cccCCcE
Q 022941 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG-------REMVDGF 254 (289)
Q Consensus 184 HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g-------~~~~~gf 254 (289)
||||...+............++|.+++++| +|+++||||.|... ...+|+.++++++.+.++.. ....+||
T Consensus 164 hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~~~gi~~~~~ps~~~q~~~~~~~~~~~~~~~g~ 243 (275)
T PRK11148 164 HHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLDWNGRRLLATPSTCVQFKPHCTNFTLDTVAPGW 243 (275)
T ss_pred cCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhceECCEEEEEcCCCcCCcCCCCCccccccCCCcE
Confidence 887765543210011122356899999998 89999999999955 56689999999988765311 2456899
Q ss_pred EEEEEeCc-EEEEEEEcCCC
Q 022941 255 LLHKVSSL-EILTYFVTLEG 273 (289)
Q Consensus 255 ~~v~v~~~-~i~~~~~~~~g 273 (289)
+++++.++ ++..+....++
T Consensus 244 ~~~~l~~~g~~~~~~~~~~~ 263 (275)
T PRK11148 244 RELELHADGSLETEVHRLAD 263 (275)
T ss_pred EEEEEcCCCcEEEEEEEcCC
Confidence 99999755 57777766544
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-28 Score=212.44 Aligned_cols=210 Identities=15% Similarity=0.156 Sum_probs=144.7
Q ss_pred EEEEEEeCCCCCCh---------hH-HHHHHHHHHHHhhCCccEEEEcCCCCCCC-----hhhhhhhccCCCCCCCeEEe
Q 022941 50 FYFISVTGGFRPLE---------QQ-TLLLKQMEDVAKSYDARFVINTSELGEDD-----PLKQNATWLFPSLKVPWYTT 114 (289)
Q Consensus 50 ~~f~~~gD~~~g~~---------~~-~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~~~~~~l~~P~~~v 114 (289)
|||++++|.|.+.. .. ..+.+++.. +++.+|||||++||+.... ..|+...+.++.+++|++++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~-i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v 79 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEE-WNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHV 79 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHH-HHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEe
Confidence 69999999774431 11 223333444 3456799999999986432 23443445567788999999
Q ss_pred cCCCcCCCCceeEe------------EeCCCCCeEEEEEEcCCCccCC-C------------------------CCCCCC
Q 022941 115 KASKEKEVGCFQEQ------------IRLPHGEALDIIGVNTGSLQGK-I------------------------PTALPS 157 (289)
Q Consensus 115 ~GNHD~~~~~~~~~------------~~~p~~~~~~~i~lDt~~~~~~-~------------------------~~~~~~ 157 (289)
||||| ........ +..-..++++||++|+...... . +....+
T Consensus 80 ~GNHD-~~~~~~~~~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 158 (267)
T cd07396 80 LGNHD-LYNPSREYLLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLYLSEPRFVDWNG 158 (267)
T ss_pred cCccc-cccccHhhhhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhhccCccceeccC
Confidence 99999 33221100 1111245799999999653210 0 000124
Q ss_pred CcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCe
Q 022941 158 ASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSI 233 (289)
Q Consensus 158 ~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi 233 (289)
.+.++|++||+++|++++ .+++||++|||++..... ........+++.++++++ +|+++||||.|... ...+|+
T Consensus 159 ~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~--~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~~gi 236 (267)
T cd07396 159 GIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTS--PHGLLWNHEEVLSILRAYGCVKACISGHDHEGGYAQRHGI 236 (267)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCC--ccccccCHHHHHHHHHhCCCEEEEEcCCcCCCCccccCCe
Confidence 678999999999999764 358999999999765531 011122356789999996 89999999999966 667899
Q ss_pred EEEecCCCCCCCCCcccCCcEEEEEEeCcEEEE
Q 022941 234 TYMENPGLIESGNGREMVDGFLLHKVSSLEILT 266 (289)
Q Consensus 234 ~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~ 266 (289)
.|+++|+.+.+ ....+-|.++.+.+|++.+
T Consensus 237 ~~~~~~a~~~~---~~~~~~~~~~~~~~~~~~~ 266 (267)
T cd07396 237 HFLTLEGMVET---PPESNAFGVVIVYEDRLIL 266 (267)
T ss_pred eEEEechhhcC---CCCCCceEEEEEeCCceee
Confidence 99999998876 4567889999999988654
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=209.81 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=144.4
Q ss_pred EEEEEeCCCCCChh--------HHHHHHHHHHHHhhC--CccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCC
Q 022941 51 YFISVTGGFRPLEQ--------QTLLLKQMEDVAKSY--DARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 51 ~f~~~gD~~~g~~~--------~~~~~~~l~~~~~~~--~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
||++++|.|.+... .....+.+.+..++. +|||||++||+..... .|+...+.+..+++|++.++|||
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~~p~~~v~GNH 80 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAALPIPVYLLPGNH 80 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 69999997776421 122233333333343 8999999999875432 44444456677799999999999
Q ss_pred cCCCCceeEeE-----------eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccc
Q 022941 119 EKEVGCFQEQI-----------RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPL 187 (289)
Q Consensus 119 D~~~~~~~~~~-----------~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~ 187 (289)
| ....+.+.+ ..-..++++|+++|+..... ..+.+.++|++||++.|++..++++|+++|||+
T Consensus 81 D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~-----~~~~~~~~ql~wL~~~L~~~~~~~~il~~H~pp 154 (240)
T cd07402 81 D-DRAAMRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQ-----HGGELCAAQLDWLEAALAEAPDKPTLVFLHHPP 154 (240)
T ss_pred C-CHHHHHHhhccccccccccceeEecCCEEEEEEeCCCCCC-----cCCEECHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 9 432211111 01123579999999975321 223578899999999999988789999999999
Q ss_pred cccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCC--CC-----cccCCcEEEEE
Q 022941 188 VICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESG--NG-----REMVDGFLLHK 258 (289)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~--~g-----~~~~~gf~~v~ 258 (289)
+...............+++.++++++ +|+++||||.|... ...+|++++++|+.+.++ .. ....+||+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (240)
T cd07402 155 FPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGSWGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRALS 234 (240)
T ss_pred ccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeEECCEEEEEcCcceeeecCCCCcccccccCCCCcEEE
Confidence 87643211111122367899999999 99999999999955 667899999999988763 11 34577999998
Q ss_pred EeCcE
Q 022941 259 VSSLE 263 (289)
Q Consensus 259 v~~~~ 263 (289)
+.+++
T Consensus 235 ~~~~~ 239 (240)
T cd07402 235 LHEDG 239 (240)
T ss_pred EecCC
Confidence 86654
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=209.21 Aligned_cols=229 Identities=15% Similarity=0.141 Sum_probs=164.6
Q ss_pred CCccEEEEEEeC-CCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC----hhhhhhhccCCCC--CCCeEEecCCC
Q 022941 46 KGLDFYFISVTG-GFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD----PLKQNATWLFPSL--KVPWYTTKASK 118 (289)
Q Consensus 46 ~~~~~~f~~~gD-~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~----~~~~~~~~~~~~l--~~P~~~v~GNH 118 (289)
...+.+|+++|| |..... ..... .+.+..++|+|++.||++.++ ..|.++.+.++.+ .+|++++.|||
T Consensus 144 ~~~~~~~~i~GDlG~~~~~--~s~~~---~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNH 218 (452)
T KOG1378|consen 144 QDSPTRAAIFGDMGCTEPY--TSTLR---NQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNH 218 (452)
T ss_pred ccCceeEEEEccccccccc--cchHh---HHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccc
Confidence 458999999999 432111 11111 112233799999999986322 3677666666544 78999999999
Q ss_pred cCCCC------ceeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCC--
Q 022941 119 EKEVG------CFQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNG-- 176 (289)
Q Consensus 119 D~~~~------~~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-- 176 (289)
|.... .+..+|.+|. .+.++||+|+|.... + -....+|.+||+++|++.+.
T Consensus 219 E~d~~~~~~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~-----~--~~~~~~QY~WL~~dL~~v~r~~ 291 (452)
T KOG1378|consen 219 EIDWPPQPCFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYY-----N--FLKGTAQYQWLERDLASVDRKK 291 (452)
T ss_pred cccCCCcccccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccc-----c--ccccchHHHHHHHHHHHhcccC
Confidence 93222 2356787773 367999999987543 1 14567899999999998754
Q ss_pred -CeEEEEeecccccccc--ccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceec-------------------CCCeE
Q 022941 177 -QWCIVVGFHPLVICEE--HEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSR-------------------QDSIT 234 (289)
Q Consensus 177 -~~~iV~~HhP~~~~~~--~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~-------------------~~gi~ 234 (289)
+|+||++|.|+|++.. +...+....++..|.++|-+++||++|+||.|.|++. ..+..
T Consensus 292 tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPv 371 (452)
T KOG1378|consen 292 TPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPI 371 (452)
T ss_pred CCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCE
Confidence 6999999999999887 5444555567789999999999999999999998721 12456
Q ss_pred EEecCCCCCC------------CCC-cccCCcEEEEEEeCc-EEEEEEEc---CCCcEEEEEEEecCCc
Q 022941 235 YMENPGLIES------------GNG-REMVDGFLLHKVSSL-EILTYFVT---LEGEVVYRTATRERGK 286 (289)
Q Consensus 235 ~i~~g~~~~~------------~~g-~~~~~gf~~v~v~~~-~i~~~~~~---~~g~~~~~~~i~~~~~ 286 (289)
||++|+++.. |+. +....||.++++.+. .+.+..++ ..|.+.|++-+.|+-.
T Consensus 372 yI~~G~~G~~e~~~~~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~ 440 (452)
T KOG1378|consen 372 YITVGDGGNHEHLDPFSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYR 440 (452)
T ss_pred EEEEccCCcccccCcccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccC
Confidence 7887776522 111 678999999999874 36666654 3489999999988643
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=184.01 Aligned_cols=186 Identities=15% Similarity=0.114 Sum_probs=121.7
Q ss_pred EEEEEEeCCCCCCh-hHHHH---HHHHHHHHhhCCccEEEEcCCCCCCC---hhhhhhhccCCCC---CCCeEEecCCCc
Q 022941 50 FYFISVTGGFRPLE-QQTLL---LKQMEDVAKSYDARFVINTSELGEDD---PLKQNATWLFPSL---KVPWYTTKASKE 119 (289)
Q Consensus 50 ~~f~~~gD~~~g~~-~~~~~---~~~l~~~~~~~~pdfvv~~GD~~~~~---~~~~~~~~~~~~l---~~P~~~v~GNHD 119 (289)
|||++++|.+.+.. ....+ .+.+.+.+++.+||+|+++||+.... .+|....+.++.+ ++|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 68999999776543 22222 23344445567899999999986533 2555554444443 599999999999
Q ss_pred CCCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchh--
Q 022941 120 KEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQL-- 197 (289)
Q Consensus 120 ~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~-- 197 (289)
.++.+|+. ...+|++||+++|++++++++||++|||++..+......
T Consensus 81 ------------------~~~~ld~~-------------~~~~ql~WL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~~ 129 (214)
T cd07399 81 ------------------LVLALEFG-------------PRDEVLQWANEVLKKHPDRPAILTTHAYLNCDDSRPDSIDY 129 (214)
T ss_pred ------------------chhhCCCC-------------CCHHHHHHHHHHHHHCCCCCEEEEecccccCCCCcCccccc
Confidence 13445542 347899999999999877899999999998765431110
Q ss_pred --hHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecC-----CC--eEEEecCCCCCCCCCcccCCcEEEEEEeCcE--E
Q 022941 198 --EAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQ-----DS--ITYMENPGLIESGNGREMVDGFLLHKVSSLE--I 264 (289)
Q Consensus 198 --~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~-----~g--i~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~--i 264 (289)
......+.|.++++++ +|+++||||.|.+. ... .| +..+.+.-... ...+.+.|++++++++. |
T Consensus 130 ~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~~~~~~~g~~v~~~~~~~q~~---~~~g~~~~r~~~f~~~~~~i 206 (214)
T cd07399 130 DSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTLVSVGDAGRTVHQMLADYQGE---PNGGNGFLRLLEFDPDNNKI 206 (214)
T ss_pred ccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEEcccCCCCCEeeEEeecccCC---CCCCcceEEEEEEecCCCEE
Confidence 0112345688999999 79999999999955 211 11 22222211111 12346678999998764 5
Q ss_pred EEEEE
Q 022941 265 LTYFV 269 (289)
Q Consensus 265 ~~~~~ 269 (289)
.++.|
T Consensus 207 ~~~ty 211 (214)
T cd07399 207 DVRTY 211 (214)
T ss_pred EEEeC
Confidence 55544
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=174.89 Aligned_cols=170 Identities=15% Similarity=0.186 Sum_probs=110.6
Q ss_pred EEEEeCCCCCChhHHH---HHHHHHHHHhhCCccEEEEcCCCCCCC-----------hhhhhhhccC---CCC-CCCeEE
Q 022941 52 FISVTGGFRPLEQQTL---LLKQMEDVAKSYDARFVINTSELGEDD-----------PLKQNATWLF---PSL-KVPWYT 113 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~---~~~~l~~~~~~~~pdfvv~~GD~~~~~-----------~~~~~~~~~~---~~l-~~P~~~ 113 (289)
|++++|.|.|...... ..+.+....++.+||+||++||+.... .+|..+++.+ ..+ ++|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899998776543222 112344455678999999999974211 1343333433 223 589999
Q ss_pred ecCCCcCCCCce--------eEeE---eC-C--------CCCeEEEEEEcCCCccCCC-CCCCCCCcHHHHHHHHHHHHh
Q 022941 114 TKASKEKEVGCF--------QEQI---RL-P--------HGEALDIIGVNTGSLQGKI-PTALPSASGDLLLNWLKSALE 172 (289)
Q Consensus 114 v~GNHD~~~~~~--------~~~~---~~-p--------~~~~~~~i~lDt~~~~~~~-~~~~~~~~~~~Ql~WL~~~L~ 172 (289)
++||||. .+.. ..++ .. + ..++++||+|||....... +....+.+.++|++||+++|+
T Consensus 82 v~GNHD~-~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~~~L~ 160 (256)
T cd07401 82 IRGNHDL-FNIPSLDSENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLEKELE 160 (256)
T ss_pred eCCCCCc-CCCCCccchhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHHHHHH
Confidence 9999994 3221 1111 11 1 1367999999998643211 000124678899999999999
Q ss_pred hcC-CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 173 ATN-GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 173 ~~~-~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
+++ .+++||++|||+....... ......+.++|++++|+++||||.|.+.
T Consensus 161 ~~~~~~~~IV~~HhP~~~~~~~~-----~~~~~~~~~ll~~~~v~~vl~GH~H~~~ 211 (256)
T cd07401 161 KSTNSNYTIWFGHYPTSTIISPS-----AKSSSKFKDLLKKYNVTAYLCGHLHPLG 211 (256)
T ss_pred hcccCCeEEEEEcccchhccCCC-----cchhHHHHHHHHhcCCcEEEeCCccCCC
Confidence 764 4689999999996543321 0112238999999999999999999954
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=164.63 Aligned_cols=125 Identities=10% Similarity=0.162 Sum_probs=89.9
Q ss_pred CeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccch----hhHHhhHHHHHHHH
Q 022941 135 EALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQ----LEAKKIYEPLHHIF 210 (289)
Q Consensus 135 ~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~----~~~~~~~~~l~~ll 210 (289)
++++||+|||+..... ..+.+.++|++||+++|++++.+++|||+|||++..+..... +......++|.++|
T Consensus 300 ggvrfIvLDSt~~~G~----~~G~L~eeQL~WLeqeLa~a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n~~eLldLL 375 (496)
T TIGR03767 300 GGVRGISMDTTNRAGG----DEGSLGQTQFKWIKDTLRASSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHLGTELVSLL 375 (496)
T ss_pred CCEEEEEEeCCCcCCC----cCCccCHHHHHHHHHHHhcCCCCCEEEEECCCCccccccccccccccccccCHHHHHHHH
Confidence 4589999999853211 235788999999999999887789999999999876432100 11122357899999
Q ss_pred HHh-CCeEEEeCCCccce----e------cCCCeEEEecCCCCCCCCCcccCCcEEEEEEeC---cEEEEEEE
Q 022941 211 MKF-GVNTYLSKHGCIKY----S------RQDSITYMENPGLIESGNGREMVDGFLLHKVSS---LEILTYFV 269 (289)
Q Consensus 211 ~~~-~V~~vl~GH~H~~~----~------~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~---~~i~~~~~ 269 (289)
++| +|.++||||.|... . ...|+..|++++. ...++-|++++|.. +.+++...
T Consensus 376 ~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSl------vdfPq~~Ri~Ei~~n~dgt~si~tt 442 (496)
T TIGR03767 376 LEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASH------IDFPQQGRIIELADNQDGTVSIFTT 442 (496)
T ss_pred hcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEecccc------ccCCCCceEEEEEeCCCCcEEEEEE
Confidence 999 89999999999854 1 1236677877776 45678999999953 34555443
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=161.03 Aligned_cols=159 Identities=17% Similarity=0.171 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHhh-CCccEEEEcCCCCCCCh--h---------hhhhhccCCC--CCCCeEEecCCCcCCCCceeE---
Q 022941 65 QTLLLKQMEDVAKS-YDARFVINTSELGEDDP--L---------KQNATWLFPS--LKVPWYTTKASKEKEVGCFQE--- 127 (289)
Q Consensus 65 ~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~~--~---------~~~~~~~~~~--l~~P~~~v~GNHD~~~~~~~~--- 127 (289)
...+..+++.+.+. .+|||||++||+...+. . ++..++.++. .++|+++++||||.+..+...
T Consensus 52 ~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~ 131 (296)
T cd00842 52 WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNN 131 (296)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcc
Confidence 34444455554433 48999999999864332 1 1112223322 378999999999943221100
Q ss_pred ----------------------------eEe-CCCCCeEEEEEEcCCCccCCCC-CC-CCCCcHHHHHHHHHHHHhhcCC
Q 022941 128 ----------------------------QIR-LPHGEALDIIGVNTGSLQGKIP-TA-LPSASGDLLLNWLKSALEATNG 176 (289)
Q Consensus 128 ----------------------------~~~-~p~~~~~~~i~lDt~~~~~~~~-~~-~~~~~~~~Ql~WL~~~L~~~~~ 176 (289)
.+. ..-.+++++|+|||..+..... .. .......+|++||+++|+++++
T Consensus 132 ~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~ 211 (296)
T cd00842 132 SPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ 211 (296)
T ss_pred cccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 011 1114679999999987653211 00 1224568999999999998753
Q ss_pred --CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhC--CeEEEeCCCccce
Q 022941 177 --QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFG--VNTYLSKHGCIKY 227 (289)
Q Consensus 177 --~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~--V~~vl~GH~H~~~ 227 (289)
..++|++|+|+....... .....++|.+++++|+ |.++|+||+|...
T Consensus 212 ~~~~v~I~~HiPp~~~~~~~----~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 212 AGEKVWIIGHIPPGVNSYDT----LENWSERYLQIINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred CCCeEEEEeccCCCCccccc----chHHHHHHHHHHHHHHHhhheeeecccccce
Confidence 478999999998765431 1345678999999996 7899999999944
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=156.02 Aligned_cols=190 Identities=11% Similarity=-0.005 Sum_probs=117.3
Q ss_pred EEEEEeCCCCCC--hhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC-CCCCeEEecCCCcCCCCce--
Q 022941 51 YFISVTGGFRPL--EQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS-LKVPWYTTKASKEKEVGCF-- 125 (289)
Q Consensus 51 ~f~~~gD~~~g~--~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~-l~~P~~~v~GNHD~~~~~~-- 125 (289)
||++++|.|... .......+++.+.+++.++|+||++||+...........+.+.+ ..+|+|.++||||++.+..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~~~~pv~~v~GNHD~~~~~~~~ 80 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQELKGIKVTFNAGNHDMLKDLTYE 80 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHhcCCcEEEECCCCCCCCCCCHH
Confidence 578999976432 11223334444444556899999999987543222222232322 4689999999999542321
Q ss_pred --eE---eEeCC------CCCeEEEEEEcCCCccC--------------------CCCCC--CCCCcHHHHHHHHHHHHh
Q 022941 126 --QE---QIRLP------HGEALDIIGVNTGSLQG--------------------KIPTA--LPSASGDLLLNWLKSALE 172 (289)
Q Consensus 126 --~~---~~~~p------~~~~~~~i~lDt~~~~~--------------------~~~~~--~~~~~~~~Ql~WL~~~L~ 172 (289)
.+ ...+. ..++++|++++...-.. ..... ..+.+.++|++||++.|+
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~ 160 (239)
T TIGR03729 81 EIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLN 160 (239)
T ss_pred HHHhccchhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHH
Confidence 11 00111 13678999988421110 00001 112467889999999999
Q ss_pred hcCCCeEEEEeecccccccc----c-cchhhH--HhhHHHHHHHHHHhCCeEEEeCCCccce--ecCCCeEEEecCC
Q 022941 173 ATNGQWCIVVGFHPLVICEE----H-EEQLEA--KKIYEPLHHIFMKFGVNTYLSKHGCIKY--SRQDSITYMENPG 240 (289)
Q Consensus 173 ~~~~~~~iV~~HhP~~~~~~----~-~~~~~~--~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~~~~gi~~i~~g~ 240 (289)
++..+++||++||||..... . ...... .....+|.+++++++|+++||||.|... ...++++|+..+-
T Consensus 161 ~~~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~~~~~i~~~~~~~~~~ 237 (239)
T TIGR03729 161 QLDNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRFGPLTIGGTTYHNRPL 237 (239)
T ss_pred hcCCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCCCCEEECCEEEEecCC
Confidence 88778899999999865321 1 001111 1123678899999999999999999954 3458899987643
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=157.11 Aligned_cols=184 Identities=13% Similarity=0.028 Sum_probs=114.7
Q ss_pred EEEeCCCCCC--------hh--HHHHHHHHHHHHhhC--CccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCC
Q 022941 53 ISVTGGFRPL--------EQ--QTLLLKQMEDVAKSY--DARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 53 ~~~gD~~~g~--------~~--~~~~~~~l~~~~~~~--~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
++++|.|.+. .. .....+.+.+..+.. +||+||++||++.... ......+.+..+..|+|+|+|||
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~~v~~V~GNH 81 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDALPGTKVLLKGNH 81 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhCCCCeEEEeCCc
Confidence 5678855442 11 234444554444444 8999999999974322 22222233455666899999999
Q ss_pred cCCCCce-------eE-eEeCC-C----CCeEEEEEEcCCCccCCCC--------CCCCCCcHHHHHHHHHHHHhhcCC-
Q 022941 119 EKEVGCF-------QE-QIRLP-H----GEALDIIGVNTGSLQGKIP--------TALPSASGDLLLNWLKSALEATNG- 176 (289)
Q Consensus 119 D~~~~~~-------~~-~~~~p-~----~~~~~~i~lDt~~~~~~~~--------~~~~~~~~~~Ql~WL~~~L~~~~~- 176 (289)
|++.... .+ .+.+. + .+++.+++++........+ ....+....+|++||+++|++...
T Consensus 82 D~~~~~~~~~~~~l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~ 161 (232)
T cd07393 82 DYWWGSASKLRKALEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELERLELSLKAAKKR 161 (232)
T ss_pred cccCCCHHHHHHHHHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9432111 00 01110 1 2357788776322211000 011234567899999999987542
Q ss_pred ---CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce------ecCCCeEEEecCCCCCCC
Q 022941 177 ---QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY------SRQDSITYMENPGLIESG 245 (289)
Q Consensus 177 ---~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~------~~~~gi~~i~~g~~~~~~ 245 (289)
+++|+++|||++..... .+.+..++++++|+++||||.|... ...+|++|+++++++.+|
T Consensus 162 ~~~~~~i~~~H~p~~~~~~~---------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~gi~~~~~~~~~~~~ 230 (232)
T cd07393 162 EKEKIKIVMLHYPPANENGD---------DSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGGIRYQLVSADYLNF 230 (232)
T ss_pred CCCCCEEEEECCCCcCCCCC---------HHHHHHHHHHcCCCEEEECCCCCCcccccccceECCEEEEEEcchhcCc
Confidence 36999999999775532 1356788899999999999999843 246899999999987654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.4e-20 Score=153.78 Aligned_cols=153 Identities=16% Similarity=0.108 Sum_probs=101.2
Q ss_pred ccEEEEEEeCCCCCChh--------HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-------hhhhhhccCCCCCCCeE
Q 022941 48 LDFYFISVTGGFRPLEQ--------QTLLLKQMEDVAKSYDARFVINTSELGEDDP-------LKQNATWLFPSLKVPWY 112 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~--------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-------~~~~~~~~~~~l~~P~~ 112 (289)
++++|++++|.|.+... .....+.+.++.+..+||+||++||+..... .+++..+.+...++|++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred CceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 46899999997765432 2344455666667789999999999854221 11222223344589999
Q ss_pred EecCCCcCCCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhc-----CCCeEEEEeeccc
Q 022941 113 TTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEAT-----NGQWCIVVGFHPL 187 (289)
Q Consensus 113 ~v~GNHD~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~-----~~~~~iV~~HhP~ 187 (289)
+++|||| . .+.+.++|++||+++|++. ...+.++|+|||+
T Consensus 81 ~~~GNHD-~----------------------------------~g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~ 125 (199)
T cd07383 81 ATFGNHD-G----------------------------------YDWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPL 125 (199)
T ss_pred EECccCC-C----------------------------------CCCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecCh
Confidence 9999999 0 1245678999999999985 3358999999998
Q ss_pred cccccc--------cchhh---HHhhHHHHHHHH-HHhCCeEEEeCCCccce--ecCCCeEE
Q 022941 188 VICEEH--------EEQLE---AKKIYEPLHHIF-MKFGVNTYLSKHGCIKY--SRQDSITY 235 (289)
Q Consensus 188 ~~~~~~--------~~~~~---~~~~~~~l~~ll-~~~~V~~vl~GH~H~~~--~~~~gi~~ 235 (289)
...... +...+ .......+..++ +..+|+++||||+|.+. ...+++.+
T Consensus 126 ~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~~~~i~l 187 (199)
T cd07383 126 PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGRYNGIWL 187 (199)
T ss_pred HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecccCCEEE
Confidence 765321 11111 011234455555 55589999999999954 44566653
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-19 Score=148.50 Aligned_cols=176 Identities=10% Similarity=0.011 Sum_probs=109.9
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCCcCCCCcee---
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASKEKEVGCFQ--- 126 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~--- 126 (289)
++++||.|.+.. .+.+ ...++.+||+||++||++.... .++. ++.+..+++|++.++|||| ......
T Consensus 1 i~~~sD~H~~~~---~~~~---~~~~~~~~D~vv~~GDl~~~~~~~~~~~-~~~l~~~~~p~~~v~GNHD-~~~~~~~~~ 72 (188)
T cd07392 1 ILAISDIHGDVE---KLEA---IILKAEEADAVIVAGDITNFGGKEAAVE-INLLLAIGVPVLAVPGNCD-TPEILGLLT 72 (188)
T ss_pred CEEEEecCCCHH---HHHH---HHhhccCCCEEEECCCccCcCCHHHHHH-HHHHHhcCCCEEEEcCCCC-CHHHHHhhh
Confidence 478999775332 2211 2234568999999999975432 2222 2455667899999999999 432111
Q ss_pred Ee-EeCC----CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHh
Q 022941 127 EQ-IRLP----HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKK 201 (289)
Q Consensus 127 ~~-~~~p----~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~ 201 (289)
.. ..+. ..++++|+++|+..... ........++|++|+ +.+.....++.|+++|+||+.............
T Consensus 73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~l~~~-~~l~~~~~~~~ilv~H~pp~~~~~d~~~~~~~~ 148 (188)
T cd07392 73 SAGLNLHGKVVEVGGYTFVGIGGSNPTP---FNTPIELSEEEIVSD-GRLNNLLAKNLILVTHAPPYGTAVDRVSGGFHV 148 (188)
T ss_pred cCcEecCCCEEEECCEEEEEeCCCCCCC---CCCccccCHHHHHHh-hhhhccCCCCeEEEECCCCcCCcccccCCCCcc
Confidence 10 1111 12458899998753211 111235678899999 666666667899999999976311100000011
Q ss_pred hHHHHHHHHHHhCCeEEEeCCCccce--ecCCCeEEEecC
Q 022941 202 IYEPLHHIFMKFGVNTYLSKHGCIKY--SRQDSITYMENP 239 (289)
Q Consensus 202 ~~~~l~~ll~~~~V~~vl~GH~H~~~--~~~~gi~~i~~g 239 (289)
..+++.+++++++++++||||.|... ...+++.++.+|
T Consensus 149 g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~~~~~~~n~G 188 (188)
T cd07392 149 GSKAIRKFIEERQPLLCICGHIHESRGVDKIGNTLVVNPG 188 (188)
T ss_pred CCHHHHHHHHHhCCcEEEEeccccccceeeeCCeEEecCC
Confidence 24678889999999999999999954 445666666543
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-18 Score=151.94 Aligned_cols=214 Identities=15% Similarity=0.130 Sum_probs=132.8
Q ss_pred EEEEEEeCCCCC--ChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC--hhhhhhhccCC--CCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRP--LEQQTLLLKQMEDVAKSYDARFVINTSELGEDD--PLKQNATWLFP--SLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g--~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~--~~~~~~~~~~~--~l~~P~~~v~GNHD~~~~ 123 (289)
++|+.++|.|.+ ......++..+.+..+..+||+||++||+++.. .+++...+.+. .+..|++.+|||||....
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~~ 80 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLARLELPAPVIVVPGNHDARVV 80 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHhhccCCCceEeeCCCCcCCch
Confidence 479999998877 444444555554445567899999999998763 24444445556 678899999999994332
Q ss_pred ce---eEeEe--------CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---eEEEEeeccccc
Q 022941 124 CF---QEQIR--------LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQ---WCIVVGFHPLVI 189 (289)
Q Consensus 124 ~~---~~~~~--------~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~---~~iV~~HhP~~~ 189 (289)
.. ...+. ....++++++.+||.... .+.+.+...|++||++.|++.... .++++.|||+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~ 155 (301)
T COG1409 81 NGEAFSDQFFNRYAVLVGACSSGGWRVIGLDSSVPG-----VPLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPS 155 (301)
T ss_pred HHHHhhhhhcccCcceEeeccCCceEEEEecCCCCC-----CCCCEECHHHHHHHHHHHHhCccccCceEEEecCCCCCC
Confidence 21 11111 111256899999998643 234578999999999999987654 455555555554
Q ss_pred cccccchhhHHhhHHHHHHHHHHhC--CeEEEeCCCccc--e-ecCCCeEEEe----cCCCCCCCCCcccCCcEEEEEEe
Q 022941 190 CEEHEEQLEAKKIYEPLHHIFMKFG--VNTYLSKHGCIK--Y-SRQDSITYME----NPGLIESGNGREMVDGFLLHKVS 260 (289)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~ll~~~~--V~~vl~GH~H~~--~-~~~~gi~~i~----~g~~~~~~~g~~~~~gf~~v~v~ 260 (289)
.... ...........+..++..++ |+++|+||.|.. . ....+..... .++.+..+........|..+++.
T Consensus 156 ~~~~-~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T COG1409 156 PGTG-VDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGTRLSDLLVGAGPATCSQVFRGSATAFNTLDLD 234 (301)
T ss_pred CCCc-cceeeeecchhHHHHHHhcCCceEEEEeCcccccccccceeCCeeeeecccccCCccceeecCCCccceeeeeec
Confidence 4332 11122233456778888887 999999999986 4 3333333331 22222221113344555666776
Q ss_pred CcEEEEEEE
Q 022941 261 SLEILTYFV 269 (289)
Q Consensus 261 ~~~i~~~~~ 269 (289)
........+
T Consensus 235 ~~~~~~~~~ 243 (301)
T COG1409 235 GPGVRVLVL 243 (301)
T ss_pred CCCeeEEEE
Confidence 555544433
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-18 Score=137.21 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=98.2
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhh------ccCCCCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNAT------WLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~------~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
+||+++||.|.+..........+.......++|+||++||+...+....... .......+|+++++||||.+..
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 6999999977654332112344445566789999999999976543221111 1123458899999999994321
Q ss_pred ce---------eEeE-----eCCCCCeEEEEEEcCCCcc-CCCCCCCCC--CcHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 022941 124 CF---------QEQI-----RLPHGEALDIIGVNTGSLQ-GKIPTALPS--ASGDLLLNWLKSALEATNGQWCIVVGFHP 186 (289)
Q Consensus 124 ~~---------~~~~-----~~p~~~~~~~i~lDt~~~~-~~~~~~~~~--~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP 186 (289)
.. .... ........ .......... ......... .....++.|+...+.....+++||++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p 159 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHP 159 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSS
T ss_pred ccccccccccccccccccccccccCcce-eeecccccccccccccccccccccchhcccccccccccccccceeEEEecC
Confidence 10 0000 00110111 1111111111 000000001 22334455555555555567999999999
Q ss_pred ccccccccch-hhHHhhHHHHHHHHHHhCCeEEEeCCCccc
Q 022941 187 LVICEEHEEQ-LEAKKIYEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 187 ~~~~~~~~~~-~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
++........ ......++.+..++++++|+++|+||+|.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 160 PYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred CCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9987654110 001234678889999999999999999975
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=144.79 Aligned_cols=150 Identities=12% Similarity=-0.024 Sum_probs=96.0
Q ss_pred HHHhhCCccEEEEcCCCCCCC-----hhhhhhh----ccCCCC--CCCeEEecCCCcCCCCc---------eeEeEeCC-
Q 022941 74 DVAKSYDARFVINTSELGEDD-----PLKQNAT----WLFPSL--KVPWYTTKASKEKEVGC---------FQEQIRLP- 132 (289)
Q Consensus 74 ~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~----~~~~~l--~~P~~~v~GNHD~~~~~---------~~~~~~~p- 132 (289)
.+.+..+||+||++||+...+ .+|.+.+ +++..+ .+|++.||||||...++ |.+.|..+
T Consensus 39 ~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~~~ 118 (257)
T cd08163 39 YMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGPTS 118 (257)
T ss_pred HHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCCCc
Confidence 344557899999999985432 2454333 345443 47999999999932221 11112111
Q ss_pred ---CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCeEEEEeeccccccccc--c---chhhH----
Q 022941 133 ---HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN-GQWCIVVGFHPLVICEEH--E---EQLEA---- 199 (289)
Q Consensus 133 ---~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~iV~~HhP~~~~~~~--~---~~~~~---- 199 (289)
..++++||+|||..+... ....+..+|.+||++.|+... ..++||++|||+|..... + +....
T Consensus 119 ~~~~~~~~~fV~Lds~~l~~~----~~~~~~~~~~~~l~~~l~~~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~~~ 194 (257)
T cd08163 119 RVIDVGNHTFVILDTISLSNK----DDPDVYQPPREFLHSFSAMKVKSKPRILLTHVPLYRPPNTSCGPLRESKTPLPYG 194 (257)
T ss_pred eEEEECCEEEEEEccccccCC----cccccchhHHHHHHhhhhccCCCCcEEEEeccccccCCCCCCCCccccCCCCCCC
Confidence 136789999999754321 123567789999999998754 468999999999865321 1 00000
Q ss_pred --H----h-hHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 200 --K----K-IYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 200 --~----~-~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
. . -.+.-..||++.+..+|||||+|.|-
T Consensus 195 ~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C 229 (257)
T cd08163 195 YGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYC 229 (257)
T ss_pred CCccceeecCHHHHHHHHHhhCCcEEEecCCCccc
Confidence 0 0 02344467777799999999999964
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=131.32 Aligned_cols=128 Identities=18% Similarity=0.187 Sum_probs=86.6
Q ss_pred EEEEeCCCCCChhHHHH------HHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCC---CCeEEecCCCcC
Q 022941 52 FISVTGGFRPLEQQTLL------LKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLK---VPWYTTKASKEK 120 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~------~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~---~P~~~v~GNHD~ 120 (289)
+++++|.|.+....... .+.+.+..++.+||+|+++||+..... +|+...+.+..+. +|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~GNHD- 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPLEPVLVVPGNHD- 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccCCcEEEeCCCCe-
Confidence 47889977655322111 122444556678999999999865432 3443333344432 59999999999
Q ss_pred CCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHH
Q 022941 121 EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 121 ~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
. ||++|||++......... .
T Consensus 80 ~----------------------------------------------------------iv~~Hhp~~~~~~~~~~~--~ 99 (144)
T cd07400 80 V----------------------------------------------------------IVVLHHPLVPPPGSGRER--L 99 (144)
T ss_pred E----------------------------------------------------------EEEecCCCCCCCcccccc--C
Confidence 2 999999998875431111 1
Q ss_pred hhHHHHHHHHHHhCCeEEEeCCCccce-ec----CCCeEEEecCC
Q 022941 201 KIYEPLHHIFMKFGVNTYLSKHGCIKY-SR----QDSITYMENPG 240 (289)
Q Consensus 201 ~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~----~~gi~~i~~g~ 240 (289)
...+.+.++++++++++++|||.|... .. .+++.++.+|+
T Consensus 100 ~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~~~~~~~~~~~aGs 144 (144)
T cd07400 100 LDAGDALKLLAEAGVDLVLHGHKHVPYVGNISNAGGGLVVIGAGT 144 (144)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCcCeeeccCCCCCEEEEecCC
Confidence 145679999999999999999999955 33 45677777664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-16 Score=134.74 Aligned_cols=191 Identities=9% Similarity=0.033 Sum_probs=116.7
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh---hhhhhhccCCCCCCCeEEecCCCcCCC-Cc
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP---LKQNATWLFPSLKVPWYTTKASKEKEV-GC 124 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~---~~~~~~~~~~~l~~P~~~v~GNHD~~~-~~ 124 (289)
.-+++++||.|. +..++ +++.+.+++.++|+||++||+..... .+....+.+..+..|++++|||||... ..
T Consensus 4 ~~kIl~iSDiHg---n~~~l-e~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~~pv~~V~GNhD~~v~~~ 79 (224)
T cd07388 4 VRYVLATSNPKG---DLEAL-EKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAHLPTFYVPGPQDAPLWEY 79 (224)
T ss_pred eeEEEEEEecCC---CHHHH-HHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCceEEEcCCCChHHHHH
Confidence 457999999875 22222 33333445578999999999976442 223333556677899999999999310 11
Q ss_pred eeEe----------EeCCC-----CCeEEEEEEcCCCccCCCCCCCCCCcHHHHH----HHHHH----HHhhcCCCeEEE
Q 022941 125 FQEQ----------IRLPH-----GEALDIIGVNTGSLQGKIPTALPSASGDLLL----NWLKS----ALEATNGQWCIV 181 (289)
Q Consensus 125 ~~~~----------~~~p~-----~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql----~WL~~----~L~~~~~~~~iV 181 (289)
+.+. ..+.. .+.++|++++..... + ...+++|. +||.+ .+.+...++.|+
T Consensus 80 l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~------~-~e~sE~e~~~~~~~~~~~~l~~~~~~~~~~~VL 152 (224)
T cd07388 80 LREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIAD------E-GEPEEHEALRYPAWVAEYRLKALWELKDYRKVF 152 (224)
T ss_pred HHHHhcccccCccceecCCCeEEecCCeEEEEecCCcCC------C-CCcCHHHHhhhhhhHHHHHHHHHHhCCCCCeEE
Confidence 1111 11111 244788888855322 1 23455552 56433 444444568999
Q ss_pred Eeecccccccc-ccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceecCCCeEEEecCCCCCCCCCcccCCcEEEEEEe
Q 022941 182 VGFHPLVICEE-HEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIESGNGREMVDGFLLHKVS 260 (289)
Q Consensus 182 ~~HhP~~~~~~-~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~ 260 (289)
++|+||+..+. + .-...+..++++++-.+++|||.|.-+-..+++..+..|.. ....|.+++++
T Consensus 153 v~H~PP~g~g~~h-------~GS~alr~~I~~~~P~l~i~GHih~~~~~~g~t~vvNpg~~--------~~g~~a~i~~~ 217 (224)
T cd07388 153 LFHTPPYHKGLNE-------QGSHEVAHLIKTHNPLVVLVGGKGQKHELLGASWVVVPGDL--------SEGRYALLDLR 217 (224)
T ss_pred EECCCCCCCCCCc-------cCHHHHHHHHHHhCCCEEEEcCCceeEEEeCCEEEECCCcc--------cCCcEEEEEec
Confidence 99999988742 2 11346778999999999999999932223344444433332 22467899987
Q ss_pred CcEEE
Q 022941 261 SLEIL 265 (289)
Q Consensus 261 ~~~i~ 265 (289)
+.+++
T Consensus 218 ~~~v~ 222 (224)
T cd07388 218 ARKLE 222 (224)
T ss_pred Cccee
Confidence 65544
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=140.21 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=100.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH-hccCCCceeeecccCCCCCCCCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCC
Q 022941 2 AKRPSWVCTLITQLSLCLALYVA-LNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYD 80 (289)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~ 80 (289)
.||.++..+.+..+++.+.+|+. +....++...++ ... ......++|+++++|.|.+...+....+.+.+..++.+
T Consensus 4 ~rr~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~~--i~~-~~~~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~ 80 (271)
T PRK11340 4 SRRRLLQAAAATIATSSGFGYMHYWEPGWFELIRHR--LAF-FKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQK 80 (271)
T ss_pred cHHHHHHHHHHHHHHHhHhhHHhhhcCceEEEEEEE--ccC-CCCCCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcC
Confidence 46665543333223333444444 233444444442 221 12234679999999988764333333344444456679
Q ss_pred ccEEEEcCCCCCCC--hhhhhhhccCCCC--CCCeEEecCCCcCCCCce-----e-----EeEeCC---------CCCeE
Q 022941 81 ARFVINTSELGEDD--PLKQNATWLFPSL--KVPWYTTKASKEKEVGCF-----Q-----EQIRLP---------HGEAL 137 (289)
Q Consensus 81 pdfvv~~GD~~~~~--~~~~~~~~~~~~l--~~P~~~v~GNHD~~~~~~-----~-----~~~~~p---------~~~~~ 137 (289)
||+|+++||+.+.+ ..+....+.++.+ ..|+|+|+||||++.+.. . ..+.+- ++..+
T Consensus 81 pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi~lL~n~~~~i~~~~~~i 160 (271)
T PRK11340 81 PDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQF 160 (271)
T ss_pred CCEEEEccCcCCCCccccHHHHHHHHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCcEEeeCCeEEEeeCCcEE
Confidence 99999999986521 1222233333333 379999999999543221 0 001111 12334
Q ss_pred EEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeE
Q 022941 138 DIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNT 217 (289)
Q Consensus 138 ~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~ 217 (289)
.++++|.... +. ... .+.++ ++.+.|++.|+|-.- +.+.+.++|+
T Consensus 161 ~i~G~~d~~~------~~--~~~-------~~~~~--~~~~~IlL~H~P~~~------------------~~~~~~~~dL 205 (271)
T PRK11340 161 ELVGTGDLWA------GQ--CKP-------PPASE--ANLPRLVLAHNPDSK------------------EVMRDEPWDL 205 (271)
T ss_pred EEEEecchhc------cC--CCh-------hHhcC--CCCCeEEEEcCCChh------------------HhhccCCCCE
Confidence 4555543110 00 011 11122 245899999999532 1235568999
Q ss_pred EEeCCCcc-ce
Q 022941 218 YLSKHGCI-KY 227 (289)
Q Consensus 218 vl~GH~H~-~~ 227 (289)
+||||+|. |.
T Consensus 206 ~lsGHTHGGQi 216 (271)
T PRK11340 206 MLCGHTHGGQL 216 (271)
T ss_pred EEeccccCCeE
Confidence 99999998 54
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-16 Score=140.91 Aligned_cols=129 Identities=12% Similarity=0.160 Sum_probs=81.4
Q ss_pred EEEEEEcCCCccCC-C-CCCCCCCcHHHHHHHHHHHHhhcC-CCeEEEE-eeccccccccc--cchh----------hHH
Q 022941 137 LDIIGVNTGSLQGK-I-PTALPSASGDLLLNWLKSALEATN-GQWCIVV-GFHPLVICEEH--EEQL----------EAK 200 (289)
Q Consensus 137 ~~~i~lDt~~~~~~-~-~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~iV~-~HhP~~~~~~~--~~~~----------~~~ 200 (289)
+++|+|||...... . +....+.+.++|++||+++|+.++ +++.+|+ +|+|+.+.+.. ..+. ...
T Consensus 305 lrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~n~ 384 (492)
T TIGR03768 305 LKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQNA 384 (492)
T ss_pred eEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhcccccccccccccc
Confidence 39999999864421 0 111235788999999999999876 4454555 55555432221 0000 000
Q ss_pred hhHHHHHHHHHHh-CCeEEEeCCCccce-e----c-----CCCeEEEecCCCCCCCCCcccCCcEEEEEEeC---cEEEE
Q 022941 201 KIYEPLHHIFMKF-GVNTYLSKHGCIKY-S----R-----QDSITYMENPGLIESGNGREMVDGFLLHKVSS---LEILT 266 (289)
Q Consensus 201 ~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~----~-----~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~---~~i~~ 266 (289)
....+|.++|++| +|.++||||.|... + . ..|...|.+.+. +.-++-|++++|.. +.+++
T Consensus 385 ~~~~eLlaLL~~hPnVla~LsGHvHrn~v~a~~~p~~~~pe~gFWeveTaSl------~DfPQq~R~~Ei~~n~d~tvsi 458 (492)
T TIGR03768 385 VSLTGLVTTLQKYPNLLMWIAGHRHLNTVKAFPSPDPARPEYGFWQVETASL------RDFPQQFRTFEIYLNSDDTVSI 458 (492)
T ss_pred ccHHHHHHHHhcCCCeEEEEcCCcccccccccCCCCCCCCcCceEEEeehhh------ccchhhceEEEEEeCCCCeEEE
Confidence 1124899999999 79999999999743 1 1 235666665554 55688899999843 35766
Q ss_pred EEEcC
Q 022941 267 YFVTL 271 (289)
Q Consensus 267 ~~~~~ 271 (289)
...+.
T Consensus 459 ~tt~v 463 (492)
T TIGR03768 459 EAVNV 463 (492)
T ss_pred EEEec
Confidence 66543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.6e-17 Score=132.85 Aligned_cols=157 Identities=13% Similarity=0.049 Sum_probs=97.0
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCCcCCCCceeEeE
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQI 129 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~ 129 (289)
|+++||.|.+........ .+.....++|+++++||+..... .+.. .........|++.++||||++
T Consensus 1 ~~~iSDlH~~~~~~~~~~---~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADL---LNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccc---cccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhcCCccEEEeCCCcceE--------
Confidence 468999776543222221 12234568999999999875432 2211 111223467999999999932
Q ss_pred eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecccccccccc-ch-h-hHHhhHHHH
Q 022941 130 RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHE-EQ-L-EAKKIYEPL 206 (289)
Q Consensus 130 ~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~-~~-~-~~~~~~~~l 206 (289)
+.|++. +.+... ....+++++|+.++++ +++||++||||...+... .. . ......+.+
T Consensus 69 -------~~~~G~--~~w~~~------~~~~~~~~~~~~~d~~----~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l 129 (166)
T cd07404 69 -------VRIIGT--TLWSDI------SLFGEAAARMRMNDFR----GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDL 129 (166)
T ss_pred -------EEEEee--eccccc------CccchHHHHhCCCCCC----CCEEEEeCCCCCccccCccccCCCcchhhhhcc
Confidence 444443 222211 1223356666655554 579999999998765321 00 0 112334567
Q ss_pred HHHHHHhCCeEEEeCCCccce-ecCCCeEEEecC
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENP 239 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g 239 (289)
..++++++|++++|||.|... ...+|+.+++++
T Consensus 130 ~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~~~np 163 (166)
T cd07404 130 DDLILADPIDLWIHGHTHFNFDYRIGGTRVLSNQ 163 (166)
T ss_pred HhHHhhcCCCEEEECCccccceEEECCEEEEecC
Confidence 778888999999999999965 566788888764
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.7e-14 Score=124.20 Aligned_cols=223 Identities=12% Similarity=0.042 Sum_probs=127.2
Q ss_pred CCCccEEEEEEeCCCCCCh----------hH------HHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhh-ccC-
Q 022941 45 RKGLDFYFISVTGGFRPLE----------QQ------TLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNAT-WLF- 104 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~----------~~------~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~-~~~- 104 (289)
..+++|+++.++|-|.|.. .+ .....-|.+..+.++|||||++||+..... ..+... +.+
T Consensus 49 ~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAva 128 (379)
T KOG1432|consen 49 REDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVA 128 (379)
T ss_pred cCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhh
Confidence 4689999999999554322 11 112233666777789999999999743211 122221 222
Q ss_pred --CCCCCCeEEecCCCcCCCCce--------------------------e---------EeEe-CC-----CCCeEEEEE
Q 022941 105 --PSLKVPWYTTKASKEKEVGCF--------------------------Q---------EQIR-LP-----HGEALDIIG 141 (289)
Q Consensus 105 --~~l~~P~~~v~GNHD~~~~~~--------------------------~---------~~~~-~p-----~~~~~~~i~ 141 (289)
-+.+|||.++.|||| ..+.+ . .+.. .+ ...-..+++
T Consensus 129 P~I~~~IPwA~~lGNHD-des~ltr~ql~~~i~~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~lyf 207 (379)
T KOG1432|consen 129 PAIDRKIPWAAVLGNHD-DESDLTRLQLMKFISKLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLYF 207 (379)
T ss_pred hHhhcCCCeEEEecccc-cccccCHHHHHHHHhcCCCccccCCCcccceeeeecccceEEEeccCCCcccccCceeeEEE
Confidence 345999999999999 32211 0 0000 00 112345678
Q ss_pred EcCCCccCCCC-CCCCCCcHHHHHHHHHHHHhh----c-C-CC-eEEEEeeccccccccc-------cch---hhHHhhH
Q 022941 142 VNTGSLQGKIP-TALPSASGDLLLNWLKSALEA----T-N-GQ-WCIVVGFHPLVICEEH-------EEQ---LEAKKIY 203 (289)
Q Consensus 142 lDt~~~~~~~~-~~~~~~~~~~Ql~WL~~~L~~----~-~-~~-~~iV~~HhP~~~~~~~-------~~~---~~~~~~~ 203 (289)
||+......-+ ....+.+.+.|+.||+.+-.+ . + .+ +-+++.|.|+--...- +.. .......
T Consensus 208 ld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~ 287 (379)
T KOG1432|consen 208 LDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHN 287 (379)
T ss_pred EecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccc
Confidence 88875543210 011356788999999987722 1 1 23 7899999997332110 000 0011123
Q ss_pred HHHHHHHH-HhCCeEEEeCCCccce--ecCCC-eEEEecCCCCCCCCC-cccCCcEEEEEEeCcEEEEEE
Q 022941 204 EPLHHIFM-KFGVNTYLSKHGCIKY--SRQDS-ITYMENPGLIESGNG-REMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 204 ~~l~~ll~-~~~V~~vl~GH~H~~~--~~~~g-i~~i~~g~~~~~~~g-~~~~~gf~~v~v~~~~i~~~~ 268 (289)
..++..|. .-+|++|+|||+|... .+..+ +.+.-.|+++.-.+| ..-...-++++++...-.++.
T Consensus 288 sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~~~~~IkT 357 (379)
T KOG1432|consen 288 SGFLTTLVNRGNVKGVFCGHDHVNDFCGELKGELWLCYGGGAGYGGYGIGGWERRARVFELDLNKDRIKT 357 (379)
T ss_pred cHHHHHHHhccCcceEEeccccccceecccCCeEEEEecCCCccCCcCcCCcccceEEEEccccccccce
Confidence 45677777 6699999999999955 55555 555544554443222 122444567888765544443
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-15 Score=120.61 Aligned_cols=155 Identities=15% Similarity=0.175 Sum_probs=93.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeE
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQI 129 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~ 129 (289)
.|++++||.|.+.. .+.+.++.+ .+||+|+++||+... ++.++.++.. |+++++|||| ... +....
T Consensus 1 Mki~~~sD~H~~~~---~~~~~~~~~---~~~d~vi~~GDi~~~----~~~~~~~~~~--~~~~v~GNHD-~~~-~~~~~ 66 (156)
T PF12850_consen 1 MKIAVISDLHGNLD---ALEAVLEYI---NEPDFVIILGDIFDP----EEVLELLRDI--PVYVVRGNHD-NWA-FPNEN 66 (156)
T ss_dssp EEEEEEE--TTTHH---HHHHHHHHH---TTESEEEEES-SCSH----HHHHHHHHHH--EEEEE--CCH-STH-HHSEE
T ss_pred CEEEEEeCCCCChh---HHHHHHHHh---cCCCEEEECCCchhH----HHHHHHHhcC--CEEEEeCCcc-ccc-chhhh
Confidence 48999999887443 233333333 369999999998652 2333433333 9999999999 221 11100
Q ss_pred eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHH
Q 022941 130 RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHI 209 (289)
Q Consensus 130 ~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~l 209 (289)
... . +.+.+...-..+.|+++|.+++..... .+.+..+
T Consensus 67 ~~~----~-----------------------------~~~~~~~~~~~~~i~~~H~~~~~~~~~---------~~~~~~~ 104 (156)
T PF12850_consen 67 DEE----Y-----------------------------LLDALRLTIDGFKILLSHGHPYDVQWD---------PAELREI 104 (156)
T ss_dssp CTC----S-----------------------------SHSEEEEEETTEEEEEESSTSSSSTTT---------HHHHHHH
T ss_pred hcc----c-----------------------------cccceeeeecCCeEEEECCCCcccccC---------hhhhhhh
Confidence 000 0 000111111357899999988764421 2245577
Q ss_pred HHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCc
Q 022941 210 FMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSL 262 (289)
Q Consensus 210 l~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~ 262 (289)
+...+++++++||.|... ...+++.++..|+.+....+ ...+|.+++++++
T Consensus 105 ~~~~~~~~~~~GH~H~~~~~~~~~~~~~~~Gs~~~~~~~--~~~~~~i~~~~~~ 156 (156)
T PF12850_consen 105 LSRENVDLVLHGHTHRPQVFKIGGIHVINPGSIGGPRHG--DQSGYAILDIEDK 156 (156)
T ss_dssp HHHTTSSEEEESSSSSEEEEEETTEEEEEE-GSSS-SSS--SSEEEEEEEETTT
T ss_pred hcccCCCEEEcCCcccceEEEECCEEEEECCcCCCCCCC--CCCEEEEEEEecC
Confidence 888899999999999965 56788999999887665422 3899999999753
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=123.97 Aligned_cols=176 Identities=10% Similarity=0.013 Sum_probs=97.8
Q ss_pred EEEEEeCCCCCChh-----------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC---h-hhhhhhccCCCC---CCCeE
Q 022941 51 YFISVTGGFRPLEQ-----------QTLLLKQMEDVAKSYDARFVINTSELGEDD---P-LKQNATWLFPSL---KVPWY 112 (289)
Q Consensus 51 ~f~~~gD~~~g~~~-----------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~---~-~~~~~~~~~~~l---~~P~~ 112 (289)
||++++|.|.|... +....+.+.+.+.+.+||+||++||+.... . .+....+.+..+ ++|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 58999997766421 223344444555667999999999985422 1 222233344444 78999
Q ss_pred EecCCCcCCCCce--eE-----eEe--------------CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 113 TTKASKEKEVGCF--QE-----QIR--------------LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 113 ~v~GNHD~~~~~~--~~-----~~~--------------~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
+++||||.+.... .. .+. .....++.+++++... ......+++++++.+
T Consensus 81 ~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~----------~~~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGALSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLR----------RSRLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCccccccccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCC----------HHHHHHHHHHHHHHh
Confidence 9999999432211 00 000 0012334444443321 122234445555554
Q ss_pred hhc-CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 172 EAT-NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 172 ~~~-~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
.+. +..+.|+++|+|+.......... .......+...++|++++||.|... ....+...+-+|+.
T Consensus 151 ~~~~~~~~~Il~~H~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~v~~GH~H~~~~~~~~~~~~~ypGS~ 217 (223)
T cd00840 151 RPLDPDDFNILLLHGGVAGAGPSDSER-----APFVPEALLPAGFDYVALGHIHRPQIILGGGPPIVYPGSP 217 (223)
T ss_pred hccCCCCcEEEEEeeeeecCCCCcccc-----cccCcHhhcCcCCCEEECCCcccCeeecCCCceEEeCCCc
Confidence 433 45689999999986554321000 1123344667789999999999955 33344444444543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-12 Score=107.49 Aligned_cols=169 Identities=13% Similarity=0.139 Sum_probs=106.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEe
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIR 130 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~ 130 (289)
+++++||+|.+... ..+.+.+.++.++.++|.|+++||+... +..+.+..++.|++.|.||||... .
T Consensus 1 ~i~viSDtHl~~~~-~~~~~~~~~~~~~~~~d~iih~GDi~~~-----~~~~~l~~~~~~~~~V~GN~D~~~-------~ 67 (178)
T cd07394 1 LVLVIGDLHIPHRA-SDLPAKFKKLLVPGKIQHVLCTGNLCSK-----ETYDYLKTIAPDVHIVRGDFDENL-------N 67 (178)
T ss_pred CEEEEEecCCCCCc-hhhHHHHHHHhccCCCCEEEECCCCCCH-----HHHHHHHhhCCceEEEECCCCccc-------c
Confidence 46899999865522 2233344445554679999999998542 122333344458999999999211 1
Q ss_pred CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHH
Q 022941 131 LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIF 210 (289)
Q Consensus 131 ~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll 210 (289)
+|.. ..+ .-...+|.+.|--.+..... .+.+..++
T Consensus 68 lp~~---~~~---------------------------------~~~g~~i~l~HG~~~~~~~~---------~~~~~~~~ 102 (178)
T cd07394 68 YPET---KVI---------------------------------TVGQFKIGLIHGHQVVPWGD---------PDSLAALQ 102 (178)
T ss_pred CCCc---EEE---------------------------------EECCEEEEEEECCcCCCCCC---------HHHHHHHH
Confidence 1211 000 01245788888533221110 12344456
Q ss_pred HHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC--cccCCcEEEEEEeCcEEEEEEEcCCCcEEE
Q 022941 211 MKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG--REMVDGFLLHKVSSLEILTYFVTLEGEVVY 277 (289)
Q Consensus 211 ~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g--~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~ 277 (289)
++.++|++++||+|.+. ...+++.++..|+.+.+..+ ....+.|.+++++++.+.++.++..+..+.
T Consensus 103 ~~~~~dvii~GHTH~p~~~~~~g~~viNPGSv~~~~~~~~~~~~~syail~~~~~~~~~~~~~l~~~~~~ 172 (178)
T cd07394 103 RQLDVDILISGHTHKFEAFEHEGKFFINPGSATGAFSPLDPNVIPSFVLMDIQGSKVVTYVYQLIDGEVK 172 (178)
T ss_pred HhcCCCEEEECCCCcceEEEECCEEEEECCCCCCCCCCCCCCCCCeEEEEEecCCeEEEEEEEEECCcEE
Confidence 67789999999999966 56678888888887654221 233579999999999999999986444433
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-13 Score=116.32 Aligned_cols=145 Identities=17% Similarity=0.110 Sum_probs=83.8
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhh-hhhccCCCC--CCCeEEecCCCcCCCCce
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQ-NATWLFPSL--KVPWYTTKASKEKEVGCF 125 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~-~~~~~~~~l--~~P~~~v~GNHD~~~~~~ 125 (289)
++++++++|.|.+........+.+.+.+++.+||+|+++||+........ ...+.+..+ .+|++.++||||++.+..
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~~v~~v~GNHD~~~~~~ 80 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPLGVYAVLGNHDYYSGDE 80 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCCCEEEECCCcccccCch
Confidence 47999999987765433223334444445678999999999865433221 223334433 589999999999544322
Q ss_pred eE---e-----EeCCC---------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCeEEEEeeccc
Q 022941 126 QE---Q-----IRLPH---------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN-GQWCIVVGFHPL 187 (289)
Q Consensus 126 ~~---~-----~~~p~---------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~iV~~HhP~ 187 (289)
.. . +.... +..+.+++++. ......++.+.++..+ +++.|++.|.|.
T Consensus 81 ~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~i~G~~~---------------~~~~~~~~~~~~~~~~~~~~~I~l~H~P~ 145 (223)
T cd07385 81 ENWIEALESAGITVLRNESVEISVGGATIGIAGVDD---------------GLGRRPDLEKALKGLDEDDPNILLAHQPD 145 (223)
T ss_pred HHHHHHHHHcCCEEeecCcEEeccCCeEEEEEeccC---------------ccccCCCHHHHHhCCCCCCCEEEEecCCC
Confidence 11 0 11000 11122222111 0112245566666543 468999999975
Q ss_pred cccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccc
Q 022941 188 VICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
... .+.+.++|+++|||+|..
T Consensus 146 ~~~------------------~~~~~~~dl~l~GHtHgg 166 (223)
T cd07385 146 TAE------------------EAAAWGVDLQLSGHTHGG 166 (223)
T ss_pred hhH------------------HhcccCccEEEeccCCCC
Confidence 321 125568999999999993
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-13 Score=106.71 Aligned_cols=125 Identities=13% Similarity=0.062 Sum_probs=80.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCCCC-eEEecCCCcCCCCceeE
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLKVP-WYTTKASKEKEVGCFQE 127 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P-~~~v~GNHD~~~~~~~~ 127 (289)
+++++||.|.... ..+..++|+++++||+..... +++...+.+..++.| ++.|+||||.+..
T Consensus 1 ~i~~isD~H~~~~-----------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~~~~~v~GNHD~~~~---- 65 (135)
T cd07379 1 RFVCISDTHSRHR-----------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLPHPHKIVIAGNHDLTLD---- 65 (135)
T ss_pred CEEEEeCCCCCCC-----------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCCeEEEEECCCCCcCC----
Confidence 4789999775432 113468999999999865332 233333445555555 5789999992110
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHH
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLH 207 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~ 207 (289)
.+++.|++.|.|++....... .....-.+.+.
T Consensus 66 -----------------------------------------------~~~~~ilv~H~~p~~~~~~~~-~~~~~g~~~~~ 97 (135)
T cd07379 66 -----------------------------------------------PEDTDILVTHGPPYGHLDLVS-SGQRVGCEELL 97 (135)
T ss_pred -----------------------------------------------CCCCEEEEECCCCCcCccccc-cCcccCCHHHH
Confidence 235678999999977543210 00111124567
Q ss_pred HHHHHhCCeEEEeCCCccce--e----cCCCeEEEec
Q 022941 208 HIFMKFGVNTYLSKHGCIKY--S----RQDSITYMEN 238 (289)
Q Consensus 208 ~ll~~~~V~~vl~GH~H~~~--~----~~~gi~~i~~ 238 (289)
+++++++++++++||.|.+. . ..+++.++.+
T Consensus 98 ~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~t~~in~ 134 (135)
T cd07379 98 NRVQRVRPKLHVFGHIHEGYGAERVLDTDGETLFVNA 134 (135)
T ss_pred HHHHHHCCcEEEEcCcCCcCceeEecccCCCEEEEeC
Confidence 77889999999999999965 3 4567777754
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.9e-13 Score=106.58 Aligned_cols=153 Identities=16% Similarity=0.119 Sum_probs=94.5
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEe
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIR 130 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~ 130 (289)
|++++||.|... ..+.+.+.. .+ ++|.|+++||+......-. .....|++.|+||||. ...+ -.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~-~~--~~d~ii~~GD~~~~~~~~~------~~~~~~~~~V~GNhD~-~~~~---~~ 64 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALEL-FG--DVDLIIHAGDVLYPGPLNE------LELKAPVIAVRGNCDG-EVDF---PI 64 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHH-hc--CCCEEEECCccccccccch------hhcCCcEEEEeCCCCC-cCCc---cc
Confidence 478999987533 222222222 22 2999999999865332111 1335789999999992 2100 00
Q ss_pred CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHH
Q 022941 131 LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIF 210 (289)
Q Consensus 131 ~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll 210 (289)
+|. .. .+ .-+..+|+++|.++...... .. . ..++
T Consensus 65 ~p~---~~-------------------------------~~--~~~g~~i~v~Hg~~~~~~~~------~~---~-~~~~ 98 (155)
T cd00841 65 LPE---EA-------------------------------VL--EIGGKRIFLTHGHLYGVKNG------LD---R-LYLA 98 (155)
T ss_pred CCc---eE-------------------------------EE--EECCEEEEEECCcccccccc------hh---h-hhhh
Confidence 010 00 00 01246799999987654321 00 1 3456
Q ss_pred HHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEE
Q 022941 211 MKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 211 ~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~ 268 (289)
++.++|++++||+|.+. ...+++.++..|+.+.+.. ....+|.++++++ ++++++
T Consensus 99 ~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~--~~~~~~~i~~~~~-~~~~~~ 154 (155)
T cd00841 99 KEGGADVVLYGHTHIPVIEKIGGVLLLNPGSLSLPRG--GGPPTYAILEIDD-KGEVEI 154 (155)
T ss_pred hhcCCCEEEECcccCCccEEECCEEEEeCCCccCcCC--CCCCeEEEEEecC-CCcEEE
Confidence 77799999999999966 5667888888888765421 3568999999987 666654
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=107.77 Aligned_cols=199 Identities=9% Similarity=0.038 Sum_probs=102.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC---hhhh--------------------------hhh
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD---PLKQ--------------------------NAT 101 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~---~~~~--------------------------~~~ 101 (289)
+++.++|-+. +....+.+...+....||.|+++||+.... .+|. .++
T Consensus 7 kilA~s~~~g----~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff 82 (255)
T PF14582_consen 7 KILAISNFRG----DFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFF 82 (255)
T ss_dssp EEEEEE--TT-----HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcch----HHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHH
Confidence 5677888332 233444454555566999999999984322 2455 334
Q ss_pred ccCCCCCCCeEEecCCCcCCCCce-----eEeEeCC-----------CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHH
Q 022941 102 WLFPSLKVPWYTTKASKEKEVGCF-----QEQIRLP-----------HGEALDIIGVNTGSLQGKIPTALPSASGDLLLN 165 (289)
Q Consensus 102 ~~~~~l~~P~~~v~GNHD~~~~~~-----~~~~~~p-----------~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~ 165 (289)
+.+..+.+|.+++|||||-+...+ ....-.| ..+.+-++++-...........-.-........
T Consensus 83 ~~L~~~~~p~~~vPG~~Dap~~~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~weae 162 (255)
T PF14582_consen 83 RILGELGVPVFVVPGNMDAPERFFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAWEAE 162 (255)
T ss_dssp HHHHCC-SEEEEE--TTS-SHHHHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHHHHH
T ss_pred HHHHhcCCcEEEecCCCCchHHHHHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCccccccccchHHHHH
Confidence 456778999999999999321111 0000011 122344444322211110000001122233445
Q ss_pred HHHHHHhhcCCCeEEEEeeccc-cccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e-cCCCeEEEecCCCC
Q 022941 166 WLKSALEATNGQWCIVVGFHPL-VICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S-RQDSITYMENPGLI 242 (289)
Q Consensus 166 WL~~~L~~~~~~~~iV~~HhP~-~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~-~~~gi~~i~~g~~~ 242 (289)
|..+.|...+...+|+.+|.|| ...+.. ..-.+.+..++++|+-++++|||.|... . ..+.+..+..|+.
T Consensus 163 y~lk~l~elk~~r~IlLfhtpPd~~kg~~------h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~TlVVNPGsL- 235 (255)
T PF14582_consen 163 YSLKFLRELKDYRKILLFHTPPDLHKGLI------HVGSAAVRDLIKTYNPDIVLCGHIHESHGKESLGKTLVVNPGSL- 235 (255)
T ss_dssp HHHGGGGGCTSSEEEEEESS-BTBCTCTB------TTSBHHHHHHHHHH--SEEEE-SSS-EE--EEETTEEEEE--BG-
T ss_pred HHHHHHHhcccccEEEEEecCCccCCCcc------cccHHHHHHHHHhcCCcEEEecccccchhhHHhCCEEEecCccc-
Confidence 5556777776668899999999 333311 1112467789999999999999999865 2 3334444444444
Q ss_pred CCCCCcccCCcEEEEEEeCcEEEEE
Q 022941 243 ESGNGREMVDGFLLHKVSSLEILTY 267 (289)
Q Consensus 243 ~~~~g~~~~~gf~~v~v~~~~i~~~ 267 (289)
...+|+++++.++++...
T Consensus 236 -------~~G~yAvI~l~~~~v~~g 253 (255)
T PF14582_consen 236 -------AEGDYAVIDLEQDKVEFG 253 (255)
T ss_dssp -------GGTEEEEEETTTTEEEEE
T ss_pred -------ccCceeEEEecccccccC
Confidence 237999999999988764
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.9e-12 Score=104.11 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=94.1
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhC-CccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEe
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSY-DARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~-~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
.|++++||.|....... .+.+..+.. ++|.|+++||+... +..+.+..+..|++.|+||||....
T Consensus 1 m~i~viSD~H~~~~~~~----~~~~~~~~~~~~d~ii~~GD~~~~-----~~~~~l~~~~~~~~~V~GN~D~~~~----- 66 (158)
T TIGR00040 1 MKILVISDTHGPLRATE----LPVELFNLESNVDLVIHAGDLTSP-----FVLKEFEDLAAKVIAVRGNNDGERD----- 66 (158)
T ss_pred CEEEEEecccCCcchhH----hHHHHHhhccCCCEEEEcCCCCCH-----HHHHHHHHhCCceEEEccCCCchhh-----
Confidence 37899999875332222 222333344 89999999998621 1223334456689999999992100
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
.+|.. +.-.-....|++.|-.++..... . ..+..
T Consensus 67 -~~~~~------------------------------------~~~~~~g~~i~l~Hg~~~~~~~~------~---~~l~~ 100 (158)
T TIGR00040 67 -ELPEE------------------------------------EIFEAEGIDFGLVHGDLVYPRGD------L---LVLEY 100 (158)
T ss_pred -hCCcc------------------------------------eEEEECCEEEEEEeCcccccCCC------H---HHHHH
Confidence 00100 00011246789999664322111 0 12334
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEE
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEIL 265 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~ 265 (289)
+.+..+++++++||+|... ...+++.++..|+.+.++.+ ..++|.+++++++.++
T Consensus 101 ~~~~~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~~~~~--~~~~~~il~~~~~~~~ 156 (158)
T TIGR00040 101 LAKELGVDVLIFGHTHIPVAEELRGILLINPGSLTGPRNG--NTPSYAILDVDKDKVT 156 (158)
T ss_pred HHhccCCCEEEECCCCCCccEEECCEEEEECCccccccCC--CCCeEEEEEecCCeEE
Confidence 4456689999999999965 55678888887776654321 2679999999887765
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.3e-12 Score=97.58 Aligned_cols=123 Identities=21% Similarity=0.242 Sum_probs=80.4
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhh--ccCCCCCCCeEEecCCCcCCCCceeEe
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNAT--WLFPSLKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~--~~~~~l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
+++||.+.+......... .....+.++|+||++||+..... .+.... ........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~--~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD--------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLE--AALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD--------- 69 (131)
T ss_pred CeeecccCCccchHHHHH--HHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce---------
Confidence 368996665433222111 22344578999999999854332 121111 223556899999999999
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
|+++|.|++.......... ......+..
T Consensus 70 ---------------------------------------------------i~~~H~~~~~~~~~~~~~~-~~~~~~~~~ 97 (131)
T cd00838 70 ---------------------------------------------------ILLTHGPPYDPLDELSPDE-DPGSEALLE 97 (131)
T ss_pred ---------------------------------------------------EEEeccCCCCCchhhcccc-hhhHHHHHH
Confidence 9999999987765411111 113567788
Q ss_pred HHHHhCCeEEEeCCCccce-ec--CCCeEEEec
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SR--QDSITYMEN 238 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~--~~gi~~i~~ 238 (289)
++.+.+++++++||.|.+. .. ..++.+++.
T Consensus 98 ~~~~~~~~~~~~GH~H~~~~~~~~~~~~~~v~~ 130 (131)
T cd00838 98 LLEKYGVDLVLSGHTHVYERREPDGGGTLYINP 130 (131)
T ss_pred HHHHhCCCEEEeCCeeccccccCCCCceEEecC
Confidence 8899999999999999966 33 456666654
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.7e-11 Score=99.87 Aligned_cols=170 Identities=11% Similarity=0.095 Sum_probs=97.1
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hh------hhhhccCCCCCCCeEEecCCCcCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LK------QNATWLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~------~~~~~~~~~l~~P~~~v~GNHD~~ 121 (289)
.|++++||.|... .++ +.+.+..++.++|.++++||+....+ .| .+..+.+..++.|++.|+||||.+
T Consensus 1 mri~viSD~Hg~~---~~~-~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSL---PAT-EKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCH---HHH-HHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcCCceEEEccCCcch
Confidence 3789999988432 222 23333345578999999999854221 11 222334455667999999999932
Q ss_pred CCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHh
Q 022941 122 VGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKK 201 (289)
Q Consensus 122 ~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~ 201 (289)
...... .+|. . . ...|+ .. +..+|+++|..++... .
T Consensus 77 ~~~~~~--~~~~--------------~------~-------~~~~~-----~l-~g~~i~l~HG~~~~~~---------~ 112 (182)
T PRK09453 77 VDQMLL--HFPI--------------M------A-------PYQQV-----LL-EGKRLFLTHGHLYGPE---------N 112 (182)
T ss_pred hhhhcc--CCcc--------------c------C-------ceEEE-----EE-CCeEEEEECCCCCChh---------h
Confidence 211000 0000 0 0 00000 01 2356888897554311 0
Q ss_pred hHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcC-CCcEEEEE
Q 022941 202 IYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTL-EGEVVYRT 279 (289)
Q Consensus 202 ~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~-~g~~~~~~ 279 (289)
+.+..++|++++||.|.+. ...+++.++..|+.+.+. + .....|.++++. .+ +.++. .|+++-+.
T Consensus 113 -------~~~~~~~d~vi~GHtH~p~~~~~~~~~~iNpGs~~~p~-~-~~~~s~~il~~~--~~--~~~~~~~~~~~~~~ 179 (182)
T PRK09453 113 -------LPALHDGDVLVYGHTHIPVAEKQGGIILFNPGSVSLPK-G-GYPASYGILDDN--VL--SVIDLEGGEVIAQV 179 (182)
T ss_pred -------cccccCCCEEEECCCCCCcceEECCEEEEECCCccccC-C-CCCCeEEEEECC--cE--EEEECCCCeEEEee
Confidence 0123468999999999965 556789999888866542 1 345688888873 44 44443 34566554
Q ss_pred E
Q 022941 280 A 280 (289)
Q Consensus 280 ~ 280 (289)
.
T Consensus 180 ~ 180 (182)
T PRK09453 180 A 180 (182)
T ss_pred c
Confidence 4
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-10 Score=95.84 Aligned_cols=205 Identities=11% Similarity=0.036 Sum_probs=116.7
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCC--CCCh--hhhhh--hccCCCCCCCeEEecCCCcCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELG--EDDP--LKQNA--TWLFPSLKVPWYTTKASKEKEV 122 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~--~~~~--~~~~~--~~~~~~l~~P~~~v~GNHD~~~ 122 (289)
.++++.++|-|... ...+++..++...++|+++++||++ .-++ .-.+. .+...+..+|++++|||=| ..
T Consensus 3 ~mkil~vtDlHg~~----~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~~~v~avpGNcD-~~ 77 (226)
T COG2129 3 KMKILAVTDLHGSE----DSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKELGIPVLAVPGNCD-PP 77 (226)
T ss_pred cceEEEEeccccch----HHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhcCCeEEEEcCCCC-hH
Confidence 57899999966422 2233344445556899999999987 3222 11111 2334567899999999988 32
Q ss_pred Cce---e-EeEeC----CCCCeEEEEEEcCCCccCCCCCCCCCCcHHHH-HHHHHHHHhhcCCCeEEEEeeccccccccc
Q 022941 123 GCF---Q-EQIRL----PHGEALDIIGVNTGSLQGKIPTALPSASGDLL-LNWLKSALEATNGQWCIVVGFHPLVICEEH 193 (289)
Q Consensus 123 ~~~---~-~~~~~----p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Q-l~WL~~~L~~~~~~~~iV~~HhP~~~~~~~ 193 (289)
.-. . +-..+ ..-+++.|+++-...... -......++++ +.-|++-+....+.-.|+.+|.||+.....
T Consensus 78 ~v~~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp---~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~HaPP~gt~~d 154 (226)
T COG2129 78 EVIDVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTP---FNTPREFSEDEIYSKLKSLVKKADNPVNILLTHAPPYGTLLD 154 (226)
T ss_pred HHHHHHHhcccccccceEEecCcEEEEecccCCCC---CCCccccCHHHHHHHHHHHHhcccCcceEEEecCCCCCcccc
Confidence 110 0 00011 112334455422111110 01112344443 344555555443333399999999887543
Q ss_pred cchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ec-CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEE
Q 022941 194 EEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SR-QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFV 269 (289)
Q Consensus 194 ~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~-~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~ 269 (289)
...+...--.+.+..++++.+..+.+|||.|-.. .+ .+.+..+..|.. ....|+++++.+..+..+.+
T Consensus 155 ~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~TivVNPG~~--------~~g~yA~i~l~~~~Vk~~~~ 224 (226)
T COG2129 155 TPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGNTIVVNPGPL--------GEGRYALIELEKEVVKLEQF 224 (226)
T ss_pred CCCCccccchHHHHHHHHHhCCceEEEeeecccccccccCCeEEECCCCc--------cCceEEEEEecCcEEEEEEe
Confidence 1011012224678899999999999999999855 33 344444444432 34788999999887766543
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-11 Score=99.53 Aligned_cols=112 Identities=12% Similarity=0.083 Sum_probs=72.2
Q ss_pred HHHHHHhhCCccEEEEcCCCCCCC-----hhhhhhhc----cCCC-CCCCeEEecCCCcCCCCceeEeEeCCCCCeEEEE
Q 022941 71 QMEDVAKSYDARFVINTSELGEDD-----PLKQNATW----LFPS-LKVPWYTTKASKEKEVGCFQEQIRLPHGEALDII 140 (289)
Q Consensus 71 ~l~~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~~----~~~~-l~~P~~~v~GNHD~~~~~~~~~~~~p~~~~~~~i 140 (289)
.+.+..+..+||+|+++||+.... ..|..... .+.. ..+|++.++|||| ....
T Consensus 29 ~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD-~~~~---------------- 91 (156)
T cd08165 29 SFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHD-IGFH---------------- 91 (156)
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCC-cCCC----------------
Confidence 455556678999999999985421 23433222 2322 3689999999999 2110
Q ss_pred EEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEe
Q 022941 141 GVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLS 220 (289)
Q Consensus 141 ~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~ 220 (289)
. .....-++++++.+ |++.|+|.+. ++.+++.+++||
T Consensus 92 ---~-------------~~~~~~~~~~~~~~--------~~l~H~p~~~-------------------~~~~~~~~~~l~ 128 (156)
T cd08165 92 ---Y-------------EMTTYKLERFEKVF--------ILLQHFPLYR-------------------LLQWLKPRLVLS 128 (156)
T ss_pred ---C-------------ccCHHHHHHHHHHe--------eeeeCChHHH-------------------HHHhhCCCEEEE
Confidence 0 01112233344333 9999999621 456678889999
Q ss_pred CCCccce--ecCCCeEEEecCCCC
Q 022941 221 KHGCIKY--SRQDSITYMENPGLI 242 (289)
Q Consensus 221 GH~H~~~--~~~~gi~~i~~g~~~ 242 (289)
||.|... ...+++..+|.++.+
T Consensus 129 GH~H~~~~~~~~~~~~e~~~~~~~ 152 (156)
T cd08165 129 GHTHSFCEVTHPDGTPEVTVPSFS 152 (156)
T ss_pred cccCCCceeEEECCEEEEEEecce
Confidence 9999954 566899999987764
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.4e-10 Score=103.97 Aligned_cols=95 Identities=5% Similarity=-0.008 Sum_probs=57.5
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e----cCCCeEEEecCCCCCC-C-CCcc
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S----RQDSITYMENPGLIES-G-NGRE 249 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~----~~~gi~~i~~g~~~~~-~-~g~~ 249 (289)
.+.|++.|+........ .... ..++ ..+.|+|+.||.|... . ..++...+-+|+.-.. . .+..
T Consensus 201 ~fnIlv~Hq~~~~~~~~------~~ip---e~ll-p~~fDYValGHiH~~~~~p~~~~~~~~~V~ypGS~v~tSf~e~E~ 270 (405)
T TIGR00583 201 WFNLLVLHQNHAAHTST------SFLP---ESFI-PDFFDLVIWGHEHECLPDPVYNPSDGFYVLQPGSTVATSLTPGEA 270 (405)
T ss_pred ceEEEEeCceecCCCCc------ccCc---hhhh-hccCcEEEecccccccccccccCCCCceEEECCCccccccccccc
Confidence 46899999997332211 0111 1223 4579999999999843 1 1223344445553222 2 2234
Q ss_pred cCCcEEEEEEeCcEEEEEEEcCC-CcEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFVTLE-GEVVYRTAT 281 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~~~~-g~~~~~~~i 281 (289)
.+.||.+++++++.++++.+... -+.+...++
T Consensus 271 ~~Kgv~lVeI~~~~~~~~~IpL~~vRpf~~~~i 303 (405)
T TIGR00583 271 LPKHVFILNIKGRKFASKPIPLQTVRPFVMKEI 303 (405)
T ss_pred CCCEEEEEEEcCCeeEEEEeeCCCcccEEEEEE
Confidence 68999999999888999988765 344554444
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.5e-11 Score=94.45 Aligned_cols=114 Identities=15% Similarity=0.285 Sum_probs=71.8
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEeCC
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIRLP 132 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~~p 132 (289)
+++||+|.. ....+.+. ....++|+++++||+... .. .....+ .+.|++.++||||
T Consensus 1 ~viSDtH~~----~~~~~~~~--~~~~~~d~ii~~GD~~~~--~~-~~~~~~--~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESP----ALYSPEIK--VRLEGVDLILSAGDLPKE--YL-EYLVTM--LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCc----cccchHHH--hhCCCCCEEEECCCCChH--HH-HHHHHH--cCCCEEEEeCCCc-------------
Confidence 478998832 11222221 124789999999997421 11 111111 3668999999999
Q ss_pred CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH
Q 022941 133 HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK 212 (289)
Q Consensus 133 ~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~ 212 (289)
..|+++|+|++...... . ....-.+.+.+++++
T Consensus 57 ---------------------------------------------~~Ilv~H~pp~~~~~~~-~-~~~~g~~~l~~~l~~ 89 (129)
T cd07403 57 ---------------------------------------------VDILLTHAPPAGIGDGE-D-FAHRGFEAFLDFIDR 89 (129)
T ss_pred ---------------------------------------------cCEEEECCCCCcCcCcc-c-ccccCHHHHHHHHHH
Confidence 45899999987543210 0 011224577788899
Q ss_pred hCCeEEEeCCCccce--e----cCCCeEEEe
Q 022941 213 FGVNTYLSKHGCIKY--S----RQDSITYME 237 (289)
Q Consensus 213 ~~V~~vl~GH~H~~~--~----~~~gi~~i~ 237 (289)
++++++|+||.|... . ..+++.++.
T Consensus 90 ~~~~~vl~GH~H~~~~~~~~~~~~~~t~~~n 120 (129)
T cd07403 90 FRPKLFIHGHTHLNYGYQLRIRRVGDTTVIN 120 (129)
T ss_pred HCCcEEEEcCcCCCcCccccccccCCEEEEe
Confidence 999999999999854 2 245566653
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=99.52 Aligned_cols=183 Identities=10% Similarity=0.009 Sum_probs=94.8
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee---
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ--- 126 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~--- 126 (289)
+|++++||.|..... .. .+..++.+||+|+++||++.... +..+.+..+..|+++++||||.+.+...
T Consensus 1 ~rIa~isDiHg~~~~-~~-----~~~l~~~~pD~Vl~~GDi~~~~~---~~~~~l~~l~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 1 LRIAIVGDVHGQWDL-ED-----IKALHLLQPDLVLFVGDFGNESV---QLVRAISSLPLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred CEEEEEecCCCCchH-HH-----HHHHhccCCCEEEECCCCCcChH---HHHHHHHhCCCCeEEEcCCCcccccccccch
Confidence 589999997743221 11 12344568999999999975432 2233445667899999999995443211
Q ss_pred -----EeEeCCC-----CC-----eEEEEEEcCCCccC--CCCCCC------C-CCcHHHHHHHHHHHHhh-cCCCeEEE
Q 022941 127 -----EQIRLPH-----GE-----ALDIIGVNTGSLQG--KIPTAL------P-SASGDLLLNWLKSALEA-TNGQWCIV 181 (289)
Q Consensus 127 -----~~~~~p~-----~~-----~~~~i~lDt~~~~~--~~~~~~------~-~~~~~~Ql~WL~~~L~~-~~~~~~iV 181 (289)
+++.... .+ ...+..+-+.++.. .++..+ . ...-++-++.+-+.++. .+....|+
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0000000 00 01122222333221 111110 0 11223334444444533 23456899
Q ss_pred Eeecccccccccc------------chhhHHhhHHHHHHHHHHhCCeEEEeCCCccc--ee---------cCCCeEEEec
Q 022941 182 VGFHPLVICEEHE------------EQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIK--YS---------RQDSITYMEN 238 (289)
Q Consensus 182 ~~HhP~~~~~~~~------------~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~--~~---------~~~gi~~i~~ 238 (289)
+.|.++...+... .+.....+++++..+-..-.++++++||.|.. +. ..+|+.|+.+
T Consensus 152 iaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~ 231 (238)
T cd07397 152 LAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAVDREGTVYLNA 231 (238)
T ss_pred EeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeeecCCCeEEEec
Confidence 9999997765320 00111334444433332234899999999985 31 1267888876
Q ss_pred CCC
Q 022941 239 PGL 241 (289)
Q Consensus 239 g~~ 241 (289)
+..
T Consensus 232 a~~ 234 (238)
T cd07397 232 ASV 234 (238)
T ss_pred ccc
Confidence 543
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.19 E-value=6.7e-10 Score=105.18 Aligned_cols=219 Identities=13% Similarity=0.139 Sum_probs=104.9
Q ss_pred CCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--------------------------hhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--------------------------LKQ 98 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--------------------------~~~ 98 (289)
.....+||++.++....... ...+..+++..+|||+|++||....+. .|+
T Consensus 101 ~~~~~~r~a~~SC~~~~~~~----~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR 176 (453)
T PF09423_consen 101 GDPDPFRFAFGSCQNYEDGY----FPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYR 176 (453)
T ss_dssp -----EEEEEE----CCC-------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHH
T ss_pred CCCCceEEEEECCCCcccCh----HHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHH
Confidence 34566999999994432111 233444454468999999999643221 111
Q ss_pred hhhcc------CCCC--CCCeEEecCCCcCCCCcee-----------Ee-----------E--eCC--------------
Q 022941 99 NATWL------FPSL--KVPWYTTKASKEKEVGCFQ-----------EQ-----------I--RLP-------------- 132 (289)
Q Consensus 99 ~~~~~------~~~l--~~P~~~v~GNHD~~~~~~~-----------~~-----------~--~~p-------------- 132 (289)
..|.. +..+ .+|++++.-.|| +..+.. .. | ++|
T Consensus 177 ~~y~~~~~~p~l~~~~~~~P~~~iwDDHd-i~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y 255 (453)
T PF09423_consen 177 RRYRQYRSDPDLRRLHANVPWIMIWDDHD-IGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIY 255 (453)
T ss_dssp HHHHHHHT-HHHHHHHHHSEEEE---STT-TSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----
T ss_pred HHHHHHcCCHHHHHHhhcccEEEEccCce-ecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceE
Confidence 11211 1112 689999999999 332221 00 0 011
Q ss_pred ----CCCeEEEEEEcCCCccCCCC------------CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccc---
Q 022941 133 ----HGEALDIIGVNTGSLQGKIP------------TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEH--- 193 (289)
Q Consensus 133 ----~~~~~~~i~lDt~~~~~~~~------------~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~--- 193 (289)
.+..+.|++||+..+..... .....-++.+|++||++.|+++.++|+||+.-.|+......
T Consensus 256 ~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~a~~kvi~s~v~~~~~~~~~~~ 335 (453)
T PF09423_consen 256 RSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQATWKVIGSSVPFSPLNFPDAA 335 (453)
T ss_dssp EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH--SSEEEEE-SS--S---SS-SS
T ss_pred EEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCCCcEEEEEeCCceecccccccc
Confidence 02338999999987664211 12234789999999999999998999999987776443221
Q ss_pred -------cchhhHHhhHHHHHHHHHHhCCe--EEEeCCCccce----ecCC---------CeEEEecCCCCCC-C-----
Q 022941 194 -------EEQLEAKKIYEPLHHIFMKFGVN--TYLSKHGCIKY----SRQD---------SITYMENPGLIES-G----- 245 (289)
Q Consensus 194 -------~~~~~~~~~~~~l~~ll~~~~V~--~vl~GH~H~~~----~~~~---------gi~~i~~g~~~~~-~----- 245 (289)
..+......+++|+++|++.++. ++|||..|... .... .+.-+++++.+.. .
T Consensus 336 ~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~~~~Ef~~s~vts~~~~~~~~ 415 (453)
T PF09423_consen 336 EGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDDADPPDGPGSVGVEFTSSSVTSPGFGLGTS 415 (453)
T ss_dssp -S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESSTT---TTS-EEEEEEE---SSTT-S-BSB-
T ss_pred cccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeeecccccccccCCCCCeEEEEECCCccCCCcccccc
Confidence 11222234578999999988774 78999999943 1111 1233454442211 1
Q ss_pred ----------CC-----cccCCcEEEEEEeCcEEEEEE
Q 022941 246 ----------NG-----REMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 246 ----------~g-----~~~~~gf~~v~v~~~~i~~~~ 268 (289)
+. .....||.+|+++++.++.++
T Consensus 416 ~~~~~~~~~~np~~~~~~~~~~G~~~i~~~~~~~~~~~ 453 (453)
T PF09423_consen 416 PALDRALDKANPHLKFADLRNFGYVEIDITPERVTAEW 453 (453)
T ss_dssp TTHHH-HHHH-TTEEEEE-B-EEEEEEEEETTEEEEEE
T ss_pred hhhhhhhhhcCCceEEeECCCCcEEEEEEccceEEEEC
Confidence 00 346899999999999988764
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-09 Score=88.51 Aligned_cols=164 Identities=13% Similarity=0.170 Sum_probs=104.9
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC-CCCCeEEecCCCcCCCCceeEe
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS-LKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~-l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
.+++++||+|.... . .+...+.....++|+||++||...... ...++. +..+++.|.||.|.....
T Consensus 2 m~ilviSDtH~~~~---~-~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~l~~~~~~~i~~V~GN~D~~~~~---- 68 (172)
T COG0622 2 MKILVISDTHGPLR---A-IEKALKIFNLEKVDAVIHAGDSTSPFT-----LDALEGGLAAKLIAVRGNCDGEVDQ---- 68 (172)
T ss_pred cEEEEEeccCCChh---h-hhHHHHHhhhcCCCEEEECCCcCCccc-----hHHhhcccccceEEEEccCCCcccc----
Confidence 47899999887443 1 222333445679999999999754322 112222 567899999999921100
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
-..|. +..+ .-+..+|.+.|=-.+..... ...+..
T Consensus 69 ~~~p~----------------------------------~~~~--~~~g~ki~l~HGh~~~~~~~---------~~~l~~ 103 (172)
T COG0622 69 EELPE----------------------------------ELVL--EVGGVKIFLTHGHLYFVKTD---------LSLLEY 103 (172)
T ss_pred ccCCh----------------------------------hHeE--EECCEEEEEECCCccccccC---------HHHHHH
Confidence 00000 0011 11346788888655442211 123444
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCC
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEG 273 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g 273 (289)
+.++.++|+++.||+|... ...+++.++..|+.+.++.+ .+.+|.++++.+.++.+.+++.+.
T Consensus 104 la~~~~~Dvli~GHTH~p~~~~~~~i~~vNPGS~s~pr~~--~~~sy~il~~~~~~~~~~~~~~~~ 167 (172)
T COG0622 104 LAKELGADVLIFGHTHKPVAEKVGGILLVNPGSVSGPRGG--NPASYAILDVDNLEVEVLFLERDR 167 (172)
T ss_pred HHHhcCCCEEEECCCCcccEEEECCEEEEcCCCcCCCCCC--CCcEEEEEEcCCCEEEEEEeeccc
Confidence 5567789999999999965 66678888888887776432 445999999999999988876554
|
|
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.8e-10 Score=100.68 Aligned_cols=94 Identities=7% Similarity=-0.009 Sum_probs=54.4
Q ss_pred hccCCCceeeecccCCCCCCCCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCC--Chhhhhhhc
Q 022941 25 LNLGQPQKSIYQRTNGISSNRKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGED--DPLKQNATW 102 (289)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~--~~~~~~~~~ 102 (289)
+.....+...+... .-++......++++.++|.|..... ....+.+.++.+ ..||+|+++||+... .+.+....+
T Consensus 21 ~~~~~l~~~~~~i~-~~~~~~~~~~~~iv~lSDlH~~~~~-~~~~~~~~~i~~-~~~DlivltGD~~~~~~~~~~~~~~~ 97 (284)
T COG1408 21 LEPGWLRVVKLTIL-TPKLPASLQGLKIVQLSDLHSLPFR-EEKLALLIAIAN-ELPDLIVLTGDYVDGDRPPGVAALAL 97 (284)
T ss_pred cccceEEEEEEEee-cCCCCcccCCeEEEEeehhhhchhh-HHHHHHHHHHHh-cCCCEEEEEeeeecCCCCCCHHHHHH
Confidence 44444555444211 1112345678899999997765443 333333434433 456999999997552 223333333
Q ss_pred cCCCC--CCCeEEecCCCcCC
Q 022941 103 LFPSL--KVPWYTTKASKEKE 121 (289)
Q Consensus 103 ~~~~l--~~P~~~v~GNHD~~ 121 (289)
.+..| ..++|++.||||+.
T Consensus 98 ~L~~L~~~~gv~av~GNHd~~ 118 (284)
T COG1408 98 FLAKLKAPLGVFAVLGNHDYG 118 (284)
T ss_pred HHHhhhccCCEEEEecccccc
Confidence 44444 45689999999943
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.6e-10 Score=89.27 Aligned_cols=151 Identities=13% Similarity=0.030 Sum_probs=80.7
Q ss_pred CccEEEEcCCCCC--CChhhhhhhccCCCCCCCeEEecCCCcCCCCcee-------EeEeCCC----CCeEEEEE---Ec
Q 022941 80 DARFVINTSELGE--DDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ-------EQIRLPH----GEALDIIG---VN 143 (289)
Q Consensus 80 ~pdfvv~~GD~~~--~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~-------~~~~~p~----~~~~~~i~---lD 143 (289)
.=|.|++.||++- +-++-++.++.+..|+..-|.+.||||+|..... ...+..+ ..++.+++ .|
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG~K~m~rGNHDYWw~s~skl~n~lp~~l~~~n~~f~l~n~aI~G~RgW~ 122 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDLPGTKYMIRGNHDYWWSSISKLNNALPPILFYLNNGFELLNYAIVGVRGWD 122 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcCCCcEEEEecCCccccchHHHHHhhcCchHhhhccceeEeeEEEEEeeccc
Confidence 3489999999852 1111222234456676677999999996543210 0000111 11222222 12
Q ss_pred CCCccCCCCCCCCCCcHHHHHHHHHHH-HhhcCC--CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEe
Q 022941 144 TGSLQGKIPTALPSASGDLLLNWLKSA-LEATNG--QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLS 220 (289)
Q Consensus 144 t~~~~~~~~~~~~~~~~~~Ql~WL~~~-L~~~~~--~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~ 220 (289)
|..+..+-.+.....+-..++..|+.. .++-++ ...||+.|+|+++..... ..+.+++++++|+.++.
T Consensus 123 s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~---------~~~sevlee~rv~~~ly 193 (230)
T COG1768 123 SPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP---------GPFSEVLEEGRVSKCLY 193 (230)
T ss_pred CCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC---------cchHHHHhhcceeeEEe
Confidence 221110001111112333344455442 222222 368999999999876431 24567889999999999
Q ss_pred CCCcc-ce-----ecCCCeEEEecC
Q 022941 221 KHGCI-KY-----SRQDSITYMENP 239 (289)
Q Consensus 221 GH~H~-~~-----~~~~gi~~i~~g 239 (289)
||.|. +. ....||.|+...
T Consensus 194 GHlHgv~~p~~~~s~v~Gi~y~Lva 218 (230)
T COG1768 194 GHLHGVPRPNIGFSNVRGIEYMLVA 218 (230)
T ss_pred eeccCCCCCCCCcccccCceEEEEe
Confidence 99998 42 234577776543
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.9e-10 Score=91.29 Aligned_cols=117 Identities=11% Similarity=0.095 Sum_probs=71.0
Q ss_pred HHHHHHHHHhhCCccEEEEcCCCCCCC-----hhhhhhhc----cCCC-----CCCCeEEecCCCcCCCCceeEeEeCCC
Q 022941 68 LLKQMEDVAKSYDARFVINTSELGEDD-----PLKQNATW----LFPS-----LKVPWYTTKASKEKEVGCFQEQIRLPH 133 (289)
Q Consensus 68 ~~~~l~~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~~----~~~~-----l~~P~~~v~GNHD~~~~~~~~~~~~p~ 133 (289)
..+.+....+..+||+|+++||+.... ..|.+..+ .+.. ..+|++.++||||...+
T Consensus 33 ~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~~---------- 102 (171)
T cd07384 33 MRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGYG---------- 102 (171)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCCC----------
Confidence 344555666778999999999985432 23443332 2321 16899999999992110
Q ss_pred CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh
Q 022941 134 GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF 213 (289)
Q Consensus 134 ~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~ 213 (289)
... .. ...++-+++. -|++.|.|.+. ++++.
T Consensus 103 ----------~~~-----------~~-~~~~~~f~~~--------fi~l~H~p~~~-------------------~~~~~ 133 (171)
T cd07384 103 ----------EVI-----------SF-PEVVDRFERY--------FILLTHIPLYR-------------------LLDTI 133 (171)
T ss_pred ----------Ccc-----------cc-HHHHHHHHhh--------heeEECCccHH-------------------HHhcc
Confidence 000 00 0111111111 19999999621 56777
Q ss_pred CCeEEEeCCCccce---ec--CCCeEEEecCCCCC
Q 022941 214 GVNTYLSKHGCIKY---SR--QDSITYMENPGLIE 243 (289)
Q Consensus 214 ~V~~vl~GH~H~~~---~~--~~gi~~i~~g~~~~ 243 (289)
+++++||||.|.+. .. .+++.-|+.++.+.
T Consensus 134 ~~~~~lsGH~H~~~~~~~~~~~~~~~ei~v~S~s~ 168 (171)
T cd07384 134 KPVLILSGHDHDQCEVVHSSKAGSVREITVKSFSW 168 (171)
T ss_pred CceEEEeCcccCCeEEEecCCCCCceEEeeccchh
Confidence 89999999999854 22 35677787777643
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=91.18 Aligned_cols=107 Identities=12% Similarity=0.098 Sum_probs=68.3
Q ss_pred HHHHHHHhhCCccEEEEcCCCCCCC-----hhhhhhhc----cCC-CCCCCeEEecCCCcCCCCceeEeEeCCCCCeEEE
Q 022941 70 KQMEDVAKSYDARFVINTSELGEDD-----PLKQNATW----LFP-SLKVPWYTTKASKEKEVGCFQEQIRLPHGEALDI 139 (289)
Q Consensus 70 ~~l~~~~~~~~pdfvv~~GD~~~~~-----~~~~~~~~----~~~-~l~~P~~~v~GNHD~~~~~~~~~~~~p~~~~~~~ 139 (289)
+......+..+||+|+++||+.+.+ .+|.+.++ +|. ...+|++.+||||| ..+. +
T Consensus 32 r~~~~a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHD-IG~~-----------~--- 96 (195)
T cd08166 32 KTYHLALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDND-IGGE-----------E--- 96 (195)
T ss_pred HHHHHHHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCC-cCCC-----------C---
Confidence 3344445667999999999985432 23444332 332 23789999999999 2110 0
Q ss_pred EEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEE
Q 022941 140 IGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYL 219 (289)
Q Consensus 140 i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl 219 (289)
....++-++..++.. |++.|.|+...+.. .+..++.++.++++|
T Consensus 97 -----------------~~~~~~~v~RF~~~F--------i~lsH~P~~~~~~~-----------~~~~~~~~~~p~~If 140 (195)
T cd08166 97 -----------------EDPIESKIRRFEKYF--------IMLSHVPLLAEGGQ-----------ALKHVVTDLDPDLIF 140 (195)
T ss_pred -----------------CCcCHHHHHHHHHhh--------eeeecccccccccH-----------HHHHHHHhcCceEEE
Confidence 001122233334333 99999999775431 456778889999999
Q ss_pred eCCCccce
Q 022941 220 SKHGCIKY 227 (289)
Q Consensus 220 ~GH~H~~~ 227 (289)
+||.|.+.
T Consensus 141 s~H~H~s~ 148 (195)
T cd08166 141 SAHRHKSS 148 (195)
T ss_pred EcCcccee
Confidence 99999964
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-09 Score=100.72 Aligned_cols=182 Identities=15% Similarity=0.186 Sum_probs=106.0
Q ss_pred HHHHHHHHHhhCC-ccEEEEcCCCCCCChhhhhh----h-------ccCCC-C-CCCeEEecCCCcCCCCce------eE
Q 022941 68 LLKQMEDVAKSYD-ARFVINTSELGEDDPLKQNA----T-------WLFPS-L-KVPWYTTKASKEKEVGCF------QE 127 (289)
Q Consensus 68 ~~~~l~~~~~~~~-pdfvv~~GD~~~~~~~~~~~----~-------~~~~~-l-~~P~~~v~GNHD~~~~~~------~~ 127 (289)
+..+|..+.+..+ +|||+.+||....+ .|... + +.+.+ + .+|+|+..||||...-+. ..
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~-~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~ 275 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHD-VWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPK 275 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCccc-chhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcc
Confidence 3445555555555 99999999986544 23211 1 11111 1 789999999999432111 00
Q ss_pred -------------eE--eCC--------C--------CCeEEEEEEcCCCccCCC-CCCCCCCcHHHHHHHHHHHHhhcC
Q 022941 128 -------------QI--RLP--------H--------GEALDIIGVNTGSLQGKI-PTALPSASGDLLLNWLKSALEATN 175 (289)
Q Consensus 128 -------------~~--~~p--------~--------~~~~~~i~lDt~~~~~~~-~~~~~~~~~~~Ql~WL~~~L~~~~ 175 (289)
.| .+| . .++.++|.||+....... +-.........|++|+..+|..+.
T Consensus 276 ~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae 355 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE 355 (577)
T ss_pred hhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH
Confidence 01 112 0 267999999998654311 101112455678999999999765
Q ss_pred --CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhC--CeEEEeCCCcc-ce----ecCCC----eEEEecCCCC
Q 022941 176 --GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFG--VNTYLSKHGCI-KY----SRQDS----ITYMENPGLI 242 (289)
Q Consensus 176 --~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~--V~~vl~GH~H~-~~----~~~~g----i~~i~~g~~~ 242 (289)
...+=|++|.|+...... ......+..++.++. +...|.||.|. +. .+..+ +-|+..+-..
T Consensus 356 ~~GekVhil~HIPpG~~~c~------~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~v~yde~~~~p~~v~~i~~svtt 429 (577)
T KOG3770|consen 356 SAGEKVHILGHIPPGDGVCL------EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFRVFYDEETGHPIAVAYIGPSVTT 429 (577)
T ss_pred hcCCEEEEEEeeCCCCcchh------hhhhHHHHHHHHHHHHhhhhhccccCcceeEEEEeccccCCceeeeecccccee
Confidence 347889999998663332 122344556677773 56789999998 43 12222 2333211111
Q ss_pred CCCCCcccCCcEEEEEEe
Q 022941 243 ESGNGREMVDGFLLHKVS 260 (289)
Q Consensus 243 ~~~~g~~~~~gf~~v~v~ 260 (289)
. ....+||.+..++
T Consensus 430 y----~~~~p~yr~y~~~ 443 (577)
T KOG3770|consen 430 Y----YNKNPGYRIYAVD 443 (577)
T ss_pred h----hccCCCceecccC
Confidence 1 3457788877776
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=94.11 Aligned_cols=70 Identities=14% Similarity=0.178 Sum_probs=42.5
Q ss_pred EEEEEeCCCCCChhH---HHHHHHHHHHHhhCCccEEEEcCCCCCC----C---hhhhhhhccC---CCCCCCeEEecCC
Q 022941 51 YFISVTGGFRPLEQQ---TLLLKQMEDVAKSYDARFVINTSELGED----D---PLKQNATWLF---PSLKVPWYTTKAS 117 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~---~~~~~~l~~~~~~~~pdfvv~~GD~~~~----~---~~~~~~~~~~---~~l~~P~~~v~GN 117 (289)
+++++||.|.+.... ..+.+.+.. ...+||.|+++||+.+. + +......+.+ ...++|+|.++||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~--~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GN 79 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRG--EARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGN 79 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHh--hhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 689999988665322 233333322 23579999999997431 1 1112222333 3335899999999
Q ss_pred CcCCC
Q 022941 118 KEKEV 122 (289)
Q Consensus 118 HD~~~ 122 (289)
||.+.
T Consensus 80 HD~~~ 84 (241)
T PRK05340 80 RDFLL 84 (241)
T ss_pred Cchhh
Confidence 99543
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=94.62 Aligned_cols=68 Identities=16% Similarity=0.181 Sum_probs=40.4
Q ss_pred EEEeCCCCCChhH---HHHHHHHHHHHhhCCccEEEEcCCCCCC----C--hh-hhhhhc---cCCCCCCCeEEecCCCc
Q 022941 53 ISVTGGFRPLEQQ---TLLLKQMEDVAKSYDARFVINTSELGED----D--PL-KQNATW---LFPSLKVPWYTTKASKE 119 (289)
Q Consensus 53 ~~~gD~~~g~~~~---~~~~~~l~~~~~~~~pdfvv~~GD~~~~----~--~~-~~~~~~---~~~~l~~P~~~v~GNHD 119 (289)
++++|.|.+.... ..+.+.+.+.. .+||+|+++||+... + .. .+...+ .+...++|+|.++||||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~--~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEA--RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhh--ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 5789988765322 23334443322 279999999997431 1 11 111222 23334689999999999
Q ss_pred CCC
Q 022941 120 KEV 122 (289)
Q Consensus 120 ~~~ 122 (289)
++.
T Consensus 80 ~~~ 82 (231)
T TIGR01854 80 FLI 82 (231)
T ss_pred hhh
Confidence 543
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-08 Score=94.75 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=45.8
Q ss_pred EEEEEEeCCCCCC---------hhHHHHHHHHHHHHhhCCccEEEEcCCCCCC-Ch------hhhhhhccCCCCCCCeEE
Q 022941 50 FYFISVTGGFRPL---------EQQTLLLKQMEDVAKSYDARFVINTSELGED-DP------LKQNATWLFPSLKVPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~---------~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~-~~------~~~~~~~~~~~l~~P~~~ 113 (289)
+||++++|.|.|. ..+......+...+.+.++||||++||+-.. .+ .+.+.++.+...++|+|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 4899999987772 1222333334445667889999999998432 22 122222334556799999
Q ss_pred ecCCCc
Q 022941 114 TKASKE 119 (289)
Q Consensus 114 v~GNHD 119 (289)
++||||
T Consensus 81 I~GNHD 86 (390)
T COG0420 81 IAGNHD 86 (390)
T ss_pred ecCCCC
Confidence 999999
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-08 Score=89.65 Aligned_cols=71 Identities=10% Similarity=0.005 Sum_probs=47.0
Q ss_pred EEEEEEeCCCCCChh--------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC--hh--hhhh-----hccCCCCCCCeE
Q 022941 50 FYFISVTGGFRPLEQ--------QTLLLKQMEDVAKSYDARFVINTSELGEDD--PL--KQNA-----TWLFPSLKVPWY 112 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~--------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~--~~--~~~~-----~~~~~~l~~P~~ 112 (289)
+||+++||.|.|... +....+.+.+.+.+.+||+|+++||+-... +. -..+ ++.+...++|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 489999997776421 334455555566778999999999984321 11 1111 122344579999
Q ss_pred EecCCCcC
Q 022941 113 TTKASKEK 120 (289)
Q Consensus 113 ~v~GNHD~ 120 (289)
.++||||.
T Consensus 81 ~I~GNHD~ 88 (340)
T PHA02546 81 VLVGNHDM 88 (340)
T ss_pred EEccCCCc
Confidence 99999994
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.8e-08 Score=84.90 Aligned_cols=98 Identities=8% Similarity=-0.030 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce-e-cCCCeEEEe
Q 022941 161 DLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY-S-RQDSITYME 237 (289)
Q Consensus 161 ~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~-~-~~~gi~~i~ 237 (289)
.+.+++..++|++...+.+|+++|-+....... ..........+.++ -+||++|+||.|... . ..+++.++.
T Consensus 169 ~~~~~~~v~~lr~~~~D~IIvl~H~g~~~~~~~-----~~~~~~~~~~la~~~~~vD~IlgGHsH~~~~~~~~~~~~v~q 243 (277)
T cd07410 169 VETAKKYVPKLRAEGADVVVVLAHGGFERDLEE-----SLTGENAAYELAEEVPGIDAILTGHQHRRFPGPTVNGVPVVQ 243 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCCcCCCccc-----ccCCccHHHHHHhcCCCCcEEEeCCCccccccCCcCCEEEEc
Confidence 345666667777656678999999887543210 00111122344455 389999999999854 3 456776666
Q ss_pred cCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 238 NPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 238 ~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
+|+-+ ..-|...++++.+.=+++..+
T Consensus 244 ~g~~g-------~~vg~l~l~~~~~~~~~~i~~ 269 (277)
T cd07410 244 PGNWG-------SHLGVIDLTLEKDDGKWKVTD 269 (277)
T ss_pred CChhh-------CEEEEEEEEEEEcCCEEEEEe
Confidence 55432 235666666664432333333
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.5e-08 Score=86.33 Aligned_cols=70 Identities=9% Similarity=0.137 Sum_probs=45.6
Q ss_pred EEEEEEeCCCCCCh--------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h-hh-----hhhhccCCCCC-CCeEE
Q 022941 50 FYFISVTGGFRPLE--------QQTLLLKQMEDVAKSYDARFVINTSELGEDD-P-LK-----QNATWLFPSLK-VPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~~--------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~-~~-----~~~~~~~~~l~-~P~~~ 113 (289)
++|++++|.|.|.. .+....+.+.+.+.+.+||+|+++||+.... + .+ ......+.+.. +|++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 47999999766531 2334445555566677899999999985432 1 11 11122233344 89999
Q ss_pred ecCCCc
Q 022941 114 TKASKE 119 (289)
Q Consensus 114 v~GNHD 119 (289)
++||||
T Consensus 81 i~GNHD 86 (253)
T TIGR00619 81 ISGNHD 86 (253)
T ss_pred EccCCC
Confidence 999999
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.7e-07 Score=78.05 Aligned_cols=171 Identities=8% Similarity=0.065 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhhCCcc-EEEEcCCCCCCChh--h---hhhhccCCCCCCCeEEecCCCcCCCCc--e------------
Q 022941 66 TLLLKQMEDVAKSYDAR-FVINTSELGEDDPL--K---QNATWLFPSLKVPWYTTKASKEKEVGC--F------------ 125 (289)
Q Consensus 66 ~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~--~---~~~~~~~~~l~~P~~~v~GNHD~~~~~--~------------ 125 (289)
.+++..+.+.. +.+|+ +++.+||+....+. + +...+.++.++.. +.++||||+..+. +
T Consensus 24 ~rl~~~i~~~r-~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~d-~~~~GNHefd~g~~~l~~~~~~~~~~~L 101 (257)
T cd07406 24 ARFATLRKQLR-KENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGVD-LACFGNHEFDFGEDQLQKRLGESKFPWL 101 (257)
T ss_pred HHHHHHHHHHH-hcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCCc-EEeecccccccCHHHHHHHHhhCCCCEE
Confidence 34444454443 34567 99999997543321 1 1122345555543 6689999953321 0
Q ss_pred eEeEe----------C-C------CCCeEEEEEEcCCCccCCCCCCC----CCCcHHHHHHHHHHHHhhcCCCeEEEEee
Q 022941 126 QEQIR----------L-P------HGEALDIIGVNTGSLQGKIPTAL----PSASGDLLLNWLKSALEATNGQWCIVVGF 184 (289)
Q Consensus 126 ~~~~~----------~-p------~~~~~~~i~lDt~~~~~~~~~~~----~~~~~~~Ql~WL~~~L~~~~~~~~iV~~H 184 (289)
.+.+. . | ++-.+-|+++.+........... .....+.-.+|+ +.+++...+.+|++.|
T Consensus 102 ~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v-~~~~~~~~D~iVvl~H 180 (257)
T cd07406 102 SSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYRDYVETARELV-DELREQGADLIIALTH 180 (257)
T ss_pred EEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEcCHHHHHHHHH-HHHHhCCCCEEEEEec
Confidence 00000 0 1 13345567665543221100000 112223333455 3455556788999999
Q ss_pred ccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCc
Q 022941 185 HPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSL 262 (289)
Q Consensus 185 hP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~ 262 (289)
-+... + . +++++. +||++|+||.|... ...+++..+.+|+-+. .-|-..++++.+
T Consensus 181 ~g~~~--------d-~-------~la~~~~~iD~IlgGH~H~~~~~~~~~t~vv~~g~~g~-------~vg~l~l~~~~~ 237 (257)
T cd07406 181 MRLPN--------D-K-------RLAREVPEIDLILGGHDHEYILVQVGGTPIVKSGSDFR-------TVYIITLTYDTK 237 (257)
T ss_pred cCchh--------h-H-------HHHHhCCCCceEEecccceeEeeeECCEEEEeCCcCcc-------eEEEEEEEEECC
Confidence 87521 0 1 233333 79999999999955 4456666666554432 344445555543
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-08 Score=86.61 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCC
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPG 240 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~ 240 (289)
.+.+..++++++++.+++||+|... ...+++.|+.+|+
T Consensus 178 ~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~n~G~ 216 (217)
T cd07398 178 EEAVARLARRKGVDGVICGHTHRPALHELDGKLYINLGD 216 (217)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCeEEECCEEEEECCC
Confidence 4556667788899999999999965 5556888888775
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-08 Score=80.51 Aligned_cols=40 Identities=10% Similarity=-0.031 Sum_probs=28.3
Q ss_pred CCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 79 YDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 79 ~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
.++|.|+++||+......- ...+.+..++.|++.|+||||
T Consensus 41 ~~~d~vi~~GDl~~~~~~~-~~~~~l~~~~~~~~~v~GNHD 80 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAG-TELELLSRLNGRKHLIKGNHD 80 (168)
T ss_pred CCCCEEEEeCCCCCCCChH-HHHHHHHhCCCCeEEEeCCCC
Confidence 3689999999986543211 113344556779999999999
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-06 Score=75.16 Aligned_cols=199 Identities=10% Similarity=0.118 Sum_probs=100.3
Q ss_pred EEEEEEeCCCCCCh-------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhhccCCCCCCCeEEecCC
Q 022941 50 FYFISVTGGFRPLE-------QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNATWLFPSLKVPWYTTKAS 117 (289)
Q Consensus 50 ~~f~~~gD~~~g~~-------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~~~~~~l~~P~~~v~GN 117 (289)
++++.++|.|.... .-.+++..+++..++ ++++++.+||.....+.. +...+.+..++..+ .++||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~d~-~~~GN 78 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGYDA-VTPGN 78 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCCcE-Ecccc
Confidence 47888899543111 123344445444333 678999999975433211 11123455556555 56899
Q ss_pred CcCCCCce--------------eEe---------EeCC------C-CCeEEEEEEcCCCccC-CCCCCCCC----CcHHH
Q 022941 118 KEKEVGCF--------------QEQ---------IRLP------H-GEALDIIGVNTGSLQG-KIPTALPS----ASGDL 162 (289)
Q Consensus 118 HD~~~~~~--------------~~~---------~~~p------~-~~~~~~i~lDt~~~~~-~~~~~~~~----~~~~~ 162 (289)
||+..|.- .+. +..| + +-.+-++++-+..... ..+....+ ...++
T Consensus 79 Hefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~~~~ 158 (257)
T cd07408 79 HEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDPIEE 158 (257)
T ss_pred ccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecHHHH
Confidence 99543310 000 0011 1 3345566665432111 11111001 11122
Q ss_pred HHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce-e---cCCCeEEEe
Q 022941 163 LLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY-S---RQDSITYME 237 (289)
Q Consensus 163 Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~-~---~~~gi~~i~ 237 (289)
-.+|+.+.+++...+-+|++.|-+....... ... ..+.++ .+||++|.||.|... . ..+++..+.
T Consensus 159 ~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~---~~~-------~~la~~~~giDvIigGH~H~~~~~~~~~~~~~~ivq 228 (257)
T cd07408 159 AKKVIVAALKAKGADVIVALGHLGVDRTSSP---WTS-------TELAANVTGIDLIIDGHSHTTIEIGKKDGNNVLLTQ 228 (257)
T ss_pred HHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC---ccH-------HHHHHhCCCceEEEeCCCcccccCcccccCCeEEEc
Confidence 2233244555556788999999887554211 011 122333 389999999999954 2 246666655
Q ss_pred cCCCCCCCCCcccCCcEEEEEEeCcEEEEE
Q 022941 238 NPGLIESGNGREMVDGFLLHKVSSLEILTY 267 (289)
Q Consensus 238 ~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~ 267 (289)
+|.-+ ..-|...+++++++..+.
T Consensus 229 ~g~~g-------~~vg~l~l~~~~~~~~~~ 251 (257)
T cd07408 229 TGAYL-------ANIGEVTLVFDTTTGTIK 251 (257)
T ss_pred CChHH-------ceEEEEEEEEECCCceEE
Confidence 44432 245555666666544443
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=4e-07 Score=79.78 Aligned_cols=172 Identities=9% Similarity=-0.011 Sum_probs=87.8
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHh--hCCccEEEEcCCCCCC----Ch----------hhhhhhccC---CCCCCCeE
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAK--SYDARFVINTSELGED----DP----------LKQNATWLF---PSLKVPWY 112 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~--~~~pdfvv~~GD~~~~----~~----------~~~~~~~~~---~~l~~P~~ 112 (289)
++|+||.|. .-..+.+.+....+ ..++|+||++||.+.. +. .+..+.+.+ ...++|++
T Consensus 1 i~v~Gd~HG---~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~ 77 (262)
T cd00844 1 IAVEGCCHG---ELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTI 77 (262)
T ss_pred CEEEecCCc---cHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEE
Confidence 478899654 12233333333322 3579999999997421 11 111111223 33577889
Q ss_pred EecCCCcCCCCcee---------Ee-EeCCC-----CCeEEEEEEcCCCccCCCCCCC--CCCcHHHHHHHH-------H
Q 022941 113 TTKASKEKEVGCFQ---------EQ-IRLPH-----GEALDIIGVNTGSLQGKIPTAL--PSASGDLLLNWL-------K 168 (289)
Q Consensus 113 ~v~GNHD~~~~~~~---------~~-~~~p~-----~~~~~~i~lDt~~~~~~~~~~~--~~~~~~~Ql~WL-------~ 168 (289)
.|.||||. ...+. .. +.+-. -+++++.++-...-...+.... .....+.++..+ -
T Consensus 78 fi~GNHE~-~~~l~~l~~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~ 156 (262)
T cd00844 78 FIGGNHEA-SNYLWELPYGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEV 156 (262)
T ss_pred EECCCCCC-HHHHHhhcCCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHH
Confidence 99999993 21111 00 11111 1446666664322111111110 012233443321 1
Q ss_pred HHHhhcCCCeEEEEeeccccccccccchh-----------hH---HhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 169 SALEATNGQWCIVVGFHPLVICEEHEEQL-----------EA---KKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 169 ~~L~~~~~~~~iV~~HhP~~~~~~~~~~~-----------~~---~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
+.|.....+.-|+++|.||.....++... +. ..-...+..++++.+-+..||||.|..+
T Consensus 157 ~kl~~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f 229 (262)
T cd00844 157 FKLKQLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKF 229 (262)
T ss_pred HHHHhcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCccc
Confidence 12333233456999999998876542110 00 0012457788999999999999999943
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.8e-06 Score=75.30 Aligned_cols=188 Identities=11% Similarity=0.057 Sum_probs=92.6
Q ss_pred EEEEEEeCCCCCC------hhHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-----hhhhccCCCCCCCeEEecCC
Q 022941 50 FYFISVTGGFRPL------EQQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-----QNATWLFPSLKVPWYTTKAS 117 (289)
Q Consensus 50 ~~f~~~gD~~~g~------~~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-----~~~~~~~~~l~~P~~~v~GN 117 (289)
+++++++|.|... ....++...++++. +..|| +++.+||........ +...+.+..++ +-+.++||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~-~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g-~d~~~~GN 78 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEER-AENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG-YDAVTIGN 78 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHH-hcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC-CCEEeecc
Confidence 5789999965221 12344444454443 34677 889999974332211 11123344444 34678899
Q ss_pred CcCCCCc--e------------eEeEe-----------CC------CCCeEEEEEEcCCCccCC-CCCCCCCCcHHHHHH
Q 022941 118 KEKEVGC--F------------QEQIR-----------LP------HGEALDIIGVNTGSLQGK-IPTALPSASGDLLLN 165 (289)
Q Consensus 118 HD~~~~~--~------------~~~~~-----------~p------~~~~~~~i~lDt~~~~~~-~~~~~~~~~~~~Ql~ 165 (289)
||+..+. + .+.+. .| ++..+-|+++.+...... .+............+
T Consensus 79 He~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd00845 79 HEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFEDLAE 158 (252)
T ss_pred ccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecCHHH
Confidence 9943221 0 01110 00 123355666654332110 010000000011112
Q ss_pred HHHH--HHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce-e--cCCCeEEEecC
Q 022941 166 WLKS--ALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY-S--RQDSITYMENP 239 (289)
Q Consensus 166 WL~~--~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~-~--~~~gi~~i~~g 239 (289)
.+++ .+...+.+.+|++.|-|.... . .++++ .+||++|+||.|... . ..+++.++.+|
T Consensus 159 ~~~~~~~~~~~~~D~vIvl~H~g~~~~---------~-------~la~~~~giDlvlggH~H~~~~~~~~~~~~~v~~~g 222 (252)
T cd00845 159 AVAVAEELLAEGADVIILLSHLGLDDD---------E-------ELAEEVPGIDVILGGHTHHLLEEPEVVNGTLIVQAG 222 (252)
T ss_pred HHHHHHHHHhCCCCEEEEEeccCccch---------H-------HHHhcCCCccEEEcCCcCcccCCCcccCCEEEEeCC
Confidence 2222 223345678999999876431 1 12222 489999999999844 2 45677777665
Q ss_pred CCCCCCCCcccCCcEEEEEEeCc
Q 022941 240 GLIESGNGREMVDGFLLHKVSSL 262 (289)
Q Consensus 240 ~~~~~~~g~~~~~gf~~v~v~~~ 262 (289)
.-+ ..-|...++++++
T Consensus 223 ~~~-------~~~~~~~l~~~~~ 238 (252)
T cd00845 223 KYG-------KYVGEIDLELDDD 238 (252)
T ss_pred hhH-------ceEEEEEEEEECC
Confidence 432 2344455555544
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-08 Score=83.38 Aligned_cols=175 Identities=11% Similarity=0.048 Sum_probs=90.2
Q ss_pred EEeCCCCCChhHHHHHHHHHHHHhhC--CccEEEEcCCCCC---CChhhhhhh----cc---CCCCCCCeEEecCCCcCC
Q 022941 54 SVTGGFRPLEQQTLLLKQMEDVAKSY--DARFVINTSELGE---DDPLKQNAT----WL---FPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 54 ~~gD~~~g~~~~~~~~~~l~~~~~~~--~pdfvv~~GD~~~---~~~~~~~~~----~~---~~~l~~P~~~v~GNHD~~ 121 (289)
.++|-|.+... ....+.+.+..+.. ..|-+.++||+.+ .+..|.+.. .. +..-+.|+|.++||||+.
T Consensus 2 FISDlHL~~~~-p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 2 FISDLHLGPKR-PALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDFL 80 (237)
T ss_pred eeeccccCCCC-cHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHHH
Confidence 57897766321 22333344444443 4499999999732 111232221 11 233478999999999955
Q ss_pred CCceeEe-E----eCCC-----CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecccc---
Q 022941 122 VGCFQEQ-I----RLPH-----GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLV--- 188 (289)
Q Consensus 122 ~~~~~~~-~----~~p~-----~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~--- 188 (289)
.++...+ + -.|+ ..+-+++.+-.-.+. ....+.+|++..-... --..+|.+.|+.
T Consensus 81 l~~~f~~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~----------t~~~~y~~~r~~~~~~--~~~~lflnl~l~~R~ 148 (237)
T COG2908 81 LGKRFAQEAGGMTLLPDPIVLDLYGKRILLAHGDTFC----------TDDRAYQWFRYKVHWA--WLQLLFLNLPLRVRR 148 (237)
T ss_pred HHHHHHhhcCceEEcCcceeeeecCcEEEEEeCCccc----------chHHHHHHHHHHcccH--HHHHHHHHhHHHHHH
Confidence 4543221 1 1222 112223333221111 2234555654322211 112334444443
Q ss_pred -------ccccccch--hh----HHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 189 -------ICEEHEEQ--LE----AKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 189 -------~~~~~~~~--~~----~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
+....... .. .....+...+.+++++|+.++|||+|... ...+++.|++.|+=
T Consensus 149 ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~lGdW 215 (237)
T COG2908 149 RIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYINLGDW 215 (237)
T ss_pred HHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEecCcc
Confidence 11100000 00 01224566777888999999999999966 77778999998873
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.8e-08 Score=80.77 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=29.6
Q ss_pred HhhCCccEEEEcCCCCC----CChhhhhhh----ccC-CC-C----------------CCCeEEecCCCc
Q 022941 76 AKSYDARFVINTSELGE----DDPLKQNAT----WLF-PS-L----------------KVPWYTTKASKE 119 (289)
Q Consensus 76 ~~~~~pdfvv~~GD~~~----~~~~~~~~~----~~~-~~-l----------------~~P~~~v~GNHD 119 (289)
....+||.|+++||+-. .|.+|.+.+ +++ .. . ++|++.++||||
T Consensus 40 ~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 40 QFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 34579999999999732 344554432 233 11 1 489999999999
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.8e-06 Score=70.72 Aligned_cols=172 Identities=12% Similarity=0.105 Sum_probs=91.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCcCCCCceeE--
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKEKEVGCFQE-- 127 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~-- 127 (289)
|++++||. .|...-..+.+.+.++.++.++||++..||+..... .-....+.+..+++-+ .+.|||++..+...+
T Consensus 1 ~ilfigdi-~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D~-iTlGNH~fD~gel~~~l 78 (255)
T cd07382 1 KILFIGDI-VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVDV-ITMGNHTWDKKEILDFI 78 (255)
T ss_pred CEEEEEeC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCCE-EEecccccCcchHHHHH
Confidence 57889992 233334456666777666778999999999754331 1123344455555554 455999965553211
Q ss_pred --------eEeCCC-------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 022941 128 --------QIRLPH-------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHP 186 (289)
Q Consensus 128 --------~~~~p~-------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP 186 (289)
.-++|. +..+-++.+-+..+.. +. ...-+.++.+-++|++ ..+.+||.+|--
T Consensus 79 ~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~-----~~-~~P~~~~~~~v~~lk~-~~D~IIV~~H~g 151 (255)
T cd07382 79 DEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMP-----PL-DNPFRAADELLEELKE-EADIIFVDFHAE 151 (255)
T ss_pred hcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCC-----cC-CCHHHHHHHHHHHHhc-CCCEEEEEECCC
Confidence 012221 1122333332211110 11 1112223333344554 457889999974
Q ss_pred ccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce---ec-CCCeEEEecCCCCCC
Q 022941 187 LVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY---SR-QDSITYMENPGLIES 244 (289)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~---~~-~~gi~~i~~g~~~~~ 244 (289)
..+ +. .++.. .-.-+||+++.||.|.+. +- .+|+-|++.-+.+++
T Consensus 152 ~ts----------Ek--~ala~-~ldg~VdvIvGtHTHv~t~d~~il~~gTa~itd~Gm~G~ 200 (255)
T cd07382 152 ATS----------EK--IALGW-YLDGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGP 200 (255)
T ss_pred CCH----------HH--HHHHH-hCCCCceEEEeCCCCccCCccEEeeCCeEEEecCccccC
Confidence 210 10 11111 112259999999999965 22 388999988665544
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-05 Score=70.47 Aligned_cols=74 Identities=14% Similarity=0.050 Sum_probs=43.7
Q ss_pred HHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce-e---cCCCeEEEecCCCC
Q 022941 168 KSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY-S---RQDSITYMENPGLI 242 (289)
Q Consensus 168 ~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~-~---~~~gi~~i~~g~~~ 242 (289)
.+.+++...+.+|++.|-+.... . .+.++ .+||++|+||.|... . ..+++.++.+|.-+
T Consensus 176 ~~~~~~~~~D~iI~l~H~g~~~~---------~-------~la~~~~~iDlilgGH~H~~~~~~~~~~~~t~v~~~g~~~ 239 (264)
T cd07411 176 VKLRREEGVDVVVLLSHNGLPVD---------V-------ELAERVPGIDVILSGHTHERTPKPIIAGGGTLVVEAGSHG 239 (264)
T ss_pred HHHHHhCCCCEEEEEecCCchhh---------H-------HHHhcCCCCcEEEeCcccccccCcccccCCEEEEEcCccc
Confidence 43344445678999999875210 1 22333 379999999999733 2 24677666655543
Q ss_pred CCCCCcccCCcEEEEEEeCcEE
Q 022941 243 ESGNGREMVDGFLLHKVSSLEI 264 (289)
Q Consensus 243 ~~~~g~~~~~gf~~v~v~~~~i 264 (289)
. .-|-..++++++++
T Consensus 240 ~-------~vg~i~l~~~~~~i 254 (264)
T cd07411 240 K-------FLGRLDLDVRDGKI 254 (264)
T ss_pred c-------EEEEEEEEEECCEE
Confidence 2 34555555655543
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.5e-05 Score=71.14 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=41.9
Q ss_pred HHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH--hCCeEEEeCCCccce-e---cCCCeEEEecCC
Q 022941 167 LKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK--FGVNTYLSKHGCIKY-S---RQDSITYMENPG 240 (289)
Q Consensus 167 L~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~--~~V~~vl~GH~H~~~-~---~~~gi~~i~~g~ 240 (289)
.-++|++...+.+|++.|-......... ...........++.+ -+||++|+||.|... . ..+++.++.+|+
T Consensus 183 ~v~~lr~~~~D~IIvL~H~G~~~~~~~~---~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~~~~~~~v~q~g~ 259 (288)
T cd07412 183 VAPELKAGGVDAIVVLAHEGGSTKGGDD---TCSAASGPIADIVNRLDPDVDVVFAGHTHQAYNCTVPAGNPRLVTQAGS 259 (288)
T ss_pred HHHHHHHCCCCEEEEEeCCCCCCCCCCc---cccccChhHHHHHhhcCCCCCEEEeCccCccccccccCcCCEEEEecCh
Confidence 3345665456789999998765432210 000011122334444 379999999999954 3 456777776655
Q ss_pred C
Q 022941 241 L 241 (289)
Q Consensus 241 ~ 241 (289)
-
T Consensus 260 ~ 260 (288)
T cd07412 260 Y 260 (288)
T ss_pred h
Confidence 4
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-06 Score=81.93 Aligned_cols=70 Identities=4% Similarity=0.035 Sum_probs=47.6
Q ss_pred EEEEEEeCCCCCCh--------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCC--hhhh-h----hhccCCCCCCCeEEe
Q 022941 50 FYFISVTGGFRPLE--------QQTLLLKQMEDVAKSYDARFVINTSELGEDD--PLKQ-N----ATWLFPSLKVPWYTT 114 (289)
Q Consensus 50 ~~f~~~gD~~~g~~--------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~--~~~~-~----~~~~~~~l~~P~~~v 114 (289)
+||++++|.|.|.. .+..+.+.+.+.+++.+||+||++||+.... +.+. . +...+..+++|++.+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 48999999776631 2344455666666778999999999985432 1121 1 112344567999999
Q ss_pred cCCCc
Q 022941 115 KASKE 119 (289)
Q Consensus 115 ~GNHD 119 (289)
+||||
T Consensus 81 ~GNHD 85 (407)
T PRK10966 81 AGNHD 85 (407)
T ss_pred cCCCC
Confidence 99999
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.9e-05 Score=66.55 Aligned_cols=69 Identities=20% Similarity=0.287 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCe-EEEeCCCccce--ecCCCeEEEec
Q 022941 163 LLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVN-TYLSKHGCIKY--SRQDSITYMEN 238 (289)
Q Consensus 163 Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~-~vl~GH~H~~~--~~~~gi~~i~~ 238 (289)
+..|+.+.|++...+-+|++.|-........ ... ...+.++. ++| ++|+||.|... ...+++..+.+
T Consensus 175 ~~~~v~~~l~~~~~DvIIvlsH~G~~~d~~~------~~~---~~~la~~~~~id~~Ii~GHsH~~~~~~~~~~~~ivq~ 245 (282)
T cd07407 175 QEPWFQDAINNEDVDLILVLGHMPVRDDAEF------KVL---HDAIRKIFPDTPIQFLGGHSHVRDFTQYDSSSTGLES 245 (282)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCCCCCccH------HHH---HHHHHHhCCCCCEEEEeCCcccccceeccCcEEEEec
Confidence 3358888887556788999999887543211 111 11233444 577 79999999733 23356655554
Q ss_pred CC
Q 022941 239 PG 240 (289)
Q Consensus 239 g~ 240 (289)
|.
T Consensus 246 G~ 247 (282)
T cd07407 246 GR 247 (282)
T ss_pred cc
Confidence 44
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=9e-05 Score=72.05 Aligned_cols=174 Identities=10% Similarity=0.047 Sum_probs=84.7
Q ss_pred CCccEEEEEEeCCCCCCh-------hHHHHHHHHHHHHh---h-CCccEEEEcCCCCCCChh--h---hhhhccCCCCCC
Q 022941 46 KGLDFYFISVTGGFRPLE-------QQTLLLKQMEDVAK---S-YDARFVINTSELGEDDPL--K---QNATWLFPSLKV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~-------~~~~~~~~l~~~~~---~-~~pdfvv~~GD~~~~~~~--~---~~~~~~~~~l~~ 109 (289)
...+++++.+.|.|.-.. .-.+++..+++.-+ + .+.-+++..||.....+. + +...+.+..++.
T Consensus 31 ~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~ 110 (551)
T PRK09558 31 KTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY 110 (551)
T ss_pred CceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC
Confidence 357899999999432111 12233344443321 1 234688999996432221 1 111234555554
Q ss_pred CeEEecCCCcCCCCce--------------eEe---------EeCC------CCCeEEEEEEcCCCccCC-CCCCCCC--
Q 022941 110 PWYTTKASKEKEVGCF--------------QEQ---------IRLP------HGEALDIIGVNTGSLQGK-IPTALPS-- 157 (289)
Q Consensus 110 P~~~v~GNHD~~~~~~--------------~~~---------~~~p------~~~~~~~i~lDt~~~~~~-~~~~~~~-- 157 (289)
- ..++||||+..|.- .+. +..| ++-.+-||++-+...... .+....+
T Consensus 111 D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~~~~~ 189 (551)
T PRK09558 111 D-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYFTDIE 189 (551)
T ss_pred C-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCCcCCce
Confidence 4 46679999654420 000 0011 133455666643321110 1110001
Q ss_pred -CcHHHHHHHHHHHHhh-cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh---CCeEEEeCCCccc
Q 022941 158 -ASGDLLLNWLKSALEA-TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF---GVNTYLSKHGCIK 226 (289)
Q Consensus 158 -~~~~~Ql~WL~~~L~~-~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~---~V~~vl~GH~H~~ 226 (289)
....+..+-+-++|++ ...+-+|++.|-........... .... ..+.++. +||++|.||.|..
T Consensus 190 f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~--~~~d----~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 190 FRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGSN--APGD----VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred ECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCCC--CccH----HHHHHhCCccCceEEEeCCCCcc
Confidence 1223334444456664 35678999999887543221100 0000 2334444 7999999999974
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.3e-05 Score=74.06 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=46.7
Q ss_pred CCCccEEEEEEeCCCCCChh-HHHHHHHHHHHHh---------hCCccEEEEcCCCCCC-C--h-------------hhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQ-QTLLLKQMEDVAK---------SYDARFVINTSELGED-D--P-------------LKQ 98 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~-~~~~~~~l~~~~~---------~~~pdfvv~~GD~~~~-~--~-------------~~~ 98 (289)
....+.++++++|.|.|... .......+.++.+ ..+++.+|++||+... + + .++
T Consensus 239 ~~~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~ 318 (504)
T PRK04036 239 TKDEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYE 318 (504)
T ss_pred cCCCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHH
Confidence 34567899999998776532 2222334444444 5679999999997431 0 0 011
Q ss_pred hhhccCCCC--CCCeEEecCCCcC
Q 022941 99 NATWLFPSL--KVPWYTTKASKEK 120 (289)
Q Consensus 99 ~~~~~~~~l--~~P~~~v~GNHD~ 120 (289)
...+.+..+ .+|++.+|||||.
T Consensus 319 ~l~~~L~~L~~~i~V~~ipGNHD~ 342 (504)
T PRK04036 319 AAAEYLKQIPEDIKIIISPGNHDA 342 (504)
T ss_pred HHHHHHHhhhcCCeEEEecCCCcc
Confidence 111233444 5799999999993
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.9e-05 Score=78.86 Aligned_cols=186 Identities=11% Similarity=0.071 Sum_probs=95.5
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEE-cCCCCCCChhh-----hhhhccCCCCCCCeEEecCCCc
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVIN-TSELGEDDPLK-----QNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~-~GD~~~~~~~~-----~~~~~~~~~l~~P~~~v~GNHD 119 (289)
...++++++++|.|.......+++..+.++. +.+|+.+++ +||........ +...+.+..++. -+.++||||
T Consensus 657 ~~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r-~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-d~~~~GNHE 734 (1163)
T PRK09419 657 DNWELTILHTNDFHGHLDGAAKRVTKIKEVK-EENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-DASTFGNHE 734 (1163)
T ss_pred CceEEEEEEEeecccCCCCHHHHHHHHHHHH-hhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-CEEEecccc
Confidence 3467999999996532223344555555443 346777655 99974332211 112234455543 356999999
Q ss_pred CCCCc-----------------------e---eEeEe-----------CC------CCCeEEEEEEcCCCccC-CCCCCC
Q 022941 120 KEVGC-----------------------F---QEQIR-----------LP------HGEALDIIGVNTGSLQG-KIPTAL 155 (289)
Q Consensus 120 ~~~~~-----------------------~---~~~~~-----------~p------~~~~~~~i~lDt~~~~~-~~~~~~ 155 (289)
+..+. + .+.+. .| ++-.+-||++-+..... ..+...
T Consensus 735 fd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~~ 814 (1163)
T PRK09419 735 FDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGNV 814 (1163)
T ss_pred cccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCCc
Confidence 54321 0 00000 01 12234556664432111 111100
Q ss_pred CC---CcHHHHHHHHHHHHhh-cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ec
Q 022941 156 PS---ASGDLLLNWLKSALEA-TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SR 229 (289)
Q Consensus 156 ~~---~~~~~Ql~WL~~~L~~-~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~ 229 (289)
.+ ....+..+-.-++|++ ...+.+|++.|.........+ .....++.++. +||++|.||.|... ..
T Consensus 815 ~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~--------~~~~~~lA~~v~gIDvIigGHsH~~~~~~ 886 (1163)
T PRK09419 815 KNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG--------EITGLELAKKVKGVDAIISAHTHTLVDKV 886 (1163)
T ss_pred CCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc--------ccHHHHHHHhCCCCCEEEeCCCCcccccc
Confidence 01 1122223223345663 456789999999875432211 11233455544 79999999999955 44
Q ss_pred CCCeEEEecCCC
Q 022941 230 QDSITYMENPGL 241 (289)
Q Consensus 230 ~~gi~~i~~g~~ 241 (289)
.+++..+.+|+-
T Consensus 887 v~~~~ivqag~~ 898 (1163)
T PRK09419 887 VNGTPVVQAYKY 898 (1163)
T ss_pred CCCEEEEeCChh
Confidence 567766665543
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.4e-06 Score=77.69 Aligned_cols=92 Identities=17% Similarity=0.204 Sum_probs=64.3
Q ss_pred CeEEEEEEcCCCccCCCCC-------------CCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccc------
Q 022941 135 EALDIIGVNTGSLQGKIPT-------------ALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEE------ 195 (289)
Q Consensus 135 ~~~~~i~lDt~~~~~~~~~-------------~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~------ 195 (289)
.-+.+.+||+..+....+. .....++++|.+||+..|.++++.|.|+..-.|+-.....+.
T Consensus 300 ~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~SkatWnVia~q~~~~~~~~d~~~a~~~~ 379 (522)
T COG3540 300 PLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGASKATWNVIAQQMPLGLVVFDGSPATEGQ 379 (522)
T ss_pred cccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhcchhhhhhhhhcceeEeecCCCccccCc
Confidence 3457889999876621111 112367899999999999999999999988888743322110
Q ss_pred ------hhhHHhhHHHHHHHHHHhCCe--EEEeCCCccc
Q 022941 196 ------QLEAKKIYEPLHHIFMKFGVN--TYLSKHGCIK 226 (289)
Q Consensus 196 ------~~~~~~~~~~l~~ll~~~~V~--~vl~GH~H~~ 226 (289)
+.....-|++|+.+++..++. ++|.|.+|..
T Consensus 380 ~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 380 EANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred cccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 011223478999999999765 8899999983
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00024 Score=74.84 Aligned_cols=53 Identities=6% Similarity=0.087 Sum_probs=33.9
Q ss_pred HHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 169 SALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 169 ~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
.+|++...+-+|++.|-......... ...+...++.++. +||+++.||.|...
T Consensus 228 ~~lk~~gaDvII~l~H~G~~~~~~~~------~~en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 228 PEMKKGGADVIVALAHSGIESEYQSS------GAEDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHhcCCCEEEEEeccCcCCCCCCC------CcchHHHHHHHhCCCCcEEEeCCCcccc
Confidence 45665567889999998875432210 1112234455454 89999999999954
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.8e-07 Score=75.53 Aligned_cols=140 Identities=12% Similarity=0.058 Sum_probs=64.0
Q ss_pred CCccEEEEcCCCCCCChhhhhhhccC-------CCCCCCeEEecCCCcCCCCceeEeEeCCCCCeEEEEEEcCCCccCCC
Q 022941 79 YDARFVINTSELGEDDPLKQNATWLF-------PSLKVPWYTTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKI 151 (289)
Q Consensus 79 ~~pdfvv~~GD~~~~~~~~~~~~~~~-------~~l~~P~~~v~GNHD~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~ 151 (289)
.+.|.++++||+...++.-.+..+.+ ...+.+++.++||||... ....+........ ..........
T Consensus 31 ~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~~--l~~~~~~~~~~~~----~~~~~~~~~~ 104 (208)
T cd07425 31 GGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELMN--LCGDFRYVHPKYF----NEFGGLAMRR 104 (208)
T ss_pred CCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHHH--HcchhccCChhHH----HHHHhhhhhH
Confidence 46899999999865443222222221 223578999999999321 1111111100000 0000000000
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccc--cccch-hhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 152 PTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICE--EHEEQ-LEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 152 ~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~--~~~~~-~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
........+..+||++.--...- ..++|.|--+.+.. ..... ....+-...+..+|+..+.+++++||+|...
T Consensus 105 --~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~~w~r~y~~~~~~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~ 180 (208)
T cd07425 105 --RELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGPLWYRGYSKETSDKECAAAHLDKVLERLGAKRMVVGHTPQEG 180 (208)
T ss_pred --HHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHHHHhhHhhhhhhhccchHHHHHHHHHHcCCCeEEEcCeeeec
Confidence 00001223446787642111111 13667787441111 01000 0000001246678888999999999999854
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00011 Score=64.41 Aligned_cols=175 Identities=11% Similarity=0.087 Sum_probs=94.7
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCcCCCCcee--
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKEKEVGCFQ-- 126 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~-- 126 (289)
.|++++||. .|......+.+.+.++.++.++||+|..||+...+. .-+..++.+..+++-++.+ |||.+..+...
T Consensus 1 m~ilfiGDi-~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvDviT~-GNH~~Dkge~~~~ 78 (266)
T TIGR00282 1 IKFLFIGDV-YGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVNYITM-GNHTWFQKLILDV 78 (266)
T ss_pred CeEEEEEec-CCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCCEEEc-cchhccCcHHHHH
Confidence 378999992 233334556666777777788999999999854321 1122234445556666666 99995444321
Q ss_pred ----EeE----eCCC---CCeEEE----------EEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeec
Q 022941 127 ----EQI----RLPH---GEALDI----------IGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFH 185 (289)
Q Consensus 127 ----~~~----~~p~---~~~~~~----------i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~Hh 185 (289)
.+. ..|. +.++.+ +.+-...+...+. .. ..-+..+.+-+.+++ +.+.+||.+|-
T Consensus 79 i~~~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~---~~-~Pf~~~d~~i~~lk~-~~d~IIVd~Ha 153 (266)
T TIGR00282 79 VINQKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFK---TT-NPFKVLKELINMLKK-DCDLIFVDFHA 153 (266)
T ss_pred HhccccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccc---cC-CHHHHHHHHHHhhhc-CCCEEEEEeCC
Confidence 111 2221 112222 2221111111110 11 111222223223443 24688888985
Q ss_pred cccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce---ec-CCCeEEEecCCCCCC
Q 022941 186 PLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY---SR-QDSITYMENPGLIES 244 (289)
Q Consensus 186 P~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~---~~-~~gi~~i~~g~~~~~ 244 (289)
-.-+ .+.....+-+-+|++|+.-|.|.+- +- .+|+-|++--+.+++
T Consensus 154 eats-------------EK~a~~~~ldg~vsaVvGtHtHV~TaD~~il~~gtayitD~Gm~G~ 203 (266)
T TIGR00282 154 ETTS-------------EKNAFGMAFDGYVTAVVGTHTHVPTADLRILPKGTAYITDVGMTGP 203 (266)
T ss_pred CCHH-------------HHHHHHHHhCCCccEEEeCCCCCCCCcceeCCCCCEEEecCCcccC
Confidence 4311 1233455666799999999999975 22 478999987665554
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00024 Score=68.52 Aligned_cols=201 Identities=12% Similarity=0.149 Sum_probs=101.3
Q ss_pred CCCCccEEEEEEeCCCCCCh------------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh------hhhhhhccCC
Q 022941 44 NRKGLDFYFISVTGGFRPLE------------QQTLLLKQMEDVAKSYDARFVINTSELGEDDP------LKQNATWLFP 105 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~------~~~~~~~~~~ 105 (289)
.....+++++...|.|.... ...+++..+++.-++.+..++|.+||+....+ ..+...+.+.
T Consensus 21 ~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN 100 (517)
T COG0737 21 AAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLN 100 (517)
T ss_pred ccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHh
Confidence 45689999999999443221 22234444444444455678999999643211 1111223444
Q ss_pred CCCCCeEEecCCCcCCCCc--e------------eEeE----------eCC------CCCeEEEEEEcCCCccC-CCCCC
Q 022941 106 SLKVPWYTTKASKEKEVGC--F------------QEQI----------RLP------HGEALDIIGVNTGSLQG-KIPTA 154 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~~--~------------~~~~----------~~p------~~~~~~~i~lDt~~~~~-~~~~~ 154 (289)
.++.- +.++||||+..|. + .+.+ .-| .+-.+-+|++.+..... ..+..
T Consensus 101 ~m~yD-a~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~~~ 179 (517)
T COG0737 101 ALGYD-AMTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKPNA 179 (517)
T ss_pred hcCCc-EEeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccccc
Confidence 44322 6899999965542 0 0111 111 12345667766422211 11110
Q ss_pred CCC---CcHHHHH-HHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--e
Q 022941 155 LPS---ASGDLLL-NWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--S 228 (289)
Q Consensus 155 ~~~---~~~~~Ql-~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~ 228 (289)
..+ ....+.+ +|+. +|++...+-+|++.|-+........... ..... ... .++|+++.||.|... .
T Consensus 180 ~~~~~f~d~~e~~~~~i~-elk~~~vD~iI~LsH~G~~~d~~~~~~~--~~~~~----~~~-~~iD~i~~GH~H~~~~~~ 251 (517)
T COG0737 180 IEGVTFRDPIEAAKKYIP-ELKGEGVDVIIALSHLGIEDDLELASEV--PGDVD----VAV-PGIDLIIGGHSHTVFPGG 251 (517)
T ss_pred cCCcEEcCHHHHHHHHHH-HHHhcCCCEEEEEeccCcCccccccccc--ccccc----ccc-cCcceEeccCCcccccCC
Confidence 111 1222222 3333 4554336789999999987654431100 00000 000 349999999999743 2
Q ss_pred ----cCCCeEEEecCCCCCCCCCcccCCcEEEEEEe
Q 022941 229 ----RQDSITYMENPGLIESGNGREMVDGFLLHKVS 260 (289)
Q Consensus 229 ----~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~ 260 (289)
..+++..+.+|.-++ .-|..-++++
T Consensus 252 ~~~~~~~~t~ivqag~~gk-------~vG~~di~~d 280 (517)
T COG0737 252 DKPGTVNGTPIVQAGEYGK-------YVGVLDITFD 280 (517)
T ss_pred cccCccCCEEEEccChhhC-------ceeEEEEEEc
Confidence 235666665554433 3555555555
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00028 Score=62.81 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=33.4
Q ss_pred HHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 165 NWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 165 ~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
+|++ +|++...+-+|++.|-........... ... ...+.+.+...+||++|.||.|...
T Consensus 164 ~~v~-~lk~~~~D~VI~lsH~G~~~~~~~~~~--~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 164 EVVP-ELKQEKPDIVIAATHMGHYDNGEHGSN--APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred HHHH-HHHHcCCCEEEEEecccccCCcccccc--Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 4443 466545678999999887543321100 000 0122222222489999999999843
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.1e-05 Score=60.07 Aligned_cols=113 Identities=6% Similarity=0.044 Sum_probs=63.1
Q ss_pred HHHHHhhCCc-cEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEeCCCCCeEEEEEEcCCCccCC
Q 022941 72 MEDVAKSYDA-RFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGK 150 (289)
Q Consensus 72 l~~~~~~~~p-dfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~ 150 (289)
+..+.+..+| |.+.++||++.....-+.+-++++.|+.....|+|||| ..+...+. .+.|+.
T Consensus 36 l~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerLnGrkhlv~GNhD-k~~~~~~~-----------~~~~sv----- 98 (186)
T COG4186 36 LSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERLNGRKHLVPGNHD-KCHPMYRH-----------AYFDSV----- 98 (186)
T ss_pred HHhHHhcCCccceEEEecccccccchhhHHHHHHHHcCCcEEEeeCCCC-CCcccccc-----------hhhHHH-----
Confidence 3445555566 68889999854221112223466778777899999999 22211100 001111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 151 IPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 151 ~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
+-++ .++ . +...|+++|.|..+....+ .+ ....-.+.++++.|.||.|.+.
T Consensus 99 -----------q~f~----~ie-~-dg~~~~LsHyP~~~~~~~~-----~~----~r~~y~~~~~~llIHGH~H~~~ 149 (186)
T COG4186 99 -----------QAFQ----RIE-W-DGEDVYLSHYPRPGQDHPG-----ME----SRFDYLRLRVPLLIHGHLHSQF 149 (186)
T ss_pred -----------HHHH----hee-E-CCeEEEEEeCCCCCCCCcc-----hh----hhHHHHhccCCeEEeccccccc
Confidence 0011 111 1 3468999999986654331 11 1122234479999999999965
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.9e-05 Score=62.31 Aligned_cols=64 Identities=9% Similarity=0.049 Sum_probs=39.1
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHH-hhCCccEEEEcCCCC-CC--ChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVA-KSYDARFVINTSELG-ED--DPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~-~~~~pdfvv~~GD~~-~~--~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
+|+||.+. .-..+.+.++++. ++.++|++|++||.- .. +..|...+.--...++|.|.+-|||+
T Consensus 1 LV~G~~~G---~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNG---RLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCc---cHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcCCccCCCCEEEECCCCC
Confidence 36788432 2244455555543 345789999999963 22 12333333333456889999999997
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0015 Score=65.60 Aligned_cols=69 Identities=7% Similarity=0.056 Sum_probs=42.0
Q ss_pred HHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 165 NWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 165 ~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
+|+. +|++...+-+|++.|-.+...... ...+. ... .+++. +||++|.||.|... ...+++..+.+|.-
T Consensus 235 ~~v~-~Lr~~GaDvIIaLsH~G~~~d~~~----~~~en--a~~-~l~~v~gID~IlgGHsH~~~~~~ingv~vvqaG~~ 305 (780)
T PRK09418 235 KMVP-KMKAEGADVIVALAHSGVDKSGYN----VGMEN--ASY-YLTEVPGVDAVLMGHSHTEVKDVFNGVPVVMPGVF 305 (780)
T ss_pred HHHH-HHHhcCCCEEEEEeccCccccccc----ccchh--hhH-HHhcCCCCCEEEECCCCCcccccCCCEEEEEcChh
Confidence 4444 566556788999999887543211 00111 111 13444 89999999999965 45567776665543
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00014 Score=66.70 Aligned_cols=102 Identities=9% Similarity=-0.038 Sum_probs=59.8
Q ss_pred CccEEEEEEeCCC-CCC----hhHHHH---------HHHHHHHHhhCCccEEEEcCCCCC-----CChhhhhhhc----c
Q 022941 47 GLDFYFISVTGGF-RPL----EQQTLL---------LKQMEDVAKSYDARFVINTSELGE-----DDPLKQNATW----L 103 (289)
Q Consensus 47 ~~~~~f~~~gD~~-~g~----~~~~~~---------~~~l~~~~~~~~pdfvv~~GD~~~-----~~~~~~~~~~----~ 103 (289)
+..++.+.++|.+ .|. ..-..+ .+.......-.+||.+++.||+-. ++++|++.++ +
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 6889999999932 221 000111 111222223479999999999732 3557766653 4
Q ss_pred C-CCCCCCeEEecCCCcCCCCce-----eEeE---eC-----CCCCeEEEEEEcCCCcc
Q 022941 104 F-PSLKVPWYTTKASKEKEVGCF-----QEQI---RL-----PHGEALDIIGVNTGSLQ 148 (289)
Q Consensus 104 ~-~~l~~P~~~v~GNHD~~~~~~-----~~~~---~~-----p~~~~~~~i~lDt~~~~ 148 (289)
| ....+|...+|||||.-.++- -.+| +- .+.++..|+++|+....
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~fg~~~r~f~v~~~tf~~~d~~~ls 184 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVFGPTERRFDVGNLTFVMFDSNALS 184 (410)
T ss_pred hCCCCCCeeEEeCCccccccccccchhHHHHHHHhhcchhhhhccCCceeEEeeehhhc
Confidence 4 335899999999999322220 0111 11 13466778888887654
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00087 Score=59.56 Aligned_cols=42 Identities=21% Similarity=0.235 Sum_probs=27.7
Q ss_pred HHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 170 ALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 170 ~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
+|++...+-+|++.|-.... + . .+.++. +||++++||.|...
T Consensus 177 ~lr~~~~D~II~l~H~G~~~--------d-~-------~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 177 KLKAQGVNKIIALSHSGYEV--------D-K-------EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHhcCCCEEEEEeccCchh--------H-H-------HHHHcCCCCcEEEeCCcCccc
Confidence 45544567889999986421 0 1 233333 79999999999943
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.1e-05 Score=64.71 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhCCccEEEEcCCCCCCC--hhhhhhh----ccCCCCCCCeEEecCCCc
Q 022941 67 LLLKQMEDVAKSYDARFVINTSELGEDD--PLKQNAT----WLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 67 ~~~~~l~~~~~~~~pdfvv~~GD~~~~~--~~~~~~~----~~~~~l~~P~~~v~GNHD 119 (289)
+..+.+.+..++.+||.|+++||+.... ..+.... ......++|++.++||||
T Consensus 28 ~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD 86 (172)
T cd07391 28 DTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHD 86 (172)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCc
Confidence 4556666677778999999999985321 1111111 112345789999999999
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.9e-05 Score=66.61 Aligned_cols=70 Identities=7% Similarity=-0.038 Sum_probs=46.3
Q ss_pred EEEEEEeCCCCCChh-------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC---hhhhhhhccCCCCCCCeEE
Q 022941 50 FYFISVTGGFRPLEQ-------------QTLLLKQMEDVAKSYDARFVINTSELGEDD---PLKQNATWLFPSLKVPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~-------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~---~~~~~~~~~~~~l~~P~~~ 113 (289)
-+-++++|.|.|... ..+..+.+.+..++.+||.||++||+.... ..+++..+.++.+..|++.
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~~~v~~ 94 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTFRDLIL 94 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcCCcEEE
Confidence 346789997766422 123444555556677899999999985321 2344333445556679999
Q ss_pred ecCCCc
Q 022941 114 TKASKE 119 (289)
Q Consensus 114 v~GNHD 119 (289)
++||||
T Consensus 95 V~GNHD 100 (225)
T TIGR00024 95 IRGNHD 100 (225)
T ss_pred ECCCCC
Confidence 999999
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=3.8e-05 Score=67.83 Aligned_cols=67 Identities=10% Similarity=-0.044 Sum_probs=43.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
+.+++||.|.. -..+.+.+.++.-..++|.++++||+...++.-.+..+.+.+++.++++|+||||.
T Consensus 2 ~~~vIGDIHG~---~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~~~~~~VlGNHD~ 68 (275)
T PRK00166 2 ATYAIGDIQGC---YDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLGDSAVTVLGNHDL 68 (275)
T ss_pred cEEEEEccCCC---HHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcCCCeEEEecChhH
Confidence 46899997642 23333344433212468999999998765553334444444556678999999993
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.003 Score=62.36 Aligned_cols=55 Identities=11% Similarity=0.150 Sum_probs=33.2
Q ss_pred HHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 165 NWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 165 ~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
+|.. +|++...+-+|++.|-......... ..+.....+++. +||++++||.|...
T Consensus 186 ~~v~-~Lr~~gaDvII~LsH~G~~~d~~~~-------~~en~~~~l~~v~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 186 KYVP-EMKAKGADIIVALAHSGISADPYQP-------GAENSAYYLTKVPGIDAVLFGHSHAVF 241 (626)
T ss_pred HHHH-HHHHcCCCEEEEEeccCcCCCcccc-------ccchHHHHHhcCCCCCEEEcCCCCccC
Confidence 4443 5666557889999998875432110 000111124444 89999999999954
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00084 Score=65.26 Aligned_cols=143 Identities=14% Similarity=0.119 Sum_probs=71.1
Q ss_pred HHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhhccCCCCCCCeEEecCCCcCCCCc--e------------eEe
Q 022941 68 LLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNATWLFPSLKVPWYTTKASKEKEVGC--F------------QEQ 128 (289)
Q Consensus 68 ~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~~~~~~l~~P~~~v~GNHD~~~~~--~------------~~~ 128 (289)
++..+++.-++.+..+++..||.....+.. +...+.+..++.- ..++||||+..|. + .+.
T Consensus 37 l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g~D-a~~lGNHEFd~G~~~l~~~~~~~~fp~l~aN 115 (550)
T TIGR01530 37 LNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAGFD-FFTLGNHEFDAGNEGLKEFLEPLEIPVLSAN 115 (550)
T ss_pred HHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccCCC-EEEeccccccCCHHHHHHHHHhCCCCEEEEe
Confidence 344444443344456899999974332211 1112334444332 6899999964442 0 011
Q ss_pred E-----------eCC------CCCeEEEEEEcCCCccC--CCCCCCCC-CcHHHHHHHHHHHHhhcCCCeEEEEeecccc
Q 022941 129 I-----------RLP------HGEALDIIGVNTGSLQG--KIPTALPS-ASGDLLLNWLKSALEATNGQWCIVVGFHPLV 188 (289)
Q Consensus 129 ~-----------~~p------~~~~~~~i~lDt~~~~~--~~~~~~~~-~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~ 188 (289)
+ ..| ++-.+-||++.+..... ..+..... ...-+-.+-.-++|++...+-+|++.|-...
T Consensus 116 v~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 116 VIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFE 195 (550)
T ss_pred eecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcH
Confidence 1 011 23446678886532111 11110000 1111222223345665556788999997531
Q ss_pred ccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 189 ICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
. + . .+.++. +||++|+||.|...
T Consensus 196 ~--------d-~-------~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K--------N-C-------EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H--------H-H-------HHHhcCCCCCEEEeCCCCccc
Confidence 1 1 1 233433 79999999999953
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.01 Score=58.80 Aligned_cols=53 Identities=4% Similarity=0.127 Sum_probs=31.8
Q ss_pred HHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 168 KSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 168 ~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
-.+|++...+-+|++.|-.+...... ...+ +.... +.+. +||+++.||.|...
T Consensus 211 v~~Lk~~gaDvII~LsH~G~~~d~~~----~~ae--n~~~~-l~~v~gID~Il~GHsH~~~ 264 (649)
T PRK09420 211 VPEMKEKGADIVVAIPHSGISADPYK----AMAE--NSVYY-LSEVPGIDAIMFGHSHAVF 264 (649)
T ss_pred HHHHHHcCCCEEEEEecCCcCCCCcc----cccc--chhHH-HhcCCCCCEEEeCCCCccC
Confidence 34577656788999999887432211 0000 11112 3443 79999999999843
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.002 Score=61.44 Aligned_cols=56 Identities=16% Similarity=0.187 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeE-EEeCCCccc
Q 022941 162 LLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNT-YLSKHGCIK 226 (289)
Q Consensus 162 ~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~-vl~GH~H~~ 226 (289)
.|.+|-.+.++...-+-+|+++|-|.-.... ..-....+.+.+ +++. ||-||.|..
T Consensus 212 ~~~~~~~~m~~~~~idlii~lgH~~~~~~~e---------~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 212 TQSEWEQDMVNTTDIDLIIALGHSPVRDDDE---------WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred hccchHHHHhhccCccEEEEecccccccchh---------hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 4778887777765557788899988743322 111233344444 6777 999999984
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=9.2e-05 Score=63.98 Aligned_cols=67 Identities=9% Similarity=-0.005 Sum_probs=41.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhC-CccEEEEcCCCCCCChhhhhhhccC-C--CCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSY-DARFVINTSELGEDDPLKQNATWLF-P--SLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~-~pdfvv~~GD~~~~~~~~~~~~~~~-~--~l~~P~~~v~GNHD~ 120 (289)
+++++||.| |.. ..+.+.+.++.... +.|.++++||+...++...+..+.+ + .-..++++++||||.
T Consensus 2 ~~~~IsDIH-G~~--~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 2 AIYVVPDIH-GEY--QKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred eEEEEECCC-CCH--HHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhhcCCCeEEEECCcHH
Confidence 679999977 332 33444444443333 3599999999876554333333321 1 124578999999993
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=9.4e-05 Score=62.66 Aligned_cols=64 Identities=16% Similarity=0.074 Sum_probs=39.5
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
|++++||.|. . -.++.+.+..+....++|.++++||+...++.-.+..+.+.. .+++.++||||
T Consensus 2 ri~~isDiHg-~--~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~--~~~~~v~GNhe 65 (207)
T cd07424 2 RDFVVGDIHG-H--YSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE--PWFHAVRGNHE 65 (207)
T ss_pred CEEEEECCCC-C--HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc--CCEEEeECCCh
Confidence 5789999773 2 233333333322224689999999986544432333333332 35799999999
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00013 Score=63.34 Aligned_cols=29 Identities=3% Similarity=-0.111 Sum_probs=22.8
Q ss_pred CCeEEEeCCCccce-ecCCCeEEEecCCCC
Q 022941 214 GVNTYLSKHGCIKY-SRQDSITYMENPGLI 242 (289)
Q Consensus 214 ~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~ 242 (289)
..+++|+||.|.+. ...+++.++..|+-.
T Consensus 191 ~p~vii~Gh~h~~~~~~~~~~~~vn~Gsf~ 220 (243)
T cd07386 191 VPDILHTGHVHVYGVGVYRGVLLVNSGTWQ 220 (243)
T ss_pred CCCEEEECCCCchHhEEECCEEEEECCCCc
Confidence 46899999999965 556788888877753
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0069 Score=54.68 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 167 LKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 167 L~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
.-++|++...+-+|++.|---+.. + ..+.++. +||++|.||.|...
T Consensus 199 ~v~~Lr~~gvD~II~LsH~g~~~~-------d--------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 199 SIDALTAQGINKIILLSHLQQISI-------E--------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred HHHHHHHCCCCEEEEEecccccch-------H--------HHHHhcCCCCCEEEeCCCCccC
Confidence 344555555678899999731110 1 1244444 79999999999853
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00013 Score=63.77 Aligned_cols=65 Identities=11% Similarity=-0.031 Sum_probs=41.9
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
.+|||.|.. -.++.+.+.++.-..+.|.++++||+...++.-.+..+.+.+++..+..|+||||.
T Consensus 2 yvIGDIHG~---~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGC---YDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLGDSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCC---HHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcCCCeEEEcCCchH
Confidence 579997642 23333344443323467999999999776654344445445555678999999993
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.017 Score=58.37 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=31.7
Q ss_pred HHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 168 KSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 168 ~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
-.+|++...+-+|++.|--+....... + .+ +.-..+.+--+||+++.||.|...
T Consensus 302 v~~Lr~~GaDvIIaLsH~G~~~d~~~~--~--~E--n~~~~LA~v~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 302 IPTMRAAGADIVLVLSHSGIGDDQYEV--G--EE--NVGYQIASLSGVDAVVTGHSHAEF 355 (814)
T ss_pred HHHHHhcCCCEEEEEeCCCcccccccc--c--cc--chhhHHhcCCCCCEEEECCCCCcc
Confidence 335665557889999998764332110 0 01 111223222389999999999954
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00026 Score=60.51 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=41.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
+++++||.|. .-.++.+.++++....+.|-++++||+...++.-.+..+.+.+. .+++++||||.
T Consensus 18 ri~vigDIHG---~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~--~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHG---CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH--WVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccC---CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC--CceEeeCchHH
Confidence 7899999764 22334444444422336799999999876655333334433332 35799999993
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0094 Score=56.27 Aligned_cols=44 Identities=9% Similarity=0.191 Sum_probs=31.8
Q ss_pred CccEEEEEEeCCCCCChh--------HHHHHHHHHHHHhhCCccEEEEcCCC
Q 022941 47 GLDFYFISVTGGFRPLEQ--------QTLLLKQMEDVAKSYDARFVINTSEL 90 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~--------~~~~~~~l~~~~~~~~pdfvv~~GD~ 90 (289)
+..+|+++.+|.|.|.-. .-...+.+..++...+.|+|+..||+
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDL 62 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDL 62 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcc
Confidence 688999999997665411 11223344556778899999999996
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0037 Score=49.20 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=55.0
Q ss_pred HHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC---cccCCcEEEEEEeCcEEEEEEEc-CCCcEEEEEEEe
Q 022941 208 HIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG---REMVDGFLLHKVSSLEILTYFVT-LEGEVVYRTATR 282 (289)
Q Consensus 208 ~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g---~~~~~gf~~v~v~~~~i~~~~~~-~~g~~~~~~~i~ 282 (289)
-+-++..||..+.||+|... .+.+|--|+..|+..+..+- ....++|.++++.++.+....|. .+|++--..-.+
T Consensus 101 ~LaRqldvDILl~G~Th~f~Aye~eg~ffvnPGSaTGAfn~~~t~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~y 180 (183)
T KOG3325|consen 101 LLARQLDVDILLTGHTHKFEAYEHEGKFFVNPGSATGAFNVSDTDIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEY 180 (183)
T ss_pred HHHHhcCCcEEEeCCceeEEEEEeCCcEEeCCCcccCCCcccccCCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEe
Confidence 34456699999999999955 56677777777765444221 23689999999999998888877 688884444344
Q ss_pred cC
Q 022941 283 ER 284 (289)
Q Consensus 283 ~~ 284 (289)
|+
T Consensus 181 kK 182 (183)
T KOG3325|consen 181 KK 182 (183)
T ss_pred cC
Confidence 43
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0004 Score=59.39 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=39.7
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
|++++||.|. +-.++.+.++++.-..+.|.++++||+...++.-.+..+.+.. -.++.+.||||
T Consensus 16 ri~visDiHg---~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~--~~~~~v~GNHE 79 (218)
T PRK09968 16 HIWVVGDIHG---EYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ--PWFISVKGNHE 79 (218)
T ss_pred eEEEEEeccC---CHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh--CCcEEEECchH
Confidence 8999999764 2233333333332134689999999987655432333333322 24689999999
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00052 Score=60.43 Aligned_cols=66 Identities=12% Similarity=-0.069 Sum_probs=41.4
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
+..+|||.|. .-.++.+.+.++.-..+.|-++++||+...++.-.+..+.+.+++..+..|.||||
T Consensus 2 ~~YvIGDIHG---c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~~~~~~VlGNHD 67 (279)
T TIGR00668 2 ATYLIGDLHG---CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLGDAVRLVLGNHD 67 (279)
T ss_pred cEEEEEcccC---CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcCCCeEEEEChhH
Confidence 3578999664 22334444444432345789999999977665433444444445445679999999
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00044 Score=59.73 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=40.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHH---hh------CCccEEEEcCCCCCCChhhhhhhccCCCC--CCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVA---KS------YDARFVINTSELGEDDPLKQNATWLFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~---~~------~~pdfvv~~GD~~~~~~~~~~~~~~~~~l--~~P~~~v~GNHD 119 (289)
+++++||.|.- -.++.+.+.++. ++ .+.|.++++||+...++.-.+..+.+..+ +..++++.||||
T Consensus 2 ~i~vigDIHG~---~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~~~~~~v~GNHE 78 (234)
T cd07423 2 PFDIIGDVHGC---YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAAGAALCVPGNHD 78 (234)
T ss_pred CeEEEEECCCC---HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhCCcEEEEECCcH
Confidence 68899997652 233333444331 11 13689999999876555433444433222 235789999999
Q ss_pred C
Q 022941 120 K 120 (289)
Q Consensus 120 ~ 120 (289)
.
T Consensus 79 ~ 79 (234)
T cd07423 79 N 79 (234)
T ss_pred H
Confidence 3
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0015 Score=57.94 Aligned_cols=66 Identities=14% Similarity=0.100 Sum_probs=37.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhh-----CCccEEEEcCCCCCCChhhhhhhccCCCC-----CCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKS-----YDARFVINTSELGEDDPLKQNATWLFPSL-----KVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~-----~~pdfvv~~GD~~~~~~~~~~~~~~~~~l-----~~P~~~v~GNHD 119 (289)
+++++||.|.-.. .+.+.+..+... ...+.+|++||+...++.-.+..+.+..+ ...+++++||||
T Consensus 3 ~iyaIGDIHG~~d---~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE 78 (304)
T cd07421 3 VVICVGDIHGYIS---KLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHD 78 (304)
T ss_pred eEEEEEeccCCHH---HHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCCh
Confidence 6889999764222 222333333222 23578999999876555333333322111 125789999999
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00079 Score=57.43 Aligned_cols=64 Identities=13% Similarity=0.021 Sum_probs=38.2
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCC---CCCeEEecCCCcC
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSL---KVPWYTTKASKEK 120 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l---~~P~~~v~GNHD~ 120 (289)
+++||.|. . -..+.+.+..+ ...++|.+|++||+...++...+..+.+..+ +.+++.+.||||.
T Consensus 1 ~~igDiHg-~--~~~l~~~l~~~-~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~~~~~~~l~GNHe~ 67 (225)
T cd00144 1 YVIGDIHG-C--LDDLLRLLEKI-GFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKILPDNVILLRGNHED 67 (225)
T ss_pred CEEeCCCC-C--HHHHHHHHHHh-CCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCCCCcEEEEccCchh
Confidence 37899773 2 22333334333 2357899999999865444333333222222 4588999999993
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0011 Score=56.91 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=38.1
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHhh-------CCccEEEEcCCCCCCChhhhhhhccCCCC--CCCeEEecCCCcC
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAKS-------YDARFVINTSELGEDDPLKQNATWLFPSL--KVPWYTTKASKEK 120 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~~-------~~pdfvv~~GD~~~~~~~~~~~~~~~~~l--~~P~~~v~GNHD~ 120 (289)
+.+|||.|- .-..+.+.+.++... ...|.+|++||+...++.-.+..+.+.++ +-.++++.||||.
T Consensus 1 ~~vIGDIHG---~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~~~~~~l~GNHE~ 75 (222)
T cd07413 1 YDFIGDIHG---HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDAGHALAVMGNHEF 75 (222)
T ss_pred CEEEEeccC---CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcCCCEEEEEccCcH
Confidence 468999664 223333344433211 14589999999876555333333333222 2358899999993
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0012 Score=57.47 Aligned_cols=66 Identities=11% Similarity=-0.014 Sum_probs=37.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhh--------CCccEEEEcCCCCCCChhhhhhhccCCC--CCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKS--------YDARFVINTSELGEDDPLKQNATWLFPS--LKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~--------~~pdfvv~~GD~~~~~~~~~~~~~~~~~--l~~P~~~v~GNHD 119 (289)
++.++||.|- . -..+.+.+.++.-. ..-|-++++||+...++.=.+..+.+.. ...+++++.||||
T Consensus 2 ~~~vIGDIHG-~--~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~~~~~~~l~GNHE 77 (245)
T PRK13625 2 KYDIIGDIHG-C--YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVEKKAAYYVPGNHC 77 (245)
T ss_pred ceEEEEECcc-C--HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhhCCCEEEEeCccH
Confidence 5789999763 2 22333334332111 1347899999987655432233332111 1347899999999
|
|
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0025 Score=54.49 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=44.9
Q ss_pred ccEEEEEEeCCCCCCh-------------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCC--hhhhhhhc---cCCCCCC
Q 022941 48 LDFYFISVTGGFRPLE-------------QQTLLLKQMEDVAKSYDARFVINTSELGEDD--PLKQNATW---LFPSLKV 109 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~-------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~--~~~~~~~~---~~~~l~~ 109 (289)
..-+-++++|.|.|.. ...++.+.+.++....+|+-+|+.||+-.+- ..+++..+ ..+.+.-
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3446789999665532 2234555667778889999999999974321 12333321 1122211
Q ss_pred -CeEEecCCCc
Q 022941 110 -PWYTTKASKE 119 (289)
Q Consensus 110 -P~~~v~GNHD 119 (289)
-+..++||||
T Consensus 98 ~evi~i~GNHD 108 (235)
T COG1407 98 REVIIIRGNHD 108 (235)
T ss_pred CcEEEEeccCC
Confidence 4899999999
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.3 Score=41.99 Aligned_cols=171 Identities=11% Similarity=0.100 Sum_probs=88.9
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCCcCCCCce--
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASKEKEVGCF-- 125 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~-- 125 (289)
.|++++||. .|...-..+.+.+..+.++.++||||..|-++..+. .++ .++.+.+.++- +.+.|||=+.....
T Consensus 1 mriLfiGDv-vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k-~y~~l~~~G~d-viT~GNH~wd~~ei~~ 77 (266)
T COG1692 1 MRILFIGDV-VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEK-IYKELLEAGAD-VITLGNHTWDQKEILD 77 (266)
T ss_pred CeEEEEecc-cCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHH-HHHHHHHhCCC-EEecccccccchHHHH
Confidence 478999992 233344566667777777889999999999865432 222 22222222333 57899999322211
Q ss_pred ----eEeE----eCCC---CCeEEEEEEcCCC----------ccCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CeEEEE
Q 022941 126 ----QEQI----RLPH---GEALDIIGVNTGS----------LQGKIPTALPSASGDLLLNWLKSALEATNG--QWCIVV 182 (289)
Q Consensus 126 ----~~~~----~~p~---~~~~~~i~lDt~~----------~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~--~~~iV~ 182 (289)
..++ +.|+ +.+..++-.+..- +.....+.| ..-+++.+...+. +.+||=
T Consensus 78 ~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~P--------F~~~d~l~~~~~~~~~~iiVD 149 (266)
T COG1692 78 FIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNP--------FKAADKLLDEIKLGTDLIIVD 149 (266)
T ss_pred HhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCH--------HHHHHHHHHhCccCCceEEEE
Confidence 1111 2332 2333333332211 111111111 2224445554443 366666
Q ss_pred eeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce----ecCCCeEEEecCCCCCC
Q 022941 183 GFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY----SRQDSITYMENPGLIES 244 (289)
Q Consensus 183 ~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~----~~~~gi~~i~~g~~~~~ 244 (289)
+|--.-+ ... + +-..-+-.|.+++-=|+|.+. .-.+|+-|++--+.+++
T Consensus 150 FHAEtTS-EK~-------a-----~g~yldGrvsavvGTHTHV~TaD~rIL~~GTayiTDvGMtG~ 202 (266)
T COG1692 150 FHAETTS-EKN-------A-----FGWYLDGRVSAVVGTHTHVPTADERILPKGTAYITDVGMTGP 202 (266)
T ss_pred ccccchh-hhh-------h-----hheEEcCeEEEEEeccCccccccceecCCCcEEEecCccccc
Confidence 7643211 100 0 011223368999999999965 23578999987665544
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.14 Score=44.27 Aligned_cols=56 Identities=9% Similarity=0.010 Sum_probs=32.9
Q ss_pred HHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 164 LNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 164 l~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
.++++ +|++. .+.+||..|-..-.... . ......+...+.+.++|+++.||.|...
T Consensus 165 ~~~i~-~lr~~-~D~vIv~~H~G~e~~~~-----p-~~~~~~la~~l~~~G~D~IiG~H~Hv~q 220 (239)
T cd07381 165 AADIA-EAKKK-ADIVIVSLHWGVEYSYY-----P-TPEQRELARALIDAGADLVIGHHPHVLQ 220 (239)
T ss_pred HHHHH-HHhhc-CCEEEEEecCcccCCCC-----C-CHHHHHHHHHHHHCCCCEEEcCCCCcCC
Confidence 34443 34433 67899999964422111 1 1112334445556799999999999843
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.092 Score=44.79 Aligned_cols=27 Identities=19% Similarity=0.059 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHhC--CeEEEeCCCccce
Q 022941 201 KIYEPLHHIFMKFG--VNTYLSKHGCIKY 227 (289)
Q Consensus 201 ~~~~~l~~ll~~~~--V~~vl~GH~H~~~ 227 (289)
.-+++++.++.+.+ -.++|||..|...
T Consensus 177 ~er~~l~~~~~~~~~~~vv~lSGDvH~~~ 205 (228)
T cd07389 177 AERERLLDLLAKRKIKNVVFLSGDVHLAE 205 (228)
T ss_pred HHHHHHHHHHHHhCCCCeEEEecHHHHHH
Confidence 34667777766553 3478999999843
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.87 Score=39.26 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=33.4
Q ss_pred HHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 164 LNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 164 l~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
.+|++ +|++ +.+.+||+.|--.-..... ... ...+..-+.+.++|+++.||.|...
T Consensus 163 ~~~i~-~lr~-~~D~vIv~~H~G~e~~~~p-----~~~-~~~~A~~l~~~G~DvIiG~H~H~~~ 218 (239)
T smart00854 163 LADIA-RARK-KADVVIVSLHWGVEYQYEP-----TDE-QRELAHALIDAGADVVIGHHPHVLQ 218 (239)
T ss_pred HHHHH-HHhc-cCCEEEEEecCccccCCCC-----CHH-HHHHHHHHHHcCCCEEEcCCCCcCC
Confidence 34443 4554 4678999999765322111 111 1234444545799999999999843
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.032 Score=37.58 Aligned_cols=48 Identities=13% Similarity=0.061 Sum_probs=26.7
Q ss_pred CeEEEecCCCCCC----------CCC-cccCCcEEEEEEe-CcEEEEEEEcC-CCcEEEEE
Q 022941 232 SITYMENPGLIES----------GNG-REMVDGFLLHKVS-SLEILTYFVTL-EGEVVYRT 279 (289)
Q Consensus 232 gi~~i~~g~~~~~----------~~g-~~~~~gf~~v~v~-~~~i~~~~~~~-~g~~~~~~ 279 (289)
++.||+.|+++.. |.. +...+||.++++. ...+.++++.. +|+++|+|
T Consensus 2 apVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 2 APVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp S-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 4567777765443 111 5679999999965 67899999985 59999986
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.6 Score=40.48 Aligned_cols=170 Identities=12% Similarity=0.091 Sum_probs=72.3
Q ss_pred EEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCcCCCCcee-----
Q 022941 53 ISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKEKEVGCFQ----- 126 (289)
Q Consensus 53 ~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~----- 126 (289)
+++||. .|...-..+.+.|.++.++.++||||..|.+...+. .-...++.+-++++- ..+.|||=+...+..
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~~GvD-viT~GNH~wdkkei~~~i~~ 78 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFKAGVD-VITMGNHIWDKKEIFDFIDK 78 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHHHT-S-EEE--TTTTSSTTHHHHHHH
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHhcCCC-EEecCcccccCcHHHHHHhc
Confidence 367882 233344566677777777889999999999865432 111122222122333 478999994333321
Q ss_pred -EeE----eCCC---CCeEEE----------EEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecccc
Q 022941 127 -EQI----RLPH---GEALDI----------IGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLV 188 (289)
Q Consensus 127 -~~~----~~p~---~~~~~~----------i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~ 188 (289)
.++ ++|. +.++.+ +.|=...+. .+. .-.-.-++++-+.|+ .+.+.+||=+|--.
T Consensus 79 ~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm-----~~~-~~PF~~~d~~l~~l~-~~~~~iiVDFHAEa- 150 (253)
T PF13277_consen 79 EPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFM-----PPI-DCPFRAADRLLEELK-EETDIIIVDFHAEA- 150 (253)
T ss_dssp -SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---------S-HHHHHHHHHHH------SEEEEEEE-S--
T ss_pred CCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccC-----CCC-CChHHHHHHHHHhcc-ccCCEEEEEeecCc-
Confidence 111 2332 122222 222111111 111 122233344444442 34456666677321
Q ss_pred ccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce---e-cCCCeEEEecCCCCCC
Q 022941 189 ICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY---S-RQDSITYMENPGLIES 244 (289)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~---~-~~~gi~~i~~g~~~~~ 244 (289)
+ .+ +.-+...-+-+|.+|+-=|+|.+. + -.+|+-|++--+.+++
T Consensus 151 T---------SE---K~A~g~~lDGrvsaV~GTHTHVqTaDerILp~GTaYiTDvGMtG~ 198 (253)
T PF13277_consen 151 T---------SE---KQAMGWYLDGRVSAVVGTHTHVQTADERILPGGTAYITDVGMTGP 198 (253)
T ss_dssp H---------HH---HHHHHHHHBTTBSEEEEESSSS-BS--EE-TTS-EEES---EBEE
T ss_pred H---------HH---HHHHHHHhCCcEEEEEeCCCCccCchhhccCCCCEEEecCccccC
Confidence 1 11 112223344589999999999976 2 2468999987554443
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.085 Score=49.52 Aligned_cols=76 Identities=7% Similarity=0.134 Sum_probs=45.9
Q ss_pred CCCCccEEEEEEeCCCCCChhH-HHHHHHHHHHHhh-----CCccEEEEcCCCC--------CCC--------hhhhhhh
Q 022941 44 NRKGLDFYFISVTGGFRPLEQQ-TLLLKQMEDVAKS-----YDARFVINTSELG--------EDD--------PLKQNAT 101 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~~~-~~~~~~l~~~~~~-----~~pdfvv~~GD~~--------~~~--------~~~~~~~ 101 (289)
+..+..++.++++|.|.|+..- ......+.++.+. .+...++++||.. +.+ .+|++..
T Consensus 220 ~~~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A 299 (481)
T COG1311 220 NTGDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELA 299 (481)
T ss_pred CCCCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHH
Confidence 4567889999999998887432 2223333344432 2357899999952 111 1233332
Q ss_pred ccCCCC--CCCeEEecCCCc
Q 022941 102 WLFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 102 ~~~~~l--~~P~~~v~GNHD 119 (289)
+.+... .+.++..|||||
T Consensus 300 ~~L~~vp~~I~v~i~PGnhD 319 (481)
T COG1311 300 EFLDQVPEHIKVFIMPGNHD 319 (481)
T ss_pred HHHhhCCCCceEEEecCCCC
Confidence 333332 567899999999
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.037 Score=50.00 Aligned_cols=24 Identities=17% Similarity=0.401 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
.+.+...|++++.++++=||.-..
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v~ 276 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECKP 276 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhhh
Confidence 467788999999999999999653
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.058 Score=49.71 Aligned_cols=66 Identities=18% Similarity=0.137 Sum_probs=36.7
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCc-cEEEEcCCCCCCChhhhhhhccC---C-CCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDA-RFVINTSELGEDDPLKQNATWLF---P-SLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~p-dfvv~~GD~~~~~~~~~~~~~~~---~-~l~~P~~~v~GNHD~ 120 (289)
++.++||.|. .-.++.+.+... .-... +.+|++||....++.-.+....+ + ..+--++.+.||||.
T Consensus 67 ~i~VvGDIHG---~~~dL~~ll~~~-g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~ 137 (377)
T cd07418 67 EVVVVGDVHG---QLHDVLFLLEDA-GFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHES 137 (377)
T ss_pred CEEEEEecCC---CHHHHHHHHHHh-CCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeeccc
Confidence 5899999664 223333333322 11222 45899999866554333332211 1 123357999999993
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.088 Score=47.34 Aligned_cols=66 Identities=12% Similarity=-0.011 Sum_probs=37.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCC----CCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSL----KVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l----~~P~~~v~GNHD~ 120 (289)
+++++||.|.. -.++.+.+. .......+-++++||....++...+....+-.+ +--++.+.||||.
T Consensus 44 ~i~ViGDIHG~---~~dL~~l~~-~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~ 113 (305)
T cd07416 44 PVTVCGDIHGQ---FYDLLKLFE-VGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHEC 113 (305)
T ss_pred CEEEEEeCCCC---HHHHHHHHH-hcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcH
Confidence 47889996641 233333333 222234578999999866554333333221122 2357999999993
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.11 Score=45.82 Aligned_cols=66 Identities=8% Similarity=-0.047 Sum_probs=37.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhcc---CC-CCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWL---FP-SLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~---~~-~l~~P~~~v~GNHD~ 120 (289)
+++++||.|.. -.++.+.+... .....+-+++.||....++.-.+.... ++ ..+-.++.+.||||.
T Consensus 29 ~i~vvGDiHG~---~~~l~~ll~~~-~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~ 98 (271)
T smart00156 29 PVTVCGDIHGQ---FDDLLRLFDLN-GPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHES 98 (271)
T ss_pred CEEEEEeCcCC---HHHHHHHHHHc-CCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccH
Confidence 47889996641 23333333322 234567899999986655433333221 11 113357999999993
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.094 Score=47.37 Aligned_cols=24 Identities=4% Similarity=0.052 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
.+.+.+.|++.+.++++-||.-..
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~~ 256 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVKD 256 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCcccc
Confidence 457788999999999999999764
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=92.77 E-value=1.1 Score=40.72 Aligned_cols=24 Identities=17% Similarity=0.354 Sum_probs=20.4
Q ss_pred HHHHHHHHHhCCeEEEeCCCccce
Q 022941 204 EPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 204 ~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
..+..||++-+-..+||.|.|.-.
T Consensus 208 p~~~eLL~~LkP~yWfsAHLH~KF 231 (456)
T KOG2863|consen 208 PALEELLEDLKPQYWFSAHLHVKF 231 (456)
T ss_pred hHHHHHHHHhCcchhhhhhHhhHH
Confidence 467888999999999999999843
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.2 Score=45.33 Aligned_cols=66 Identities=9% Similarity=-0.003 Sum_probs=36.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhcc---CC-CCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWL---FP-SLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~---~~-~l~~P~~~v~GNHD~ 120 (289)
.++++||.|. .-.++.+.+.. ......+-.|++||....++...+.... ++ ..+-.++.+.||||.
T Consensus 60 ~i~vvGDIHG---~~~dL~~l~~~-~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~ 129 (320)
T PTZ00480 60 PLKICGDVHG---QYFDLLRLFEY-GGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 129 (320)
T ss_pred CeEEEeeccc---CHHHHHHHHHh-cCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccch
Confidence 4888999664 12333333322 2223446788999986655433333221 11 113357999999993
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.21 Score=44.46 Aligned_cols=64 Identities=6% Similarity=-0.107 Sum_probs=36.3
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhcc---CC-CCCCCeEEecCCCc
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWL---FP-SLKVPWYTTKASKE 119 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~---~~-~l~~P~~~v~GNHD 119 (289)
++++||.|.. -.++.+.+.. ......+-.|++||....++.-.+.... ++ ..+-.++.+.||||
T Consensus 44 i~vvGDIHG~---~~dL~~ll~~-~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE 111 (285)
T cd07415 44 VTVCGDIHGQ---FYDLLELFRV-GGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHE 111 (285)
T ss_pred EEEEEeCCCC---HHHHHHHHHH-cCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccc
Confidence 7889996631 2233333322 2223456789999986555433333221 11 12346899999999
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.95 E-value=0.23 Score=44.45 Aligned_cols=24 Identities=8% Similarity=0.191 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
.+.+.+.|++.+.++++=||.-..
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~~ 245 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVVE 245 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCcccc
Confidence 467788899999999999999653
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.21 Score=45.08 Aligned_cols=22 Identities=14% Similarity=0.401 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCeEEEeCCCc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGC 224 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H 224 (289)
.+++...++++++++++=||.-
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechh
Confidence 4678889999999999999994
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=89.54 E-value=1.6 Score=37.94 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhcC--CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccc
Q 022941 163 LLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 163 Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
+.+.+.+++++.+ .+.+||+.|--.-... .... ...++...|.+.++|+|+.+|-|.-
T Consensus 169 ~~~~i~~~i~~~r~~~D~vIv~~HwG~e~~~-----~p~~-~q~~~a~~lidaGaDiIiG~HpHv~ 228 (250)
T PF09587_consen 169 GIERIKEDIREARKKADVVIVSLHWGIEYEN-----YPTP-EQRELARALIDAGADIIIGHHPHVI 228 (250)
T ss_pred hHHHHHHHHHHHhcCCCEEEEEeccCCCCCC-----CCCH-HHHHHHHHHHHcCCCEEEeCCCCcc
Confidence 3455666655543 5689999997421111 1112 2334555566689999999999983
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=89.40 E-value=0.44 Score=42.77 Aligned_cols=24 Identities=4% Similarity=-0.085 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
.+.+.+.|++.+.++++=||.-..
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~~ 238 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLVM 238 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhhc
Confidence 467888899999999999999664
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=0.28 Score=43.83 Aligned_cols=24 Identities=4% Similarity=0.159 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCeEEEeCCCccc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
.+.+.+.+++.+.++++=||.-.+
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~~ 247 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVME 247 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCcccc
Confidence 467888899999999999999663
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=88.07 E-value=0.56 Score=41.27 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhc--CCCeEEEEeeccccccccc--c---c----hh------hHHhhHHHHHHHHHHhCCeEEEeCCCcc
Q 022941 163 LLNWLKSALEAT--NGQWCIVVGFHPLVICEEH--E---E----QL------EAKKIYEPLHHIFMKFGVNTYLSKHGCI 225 (289)
Q Consensus 163 Ql~WL~~~L~~~--~~~~~iV~~HhP~~~~~~~--~---~----~~------~~~~~~~~l~~ll~~~~V~~vl~GH~H~ 225 (289)
-+-||+.+|..+ ..+++++|.|.---..... + . .+ .....+..++..++-|+|.-.+.||.|.
T Consensus 254 slpwlk~dl~~~aadgrpv~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd 333 (392)
T COG5555 254 SLPWLKVDLIYSAADGRPVYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHD 333 (392)
T ss_pred cCcceeccceeeccCCCceeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccc
Confidence 468999999865 3469999999843222111 0 0 00 0112356788889999999999999998
Q ss_pred c-e-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEE---cCCCcEEEEEEEecC
Q 022941 226 K-Y-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFV---TLEGEVVYRTATRER 284 (289)
Q Consensus 226 ~-~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~---~~~g~~~~~~~i~~~ 284 (289)
. . ....++.....- .....||.+..|.++.+.+..- ...|+|..+.++.|+
T Consensus 334 ~~mayrr~~ld~fkpk--------aa~~Ggfav~rvt~~~mDva~geae~~~G~v~Ft~afsk~ 389 (392)
T COG5555 334 FNMAYRRYDLDAFKPK--------AAVRGGFAVGRVTNPWMDVANGEAEHPRGSVCFTTAFSKK 389 (392)
T ss_pred cceeeeecCccccCcc--------chhhcceeEEEecCchhhhhcccccCCCccEEEehhhhhc
Confidence 3 2 222233222111 2245788888888776555433 356888877666554
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=84.61 E-value=1.5 Score=36.88 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=32.8
Q ss_pred EEEEeCCCCCC-hhH-HHHHHHHHHHHhhCCccEEEEcCCCCCC-Ch-----------hhhhh-h----ccCCCC--CCC
Q 022941 52 FISVTGGFRPL-EQQ-TLLLKQMEDVAKSYDARFVINTSELGED-DP-----------LKQNA-T----WLFPSL--KVP 110 (289)
Q Consensus 52 f~~~gD~~~g~-~~~-~~~~~~l~~~~~~~~pdfvv~~GD~~~~-~~-----------~~~~~-~----~~~~~l--~~P 110 (289)
+++++|-+.+. ... ..+.+.+..+..+.+|+.+|++|+.... .. .+.+. . +.++++ .++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 46788855442 112 2222222222225679999999996321 11 11111 1 123444 689
Q ss_pred eEEecCCCc
Q 022941 111 WYTTKASKE 119 (289)
Q Consensus 111 ~~~v~GNHD 119 (289)
+..+||+||
T Consensus 81 vvlvPg~~D 89 (209)
T PF04042_consen 81 VVLVPGPND 89 (209)
T ss_dssp EEEE--TTC
T ss_pred EEEeCCCcc
Confidence 999999999
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.73 E-value=3.8 Score=35.96 Aligned_cols=68 Identities=10% Similarity=0.007 Sum_probs=41.5
Q ss_pred CCCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC-CChhhhhhh-ccCCCCCCCe-EEecCCCcC
Q 022941 44 NRKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE-DDPLKQNAT-WLFPSLKVPW-YTTKASKEK 120 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~-~~~~~~~~~-~~~~~l~~P~-~~v~GNHD~ 120 (289)
....+..||+.++|.|.-..+. ..-..-|+.+++||.+. ...+|-..+ +.+.+|.--+ +++.||||.
T Consensus 56 p~~~~~~r~VcisdtH~~~~~i----------~~~p~gDvlihagdfT~~g~~~ev~~fn~~~gslph~yKIVIaGNHEL 125 (305)
T KOG3947|consen 56 PVGPGYARFVCISDTHELTFDI----------NDIPDGDVLIHAGDFTNLGLPEEVIKFNEWLGSLPHEYKIVIAGNHEL 125 (305)
T ss_pred CCCCCceEEEEecCcccccCcc----------ccCCCCceEEeccCCccccCHHHHHhhhHHhccCcceeeEEEeeccce
Confidence 4467889999999977522221 11246689999999764 333332223 3333442221 699999994
Q ss_pred C
Q 022941 121 E 121 (289)
Q Consensus 121 ~ 121 (289)
+
T Consensus 126 t 126 (305)
T KOG3947|consen 126 T 126 (305)
T ss_pred e
Confidence 3
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=83.24 E-value=2.5 Score=37.04 Aligned_cols=29 Identities=7% Similarity=0.026 Sum_probs=19.9
Q ss_pred CeEEEeCCCccce-ec-----CCCeEEEecCCCCC
Q 022941 215 VNTYLSKHGCIKY-SR-----QDSITYMENPGLIE 243 (289)
Q Consensus 215 V~~vl~GH~H~~~-~~-----~~gi~~i~~g~~~~ 243 (289)
-+++++||.|.+. +. ...+..|..|..++
T Consensus 204 PhVyf~Gnq~~f~t~~~~~~~~~~v~lv~vP~Fs~ 238 (257)
T cd07387 204 PHVYFAGNQPKFGTKLVEGEEGQRVLLVCVPSFSK 238 (257)
T ss_pred CCEEEeCCCcceeeeEEEcCCCCeEEEEEeCCcCc
Confidence 6899999999865 21 23466777777644
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >KOG2476 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.10 E-value=5.7 Score=37.40 Aligned_cols=66 Identities=11% Similarity=0.030 Sum_probs=42.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCC-ccEEEEcCCCCCC---ChhhhhhhccCCCCCCCeEEecCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYD-ARFVINTSELGED---DPLKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~-pdfvv~~GD~~~~---~~~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
.+++++||. .|.. ..+.+.+.++.++.+ .|+++++|+.-.+ +.+|.....-...+++|.|..-+|-
T Consensus 6 ~kILv~Gd~-~Gr~--~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDV-EGRF--DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCc-cccH--HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccCceeEEEecCCC
Confidence 689999993 2222 233455556666655 7999999997432 2244433344567789998877766
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 289 | |||
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-10 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-07 |
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 59.3 bits (143), Expect = 2e-10
Identities = 45/285 (15%), Positives = 81/285 (28%), Gaps = 68/285 (23%)
Query: 64 QQTLLLKQMEDVAKSYDARFVINT-------SELGEDDPLKQNATWLF-----PSL-KVP 110
++ K + K+ A F+++ D + PSL VP
Sbjct: 27 REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK--RFQETFEDVFSDPSLRNVP 84
Query: 111 WYTTKASKEKEVGCFQEQIRLPH---------------------GEALDIIGVNTGSLQG 149
W+ + + G QI ++ I ++T +L G
Sbjct: 85 WHVLAGNHDHL-GNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCG 143
Query: 150 K--------IPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKK 201
A L W+K L A + +V G +P+ EH K
Sbjct: 144 NSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPTHCLVK 203
Query: 202 IYEPLHHIFMKFGVNTYLSKH--------------------GCIKYSRQDSITYMENPGL 241
PL V YL H G + + + N L
Sbjct: 204 QLLPL---LTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYL 260
Query: 242 IESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGK 286
+ GF +++ E+ ++ G+ +++T R +
Sbjct: 261 RFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRAR 305
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 2e-07
Identities = 42/205 (20%), Positives = 67/205 (32%), Gaps = 36/205 (17%)
Query: 102 WLFPSLKVPWYTTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGD 161
W+ P+ WY G + A I ++T L P +
Sbjct: 121 WIMPN---YWYHYFTHFTVSSGPSIVKTGHKDLAA-AFIFIDTWVLSSNFP---YKKIHE 173
Query: 162 LLLNWLKSALEATNGQ--WCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYL 219
N LKS L + IVVG P+ PL V+ Y+
Sbjct: 174 KAWNDLKSQLSVAKKIADFIIVVGDQPIYSSGYSRGSSYLAYYLLPL---LKDAEVDLYI 230
Query: 220 SKHG-CIKYSRQDSITYMENPGLIESGNG----------------REMVDGFLLHKVSSL 262
S H ++ + + + I G+G GF +H++S+
Sbjct: 231 SGHDNNMEVIEDNDMAH------ITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNN 284
Query: 263 EILTYFVTLE-GEVVYRTATRERGK 286
I+T FV+ + GEV+Y + K
Sbjct: 285 GIVTKFVSSKKGEVIYTHKLNIKKK 309
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 100.0 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 99.97 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 99.96 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.95 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.95 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.94 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.93 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 99.83 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.77 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.76 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.72 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.7 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.69 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.69 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.66 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.65 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.63 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.56 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.55 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.55 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.51 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.5 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.43 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.4 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.38 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.35 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.35 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.27 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 99.0 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.8 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.77 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.66 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.59 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.44 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.36 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.19 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.14 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.01 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.97 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.74 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.72 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.67 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.62 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.54 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.36 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.41 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.35 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.33 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.27 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.03 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.88 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.16 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 94.85 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.79 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 87.27 |
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=303.81 Aligned_cols=234 Identities=20% Similarity=0.210 Sum_probs=186.9
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCC------CChhhhhhhc-cCC----CCCCCeEEecC
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGE------DDPLKQNATW-LFP----SLKVPWYTTKA 116 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~------~~~~~~~~~~-~~~----~l~~P~~~v~G 116 (289)
.++||+++||.+.|...|..++++|.+++++.+|||||++||+.. .+++|++.++ ++. .+++|||+++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 579999999977888999999999999999999999999999732 3556776664 443 46899999999
Q ss_pred CCcCCCCc----------------------------eeEeEeCCCC-------------------C----eEEEEEEcCC
Q 022941 117 SKEKEVGC----------------------------FQEQIRLPHG-------------------E----ALDIIGVNTG 145 (289)
Q Consensus 117 NHD~~~~~----------------------------~~~~~~~p~~-------------------~----~~~~i~lDt~ 145 (289)
||| +.++ ...+|.+|+. + .++||+|||+
T Consensus 82 NHD-~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~ 160 (342)
T 3tgh_A 82 TRD-WTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTW 160 (342)
T ss_dssp HHH-HTSCHHHHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTT
T ss_pred CCc-cCCCchHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCc
Confidence 999 5543 1235666631 1 4899999998
Q ss_pred CccCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCc
Q 022941 146 SLQGKIPTA-LPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGC 224 (289)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H 224 (289)
.+...++.. ......++|++||+++|+. ++|+||++|||+++.+.+ ++...++++|.++|++|+|+++||||+|
T Consensus 161 ~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~--~~~~IV~~HhP~~~~~~~---~~~~~l~~~l~~ll~~~~VdlvlsGH~H 235 (342)
T 3tgh_A 161 VLSSNFPYKKIHEKAWNDLKSQLSVAKKI--ADFIIVVGDQPIYSSGYS---RGSSYLAYYLLPLLKDAEVDLYISGHDN 235 (342)
T ss_dssp TTSTTCSCHHHHHHHHHHHHHHHHHHHHH--CSEEEEECSSCSSCSSTT---CCCHHHHHHTHHHHHHTTCCEEEECSSS
T ss_pred ccccCCcccccchHHHHHHHHHHHHhhcc--CCcEEEEECCCCCCCCCC---CCcHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 775432200 0123567999999999953 579999999999998765 2335668899999999999999999999
Q ss_pred cce-ecCCCeEEEecCCCCCCCCC----------cccCCcEEEEEEeCcEEEEEEEc-CCCcEEEEEEEecCCcc
Q 022941 225 IKY-SRQDSITYMENPGLIESGNG----------REMVDGFLLHKVSSLEILTYFVT-LEGEVVYRTATRERGKE 287 (289)
Q Consensus 225 ~~~-~~~~gi~~i~~g~~~~~~~g----------~~~~~gf~~v~v~~~~i~~~~~~-~~g~~~~~~~i~~~~~~ 287 (289)
.+. ...+|+.|+++|+++..+.. ....+||.+++++++++++++++ .+|+++|+++|.|+.++
T Consensus 236 ~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 236 NMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp SEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred ceeEEeeCCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 976 55567999999998776421 24689999999999999999999 99999999999998875
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=248.82 Aligned_cols=237 Identities=18% Similarity=0.277 Sum_probs=173.6
Q ss_pred CCccEEEEEEeCCCCCC------hhHHHHHHHHHHHHhhCCccEEEEcCCCCC-------CChhhhhhhc-cCC--CC-C
Q 022941 46 KGLDFYFISVTGGFRPL------EQQTLLLKQMEDVAKSYDARFVINTSELGE-------DDPLKQNATW-LFP--SL-K 108 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~------~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~-------~~~~~~~~~~-~~~--~l-~ 108 (289)
.+++++|+++||.|.+. ..+..+.+.+.++++..+|||||++||+.. .+.+|...++ .+. .+ +
T Consensus 3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 82 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 82 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred CCCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcC
Confidence 35789999999976653 235677777877666779999999999731 2234444443 333 36 7
Q ss_pred CCeEEecCCCcCCCCce--------------------eEeEeCCC-CCeEEEEEEcCCCccCCC---C----CC-CCCCc
Q 022941 109 VPWYTTKASKEKEVGCF--------------------QEQIRLPH-GEALDIIGVNTGSLQGKI---P----TA-LPSAS 159 (289)
Q Consensus 109 ~P~~~v~GNHD~~~~~~--------------------~~~~~~p~-~~~~~~i~lDt~~~~~~~---~----~~-~~~~~ 159 (289)
+|+++++|||| +..++ ...+.+|. +++++||+|||..+.... . .+ ..+.+
T Consensus 83 ~p~~~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~ 161 (313)
T 1ute_A 83 VPWHVLAGNHD-HLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLAL 161 (313)
T ss_dssp CCEEECCCHHH-HHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHH
T ss_pred CCEEEECCCCc-cCCCccccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccch
Confidence 99999999999 32221 11122343 258999999997643211 0 01 12256
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--ecCCCeEEEe
Q 022941 160 GDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--SRQDSITYME 237 (289)
Q Consensus 160 ~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~~~~gi~~i~ 237 (289)
..+|++||++.|++++++|+||++|||++..+.++ ....+++.+.++|++++|+++||||+|.+. ...+|+.|++
T Consensus 162 ~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~---~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~ 238 (313)
T 1ute_A 162 ARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHG---PTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVL 238 (313)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSC---CCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCC---CcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEE
Confidence 78999999999999888899999999999876542 123456789999999999999999999854 4467999999
Q ss_pred cCCCCCCCCC------------------cccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEEEecCCc
Q 022941 238 NPGLIESGNG------------------REMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRERGK 286 (289)
Q Consensus 238 ~g~~~~~~~g------------------~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~i~~~~~ 286 (289)
+|+++..+.. .....||.+++++++.+++++++.+|+++++++|.|+.+
T Consensus 239 ~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~~~g~~~~~~~l~~~~~ 305 (313)
T 1ute_A 239 SGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRAR 305 (313)
T ss_dssp ECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCEEEEEEECCCC-
T ss_pred ECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEEcCEEEEEEEcCCCcEEEEEEeccccC
Confidence 9987653211 012379999999999999999999999999999998764
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=241.06 Aligned_cols=225 Identities=16% Similarity=0.156 Sum_probs=158.8
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-CCccEEEEcCCCCCC-------ChhhhhhhccCCC--CCCCeEEec
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-YDARFVINTSELGED-------DPLKQNATWLFPS--LKVPWYTTK 115 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~-------~~~~~~~~~~~~~--l~~P~~~v~ 115 (289)
...++||+++||.+.+... .+.+.++.+. .+|||||++||+... +..|..+.+.+.. ..+|+++++
T Consensus 123 ~~~~~~f~~~gD~~~~~~~----~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~ 198 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHDS----NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTA 198 (426)
T ss_dssp TTCCEEEEEECSCTTBHHH----HHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCC
T ss_pred CCCCeEEEEEEeCCCCCch----HHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEec
Confidence 4678999999996654221 2233344433 489999999998643 2345544333322 278999999
Q ss_pred CCCcCCCC-------c---eeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 116 ASKEKEVG-------C---FQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 116 GNHD~~~~-------~---~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
||||.... . +.++|.+|. .++++|++|||.... ....+|++||+++|
T Consensus 199 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~---------~~~~~Q~~WL~~~L 269 (426)
T 1xzw_A 199 GNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGF---------VKYSPQYKWFTSEL 269 (426)
T ss_dssp CGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCC---------STTSHHHHHHHHHH
T ss_pred cccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccC---------CCCHHHHHHHHHHH
Confidence 99994321 1 223455552 256899999986421 23578999999999
Q ss_pred hhc---CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ec------------------
Q 022941 172 EAT---NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SR------------------ 229 (289)
Q Consensus 172 ~~~---~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~------------------ 229 (289)
++. +.+|+||++|+|+++.+.. ...+...+++.|.++|++++|+++||||+|.+. ..
T Consensus 270 ~~~~~~~~~w~Iv~~H~P~~~~~~~-~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~ 348 (426)
T 1xzw_A 270 EKVNRSETPWLIVLVHAPLYNSYEA-HYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVS 348 (426)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBST-TTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEE
T ss_pred HhhhhcCCCEEEEEeccCceeCCCc-ccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCcccccc
Confidence 985 3569999999999986542 112234568899999999999999999999965 11
Q ss_pred -CCCeEEEecCCCCCCC--C--------C----cccCCcEEEEEEeC-cEEEEEEE-cCCCc--EEEEEEEecC
Q 022941 230 -QDSITYMENPGLIESG--N--------G----REMVDGFLLHKVSS-LEILTYFV-TLEGE--VVYRTATRER 284 (289)
Q Consensus 230 -~~gi~~i~~g~~~~~~--~--------g----~~~~~gf~~v~v~~-~~i~~~~~-~~~g~--~~~~~~i~~~ 284 (289)
.+++.||++|+++... . . ....+||..+++.+ ..+.++++ +.+|+ +.|+++|.|+
T Consensus 349 ~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 349 DESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp CTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECS
T ss_pred CCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEec
Confidence 2578899998865421 0 0 34579999999955 46999998 57887 8999999986
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=231.21 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-CCccEEEEcCCCCCCC-------hhhhhhhccCCC--CCCCeEEec
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-YDARFVINTSELGEDD-------PLKQNATWLFPS--LKVPWYTTK 115 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~-------~~~~~~~~~~~~--l~~P~~~v~ 115 (289)
...++||+++||.+.+... .+.+..+.+. .+|||||++||+...+ ..|+.+.+.++. ..+|+++++
T Consensus 116 ~~~~~~f~~igD~~~~~~~----~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~ 191 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFDS----NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTA 191 (424)
T ss_dssp TTCCEEEEEECSCTTBHHH----HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECC
T ss_pred CCCCeEEEEEEeCCCCCCh----HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeec
Confidence 4578999999997654321 1234444443 3899999999986532 244433332222 158999999
Q ss_pred CCCcCCC----C---c---eeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 116 ASKEKEV----G---C---FQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 116 GNHD~~~----~---~---~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
||||... + . +.++|.+|. .++++|++|||.... ....+|++||+++|
T Consensus 192 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~---------~~~~~Q~~WL~~~L 262 (424)
T 2qfp_A 192 GNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAY---------GRGTPQYTWLKKEL 262 (424)
T ss_dssp CHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCC---------STTSHHHHHHHHHH
T ss_pred CCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccC---------CCcHHHHHHHHHHH
Confidence 9999322 1 1 123344541 246899999986421 12348999999999
Q ss_pred hhcC---CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e-c-----------------
Q 022941 172 EATN---GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S-R----------------- 229 (289)
Q Consensus 172 ~~~~---~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~-~----------------- 229 (289)
++.+ .+|+||++|+|+++.... ...+...+++.|.++|++++|+++||||+|.+. . .
T Consensus 263 ~~~~~~~~~~~Iv~~H~P~~~~~~~-~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~ 341 (424)
T 2qfp_A 263 RKVKRSETPWLIVLMHSPLYNSYNH-HFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVK 341 (424)
T ss_dssp HHCCTTTCCEEEEECSSCSSCCBST-TTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEE
T ss_pred hhhcccCCCEEEEEeCcCceecCcc-cccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCcccccc
Confidence 9853 469999999999986532 112234567899999999999999999999955 1 1
Q ss_pred -CCCeEEEecCCCCCC------CC----C----cccCCcEEEEEEeC-cEEEEEEE-cCCCcEE--EEEEEecCC
Q 022941 230 -QDSITYMENPGLIES------GN----G----REMVDGFLLHKVSS-LEILTYFV-TLEGEVV--YRTATRERG 285 (289)
Q Consensus 230 -~~gi~~i~~g~~~~~------~~----g----~~~~~gf~~v~v~~-~~i~~~~~-~~~g~~~--~~~~i~~~~ 285 (289)
.+++.||++|+++.. +. . +...+||..+++.+ ..+.++++ +.+|+++ |+++|.|+.
T Consensus 342 ~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~ 416 (424)
T 2qfp_A 342 DQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 416 (424)
T ss_dssp CTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTT
T ss_pred CCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEecc
Confidence 246789999876543 10 0 23578999999954 56899987 5789874 999999874
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=208.56 Aligned_cols=215 Identities=12% Similarity=0.109 Sum_probs=149.8
Q ss_pred EEEEEEeCCCCCC---------hhHHHHHHHHHHHHhh-CCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCC
Q 022941 50 FYFISVTGGFRPL---------EQQTLLLKQMEDVAKS-YDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKAS 117 (289)
Q Consensus 50 ~~f~~~gD~~~g~---------~~~~~~~~~l~~~~~~-~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GN 117 (289)
+||++++|.|.+. .....+.+.+..+.+. .+||+||++||+..... .|+...+.++.+++|+++++||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4899999977653 1123444445444433 36899999999865432 3444455667788999999999
Q ss_pred CcCCCCce----eE------------eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEE
Q 022941 118 KEKEVGCF----QE------------QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIV 181 (289)
Q Consensus 118 HD~~~~~~----~~------------~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV 181 (289)
||. ...+ .. .+.. ..++++|+++|+..... ..+.+.++|++||++.|++.+++++||
T Consensus 81 HD~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~ld~~~~~~-----~~~~~~~~~~~wl~~~l~~~~~~~~iv 153 (274)
T 3d03_A 81 HDD-KALFLEYLQPLCPQLGSDANNMRCAV-DDFATRLLFIDSSRAGT-----SKGWLTDETISWLEAQLFEGGDKPATI 153 (274)
T ss_dssp TSC-HHHHHHHHGGGSGGGCSCGGGCCEEE-CSSSSEEEECCCCCTTC-----SSBCCCHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCC-HHHHHHHhhhhhcCcccCCCceEEEE-EeCCEEEEEEeCCCCCC-----CCCeeCHHHHHHHHHHHHhCCCCCEEE
Confidence 993 2111 00 0111 23569999999975431 224677899999999999877779999
Q ss_pred EeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCC---------Cccc
Q 022941 182 VGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGN---------GREM 250 (289)
Q Consensus 182 ~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~---------g~~~ 250 (289)
++|||++..+............+.+.++++++ +|+++||||+|.+. ...+|+.++++++++..+. ....
T Consensus 154 ~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~ 233 (274)
T 3d03_A 154 FMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLS 233 (274)
T ss_dssp EESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCC
T ss_pred EECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccccccccC
Confidence 99999987653211111112356788999999 89999999999965 5567888888877654321 1235
Q ss_pred CCcEEEEEEeCcEEEEEEEcC
Q 022941 251 VDGFLLHKVSSLEILTYFVTL 271 (289)
Q Consensus 251 ~~gf~~v~v~~~~i~~~~~~~ 271 (289)
++||+++++++++++++++..
T Consensus 234 ~~gy~i~~i~~~~~~~~~~~~ 254 (274)
T 3d03_A 234 PASCLMHRQVGEQWVSYQHSL 254 (274)
T ss_dssp CCEEEEEEEETTEEEEEEEEC
T ss_pred CCceEEEEEeCCcEEEEEEec
Confidence 789999999999999888765
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=214.52 Aligned_cols=222 Identities=14% Similarity=0.113 Sum_probs=154.0
Q ss_pred CCCCccEEEEEEeCCCCCCh---------hHHHHHHHHHHHHh-hCCccEEEEcCCCCCCCh--hhhhhhccC----CCC
Q 022941 44 NRKGLDFYFISVTGGFRPLE---------QQTLLLKQMEDVAK-SYDARFVINTSELGEDDP--LKQNATWLF----PSL 107 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~---------~~~~~~~~l~~~~~-~~~pdfvv~~GD~~~~~~--~~~~~~~~~----~~l 107 (289)
+....+++|+++||.|.+.. ....+.+.+..+.+ ..+||+||++||+..... .|+...+.+ +.+
T Consensus 20 ~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 20 EHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp SSCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 34567899999999775321 23334444444333 268999999999865432 333333333 334
Q ss_pred CCCeEEecCCCcCCCCceeEeE-----------eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 022941 108 KVPWYTTKASKEKEVGCFQEQI-----------RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNG 176 (289)
Q Consensus 108 ~~P~~~v~GNHD~~~~~~~~~~-----------~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~ 176 (289)
++|++.++|||| +...+.+.+ .....++++|+++|+.... ...+.+..+|++||++.|+....
T Consensus 100 ~~pv~~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~-----~~~~~~~~~q~~wl~~~l~~~~~ 173 (330)
T 3ib7_A 100 GAELVWVMGNHD-DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPG-----HHHGEIRASQLGWLAEELATPAP 173 (330)
T ss_dssp TCEEEECCCTTS-CHHHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTT-----CCSBCCCHHHHHHHHHHTTSCCT
T ss_pred CCCEEEeCCCCC-CHHHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCC-----CCCCccCHHHHHHHHHHHHhccc
Confidence 899999999999 432211100 0111356899999997532 12346789999999999998877
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCC-----CC---
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESG-----NG--- 247 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~-----~g--- 247 (289)
+++|+++|||++...............+.+.+++++++|+++||||+|... ...+|+.++.+|+.+... .|
T Consensus 174 ~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~ 253 (330)
T 3ib7_A 174 DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTR 253 (330)
T ss_dssp TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCC
T ss_pred CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCccee
Confidence 789999999998765431111112235788899999999999999999965 667899999998876541 11
Q ss_pred -cccCCcEEEEEEeCcEEEEEEEcC
Q 022941 248 -REMVDGFLLHKVSSLEILTYFVTL 271 (289)
Q Consensus 248 -~~~~~gf~~v~v~~~~i~~~~~~~ 271 (289)
....+||.++++++++++++++..
T Consensus 254 ~~~~~~gy~iv~i~~~~~~~~~v~~ 278 (330)
T 3ib7_A 254 GRDGAQGCNLVHVYPDTVVHSVIPL 278 (330)
T ss_dssp EESCSCEEEEEEECSSCEEEEEEEC
T ss_pred ccCCCCceEEEEEECCCeEEEEecc
Confidence 245689999999999999999874
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-27 Score=208.63 Aligned_cols=218 Identities=10% Similarity=0.049 Sum_probs=148.3
Q ss_pred CccEEEEEEeCCCCCChh----------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--------hhhhhhc
Q 022941 47 GLDFYFISVTGGFRPLEQ----------------QTLLLKQMEDVAKSYDARFVINTSELGEDDP--------LKQNATW 102 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~----------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--------~~~~~~~ 102 (289)
+..++|++++|.|.+... ...+.+.+..+ ++.+||+||++||+..... .++...+
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~ 81 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW-RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMA 81 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHH-HHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHH-HhcCCCEEEECCCccCCCCCcchHHHHHHHHHHH
Confidence 467999999997765411 12333334433 3478999999999865432 2222334
Q ss_pred cCCCCCCCeEEecCCCcCCC---CceeEeE-------------eCC---------C-CCeEEEEEEcCCCccCCC-----
Q 022941 103 LFPSLKVPWYTTKASKEKEV---GCFQEQI-------------RLP---------H-GEALDIIGVNTGSLQGKI----- 151 (289)
Q Consensus 103 ~~~~l~~P~~~v~GNHD~~~---~~~~~~~-------------~~p---------~-~~~~~~i~lDt~~~~~~~----- 151 (289)
.+..+++|+++++||||.+. ..+.+.+ .+| . .++++||++|+..+...-
T Consensus 82 ~l~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~ 161 (322)
T 2nxf_A 82 ELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEES 161 (322)
T ss_dssp HHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTS
T ss_pred HHHhcCCcEEEecCCCCcccCCHHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceecccccCCCC
Confidence 55667899999999999421 0110000 011 1 267899999997642100
Q ss_pred --------------CC-----CC-------------CCCcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchh
Q 022941 152 --------------PT-----AL-------------PSASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQL 197 (289)
Q Consensus 152 --------------~~-----~~-------------~~~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~ 197 (289)
+. .+ .+.+.++|++||+++|++++ .+++||++|||++...... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~--~ 239 (322)
T 2nxf_A 162 EKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADP--I 239 (322)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCG--G
T ss_pred hhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCCc--c
Confidence 00 00 13567899999999999875 5689999999998766421 0
Q ss_pred hHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ec-CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 198 EAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SR-QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 198 ~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~-~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
......+.+.++++++ +|+++||||+|.+. .. .+|++|+++|+.... .....||.++++++++++++.++
T Consensus 240 ~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~---~~~~~~y~~v~~~~~~~~~~~~~ 312 (322)
T 2nxf_A 240 CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET---PPHSHAFATAYLYEDRMVMKGRG 312 (322)
T ss_dssp GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC---CTTSCEEEEEEECSSEEEEEEEE
T ss_pred ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhC---CCCCCcEEEEEEECCeEEEEecc
Confidence 1111356788999999 79999999999966 44 789999998887432 23568999999999999998875
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=207.06 Aligned_cols=220 Identities=10% Similarity=0.024 Sum_probs=141.0
Q ss_pred CCCccEEEEEEeCCCCCChh----------------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQ----------------------QTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNA 100 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~----------------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~ 100 (289)
..+..++|++++|.|.+... .....+.+.+.++..+||+||++||+..... .++..
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~ 114 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEEL 114 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHH
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHH
Confidence 35678999999998765321 1233333333344568999999999865332 33333
Q ss_pred hccCCC---CCCCeEEecCCCcCCCCceeE-------------------------------------eEeCCCCCeEEEE
Q 022941 101 TWLFPS---LKVPWYTTKASKEKEVGCFQE-------------------------------------QIRLPHGEALDII 140 (289)
Q Consensus 101 ~~~~~~---l~~P~~~v~GNHD~~~~~~~~-------------------------------------~~~~p~~~~~~~i 140 (289)
.+.+.. .++|+++++||||...+.... .+.....++++++
T Consensus 115 ~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 115 AKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 333333 378999999999943221100 0000114679999
Q ss_pred EEcCCCccCC---CCCCCCCCcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCC
Q 022941 141 GVNTGSLQGK---IPTALPSASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGV 215 (289)
Q Consensus 141 ~lDt~~~~~~---~~~~~~~~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V 215 (289)
+||+...... .+....+.+.++|++||++.|++.+ ..++||++|||++...............+.+.+++++++|
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 9999864321 0111224677899999999998764 3578999999998754321000111235678899999999
Q ss_pred eEEEeCCCccce-e---cCCC--eEEEecCCCCCCCCCcccCCcEEEEEEeCcE--EEEEEEc
Q 022941 216 NTYLSKHGCIKY-S---RQDS--ITYMENPGLIESGNGREMVDGFLLHKVSSLE--ILTYFVT 270 (289)
Q Consensus 216 ~~vl~GH~H~~~-~---~~~g--i~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~--i~~~~~~ 270 (289)
+++||||.|.+. . ..+| +..+.+|+.+ ..+.+|.+++++++. ++++.+.
T Consensus 275 ~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~------~~p~~y~il~i~~~~~~~~~~~~~ 331 (443)
T 2xmo_A 275 DFSLSGHIHTQNIRSAKSTDGKEITDIVTNALS------VFPHKYGNITYSAKNKNFTYQSQK 331 (443)
T ss_dssp CEEEECSSCSCEEEEEECTTSCEEEEEECCCTT------STTCEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEECCcccCchhhcccCCCCceEEEEcCccc------cCCCCeEEEEEeCCCceEEEEEEE
Confidence 999999999955 2 1233 4555555543 246899999999876 6666654
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-20 Score=174.46 Aligned_cols=216 Identities=10% Similarity=0.067 Sum_probs=138.1
Q ss_pred CccEEEEEEeCCCC--CChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-----------------------hhhhhh
Q 022941 47 GLDFYFISVTGGFR--PLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-----------------------LKQNAT 101 (289)
Q Consensus 47 ~~~~~f~~~gD~~~--g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-----------------------~~~~~~ 101 (289)
..+++|+++||.+. |.. . ++..++ +.+|||||++||+...+. .|+..|
T Consensus 114 ~~~~rfa~~sc~~~~~g~~---~---~~~~ia-~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y 186 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGYY---T---AYKHMA-KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRH 186 (527)
T ss_dssp CCCEEEEEECCCCGGGCCC---H---HHHHHT-TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHH
T ss_pred CCCeEEEEEecCCCCCCcc---H---HHHHHH-hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHH
Confidence 47899999999443 221 1 222233 368999999999743211 122222
Q ss_pred ccC---CCC-----CCCeEEecCCCcCCCCceeE----------------------eE-eCC-------C----------
Q 022941 102 WLF---PSL-----KVPWYTTKASKEKEVGCFQE----------------------QI-RLP-------H---------- 133 (289)
Q Consensus 102 ~~~---~~l-----~~P~~~v~GNHD~~~~~~~~----------------------~~-~~p-------~---------- 133 (289)
..+ +.+ .+|++++.|||| +..++.. .| .+| .
T Consensus 187 ~~~~~dp~lq~~~a~~P~i~~wDDHE-~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf 265 (527)
T 2yeq_A 187 AQYRSDANLKAAHAAFPWVVTWDDHE-VENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHF 265 (527)
T ss_dssp HHHHTCHHHHHHHHHSEEEECCCSTT-TSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEE
T ss_pred HHHhCCHHHHHHHhcCCEEEeccccc-ccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEE
Confidence 211 112 589999999999 4333210 01 122 1
Q ss_pred -CCe-EEEEEEcCCCccCCCC-------------CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccc-----
Q 022941 134 -GEA-LDIIGVNTGSLQGKIP-------------TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEH----- 193 (289)
Q Consensus 134 -~~~-~~~i~lDt~~~~~~~~-------------~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~----- 193 (289)
.+. ++|++|||..+..... +.....++++|++||+++|++++++|+||++|+|++.....
T Consensus 266 ~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s~~p~~~~~~~~g~~~ 345 (527)
T 2yeq_A 266 TYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASP 345 (527)
T ss_dssp EETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHCCSSEEEEECSSCCSCCCSSCSSSC
T ss_pred EcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcCCCCeEEEEeCCcccccccCCCccc
Confidence 134 8999999986543211 01123578999999999999998999999999999876421
Q ss_pred ----cchhhHHhhHHHHHHHHHHhCC--eEEEeCCCccce-e--c-C-----C---CeEEEecCCCCCCC-----C----
Q 022941 194 ----EEQLEAKKIYEPLHHIFMKFGV--NTYLSKHGCIKY-S--R-Q-----D---SITYMENPGLIESG-----N---- 246 (289)
Q Consensus 194 ----~~~~~~~~~~~~l~~ll~~~~V--~~vl~GH~H~~~-~--~-~-----~---gi~~i~~g~~~~~~-----~---- 246 (289)
..+......+++|+++|.+++| .++||||.|.+. . . . . ++.|++++-.+... .
T Consensus 346 ~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~ 425 (527)
T 2yeq_A 346 IYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQ 425 (527)
T ss_dssp CEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTHHH
T ss_pred ccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhhhh
Confidence 1111223458899999999998 499999999965 1 1 1 1 46666543222110 0
Q ss_pred -----C----cccCCcEEEEEEeCcEEEEEEEc
Q 022941 247 -----G----REMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 247 -----g----~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
. .....||.+++++++++.++++.
T Consensus 426 ~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~ 458 (527)
T 2yeq_A 426 ILKENPHIQFFNDYRGYVRCTVTPHQWKADYRV 458 (527)
T ss_dssp HHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEE
T ss_pred hhhcCCcceeeeCCCCEEEEEEeccEEEEEEEE
Confidence 0 12478999999999999998875
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=144.23 Aligned_cols=196 Identities=10% Similarity=-0.029 Sum_probs=114.8
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h--hhhhhhccCCCCCCCeEEecCCCcCCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-P--LKQNATWLFPSLKVPWYTTKASKEKEVGC 124 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~--~~~~~~~~~~~l~~P~~~v~GNHD~~~~~ 124 (289)
..+|++++||.|.+... .+.+.+.+++.+||+||++||+.... . .+.+..+.+.++++|+++++||||.....
T Consensus 4 ~~mri~~iSD~H~~~~~----~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~ 79 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEA----LEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWE 79 (228)
T ss_dssp CCCEEEEEECCTTCHHH----HHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHH
T ss_pred ceEEEEEEeeccCCHHH----HHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhHH
Confidence 35899999998865322 22222233345899999999986543 1 23333455566688999999999943211
Q ss_pred -eeE----------eEeCCC-----CCeEEEEEEcCCCccC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccc
Q 022941 125 -FQE----------QIRLPH-----GEALDIIGVNTGSLQG-KIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPL 187 (289)
Q Consensus 125 -~~~----------~~~~p~-----~~~~~~i~lDt~~~~~-~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~ 187 (289)
+.+ .+.+.. .+++.++++++..... .+...........+.+|+++.|++..+.+.|+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~il~~H~p~ 159 (228)
T 1uf3_A 80 YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159 (228)
T ss_dssp HHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCB
T ss_pred HHHhhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCCCCeEEEEccCc
Confidence 000 011111 1267888887542111 00000000111223344555555554568999999999
Q ss_pred cccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeC
Q 022941 188 VICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIESGNGREMVDGFLLHKVSS 261 (289)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~ 261 (289)
+..... .. ....+.++++++++++++|||+|......+++.++.+|+.+ ..+|.++++++
T Consensus 160 ~~~~~~--~~----~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~in~Gs~~--------~~~~~i~~~~~ 219 (228)
T 1uf3_A 160 YHKGLN--EQ----GSHEVAHLIKTHNPLLVLVAGKGQKHEMLGASWVVVPGDLS--------EGEYSLLDLRA 219 (228)
T ss_dssp CBTTTB--TT----SBHHHHHHHHHHCCSEEEECCSSCEEEEETTEEEEECCBGG--------GTEEEEEETTT
T ss_pred ccCCcc--cc----CHHHHHHHHHHhCCCEEEEcccccCccccCCceEEEecccC--------CCceEEEEecc
Confidence 764211 00 12356678888999999999999422344567666655542 46899999876
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=144.00 Aligned_cols=206 Identities=7% Similarity=0.001 Sum_probs=115.9
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChh-----------------------------hhh
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPL-----------------------------KQN 99 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~-----------------------------~~~ 99 (289)
.+||+++||.|.+...-.++.+ .++..+||+||++||+...... +.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~----~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKG----VIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHH----HHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHH----HHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHH
Confidence 5799999998876533222222 2334589999999999764432 111
Q ss_pred hhccCCCCCCCeEEecCCCcCCCCc----e-eE-e-----EeC-----CCCCeEEEEEEcCCCccCCCCCCCCCC-cHHH
Q 022941 100 ATWLFPSLKVPWYTTKASKEKEVGC----F-QE-Q-----IRL-----PHGEALDIIGVNTGSLQGKIPTALPSA-SGDL 162 (289)
Q Consensus 100 ~~~~~~~l~~P~~~v~GNHD~~~~~----~-~~-~-----~~~-----p~~~~~~~i~lDt~~~~~~~~~~~~~~-~~~~ 162 (289)
..+.+..+++|+++++||||.+... . .. . ..+ ..-++++|++++.......+....... ....
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 160 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWY 160 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHH
T ss_pred HHHHHHhcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhh
Confidence 2233445578999999999943211 0 00 0 000 011357788887543211110000000 0011
Q ss_pred HHHHHHHHHhhcCCCeEEEEeeccccccccccc-hhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCC
Q 022941 163 LLNWLKSALEATNGQWCIVVGFHPLVICEEHEE-QLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPG 240 (289)
Q Consensus 163 Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~-~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~ 240 (289)
..+|| +.|++.+....|+++|+|++....... ........+.+.++++++++++++|||+| .. ...+++.++.+|+
T Consensus 161 ~~~~l-~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in~Gs 238 (260)
T 2yvt_A 161 VEYIL-KFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVNPGE 238 (260)
T ss_dssp HHHHG-GGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEECCB
T ss_pred HHHHH-HHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEeCCC
Confidence 12455 445544445789999999875311100 00000112456778889999999999999 43 3345666666555
Q ss_pred CCCCCCCcccCCcEEEEEEeCcEEEEEE
Q 022941 241 LIESGNGREMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 241 ~~~~~~g~~~~~gf~~v~v~~~~i~~~~ 268 (289)
.+. .+|.+++++++++++.-
T Consensus 239 ~~~--------g~~~ii~~~~~~~~~~~ 258 (260)
T 2yvt_A 239 FEE--------GRYAFLDLTQHKIKLEQ 258 (260)
T ss_dssp GGG--------TEEEEEETTTTEEEEEE
T ss_pred CCC--------CceEEEEEcCCEEEeee
Confidence 421 38999999888777653
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6e-17 Score=145.98 Aligned_cols=231 Identities=9% Similarity=-0.017 Sum_probs=129.7
Q ss_pred CCccEEEEEEeCCCCC----C--------hhHHHHHHHHHHHHhhCCccEEEEcCC-CCCCCh---h-hhhhhccCCCCC
Q 022941 46 KGLDFYFISVTGGFRP----L--------EQQTLLLKQMEDVAKSYDARFVINTSE-LGEDDP---L-KQNATWLFPSLK 108 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g----~--------~~~~~~~~~l~~~~~~~~pdfvv~~GD-~~~~~~---~-~~~~~~~~~~l~ 108 (289)
....+||++++|.|.| . ..+....+.+.+.+++.+||+||++|| +..... . .+...+.+..+.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4578999999998866 2 123455556656666679999999999 754221 1 122233444443
Q ss_pred --CCeEEecCCCcCCCCc----eeE--e--EeC-----------CCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHH
Q 022941 109 --VPWYTTKASKEKEVGC----FQE--Q--IRL-----------PHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWL 167 (289)
Q Consensus 109 --~P~~~v~GNHD~~~~~----~~~--~--~~~-----------p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL 167 (289)
+|+++++||||....+ +.+ . +.+ ..++++.+++++...... . .........+|++|+
T Consensus 95 ~~~pv~~i~GNHD~~~~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~-~-~~~~~~~~~~~~~~~ 172 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESE-A-LRKNEGDFRFFLESR 172 (336)
T ss_dssp HHSCEEECCC------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC---------CCSSHHHHHHHHH
T ss_pred hcCCEEEECCCCCccccccHHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHH-H-HHHhhHHHHHHHHHH
Confidence 8999999999933200 000 0 111 113467777775432110 0 000123456789999
Q ss_pred HHHHhh---cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCC
Q 022941 168 KSALEA---TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIE 243 (289)
Q Consensus 168 ~~~L~~---~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~ 243 (289)
.+.|.. .++.+.|+++|+|+....... +...-....+...+.+.++|++++||.|... ... +...+.+|+...
T Consensus 173 ~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~--~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-~~~i~y~GS~~~ 249 (336)
T 2q8u_A 173 LNKLYEEALKKEDFAIFMGHFTVEGLAGYA--GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-QPLTIYPGSLIR 249 (336)
T ss_dssp HHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEEEEE-TTEEEECCCSSC
T ss_pred HHHHHHhccCCCCCEEEEECccccCCCCCC--CccchhhcccCHHHccccCCEEEEccccCceEeCC-CccEEECCCCcC
Confidence 888875 345689999999987533210 0000000001011334689999999999955 322 233444555432
Q ss_pred CCCC-cccCCcEEEEEEeCc-EEEEEEEcCCCcEEEEEEE
Q 022941 244 SGNG-REMVDGFLLHKVSSL-EILTYFVTLEGEVVYRTAT 281 (289)
Q Consensus 244 ~~~g-~~~~~gf~~v~v~~~-~i~~~~~~~~g~~~~~~~i 281 (289)
...+ .....||.+++++++ .++++++....+.+.++++
T Consensus 250 ~s~~e~~~~~~~~lv~i~~~~~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 250 IDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp CSGGGTTCCCEEEEEEEETTSCCEEEEEECCCCCEEEEEE
T ss_pred CCccccCCCCEEEEEEEeCCCccEEEEEECCCEEEEEeec
Confidence 2111 224789999999976 4888888876677777665
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.4e-16 Score=127.55 Aligned_cols=165 Identities=10% Similarity=-0.026 Sum_probs=110.6
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEe
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
..+++++||.|. . ...+.+.+.. .+. ++|+|+++||+.. +.+..+..|++.|+|||| +...
T Consensus 6 ~m~i~~isD~H~-~--~~~~~~~~~~-~~~-~~d~i~~~GD~~~---------~~l~~l~~~~~~v~GNhD-~~~~---- 66 (176)
T 3ck2_A 6 KQTIIVMSDSHG-D--SLIVEEVRDR-YVG-KVDAVFHNGDSEL---------RPDSPLWEGIRVVKGNMD-FYAG---- 66 (176)
T ss_dssp CEEEEEECCCTT-C--HHHHHHHHHH-HTT-TSSEEEECSCCCS---------CTTCGGGTTEEECCCTTC-CSTT----
T ss_pred CcEEEEEecCCC-C--HHHHHHHHHH-hhc-CCCEEEECCCCch---------HHHHhhhCCeEEecCccc-chhc----
Confidence 479999999873 2 2223333333 233 8999999999732 112222238999999999 3321
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
+|. ...+ .-...+|+++|+|++..... .+.+.+
T Consensus 67 --~p~---~~~~---------------------------------~~~~~~i~~~Hg~~~~~~~~---------~~~l~~ 99 (176)
T 3ck2_A 67 --YPE---RLVT---------------------------------ELGSTKIIQTHGHLFDINFN---------FQKLDY 99 (176)
T ss_dssp --CCS---EEEE---------------------------------EETTEEEEEECSGGGTTTTC---------SHHHHH
T ss_pred --CCc---EEEE---------------------------------EECCeEEEEECCCccCCCCC---------HHHHHH
Confidence 121 0000 01246899999998653311 134667
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEE
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTA 280 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~ 280 (289)
++++++++++++||+|.+. ...+++.++..|+.+.+..+ ....+|.+++++++++++++++.+|+++.+++
T Consensus 100 ~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~-~~~~~y~il~~~~~~~~v~~~~~~~~~~~~~~ 171 (176)
T 3ck2_A 100 WAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGT-IRECLYARVEIDDSYFKVDFLTRDHEVYPGLS 171 (176)
T ss_dssp HHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTT-CCSCCEEEEEECSSEEEEEEECTTSCBCTTCC
T ss_pred HHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCC-CCCCeEEEEEEcCCEEEEEEEEECCEEcchhh
Confidence 7788999999999999965 55678888888887654311 12389999999999999999999998877544
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-16 Score=130.91 Aligned_cols=178 Identities=16% Similarity=0.171 Sum_probs=111.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
.-.+++++||.|.+.... .+.+.+.+..+..++|+|+++||+.. . +.++.+..+..|++.|+||||. ..
T Consensus 9 ~mm~i~~iSD~H~~~~~~-~~~~~l~~~~~~~~~d~ii~~GDl~~--~---~~~~~l~~~~~~~~~v~GNhD~-~~---- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCN-SLPAKFKKLLVPGKIQHILCTGNLCT--K---ESYDYLKTLAGDVHIVRGDFDE-NL---- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCS-SCCHHHHTTCCTTSCSEEEECSCCBS--H---HHHHHHHHHCSEEEECCCTTCC-CT----
T ss_pred cceEEEEEecCCCCccch-hHHHHHHHHhccCCCCEEEEcCCCCC--H---HHHHHHHhcCCCEEEEcCCcCc-cc----
Confidence 348999999977542110 11122333334467999999999864 1 2233333445689999999993 21
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHH
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLH 207 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~ 207 (289)
.+|. ...+ .-..+.|+++|.+++.... + .+.+.
T Consensus 78 --~lp~---~~~~---------------------------------~~~~~~i~l~Hg~~~~~~~-----~----~~~l~ 110 (192)
T 1z2w_A 78 --NYPE---QKVV---------------------------------TVGQFKIGLIHGHQVIPWG-----D----MASLA 110 (192)
T ss_dssp --TSCS---EEEE---------------------------------EETTEEEEEECSCCCCBTT-----C----HHHHH
T ss_pred --cCCc---ceEE---------------------------------EECCEEEEEECCCcCCCCC-----C----HHHHH
Confidence 1111 0000 0124689999955543221 1 23455
Q ss_pred HHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC--cccCCcEEEEEEeCcEEEEEEEcCCC-cE-EEEEEEe
Q 022941 208 HIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG--REMVDGFLLHKVSSLEILTYFVTLEG-EV-VYRTATR 282 (289)
Q Consensus 208 ~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g--~~~~~gf~~v~v~~~~i~~~~~~~~g-~~-~~~~~i~ 282 (289)
.++++.+++++++||+|... ...+++.++.+|+.+.++.. ....++|.++++++++++++++..++ ++ +.+.+.+
T Consensus 111 ~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~ 190 (192)
T 1z2w_A 111 LLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYK 190 (192)
T ss_dssp HHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEc
Confidence 67777899999999999965 55678989988887654211 23468999999999999999988654 33 4444444
Q ss_pred c
Q 022941 283 E 283 (289)
Q Consensus 283 ~ 283 (289)
|
T Consensus 191 ~ 191 (192)
T 1z2w_A 191 K 191 (192)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-17 Score=136.75 Aligned_cols=185 Identities=10% Similarity=0.110 Sum_probs=113.8
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
+...+++++||.|.+... ..+.+.+.++.+..++|+|+++||+.. . +.++.+.++..|++.|+||||.......
T Consensus 23 ~m~m~i~~iSD~H~~~~~-~~l~~~l~~~~~~~~~D~vi~~GDl~~--~---~~l~~l~~~~~~v~~V~GNHD~~~~~~~ 96 (215)
T 2a22_A 23 DFGDLVLLIGDLKIPYGA-KELPSNFRELLATDKINYVLCTGNVCS--Q---EYVEMLKNITKNVYIVSGDLDSAIFNPD 96 (215)
T ss_dssp CCCEEEEEECCCCTTTTC-SSCCGGGHHHHHCTTCCEEEECSCCCC--H---HHHHHHHHHCSCEEECCCTTCCSCCBCC
T ss_pred ccCcEEEEEecCCCCCCh-HHHHHHHHHHHhcCCCCEEEECCCCCC--H---HHHHHHHHcCCCEEEecCCCcCcccccC
Confidence 446899999997764321 111222333334568999999999874 1 2233344455799999999993332210
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
| .+...+ +. .........+|+++|.+++.... + .+.+
T Consensus 97 -----~-------------~~~~~l---p~-------------~~~~~~~~~~i~l~Hg~~~~~~~-----~----~~~l 133 (215)
T 2a22_A 97 -----P-------------ESNGVF---PE-------------YVVVQIGEFKIGLMHGNQVLPWD-----D----PGSL 133 (215)
T ss_dssp -----G-------------GGTBCC---CS-------------EEEEEETTEEEEEECSTTSSSTT-----C----HHHH
T ss_pred -----h-------------hhHhhC---Cc-------------eEEEecCCeEEEEEcCCccCCCC-----C----HHHH
Confidence 0 000000 00 00001134689999965543221 1 2345
Q ss_pred HHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCC--CcccCCcEEEEEEeCcEEEEEEEcCC-CcE-EEEEE
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGN--GREMVDGFLLHKVSSLEILTYFVTLE-GEV-VYRTA 280 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~--g~~~~~gf~~v~v~~~~i~~~~~~~~-g~~-~~~~~ 280 (289)
..++++.+++++++||+|... ...+++.++..|+.+.++. .....++|.++++++++++++++..+ |++ +.+.+
T Consensus 134 ~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~ 212 (215)
T 2a22_A 134 EQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSE 212 (215)
T ss_dssp HHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEE
Confidence 567777899999999999965 5557888888888765421 12346899999999999999998865 443 34333
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=137.02 Aligned_cols=212 Identities=8% Similarity=-0.061 Sum_probs=117.6
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHH--hhC--CccEEEEcCCCCCCChhhhhhhccCCCCC--CCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVA--KSY--DARFVINTSELGEDDPLKQNATWLFPSLK--VPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~--~~~--~pdfvv~~GD~~~~~~~~~~~~~~~~~l~--~P~~~v~GNHD~~~~ 123 (289)
.+++++||.|... ..+.+.+..+. ... ++|+|+++||+...++.-.+..+.+.++. .|+++++||||....
T Consensus 2 m~i~~isD~H~~~---~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNL---PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCH---HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCH---HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 4799999987532 22333333332 034 79999999998754432222333333332 589999999993221
Q ss_pred ceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCeEEEEeecccccc-ccccchhhH
Q 022941 124 CFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN---GQWCIVVGFHPLVIC-EEHEEQLEA 199 (289)
Q Consensus 124 ~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~---~~~~iV~~HhP~~~~-~~~~~~~~~ 199 (289)
....... ....... ++.............+.+.++|++||++...... +...|++.|+++... ..... .
T Consensus 79 ~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~-~-- 151 (252)
T 1nnw_A 79 MSDPHAT-DPGYIDK---LELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVL-A-- 151 (252)
T ss_dssp HSCTTCS-SSGGGGG---SSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCC-S--
T ss_pred ccccccC-Ccccccc---hhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccC-C--
Confidence 1100000 0000000 0000000000000012456788999976322111 235899999988432 21100 0
Q ss_pred HhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCC
Q 022941 200 KKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLE 272 (289)
Q Consensus 200 ~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~ 272 (289)
....+.+..+++++ ++++++|||+|... ...+++.++.+|+.+.+..+ ....+|.++++++.++++..+..+
T Consensus 152 ~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~~~~~-~~~~~y~il~~~~~~v~~~~v~yd 225 (252)
T 1nnw_A 152 EQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGK-EHKATFALVDVDTLKPKFIEVEYD 225 (252)
T ss_dssp SCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSCSSS-SCCEEEEEEETTTCCEEEEEECCC
T ss_pred CCCHHHHHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccCCCCC-CCcceEEEEECCCCeEEEEEeCCC
Confidence 01124677888888 99999999999965 55678888888887654322 235789999998777777666543
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-15 Score=138.65 Aligned_cols=212 Identities=13% Similarity=0.011 Sum_probs=118.7
Q ss_pred CCccEEEEEEeCCCCCCh------hHH---HHHHHHHHHHhhCCccEEEEcCCCCCCC-h---hhhhhhccCCCC---CC
Q 022941 46 KGLDFYFISVTGGFRPLE------QQT---LLLKQMEDVAKSYDARFVINTSELGEDD-P---LKQNATWLFPSL---KV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~------~~~---~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~---~~~~~~~~~~~l---~~ 109 (289)
....+||++++|.|.|.. ... ...+.+.+.+...+||+||++||+.... + .+....+.+..+ ++
T Consensus 17 ~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~ 96 (386)
T 3av0_A 17 RGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNI 96 (386)
T ss_dssp -CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 456799999999887642 111 2233344445567999999999985432 2 222223344333 78
Q ss_pred CeEEecCCCcCCCCc----e---e---------EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhh
Q 022941 110 PWYTTKASKEKEVGC----F---Q---------EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEA 173 (289)
Q Consensus 110 P~~~v~GNHD~~~~~----~---~---------~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~ 173 (289)
|+++++||||..... . . +.+...+++++.+++++..... ......++++|+...+.
T Consensus 97 pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~~-------~~~~~~~~l~~l~~~~~- 168 (386)
T 3av0_A 97 KVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKS-------KREEMLDKLKNFESEAK- 168 (386)
T ss_dssp EEEECCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCST-------THHHHHHHHHHHHHHHH-
T ss_pred cEEEEcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCHH-------HHHHHHHHHHHhhhhcc-
Confidence 999999999943211 0 0 0011112244666666543210 00111234444444332
Q ss_pred cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcc---
Q 022941 174 TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGRE--- 249 (289)
Q Consensus 174 ~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~--- 249 (289)
...+.|+++|+|+...... .. .... . .+. ++|++++||.|... ...++..++.+|+......+..
T Consensus 169 -~~~~~Ill~H~~~~~~~~~-~~--~~~~-~----~l~--~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~~~~e~~~~ 237 (386)
T 3av0_A 169 -NYKKKILMLHQGINPYIPL-DY--ELEH-F----DLP--KFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDY 237 (386)
T ss_dssp -TCSSEEEEECCCCTTTSSS-SC--SSCG-G----GSC--CCSEEEECSCCSCEEEECSSSEEEECCCSSCCSGGGTHHH
T ss_pred -cCCCEEEEECcCccccCCC-Cc--ccCH-H----Hhh--hCCeEEccCCCCCccccCCCceEEECCcccccCcchhccc
Confidence 3468999999998542211 00 0000 0 122 39999999999964 3445566666676543321111
Q ss_pred --cCCcEEEEEEeC---cEEEEEEEcCCCcEE
Q 022941 250 --MVDGFLLHKVSS---LEILTYFVTLEGEVV 276 (289)
Q Consensus 250 --~~~gf~~v~v~~---~~i~~~~~~~~g~~~ 276 (289)
...||.++++++ +.++++++....+.+
T Consensus 238 ~~~~kg~~lv~i~~~~~~~~~v~~i~l~~r~~ 269 (386)
T 3av0_A 238 KKEGKGFYLVDFSGNDLDISDIEKIDIECREF 269 (386)
T ss_dssp HHHCSEEEEEECCSSSCCGGGEEEEECCCCCE
T ss_pred cCCCCEEEEEEEecCcCCCceEEEEECCccee
Confidence 468999999987 667778877755554
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.63 E-value=8.8e-15 Score=121.38 Aligned_cols=164 Identities=9% Similarity=-0.018 Sum_probs=99.7
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
.+.+|++++||.|. . ...+.+.+. ..+..++|+|+++||+... +..+.+.+++.|+++|+||||.....+.
T Consensus 23 ~g~m~i~~iSD~Hg-~--~~~l~~~l~-~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l~~~~~~V~GNhD~~~~~~~ 93 (190)
T 1s3l_A 23 QGHMKIGIMSDTHD-H--LPNIRKAIE-IFNDENVETVIHCGDFVSL-----FVIKEFENLNANIIATYGNNDGERCKLK 93 (190)
T ss_dssp ---CEEEEECCCTT-C--HHHHHHHHH-HHHHSCCSEEEECSCCCST-----HHHHHGGGCSSEEEEECCTTCCCHHHHH
T ss_pred cCCeEEEEEeeCCC-C--HHHHHHHHH-HHhhcCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEeCCCcchHHHHH
Confidence 34489999999873 2 223333333 3445789999999998642 2334444567899999999993221110
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
+ +..|.+-. .|+.....-.....+|++.|.|++. +
T Consensus 94 ~-~~~~~~~~----------------------------~l~~~~~~~~~~~~~ill~Hg~~~~----------------l 128 (190)
T 1s3l_A 94 E-WLKDINEE----------------------------NIIDDFISVEIDDLKFFITHGHHQS----------------V 128 (190)
T ss_dssp H-HHHHHCTT----------------------------CEEESEEEEEETTEEEEEEESCCHH----------------H
T ss_pred H-HhcccChh----------------------------hhcccceEEeeCCcEEEEECCChHH----------------H
Confidence 0 00000000 0000000001135789999998743 2
Q ss_pred HHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEE
Q 022941 207 HHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTY 267 (289)
Q Consensus 207 ~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~ 267 (289)
.+.+.+. +++++++||+|... ...+++.++.+|+.+. . ....++|.+++++++++++.
T Consensus 129 ~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r--~~~~~~y~il~~~~~~v~~~ 188 (190)
T 1s3l_A 129 LEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-Y--LTGIPTIGILDTEKKEYREI 188 (190)
T ss_dssp HHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-T--TTSCCEEEEEETTTTEEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-c--CCCCCEEEEEEcCCCcEEEE
Confidence 2345565 99999999999965 5567888888888765 3 22468999999988876654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-15 Score=131.40 Aligned_cols=196 Identities=9% Similarity=-0.037 Sum_probs=113.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
...|++++||.|.. ...+.+.+..+ . ++|.++++||+....+.-.+..+.+..++ +++.++||||.+......
T Consensus 2 ~~mri~~isDiHg~---~~~l~~~l~~~-~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~ 74 (246)
T 3rqz_A 2 NAMRILIISDVHAN---LVALEAVLSDA-G--RVDDIWSLGDIVGYGPRPRECVELVRVLA-PNISVIGNHDWACIGRLS 74 (246)
T ss_dssp CCCCEEEECCCTTC---HHHHHHHHHHH-C--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-SSEECCCHHHHHHTCCCC
T ss_pred CCcEEEEEeecCCC---HHHHHHHHHhc-c--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-CCEEEeCchHHHHhccCC
Confidence 34789999998742 22332333322 2 89999999998755443233333333333 269999999943221100
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccc-cccchhhHHhhHHHH
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICE-EHEEQLEAKKIYEPL 206 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~-~~~~~~~~~~~~~~l 206 (289)
. .. .+... .... ......+..++++||++...... ...+++.|.++.... ... . ....+
T Consensus 75 ~------~~-----~~~~~-~~~~-~~~~~~l~~~~~~~L~~lp~~~~-~~~i~~~Hg~p~~~~~~~~--~----~~~~~ 134 (246)
T 3rqz_A 75 L------DE-----FNPVA-RFAS-YWTTMQLQAEHLQYLESLPNRMI-DGDWTVVHGSPRHPIWEYI--Y----NARIA 134 (246)
T ss_dssp C------C-------CGGG-GCHH-HHHHHHCCHHHHHHHHHCCSEEE-ETTEEEESSCSSSTTTCCC--C----SHHHH
T ss_pred c------cc-----cCHHH-HHHH-HHHHHHcCHHHHHHHHhCCcEEE-ECCEEEEECCcCCcccccc--C----ChHHH
Confidence 0 00 00000 0000 00012456789999985322211 125888998876543 110 0 12456
Q ss_pred HHHHHHhCCeEEEeCCCccce-ec---------------------CCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEE
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SR---------------------QDSITYMENPGLIESGNGREMVDGFLLHKVSSLEI 264 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~---------------------~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i 264 (289)
.+++++++++++||||+|.+. .. ..+..++..||.+.+..| ....+|.+++.++.++
T Consensus 135 ~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prdg-~p~A~Y~i~d~~~~~v 213 (246)
T 3rqz_A 135 ALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDG-DPRASYAIFEPDAQRV 213 (246)
T ss_dssp HHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCSS-CCSEEEEEEEGGGTEE
T ss_pred HHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCCCCc-CCcceEEEEECCCCEE
Confidence 678889999999999999855 22 235667777887765422 3346899999988878
Q ss_pred EEEEEcC
Q 022941 265 LTYFVTL 271 (289)
Q Consensus 265 ~~~~~~~ 271 (289)
+++.+.-
T Consensus 214 ~~~rv~Y 220 (246)
T 3rqz_A 214 TFHRVEY 220 (246)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 7776643
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.3e-15 Score=128.11 Aligned_cols=209 Identities=7% Similarity=-0.088 Sum_probs=120.0
Q ss_pred CCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCce
Q 022941 46 KGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCF 125 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~ 125 (289)
.-...|++++||.|.. ..++.+.+.. ++..++|.|+++||+...++...+..+.+.+++ |+++|+||||.+....
T Consensus 8 ~~~~~~i~~iSDiHg~---~~~l~~vl~~-~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~ 82 (270)
T 3qfm_A 8 HMDMTKIALLSDIHGN---TTALEAVLAD-ARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDSLWHG 82 (270)
T ss_dssp ---CEEEEEECCCTTC---HHHHHHHHHH-HHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHHHHHH
T ss_pred cccccEEEEEecCCCC---HHHHHHHHHH-HHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHHHHHh
Confidence 4578999999998742 2333333333 344689999999998765443334444444443 7899999999321110
Q ss_pred e-EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhc--C-CCeEEEEeeccccccccccchhhHHh
Q 022941 126 Q-EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEAT--N-GQWCIVVGFHPLVICEEHEEQLEAKK 201 (289)
Q Consensus 126 ~-~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~--~-~~~~iV~~HhP~~~~~~~~~~~~~~~ 201 (289)
. ..+.+.. .....+-....+ ....+.+++++||++--... . ....|++.|.++...... ......
T Consensus 83 ~~~~~~~~~--~~~~~~~~~~~~-------~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~--~~~~~~ 151 (270)
T 3qfm_A 83 VRKELDSTR--PSQRYLLRQCQY-------VLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGR--ELIHTG 151 (270)
T ss_dssp HTTCSCTTS--HHHHHHHHHHHH-------HHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSS--TTSTTC
T ss_pred hccccCCCc--HHHHHHHHHHHH-------HHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCc--eecCCC
Confidence 0 0000000 000000000000 01246678899988532211 1 345788899776543211 001111
Q ss_pred hHHHHHHHHHHhCCeEEEeCCCccce-ec-CCCeEEEecCCCCCCCCCc-----ccCCcEEEEEEeCcE-EEEEEEc
Q 022941 202 IYEPLHHIFMKFGVNTYLSKHGCIKY-SR-QDSITYMENPGLIESGNGR-----EMVDGFLLHKVSSLE-ILTYFVT 270 (289)
Q Consensus 202 ~~~~l~~ll~~~~V~~vl~GH~H~~~-~~-~~gi~~i~~g~~~~~~~g~-----~~~~gf~~v~v~~~~-i~~~~~~ 270 (289)
..+.+..++++.+++++++||+|... .. .+++.++..|+.+.+..+. ....+|.++++++++ ++++++.
T Consensus 152 ~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 152 KQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp CHHHHHHTTTTTTCSEEECCSSCSEEEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEE
T ss_pred cHHHHHHHhcccCCCEEEECCcCchHheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEE
Confidence 23456677777899999999999865 44 4788899999988765432 236789999999875 4666653
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.55 E-value=3.5e-14 Score=130.02 Aligned_cols=221 Identities=10% Similarity=0.029 Sum_probs=122.2
Q ss_pred EEEEEEeCCCCCCh------------hHHHHHHHHHHHHhhCCccEEEEcCCCC-CCC-h---hhhhhhcc---CCCCCC
Q 022941 50 FYFISVTGGFRPLE------------QQTLLLKQMEDVAKSYDARFVINTSELG-EDD-P---LKQNATWL---FPSLKV 109 (289)
Q Consensus 50 ~~f~~~gD~~~g~~------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~-~~~-~---~~~~~~~~---~~~l~~ 109 (289)
+||++++|.|.|.. .+....+.+.+.+...+||+||++||+. ... + .++...+. +... +
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 48999999776653 1234445555556677999999999987 321 1 12222222 2333 8
Q ss_pred CeEEecCCCcCCCCce-----e----Ee---------EeCC--CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHH
Q 022941 110 PWYTTKASKEKEVGCF-----Q----EQ---------IRLP--HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKS 169 (289)
Q Consensus 110 P~~~v~GNHD~~~~~~-----~----~~---------~~~p--~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~ 169 (289)
|++.++|||| +.+.. . .. +.+. .+..+.++++...... ........++.+|+.+
T Consensus 80 ~v~~i~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~-----~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 80 PVVVLPGNQD-WKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES-----EALRKNEGDFRFFLES 153 (379)
T ss_dssp CEEECCCTTS-CTTHHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC---------CHHHHHHHHHHH
T ss_pred CEEEEcCCCc-cccCccccccccccCCcceeecccceEEEEcCCCCEEEEEECCCCCHH-----HHhhhhccchHHHHHH
Confidence 9999999999 44311 0 00 0111 1224555555322100 0011355678899999
Q ss_pred HHh----hc--CCCeEEEEeecccccccc-ccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 170 ALE----AT--NGQWCIVVGFHPLVICEE-HEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 170 ~L~----~~--~~~~~iV~~HhP~~~~~~-~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
.|+ +. +..+.|+++|.++..... ... . ......+...+...++|.+++||.|... ....+ ..+-+|+.
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~s--e-~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~~~~-~i~y~GS~ 229 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGI--E-QGREIIINRALIPSVVDYAALGHIHSFREIQKQP-LTIYPGSL 229 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC----------CSCCBCGGGSCTTSSEEEEESCSSCEEEEETT-EEEECCCS
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCC--c-cccccccCHHHcCcCCCEEEcccccCCeEeCCCC-cEEecCCC
Confidence 887 32 456889999999864332 100 0 0000011111224589999999999965 22212 23334543
Q ss_pred CCCCCC-cccCCcEEEEEEeCcE-EEEEEEcCCCcEEEEEEE
Q 022941 242 IESGNG-REMVDGFLLHKVSSLE-ILTYFVTLEGEVVYRTAT 281 (289)
Q Consensus 242 ~~~~~g-~~~~~gf~~v~v~~~~-i~~~~~~~~g~~~~~~~i 281 (289)
.....+ .....||.+|+++++. .+++++......+.+.+.
T Consensus 230 ~~~~f~E~~~~k~~~lv~~~~~~~~~v~~i~~~~r~~~~~~~ 271 (379)
T 3tho_B 230 IRIDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYY 271 (379)
T ss_dssp SCCSGGGSSSCCEEEEEECCSSSCCEEEEEECCCCCEEEEEC
T ss_pred CCCCcccccCCCEEEEEEEcCCCcceEEEeCCCCeeeEEEEc
Confidence 221111 2346899999998754 788888755555555554
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=9.7e-14 Score=122.15 Aligned_cols=183 Identities=10% Similarity=-0.037 Sum_probs=105.2
Q ss_pred CCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hhhhhhccCCCCC-CCeEEecCCCcCC
Q 022941 45 RKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LKQNATWLFPSLK-VPWYTTKASKEKE 121 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~-~P~~~v~GNHD~~ 121 (289)
...+.+||+++||.|..... + +-.++|+||++||+...+. +++...+.+.+++ .|+++|+||||.+
T Consensus 55 ~~~~~mri~~iSD~H~~~~~---l--------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG---I--------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELT 123 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT---C--------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGG
T ss_pred CCCCCeEEEEEeeCCCCcch---h--------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccc
Confidence 34677999999998764421 1 1257999999999976433 3333444555554 4689999999953
Q ss_pred CCc-eeE------------------------------eEeCCC----CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHH
Q 022941 122 VGC-FQE------------------------------QIRLPH----GEALDIIGVNTGSLQGKIPTALPSASGDLLLNW 166 (289)
Q Consensus 122 ~~~-~~~------------------------------~~~~p~----~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~W 166 (289)
.+. +.+ -..+-+ -++++|++..-+++... . ....++.++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~---~---~f~~~~~~~ 197 (296)
T 3rl5_A 124 FDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNG---W---GFNLPRGQS 197 (296)
T ss_dssp GCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--C---C---TTBCCTTHH
T ss_pred cchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCC---c---CCCcchHHH
Confidence 221 000 011111 13477776444332210 0 111111223
Q ss_pred HHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHH-HHhCCeEEEeCCCccce--ecCCCeEEEecCCCCC
Q 022941 167 LKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIF-MKFGVNTYLSKHGCIKY--SRQDSITYMENPGLIE 243 (289)
Q Consensus 167 L~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll-~~~~V~~vl~GH~H~~~--~~~~gi~~i~~g~~~~ 243 (289)
+.+.....+.+..|++.|.|++.............-.+.|.+.+ ++++.+++++||.|... ...+++.++..|+.+.
T Consensus 198 ~~~~~~~ip~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~ 277 (296)
T 3rl5_A 198 LLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTV 277 (296)
T ss_dssp HHHHHTTSCTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCT
T ss_pred HHHHHhhCCCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCc
Confidence 33333334455789999999987643210000001124566666 68899999999999954 4567788888777654
Q ss_pred C
Q 022941 244 S 244 (289)
Q Consensus 244 ~ 244 (289)
.
T Consensus 278 ~ 278 (296)
T 3rl5_A 278 S 278 (296)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-14 Score=120.22 Aligned_cols=153 Identities=8% Similarity=-0.043 Sum_probs=90.8
Q ss_pred EEEEEEeCCCCCChhHH---------HHHHHHHHHHhh--CCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCC
Q 022941 50 FYFISVTGGFRPLEQQT---------LLLKQMEDVAKS--YDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~---------~~~~~l~~~~~~--~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
.+++++||.|.+..... ...+.+.+..++ .++|+|+++||+....+.++...+.+.+++.|++.|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 47899999886653321 123333333333 4899999999986543333333444555667999999999
Q ss_pred cCCCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhh
Q 022941 119 EKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLE 198 (289)
Q Consensus 119 D~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~ 198 (289)
|.....+...| . .+ .+..||+ +. ...+|+++|+|++.......
T Consensus 82 D~~~~~~~~~~------------------~---------~l--~~~~~l~----~~-~~~~i~~~H~~~~~~~~~~~--- 124 (195)
T 1xm7_A 82 DKDKESLKEYF------------------D---------EI--YDFYKII----EH-KGKRILLSHYPAKDPITERY--- 124 (195)
T ss_dssp CCCHHHHTTTC------------------S---------EE--ESSEEEE----EE-TTEEEEEESSCSSCSSCCSC---
T ss_pred CCchhhhhhhh------------------h---------ch--hHHHHHH----hc-CCcEEEEEccCCcCCCcccc---
Confidence 93211110000 0 00 0112222 11 35789999999876543211
Q ss_pred HHhhHHHHHHHHHHhCCeEEEeCCCccce-ecC----C-CeEEEecCC
Q 022941 199 AKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQ----D-SITYMENPG 240 (289)
Q Consensus 199 ~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~----~-gi~~i~~g~ 240 (289)
....+.+.+++++++++++++||+|... ... + |+.|+..|+
T Consensus 125 -~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 125 -PDRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANV 171 (195)
T ss_dssp -HHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBG
T ss_pred -cchHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeE
Confidence 1224678888999999999999999955 322 3 677766544
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-13 Score=108.41 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=94.0
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCcee
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~ 126 (289)
++-.+++++||.|. ..+..++.+.+.++. .++|+|+++||+... +..+.+.++..|++.|+|||| ... +.
T Consensus 20 ~~mmri~~iSD~Hg-~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~-----~~~~~l~~~~~~v~~V~GNhD-~~~-~~ 89 (178)
T 2kkn_A 20 QGVKRFLLISDSHV-PVRMASLPDEILNSL--KEYDGVIGLGDYVDL-----DTVILLEKFSKEFYGVHGNMD-YPD-VK 89 (178)
T ss_dssp --CEEEEEECCCCB-TTTTCCCCHHHHHGG--GGCSEEEESSCBSCH-----HHHHHHHHHTSSEEECCCSSS-CGG-GG
T ss_pred CcceEEEEEecccC-CCCHHHHHHHHHHHh--cCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEECCCC-cHH-HH
Confidence 34489999999873 111112222333222 579999999998642 222333334579999999999 321 00
Q ss_pred EeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPL 206 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l 206 (289)
. .+|.. ..+ .-...+|++.|...... ...+.+
T Consensus 90 ~--~lp~~---~~~---------------------------------~~~g~~i~l~HG~~~~~----------~~~~~~ 121 (178)
T 2kkn_A 90 E--HLPFS---KVL---------------------------------LVEGVTIGMCHGWGAPW----------DLKDRL 121 (178)
T ss_dssp G--TSCSC---EEE---------------------------------EETTEEEEECCSCCCHH----------HHHHHH
T ss_pred h--hCCcc---eEE---------------------------------EECCEEEEEECCCCCCC----------CHHHHH
Confidence 0 01110 000 00235788888653210 111223
Q ss_pred HHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 207 HHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 207 ~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
.+.++ .+++++++||+|.+. ...+++.++..|+.+. .+|.++++++++++++++.
T Consensus 122 ~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~--------~sy~il~~~~~~~~~~~~~ 177 (178)
T 2kkn_A 122 LKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE--------GSYAVLELDGGEVRFELKT 177 (178)
T ss_dssp HHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT--------TEEEEEEEETTEEEEEEEE
T ss_pred HHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC--------CeEEEEEECCCEEEEEEEe
Confidence 33444 689999999999965 5557788887766532 8999999999999888764
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-12 Score=107.49 Aligned_cols=172 Identities=7% Similarity=0.012 Sum_probs=104.0
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh------hh--hhhhccCCCCCCCeEEecCCCcC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP------LK--QNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~------~~--~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
-.+++++||.|... ..+.+.++. .+..++|+|+++||+....+ .| ++..+.+.+++.|++.|+||||.
T Consensus 25 mmki~~iSD~H~~~---~~l~~~l~~-~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSL---PATERVLEL-FAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBH---HHHHHHHHH-HHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCH---HHHHHHHHH-HHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCch
Confidence 37999999987532 223333332 33357999999999864322 11 22334455666799999999993
Q ss_pred CCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHH
Q 022941 121 EVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 121 ~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
....+... .|...... |+ .-...+|+++|.+++....
T Consensus 101 ~~~~~~~~--~~~~~~~~---------------------------~~------~~~g~~i~l~Hg~~~~~~~-------- 137 (208)
T 1su1_A 101 EVDQMLLH--FPITAPWQ---------------------------QV------LLEKQRLFLTHGHLFGPEN-------- 137 (208)
T ss_dssp HHHHHHSS--SCCCCSEE---------------------------EE------ECSSCEEEEECSSSSBTTB--------
T ss_pred HHHHhhhh--ccccCceE---------------------------EE------EECCcEEEEECCCCCCcch--------
Confidence 22111000 11100000 00 0124579999998865321
Q ss_pred hhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEEEEE
Q 022941 201 KIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRT 279 (289)
Q Consensus 201 ~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~ 279 (289)
+. . + ...+++++||+|... ...+++.++..|+.+.+.. ....+|.+++. + .+++++.+|+.+.+.
T Consensus 138 -l~----~-~--~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~pr~--~~~~sy~il~~--~--~~~~~~~~~~~~~~~ 203 (208)
T 1su1_A 138 -LP----A-L--NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKG--GNPASYGMLDN--D--VLSVIALNDQSIIAQ 203 (208)
T ss_dssp -CC----C-C--CTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCT--TCCCEEEEEET--T--EEEEEETTTCCEEEE
T ss_pred -hh----h-h--cCCCEEEECCcccCccEEeCCEEEEECCCCcCCCC--CCCCEEEEEEC--C--eEEEEEeCCCEEEEE
Confidence 00 0 1 145999999999965 4557788888888765432 23578999884 3 566777889888888
Q ss_pred EE
Q 022941 280 AT 281 (289)
Q Consensus 280 ~i 281 (289)
++
T Consensus 204 ~~ 205 (208)
T 1su1_A 204 VA 205 (208)
T ss_dssp EE
T ss_pred ec
Confidence 76
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-11 Score=112.08 Aligned_cols=95 Identities=6% Similarity=-0.034 Sum_probs=60.1
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--e---cCCCeEEEecCCCCCCCCC--cc
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--S---RQDSITYMENPGLIESGNG--RE 249 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~---~~~gi~~i~~g~~~~~~~g--~~ 249 (289)
.+.|+++|......+... ... .-+...++|+++.||.|... . ..++...+-+|+.....-. ..
T Consensus 230 ~~~Ilv~H~~~~~~g~~~--~ip--------~~l~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~ 299 (431)
T 3t1i_A 230 WFNLFVIHQNRSKHGSTN--FIP--------EQFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEA 299 (431)
T ss_dssp EEEEEEECSCCSCSSSSS--SCC--------GGGSCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHH
T ss_pred ceEEEEECCCccCCCccc--cCC--------HhHhhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccC
Confidence 378999999874322210 001 11334579999999999954 2 1345666666665432111 13
Q ss_pred cCCcEEEEEEeCcEEEEEEEcCC-CcEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFVTLE-GEVVYRTAT 281 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~~~~-g~~~~~~~i 281 (289)
...||.+++++++.+.++.+..+ -+.+...++
T Consensus 300 ~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v 332 (431)
T 3t1i_A 300 VKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDI 332 (431)
T ss_dssp SCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred CCCEEEEEEEECCEEEEEEEECCCcceEEEEEE
Confidence 57899999999999999999876 344444444
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.1e-12 Score=115.69 Aligned_cols=88 Identities=7% Similarity=-0.037 Sum_probs=59.1
Q ss_pred CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e----cCCCeEEEecCCCCCCCCC--c
Q 022941 176 GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S----RQDSITYMENPGLIESGNG--R 248 (289)
Q Consensus 176 ~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~----~~~gi~~i~~g~~~~~~~g--~ 248 (289)
..+.|+++|++....+... .. . .-+...++|+++.||.|... . ..+++..+.+|+....... .
T Consensus 210 ~~~nIlvlH~~~~~~~~~~--yi-p-------~~l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E 279 (417)
T 4fbw_A 210 EWFNLLTVHQNHSAHTPTS--YL-P-------ESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGE 279 (417)
T ss_dssp TSEEEEEEESCSSCSSSSS--SC-C-------GGGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHH
T ss_pred CceEEEEecCCccCCCCcc--cC-c-------hhHhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCcccc
Confidence 3478999999876543210 00 1 11445689999999999955 2 2456666766665433211 2
Q ss_pred ccCCcEEEEEEeCcEEEEEEEcCCC
Q 022941 249 EMVDGFLLHKVSSLEILTYFVTLEG 273 (289)
Q Consensus 249 ~~~~gf~~v~v~~~~i~~~~~~~~g 273 (289)
....||.+++++++.+.++.+..+.
T Consensus 280 ~~~kg~~lvei~~~~~~~e~i~l~~ 304 (417)
T 4fbw_A 280 TAPKHCGILNITGKDFHLEKIRLRT 304 (417)
T ss_dssp HSCCEEEEEEEETTEEEEEEEECSS
T ss_pred CCCCEEEEEEEECCEEEEEEEECCC
Confidence 3589999999999999999988654
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=6.8e-12 Score=116.40 Aligned_cols=95 Identities=7% Similarity=-0.006 Sum_probs=61.7
Q ss_pred CeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-e----cCCCeEEEecCCCCCCC-C-Ccc
Q 022941 177 QWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-S----RQDSITYMENPGLIESG-N-GRE 249 (289)
Q Consensus 177 ~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~----~~~gi~~i~~g~~~~~~-~-g~~ 249 (289)
.+.|+++|.+....+... .... -+...++|+++.||.|... . ..+++..+-+|+..... . +..
T Consensus 274 ~~nIlvlH~~~~~~~~~~--yipe--------~ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~ 343 (472)
T 4fbk_A 274 WFNLLTVHQNHSAHTPTS--YLPE--------SFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGET 343 (472)
T ss_dssp EEEEEEEESCSCCSSTTS--SCCG--------GGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGC
T ss_pred ceEEEEecCCccCCCccc--cCCh--------hhhhcCCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCC
Confidence 378999999876543210 0001 1334589999999999954 2 23566666666653321 1 223
Q ss_pred cCCcEEEEEEeCcEEEEEEEcCCC-cEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFVTLEG-EVVYRTAT 281 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~~~~g-~~~~~~~i 281 (289)
...||.+++++++.+.++.+..+. ..+...+|
T Consensus 344 ~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i 376 (472)
T 4fbk_A 344 APKHCGILNITGKDFHLEKIRLRTVRPFIMKDI 376 (472)
T ss_dssp SCCEEEEEEEETTEEEEEEEECSSSCCEEEEEE
T ss_pred CCCEEEEEEEECCEEEEEEEECCCcccEEEEEE
Confidence 589999999999999999998654 44555554
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-12 Score=113.54 Aligned_cols=71 Identities=15% Similarity=0.249 Sum_probs=45.6
Q ss_pred EEEEEEeCCCCCChh---------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h---hhhhhhccC---CCCCCCeEE
Q 022941 50 FYFISVTGGFRPLEQ---------QTLLLKQMEDVAKSYDARFVINTSELGEDD-P---LKQNATWLF---PSLKVPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~---------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~---~~~~~~~~~---~~l~~P~~~ 113 (289)
+||++++|.|.|... +....+.+.+.+.+.+||+||++||+.... + .+....+.+ ...++|++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 489999998776421 112233344455668999999999985422 2 122222333 344789999
Q ss_pred ecCCCcC
Q 022941 114 TKASKEK 120 (289)
Q Consensus 114 v~GNHD~ 120 (289)
++||||.
T Consensus 81 v~GNHD~ 87 (333)
T 1ii7_A 81 IEGNHDR 87 (333)
T ss_dssp ECCTTTC
T ss_pred eCCcCCC
Confidence 9999994
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=99.00 E-value=2e-08 Score=95.30 Aligned_cols=177 Identities=8% Similarity=0.009 Sum_probs=88.0
Q ss_pred CCccEEEEEEeCCCCCChh-------HHHHHHHHHHH---HhhCCc-cEEEEcCCCCCCChhh-----hhhhccCCCCCC
Q 022941 46 KGLDFYFISVTGGFRPLEQ-------QTLLLKQMEDV---AKSYDA-RFVINTSELGEDDPLK-----QNATWLFPSLKV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~-------~~~~~~~l~~~---~~~~~p-dfvv~~GD~~~~~~~~-----~~~~~~~~~l~~ 109 (289)
....+++++++|.|..... -.+++..+.++ ....+| +++|.+||+....+.. +...+.+..++.
T Consensus 5 ~~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg~ 84 (516)
T 1hp1_A 5 KTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY 84 (516)
T ss_dssp CCEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC
T ss_pred CceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccCC
Confidence 4567999999996543211 12233333332 222245 7999999985433311 111233444554
Q ss_pred CeEEecCCCcCCCCc------------------eeE-----eEeCC------CCCeEEEEEEcCCCccCC-CCCCCCC--
Q 022941 110 PWYTTKASKEKEVGC------------------FQE-----QIRLP------HGEALDIIGVNTGSLQGK-IPTALPS-- 157 (289)
Q Consensus 110 P~~~v~GNHD~~~~~------------------~~~-----~~~~p------~~~~~~~i~lDt~~~~~~-~~~~~~~-- 157 (289)
. ++++||||+..+. ... .+.-| ++-.+-++++.+...... .+....+
T Consensus 85 d-~~~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~ 163 (516)
T 1hp1_A 85 D-AMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIE 163 (516)
T ss_dssp C-EEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEE
T ss_pred C-EEeeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcE
Confidence 3 7889999953321 000 00001 123466777765432110 0110011
Q ss_pred -CcHHHH-HHHHHHHHhhc-CCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce
Q 022941 158 -ASGDLL-LNWLKSALEAT-NGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY 227 (289)
Q Consensus 158 -~~~~~Q-l~WL~~~L~~~-~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~ 227 (289)
....+. .+|++ +|++. ..+.+|+++|.|.......+.. ......+...+...+||++|+||.|...
T Consensus 164 ~~d~~~~~~~~v~-~l~~~~~~d~iI~l~H~g~~~~~~~~~~---~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 164 FRKPADEAKLVIQ-ELQQTEKPDIIIAATHMGHYDNGEHGSN---APGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp ECCHHHHHHHHHH-HHHHHTCCSEEEEEEESCCCGGGCCTTS---CCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred EeCHHHHHHHHHH-HHHhcCCCCEEEEEecCCccCCCccccc---CchHHHHHHhCCCCceeEEECCCCCccc
Confidence 122233 34444 46543 5678999999998653322100 0001122223333459999999999843
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.80 E-value=8.2e-09 Score=87.02 Aligned_cols=183 Identities=9% Similarity=-0.019 Sum_probs=88.1
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeE
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQE 127 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~ 127 (289)
...+++++||.|. . ...+.+.+.++....++|.++++||+...++.-.+..+.+.. .|++.++||||...-+...
T Consensus 11 ~~~~i~visDiHg-~--~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~~~~~~~ 85 (221)
T 1g5b_A 11 KYRNIWVVGDLHG-C--YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQMMIDGLS 85 (221)
T ss_dssp GCSCEEEECCCTT-C--HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHHHHHHHS
T ss_pred CCceEEEEEcCCC-C--HHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHHHHhhhc
Confidence 3468999999773 2 233334444332224689999999987544322233333332 4899999999932111000
Q ss_pred eEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCeEEEEeecccccccc-ccchhhHHh--
Q 022941 128 QIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATN---GQWCIVVGFHPLVICEE-HEEQLEAKK-- 201 (289)
Q Consensus 128 ~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~---~~~~iV~~HhP~~~~~~-~~~~~~~~~-- 201 (289)
. ...... ...+...+...+ ......+.+++++||++.-.... ....|++.|-.+..... .+.......
T Consensus 86 ~---~~~~~~--~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~l 159 (221)
T 1g5b_A 86 E---RGNVNH--WLLNGGGWFFNL-DYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVI 159 (221)
T ss_dssp T---TCCCHH--HHTTTGGGGGGS-CHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHH
T ss_pred c---CCcHHH--HHHcCCCchhhc-CHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccc
Confidence 0 000000 000000000000 00001244566677753211110 23578889975322110 000000000
Q ss_pred -hHHHHHHHHH-----HhCCeEEEeCCCccce-ecCCCeEEEecCCC
Q 022941 202 -IYEPLHHIFM-----KFGVNTYLSKHGCIKY-SRQDSITYMENPGL 241 (289)
Q Consensus 202 -~~~~l~~ll~-----~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~ 241 (289)
.+..+...++ ..+++.+++||+|... ...+++.+|-+|+.
T Consensus 160 w~~~~~~~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~~in~Gs~ 206 (221)
T 1g5b_A 160 WNRERISNSQNGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAV 206 (221)
T ss_dssp HCCHHHHHHHTTCCCCCBTSSEEEECSSCCSSCEEETTEEECCCCHH
T ss_pred cCchhhhhhccccCCcccCCCEEEECCCCCccceeeCCEEEEECCCC
Confidence 1234444444 3578999999999965 55567777766654
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.77 E-value=4.9e-08 Score=93.41 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=87.0
Q ss_pred CCccEEEEEEeCCCCCC--h------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-----hhhhccCC
Q 022941 46 KGLDFYFISVTGGFRPL--E------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-----QNATWLFP 105 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~--~------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-----~~~~~~~~ 105 (289)
....+++++++|.|... . .-.+++..+.++.+ ..|| +++.+||+....+.. +...+.+.
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~-~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWA-RAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHH-HSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHh-hCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 35679999999955321 1 11345555554433 3566 899999986543321 11123345
Q ss_pred CCCCCeEEecCCCcCCCCc--e------------eEeEe----------C-C------CCCeEEEEEEcCCCccC-CCCC
Q 022941 106 SLKVPWYTTKASKEKEVGC--F------------QEQIR----------L-P------HGEALDIIGVNTGSLQG-KIPT 153 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~~--~------------~~~~~----------~-p------~~~~~~~i~lDt~~~~~-~~~~ 153 (289)
.++.. +.++||||+..+. + .+.+. . | ++..+-++++.+..... ..+.
T Consensus 105 ~lg~d-~~~lGNHEfd~g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~ 183 (552)
T 2z1a_A 105 RLRYR-AMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG 183 (552)
T ss_dssp HTTCC-EEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCC
T ss_pred hcCCC-ccccccccccCCHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccCCC
Confidence 55444 7889999954331 0 00000 0 1 12345666666542211 0010
Q ss_pred CCCC-CcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH-hCCeEEEeCCCccce
Q 022941 154 ALPS-ASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK-FGVNTYLSKHGCIKY 227 (289)
Q Consensus 154 ~~~~-~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~-~~V~~vl~GH~H~~~ 227 (289)
.... ....++++..-++|++...+.+|++.|.|.... . .+.++ .+||++|+||.|...
T Consensus 184 ~~~~~~d~~~~~~~~v~~l~~~~~d~iIvL~H~g~~~d---------~-------~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 184 PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGED---------L-------KLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH---------H-------HHHTTCSSCCEEEECSSCCCB
T ss_pred CCcEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcchH---------H-------HHHHhCCCccEEEeCCcCccc
Confidence 0000 122345554555676555678999999986220 0 12333 489999999999843
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.8e-07 Score=86.77 Aligned_cols=208 Identities=13% Similarity=0.094 Sum_probs=100.0
Q ss_pred CCCccEEEEEEeCCCCCCh-------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh----------hhh
Q 022941 45 RKGLDFYFISVTGGFRPLE-------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK----------QNA 100 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~-------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~----------~~~ 100 (289)
..+.++++++++|.|.... .-.+++..+.++.+ ..|+ ++|.+||+....+.. +..
T Consensus 15 ~~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~-~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 15 FQGSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRR-QYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp ---CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHT-TSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred cCCCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHh-cCCCEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 3467899999999553211 01244555555433 3555 788899986544321 122
Q ss_pred hccCCCCCCCeEEecCCCcCCCCc------------------eeE---eEe-CC------CCCeEEEEEEcCCCccCCC-
Q 022941 101 TWLFPSLKVPWYTTKASKEKEVGC------------------FQE---QIR-LP------HGEALDIIGVNTGSLQGKI- 151 (289)
Q Consensus 101 ~~~~~~l~~P~~~v~GNHD~~~~~------------------~~~---~~~-~p------~~~~~~~i~lDt~~~~~~~- 151 (289)
.+.+..++.. +.++||||+..|. ... .+. -| ++-.+-++++.+.......
T Consensus 94 ~~~ln~lg~D-~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~ 172 (527)
T 3qfk_A 94 VDFYNRMAFD-FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQ 172 (527)
T ss_dssp HHHHHHTCCC-EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSC
T ss_pred HHHHHhcCCc-EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccC
Confidence 2345555554 5679999954331 000 000 11 1234566777654321100
Q ss_pred C---CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHH--hCCeEEEeCCCccc
Q 022941 152 P---TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMK--FGVNTYLSKHGCIK 226 (289)
Q Consensus 152 ~---~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~--~~V~~vl~GH~H~~ 226 (289)
+ .+-.-....+.++-.-++|+ ...+.+|++.|.+.......+.........+....+.++ -+||++|+||.|..
T Consensus 173 ~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~ 251 (527)
T 3qfk_A 173 PEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQ 251 (527)
T ss_dssp HHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCE
T ss_pred ccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcc
Confidence 0 00000112222322223455 345788999997764321110000000000001123333 48999999999995
Q ss_pred e-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCc
Q 022941 227 Y-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSL 262 (289)
Q Consensus 227 ~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~ 262 (289)
. ...+++..+.+|+-+. .-|-..++++++
T Consensus 252 ~~~~v~~~~ivqag~~g~-------~lg~i~l~~~~~ 281 (527)
T 3qfk_A 252 IAERFKQTAVIQPGTRGT-------TVGRVVLSTDEY 281 (527)
T ss_dssp EEEEETTEEEEEECSTTS-------EEEEEEEEECSS
T ss_pred cceEECCEEEeccChhhC-------EEEEEEEEEECC
Confidence 5 4456777666655432 344455555544
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.59 E-value=1e-06 Score=84.27 Aligned_cols=160 Identities=13% Similarity=0.031 Sum_probs=83.0
Q ss_pred Ccc-EEEEcCCCCCCChh--h---hhhhccCCCCCCCeEEecCCCcCCCCc--e---eE--eE-------e---------
Q 022941 80 DAR-FVINTSELGEDDPL--K---QNATWLFPSLKVPWYTTKASKEKEVGC--F---QE--QI-------R--------- 130 (289)
Q Consensus 80 ~pd-fvv~~GD~~~~~~~--~---~~~~~~~~~l~~P~~~v~GNHD~~~~~--~---~~--~~-------~--------- 130 (289)
+|| ++|.+||+....+. + +...+.++.++.+++ + ||||+..+. + .+ .| .
T Consensus 122 gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~ 199 (562)
T 2wdc_A 122 GGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLF 199 (562)
T ss_dssp TCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSS
T ss_pred CCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCccc
Confidence 388 89999998654331 1 122244566677765 6 999953331 0 00 00 0
Q ss_pred CC------CCCeEEEEEEcCCCccCCCC----CCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHH
Q 022941 131 LP------HGEALDIIGVNTGSLQGKIP----TALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 131 ~p------~~~~~~~i~lDt~~~~~~~~----~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
-| ++..+-++++.+.......+ .+..-....+.++-.-++|++...+.+|++.|.|... + .
T Consensus 200 ~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~~--------d-~ 270 (562)
T 2wdc_A 200 PAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQL--------D-A 270 (562)
T ss_dssp CSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHHH--------H-H
T ss_pred CCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCcc--------h-H
Confidence 01 12346667775532110000 0000011223333333456654567899999998521 0 1
Q ss_pred hhHHHHHHHHHH-hCCeEEEeCCCccce---ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEE
Q 022941 201 KIYEPLHHIFMK-FGVNTYLSKHGCIKY---SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEI 264 (289)
Q Consensus 201 ~~~~~l~~ll~~-~~V~~vl~GH~H~~~---~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i 264 (289)
.+.++ .+||++|+||.|... ...+++..+.+|+-+ ..-|...++++++++
T Consensus 271 -------~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~~g-------~~lg~i~l~~~~g~v 324 (562)
T 2wdc_A 271 -------ALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAG-------KALMRVDLKLWKGGI 324 (562)
T ss_dssp -------HHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCSTT-------CEEEEEEEEEETTEE
T ss_pred -------HHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCccc-------cEEEEEEEEEeCCcE
Confidence 23333 389999999999843 223566555544432 245666666665543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=7.6e-07 Score=84.99 Aligned_cols=77 Identities=6% Similarity=0.126 Sum_probs=45.0
Q ss_pred CCCCccEEEEEEeCCCCCCh-----------------hHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhh
Q 022941 44 NRKGLDFYFISVTGGFRPLE-----------------QQTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNAT 101 (289)
Q Consensus 44 ~~~~~~~~f~~~gD~~~g~~-----------------~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~ 101 (289)
.+...++++++++|.|.... .-.+++..+.++.++.+.+++|.+||+....+.. +...
T Consensus 20 ~~~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 20 SPDPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp ---CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred CCCceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHH
Confidence 34567899999999553211 1245555565554444447999999986544321 1112
Q ss_pred ccCCCCCCCeEEecCCCcCC
Q 022941 102 WLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 102 ~~~~~l~~P~~~v~GNHD~~ 121 (289)
+.+..++.. +.++||||+.
T Consensus 100 ~~ln~lg~d-~~~~GNHEfd 118 (546)
T 4h2g_A 100 HFMNALRYD-AMALGNHEFD 118 (546)
T ss_dssp HHHHHHTCS-EEECCGGGGT
T ss_pred HHHHhcCCc-EEeccCcccc
Confidence 344555555 5789999953
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-05 Score=76.01 Aligned_cols=75 Identities=8% Similarity=-0.005 Sum_probs=41.3
Q ss_pred CccEEEEEEeCCCCCCh---------------hHHHHHHHHHHHHhhCCccEEEE-cCCCCCCChh-----hhhhhccCC
Q 022941 47 GLDFYFISVTGGFRPLE---------------QQTLLLKQMEDVAKSYDARFVIN-TSELGEDDPL-----KQNATWLFP 105 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~---------------~~~~~~~~l~~~~~~~~pdfvv~-~GD~~~~~~~-----~~~~~~~~~ 105 (289)
..++++++++|.|.... .-.+++..+.++. +..|+.+++ +||+...... .+...+.+.
T Consensus 4 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r-~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 4 AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEK-AKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMN 82 (509)
T ss_dssp CEEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHH-HHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHT
T ss_pred ceEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHH-hcCCCeEEEECCCCCCCchhhhhcCChHHHHHHH
Confidence 35799999999552111 0233444444433 346776555 9997543221 111223455
Q ss_pred CCCCCeEEecCCCcCCCC
Q 022941 106 SLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~ 123 (289)
.++.. ++++||||+..|
T Consensus 83 ~lg~D-~~tlGNHEfd~G 99 (509)
T 3ive_A 83 TMPFD-AVTIGNHEFDHG 99 (509)
T ss_dssp TSCCS-EECCCGGGGTTC
T ss_pred hcCCc-EEeecccccccC
Confidence 55544 677899995433
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=7.7e-06 Score=78.55 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=43.8
Q ss_pred CCCccEEEEEEeCCCCCChh------------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-----hhhh
Q 022941 45 RKGLDFYFISVTGGFRPLEQ------------------QTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-----QNAT 101 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~------------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-----~~~~ 101 (289)
+.+-++++++++|.|..... -.+++..+.++.++....++|..||+......+ +...
T Consensus 8 ~~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~ 87 (579)
T 3ztv_A 8 HKAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADA 87 (579)
T ss_dssp CCCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHH
T ss_pred CCceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHH
Confidence 34567999999995532111 234555555544443344999999986543211 1112
Q ss_pred ccCCCCCCCeEEecCCCcCC
Q 022941 102 WLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 102 ~~~~~l~~P~~~v~GNHD~~ 121 (289)
+.+..++.. ++++||||+.
T Consensus 88 ~~ln~lg~D-~~tlGNHEfd 106 (579)
T 3ztv_A 88 AVMNAGNFH-YFTLGNHEFD 106 (579)
T ss_dssp HHHHHHTCS-EEECCSGGGT
T ss_pred HHHHhcCcC-eeeccccccc
Confidence 334444444 5789999953
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0002 Score=68.25 Aligned_cols=78 Identities=15% Similarity=0.127 Sum_probs=45.9
Q ss_pred CCCccEEEEEEeCCCCCCh-------------hHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-------hhhhcc
Q 022941 45 RKGLDFYFISVTGGFRPLE-------------QQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-------QNATWL 103 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~-------------~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-------~~~~~~ 103 (289)
.....+++++++|.|.... .-.+++..+.+..++.+|+ ++|.+||.....+.. +...+.
T Consensus 11 ~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ 90 (557)
T 3c9f_A 11 LTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPI 90 (557)
T ss_dssp CCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred CCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHH
Confidence 3467899999999443210 1234444555444346788 579999975433311 112244
Q ss_pred CCCCCCCeEEecCCCcCCCC
Q 022941 104 FPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 104 ~~~l~~P~~~v~GNHD~~~~ 123 (289)
+..++.. +.++||||+..|
T Consensus 91 ln~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 91 FIKQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp HTTSCCS-EECCCGGGSSSH
T ss_pred HHhcCCC-EEeecchhcccc
Confidence 5666655 568899995443
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.01 E-value=5.7e-05 Score=65.63 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=42.5
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-hhhhhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-PLKQNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~~~~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.++++++||.+ |...-..++..+.++.++.++|+++..||....+ .......+.+..+++- ..++|||++..+
T Consensus 4 ~m~ilf~GDv~-G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-a~TlGNHefD~g 77 (281)
T 1t71_A 4 SIKFIFLGDVY-GKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHTWFQK 77 (281)
T ss_dssp CCEEEEECEEB-HHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTCCG
T ss_pred eEEEEEECCcC-ChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCC-EEEEccCcccCC
Confidence 57999999943 2223344555555554444689999999964322 1112223334344433 467799996555
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00027 Score=63.27 Aligned_cols=54 Identities=13% Similarity=0.185 Sum_probs=31.1
Q ss_pred HHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce
Q 022941 168 KSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY 227 (289)
Q Consensus 168 ~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~ 227 (289)
-++|++...+.+|+++|-......... .... ....+.++. +||++|.||.|...
T Consensus 200 v~~Lk~~g~D~II~l~H~G~~~d~~~~---~~e~---~~~~lA~~v~giD~IigGHsH~~~ 254 (341)
T 3gve_A 200 IPKMKAEGADVIIALAHTGIEKQAQSS---GAEN---AVFDLATKTKGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHHHTTCSEEEEEECCCCCSSCCCT---TCSS---CHHHHHHHCSCCCEEEECSSCCEE
T ss_pred HHHHHhcCCCEEEEEeccCcccccccc---ccch---hHHHHHhcCCCCcEEEECCCCccC
Confidence 345665456789999998764322110 0000 011233333 89999999999853
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00035 Score=59.86 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=38.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCC-hhhhhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDD-PLKQNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~~~~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.|++++||.- |......+...+.++.++. |+++..|+....+ ......++.+..+++- ..+.|||++..+
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~--d~vi~nge~~~~G~g~~~~~~~~l~~~G~D-a~TlGNHefD~~ 71 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF--DFVIVNMENSAGGFGMHRDAARGALEAGAG-CLTLGNHAWHHK 71 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC--SEEEEECTBTTTTSSCCHHHHHHHHHHTCS-EEECCTTTTSST
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC--CEEEECCCCccCCcCCCHHHHHHHHhCCCC-EEEeccccccCc
Confidence 3789999932 3333345555555554443 9999888854322 1112223334344444 356699995443
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00042 Score=59.15 Aligned_cols=70 Identities=10% Similarity=0.048 Sum_probs=38.9
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhh-hhhhccCCCCCCCeEEecCCCcCCCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLK-QNATWLFPSLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~-~~~~~~~~~l~~P~~~v~GNHD~~~~ 123 (289)
.|++++||. .|......+...+.++.++. |+++..|.....+.-+ +..++.+..+++-. .+.|||++..+
T Consensus 1 m~ilfiGDi-~g~~G~~~v~~~l~~lr~~~--d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~-~T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDV-MAEPGLRAVGLHLPDIRDRY--DLVIANGENAARGKGLDRRSYRLLREAGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHGGGC--SEEEEECTTTTTTSSCCHHHHHHHHHHTCCE-EECCTTTTSCT
T ss_pred CEEEEEEec-CCcccHHHHHHHHHHHHhhC--CEEEEeCCCccCCCCcCHHHHHHHHhCCCCE-EEeccEeeECc
Confidence 378999992 22233445666666654444 8888777753222211 22233344445554 47799995444
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00035 Score=62.52 Aligned_cols=76 Identities=9% Similarity=0.094 Sum_probs=42.2
Q ss_pred CCccEEEEEEeCCCCCChh-------------HHHHHHHHHHHHhhCCccEEEEcCCCCCCChh--hh-----------h
Q 022941 46 KGLDFYFISVTGGFRPLEQ-------------QTLLLKQMEDVAKSYDARFVINTSELGEDDPL--KQ-----------N 99 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~g~~~-------------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~--~~-----------~ 99 (289)
..-.++++..+|.|....+ -.+++..+.++-++.+..++|..||.....+. |. .
T Consensus 5 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p 84 (339)
T 3jyf_A 5 ATVDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHP 84 (339)
T ss_dssp CEEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCH
T ss_pred cceeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchH
Confidence 3467999999995432110 13445555544333333488999998654332 11 1
Q ss_pred hhccCCCCCCCeEEecCCCcCCC
Q 022941 100 ATWLFPSLKVPWYTTKASKEKEV 122 (289)
Q Consensus 100 ~~~~~~~l~~P~~~v~GNHD~~~ 122 (289)
..+.+..++.- +.++||||+..
T Consensus 85 ~~~~mn~lg~D-~~t~GNHEfd~ 106 (339)
T 3jyf_A 85 VYKAMNTLNYA-VGNLGNHEFNY 106 (339)
T ss_dssp HHHHHTTSCCS-EEECCGGGGTT
T ss_pred HHHHHHhcCCC-EEecchhhhhc
Confidence 12334555544 46789999543
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00041 Score=65.79 Aligned_cols=50 Identities=22% Similarity=0.165 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccc
Q 022941 161 DLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIK 226 (289)
Q Consensus 161 ~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~ 226 (289)
.+..+..-++|++...+-+|++.|--.. .+ . .+.++. +||+++.||.|..
T Consensus 172 v~~~~~~v~~Lr~~g~D~II~LsH~G~~--------~d-~-------~la~~v~giD~IlgGHsH~~ 222 (530)
T 4h1s_A 172 ITALQPEVDKLKTLNVNKIIALGHSGFE--------MD-K-------LIAQKVRGVDVVVGGHSNTF 222 (530)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEESCHH--------HH-H-------HHHHHSTTCCEEECCSSCCC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeccCCch--------HH-H-------HHHhcCCCCCeeccCCccce
Confidence 3344444556776566789999996431 01 1 233444 7999999999984
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.54 E-value=2.8e-05 Score=67.82 Aligned_cols=66 Identities=11% Similarity=-0.038 Sum_probs=40.6
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
+++++||.|. . ...+.+.+.++....++|.++++||+...++.-.+..+.+..++.+++.++||||
T Consensus 2 ~i~vigDiHG-~--~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe 67 (280)
T 2dfj_A 2 ATYLIGDVHG-C--YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHD 67 (280)
T ss_dssp CEEEECCCCS-C--HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHH
T ss_pred eEEEEecCCC-C--HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCc
Confidence 5789999774 2 2233333333222246899999999865544222333333334448999999999
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.36 E-value=6.9e-05 Score=64.61 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=39.5
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCc-cEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDA-RFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~p-dfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
.-+++++||.| |.. ..+.+.+.. ....++ |.+|++||+...++.-.+..+.+. ..+++.++||||.
T Consensus 18 ~~~i~visDiH-g~~--~~l~~~l~~-~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~--~~~~~~v~GNHd~ 84 (262)
T 2qjc_A 18 TGRVIIVGDIH-GCR--AQLEDLLRA-VSFKQGSDTLVAVGDLVNKGPDSFGVVRLLK--RLGAYSVLGNHDA 84 (262)
T ss_dssp CSCEEEECCCT-TCH--HHHHHHHHH-HTCCTTTSEEEECSCCSSSSSCHHHHHHHHH--HHTCEECCCHHHH
T ss_pred CCeEEEEeCCC-CCH--HHHHHHHHH-HhccCCCCEEEEecCCCCCCCCHHHHHHHHH--HCCCEEEeCcChH
Confidence 34899999977 332 233333333 333344 999999998654432122222222 2378999999993
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0012 Score=59.12 Aligned_cols=70 Identities=7% Similarity=0.004 Sum_probs=40.5
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhh-------CCccEEEEcCCCCCCChhhhhhhccCC-------CCCCCeE
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKS-------YDARFVINTSELGEDDPLKQNATWLFP-------SLKVPWY 112 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~-------~~pdfvv~~GD~~~~~~~~~~~~~~~~-------~l~~P~~ 112 (289)
+...+++++||.|. .. .++.+.+...... .++|.+|++||+...++.-.+..+.+. ..+.+++
T Consensus 68 ~~~~~i~vigDiHG-~~--~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHG-QY--DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTT-CH--HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCC-CH--HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEE
Confidence 45678999999773 22 2333333321100 147999999998654432122222211 2245789
Q ss_pred EecCCCc
Q 022941 113 TTKASKE 119 (289)
Q Consensus 113 ~v~GNHD 119 (289)
.+.||||
T Consensus 145 ~v~GNHE 151 (342)
T 2z72_A 145 LLMGNHE 151 (342)
T ss_dssp ECCCHHH
T ss_pred EEecCCc
Confidence 9999999
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.003 Score=55.65 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=39.9
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+..-+++++||.|. .-.++.+.+.........+.++++||....++.-.+..+.+.. .+-.++.+.||||
T Consensus 57 p~~~ri~viGDIHG---~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE 130 (315)
T 3h63_A 57 KETEKITVCGDTHG---QFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHE 130 (315)
T ss_dssp CTTCEEEEECCCTT---CHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CCCceEEEEecCCC---CHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcc
Confidence 44578999999764 2233444443322112335699999987655422222222111 1345899999999
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0025 Score=59.37 Aligned_cols=70 Identities=7% Similarity=-0.074 Sum_probs=40.2
Q ss_pred CccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 47 GLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+...+++++||.|. . -.++.+.+.........+-+|++||....++.-.+....+.. .+.+++.++||||
T Consensus 210 ~~~~~~~vigDiHG-~--~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE 283 (477)
T 1wao_1 210 KETEKITVCGDTHG-Q--FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHE 283 (477)
T ss_dssp CSSCEEEEECBCTT-C--HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CCCcceEEEeCCCC-C--HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCcc
Confidence 34578999999764 1 233333333322112235699999987655422222222111 2457899999999
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0024 Score=56.27 Aligned_cols=67 Identities=4% Similarity=-0.095 Sum_probs=39.0
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCcC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKEK 120 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD~ 120 (289)
-+++++||.|. . -.++.+.+.. ....+++.++++||....++.-.+..+.+.. .+-.++.+.||||.
T Consensus 50 ~~i~viGDIHG-~--~~~L~~ll~~-~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~ 120 (309)
T 2ie4_C 50 CPVTVCGDVHG-Q--FHDLMELFRI-GGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 120 (309)
T ss_dssp SSEEEECCCTT-C--HHHHHHHHHH-HCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred CCEEEEecCCC-C--HHHHHHHHHH-cCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCH
Confidence 35899999763 2 2233333332 3334567789999987655422222222211 13358999999994
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0048 Score=54.84 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=39.6
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
..-+++++||.|. .-.++.+.+........-+.+|++||....++.-.+....+. ..+-.++.+.||||
T Consensus 62 ~~~ri~viGDIHG---~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE 134 (335)
T 3icf_A 62 PDVKISVCGDTHG---QFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHE 134 (335)
T ss_dssp TTCEEEEECCCTT---CHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cCceEEEEecCCC---CHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchh
Confidence 6678999999764 223344444332111122469999998765542222222211 11345899999999
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0045 Score=54.95 Aligned_cols=66 Identities=8% Similarity=-0.053 Sum_probs=38.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD~ 120 (289)
++.++||.|. . -.++.+.+.. ......+-+|++||+...++.-.+..+.+.. .+-.++.+.||||.
T Consensus 58 ~i~viGDIHG-~--~~~L~~ll~~-~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~ 127 (330)
T 1fjm_A 58 PLKICGDIHG-Q--YYDLLRLFEY-GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127 (330)
T ss_dssp SEEEECBCTT-C--HHHHHHHHHH-HCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSS
T ss_pred ceEEecCCCC-C--HHHHHHHHHH-hCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchH
Confidence 4889999764 2 2333333433 2223457799999987655422222222211 13458999999993
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.012 Score=51.48 Aligned_cols=65 Identities=9% Similarity=-0.023 Sum_probs=37.7
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
+++++||.|. .-.++.+.+.. ....+.+-+|++||....++.-.+..+.+. ..+-.++.+.||||
T Consensus 57 ~i~viGDIHG---~~~~L~~ll~~-~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE 125 (299)
T 3e7a_A 57 PLKICGDIHG---QYYDLLRLFEY-GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (299)
T ss_dssp SEEEECBCTT---CHHHHHHHHHH-HCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CEEEEecCCC---CHHHHHHHHHH-hCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCch
Confidence 4889999764 22334343433 233455779999998665442222222111 12345899999999
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.013 Score=54.79 Aligned_cols=65 Identities=9% Similarity=-0.032 Sum_probs=37.9
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCC----CCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPS----LKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~----l~~P~~~v~GNHD 119 (289)
+++++||.|. . -.++.+.+. .......+-+|++||....++.-.+....+.. .+-.++.+.||||
T Consensus 84 pI~VIGDIHG-q--~~dL~~LL~-~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE 152 (521)
T 1aui_A 84 PVTVCGDIHG-Q--FFDLMKLFE-VGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHE 152 (521)
T ss_dssp SEEEECCCTT-C--HHHHHHHHH-HHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceeeccCCCC-C--HHHHHHHHH-hcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCcc
Confidence 4889999764 1 233333333 33234468899999987655422222222111 1335899999999
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.79 E-value=0.018 Score=51.41 Aligned_cols=65 Identities=9% Similarity=-0.041 Sum_probs=38.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCC----CCCCCeEEecCCCc
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFP----SLKVPWYTTKASKE 119 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~----~l~~P~~~v~GNHD 119 (289)
+++++||.|.- -.++.+.+. .......+-++++||....++.-.+....+. ..+-.++.+.||||
T Consensus 71 pi~ViGDIHG~---~~dL~~ll~-~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE 139 (357)
T 3ll8_A 71 PVTVCGDIHGQ---FFDLMKLFE-VGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHE 139 (357)
T ss_dssp SEEEECCCTTC---HHHHHHHHH-HHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cceeeccCCCC---HHHHHHHHH-hcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchh
Confidence 48899996641 233333333 2333456889999998765542222222111 11335899999999
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.27 E-value=1.1 Score=41.46 Aligned_cols=73 Identities=18% Similarity=0.075 Sum_probs=41.6
Q ss_pred CccEEEEEEeCCCCCChh-H-HHHHHHHHHHHh-----------hCCccEEEEcCCCCCC-C--h------hh--h----
Q 022941 47 GLDFYFISVTGGFRPLEQ-Q-TLLLKQMEDVAK-----------SYDARFVINTSELGED-D--P------LK--Q---- 98 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~~-~-~~~~~~l~~~~~-----------~~~pdfvv~~GD~~~~-~--~------~~--~---- 98 (289)
..+..+++++|-+.|... . ..-.+.+.++.. ..+..-+|+.||.... + . .+ +
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 466789999996666532 1 222333333332 2468899999996211 0 0 00 0
Q ss_pred ---hhhc----cCCCC--CCCeEEecCCCc
Q 022941 99 ---NATW----LFPSL--KVPWYTTKASKE 119 (289)
Q Consensus 99 ---~~~~----~~~~l--~~P~~~v~GNHD 119 (289)
+.++ .+.++ .+|+..+|||||
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~D 307 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFD 307 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTS
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCC
Confidence 0111 12333 789999999999
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 289 | ||||
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 2e-08 |
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 52.1 bits (123), Expect = 2e-08
Identities = 43/296 (14%), Positives = 83/296 (28%), Gaps = 66/296 (22%)
Query: 47 GLDFYFISVTGGFRP----LEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATW 102
L F + GG ++ K + K+ A F+++ + +
Sbjct: 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 63
Query: 103 LF-----------PSLKVPWYTTKASKEKEVGC--------FQEQIRLPH---------- 133
F VPW+ + + ++ P
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 123
Query: 134 --GEALDIIGVNTGSLQGKIPTALPS--------ASGDLLLNWLKSALEATNGQWCIVVG 183
++ I ++T +L G + A L W+K L A + +V G
Sbjct: 124 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAG 183
Query: 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKH--------------------G 223
+P+ EH K PL V YL H G
Sbjct: 184 HYPVWSIAEHGPTHCLVKQLLPLLT---THKVTAYLCGHDHNLQYLQDENGLGFVLSGAG 240
Query: 224 CIKYSRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRT 279
+ + + N L + GF +++ E+ ++ G+ +++T
Sbjct: 241 NFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKT 296
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.96 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.95 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.93 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.85 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.84 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.66 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.65 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.54 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.46 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.45 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.34 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 99.24 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.89 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.65 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.37 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.73 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.33 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 92.28 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 91.36 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 90.04 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 85.91 |
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=4.9e-35 Score=256.64 Aligned_cols=233 Identities=18% Similarity=0.279 Sum_probs=172.8
Q ss_pred ccEEEEEEeCCCCC------ChhHHHHHHHHHHHHhhCCccEEEEcCCCCC-------CChhhhhhhc-cC---CCCCCC
Q 022941 48 LDFYFISVTGGFRP------LEQQTLLLKQMEDVAKSYDARFVINTSELGE-------DDPLKQNATW-LF---PSLKVP 110 (289)
Q Consensus 48 ~~~~f~~~gD~~~g------~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~-------~~~~~~~~~~-~~---~~l~~P 110 (289)
..+||+++||.+.+ ...+...++.|.+.+++.+|||||++||+.. .+.+|++.++ .+ ...++|
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 57999999994332 1234455566777777889999999999742 2335555443 22 234899
Q ss_pred eEEecCCCcCCCCce--------------------eEeEeCCC-CCeEEEEEEcCCCccCCC-------CCCCC-CCcHH
Q 022941 111 WYTTKASKEKEVGCF--------------------QEQIRLPH-GEALDIIGVNTGSLQGKI-------PTALP-SASGD 161 (289)
Q Consensus 111 ~~~v~GNHD~~~~~~--------------------~~~~~~p~-~~~~~~i~lDt~~~~~~~-------~~~~~-~~~~~ 161 (289)
+|+++|||| +.++. ...+..+. .+.++|+++|+..+.... ..... ....+
T Consensus 83 ~~~~~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T d1utea_ 83 WHVLAGNHD-HLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR 161 (302)
T ss_dssp EEECCCHHH-HHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHH
T ss_pred eEEeecccc-cccccccccchhhccccccCCCcccceeecccCCCCcEEEEEccceeEeecccccccccccccccchhHH
Confidence 999999999 33221 11223332 568999999986543211 11111 24678
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce--ecCCCeEEEecC
Q 022941 162 LLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY--SRQDSITYMENP 239 (289)
Q Consensus 162 ~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~--~~~~gi~~i~~g 239 (289)
+|++||+++|++++++|+||++|||+++...++ .....+..+.++|++++|+++||||+|.+. ...+++.|+++|
T Consensus 162 ~Q~~WL~~~L~~~~~~~~iv~~h~~~~~~~~~~---~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~~~~~~~i~~g 238 (302)
T d1utea_ 162 TQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHG---PTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSG 238 (302)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSC---CCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHHhhccCceEEEEeccccccCCCC---CchhhhhhhhHHHHhcCceEEEeCCCcceEEEecCCccEEEEeC
Confidence 999999999999999999999999999887652 334567889999999999999999999965 556789999998
Q ss_pred CCCCCCCC------------------cccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEEEecC
Q 022941 240 GLIESGNG------------------REMVDGFLLHKVSSLEILTYFVTLEGEVVYRTATRER 284 (289)
Q Consensus 240 ~~~~~~~g------------------~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~i~~~ 284 (289)
+++..... .....||.+++|+++++++++++.+|+++++++|.+|
T Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~~~~l~~~~~~~~G~~~~~~~~~~~ 301 (302)
T d1utea_ 239 AGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRR 301 (302)
T ss_dssp BSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCEEEEEEECCC
T ss_pred CCCCCCCCccccccCCCcccceeecccCCcceEEEEEEECCEEEEEEEeCCCCEEEEEEecCC
Confidence 87654210 2346799999999999999999999999999999887
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=2.4e-34 Score=255.56 Aligned_cols=227 Identities=17% Similarity=0.169 Sum_probs=158.7
Q ss_pred CCCccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCC-------ChhhhhhhccCCC--CCCCeEEec
Q 022941 45 RKGLDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGED-------DPLKQNATWLFPS--LKVPWYTTK 115 (289)
Q Consensus 45 ~~~~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~-------~~~~~~~~~~~~~--l~~P~~~v~ 115 (289)
..+.++||+++||.+........+... .....+|||||++||+... ..+|..+++.+.. ..+|+++++
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~---~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~ 79 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHY---ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTA 79 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHH---HHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECC
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHH---HHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEec
Confidence 346789999999943322222222221 2345789999999998531 2355555544432 268999999
Q ss_pred CCCcCCCC-------c---eeEeEeCCC--------------CCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHH
Q 022941 116 ASKEKEVG-------C---FQEQIRLPH--------------GEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSAL 171 (289)
Q Consensus 116 GNHD~~~~-------~---~~~~~~~p~--------------~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L 171 (289)
||||.... . +..+|.+|. .++++||+||+.... ....+|++||+++|
T Consensus 80 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~---------~~~~~Q~~WL~~~L 150 (312)
T d2qfra2 80 GNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAY---------GRGTPQYTWLKKEL 150 (312)
T ss_dssp CGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCC---------STTSHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccc---------cchHHHHHHHHHHH
Confidence 99993111 0 122344442 367899999986422 23458999999999
Q ss_pred hhcC---CCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceec-------------------
Q 022941 172 EATN---GQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSR------------------- 229 (289)
Q Consensus 172 ~~~~---~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~------------------- 229 (289)
++.+ .+|+||++|||+|+.+... ......+++.|.++|++++||++||||+|.|++.
T Consensus 151 ~~~~~~~~~w~iv~~H~P~y~~~~~~-~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~ 229 (312)
T d2qfra2 151 RKVKRSETPWLIVLMHSPLYNSYNHH-FMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVK 229 (312)
T ss_dssp HTCCTTTCCEEEEECSSCSSCCBSTT-TTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEE
T ss_pred HHHhhcCCCEEEEEccccccccCCCC-cccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCcccccc
Confidence 9753 3599999999999887642 1233557889999999999999999999997621
Q ss_pred -CCCeEEEecCCCCCC------CCC--------cccCCcEEEEEEe-CcEEEEEEEc-CCCcEE--EEEEEecC
Q 022941 230 -QDSITYMENPGLIES------GNG--------REMVDGFLLHKVS-SLEILTYFVT-LEGEVV--YRTATRER 284 (289)
Q Consensus 230 -~~gi~~i~~g~~~~~------~~g--------~~~~~gf~~v~v~-~~~i~~~~~~-~~g~~~--~~~~i~~~ 284 (289)
..|+.||++|+++.. +.. +...+||.++++. ...+.++++. .+|+++ |++.|.|+
T Consensus 230 ~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~ 303 (312)
T d2qfra2 230 DQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNR 303 (312)
T ss_dssp CTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECT
T ss_pred CCCcCEEEEECcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeC
Confidence 136789999887632 000 3457899999995 4569999884 789887 99999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=1.3e-29 Score=218.34 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=144.8
Q ss_pred CccEEEEEEeCCCCCCh---------hHHHHHHHHHHHHh-hCCccEEEEcCCCCCCCh--hhhhhhccC----CCCCCC
Q 022941 47 GLDFYFISVTGGFRPLE---------QQTLLLKQMEDVAK-SYDARFVINTSELGEDDP--LKQNATWLF----PSLKVP 110 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g~~---------~~~~~~~~l~~~~~-~~~pdfvv~~GD~~~~~~--~~~~~~~~~----~~l~~P 110 (289)
++.+||++++|.|.+.. ....+.+.++.+.+ ..+|||||++||+...+. +|+.+.+.+ ..+++|
T Consensus 2 ~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 2 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp CCSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhhcCCC
Confidence 46899999999764321 12334444555543 358999999999975432 333333322 456899
Q ss_pred eEEecCCCcCCCCceeEeE------eCC-----CCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeE
Q 022941 111 WYTTKASKEKEVGCFQEQI------RLP-----HGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWC 179 (289)
Q Consensus 111 ~~~v~GNHD~~~~~~~~~~------~~p-----~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~ 179 (289)
++.++|||| ....+.+.+ ..+ ..++++|+++||..... ..+...++|++||+++|++.+.+++
T Consensus 82 ~~~v~GNHD-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~-----~~g~~~~~~~~wl~~~L~~~~~~~~ 155 (256)
T d2hy1a1 82 LVWVMGNHD-DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGH-----HHGEIRASQLGWLAEELATPAPDGT 155 (256)
T ss_dssp EEECCCTTS-CHHHHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTC-----SSBCCCHHHHHHHHHHHTSCCTTCE
T ss_pred EEEEccccc-chhhhhhhhccccccccccceEEEecccceeeeeeeecCC-----cCCcccHHHHHHHHHHHHhhhccCc
Confidence 999999999 332211110 000 12568899999875331 2245778999999999998887889
Q ss_pred EEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCC-----CC----cc
Q 022941 180 IVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESG-----NG----RE 249 (289)
Q Consensus 180 iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~-----~g----~~ 249 (289)
||++|||++...............+.+..++++++|+++||||.|... ...+|++++++|+.+..+ .+ ..
T Consensus 156 iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~~~gi~~~~~~s~~~~~~~~~~~~~~~~~~ 235 (256)
T d2hy1a1 156 ILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRD 235 (256)
T ss_dssp EEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCCC----------------
T ss_pred eeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceEECCEEEEEcCCccccccccCCCCCccccc
Confidence 999999998765431111111235678899999999999999999855 667899999998875431 11 35
Q ss_pred cCCcEEEEEEeCcEEEEEEE
Q 022941 250 MVDGFLLHKVSSLEILTYFV 269 (289)
Q Consensus 250 ~~~gf~~v~v~~~~i~~~~~ 269 (289)
...||.++++++|.+..+.+
T Consensus 236 ~~~g~~lv~v~~d~~~~~~i 255 (256)
T d2hy1a1 236 GAQGCNLVHVYPDTVVHSVI 255 (256)
T ss_dssp ---CEEEEEECSSCEEEEEE
T ss_pred CCCCEEEEEEECCCEEEEeC
Confidence 67899999999999887764
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.95 E-value=5.4e-28 Score=210.02 Aligned_cols=213 Identities=12% Similarity=0.101 Sum_probs=147.9
Q ss_pred EEEEEeCCCCCCh---------hHHHHHHHHHHHHh-hCCccEEEEcCCCCCCCh--hhhhhhccCCCCCCCeEEecCCC
Q 022941 51 YFISVTGGFRPLE---------QQTLLLKQMEDVAK-SYDARFVINTSELGEDDP--LKQNATWLFPSLKVPWYTTKASK 118 (289)
Q Consensus 51 ~f~~~gD~~~g~~---------~~~~~~~~l~~~~~-~~~pdfvv~~GD~~~~~~--~~~~~~~~~~~l~~P~~~v~GNH 118 (289)
+|++++|.|.+.. ....+.+.++.+.. ..+||+||++||+...+. +|+...+.++++++|++.+||||
T Consensus 2 ~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~~~~y~~~~~~l~~l~~p~~~i~GNH 81 (271)
T d3d03a1 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNH 81 (271)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTT
T ss_pred EEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCcchhHHHHHHHHhccCCCEEEEecCc
Confidence 7899999775321 22334444444432 358999999999975432 45545566788899999999999
Q ss_pred cCCCCceeEeE---------------eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEe
Q 022941 119 EKEVGCFQEQI---------------RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVG 183 (289)
Q Consensus 119 D~~~~~~~~~~---------------~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~ 183 (289)
| ....+.+.+ .....++++++++||.... ...+.+.++|++||+++|++.+.+++||++
T Consensus 82 D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~-----~~~~~l~~~ql~wL~~~L~~~~~~~~iv~~ 155 (271)
T d3d03a1 82 D-DKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAG-----TSKGWLTDETISWLEAQLFEGGDKPATIFM 155 (271)
T ss_dssp S-CHHHHHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTT-----CSSBCCCHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred c-chHHHHHHhhhhhhccccccCcceEEEecCCeEEEecccccCC-----CCcceecHHHHHHHHHHHhhhccceeEEEe
Confidence 9 432211100 0012356889999997532 223467899999999999998878999999
Q ss_pred eccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCC----C-C----cccCC
Q 022941 184 FHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESG----N-G----REMVD 252 (289)
Q Consensus 184 HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~----~-g----~~~~~ 252 (289)
|||++..+............++|.++|+++ +|+++||||.|... ...+|++++++++++.+. . + ...++
T Consensus 156 Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pst~~~~~~~~~~~~~~~~~~p~ 235 (271)
T d3d03a1 156 HHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPA 235 (271)
T ss_dssp SSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCC
T ss_pred ccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceEECCEEEEEcCCceeecccCCCCCCcccccCCC
Confidence 999987665321111122356899999998 69999999999955 677899999998877652 1 1 23577
Q ss_pred cEEEEEEeCcEEEEEEE
Q 022941 253 GFLLHKVSSLEILTYFV 269 (289)
Q Consensus 253 gf~~v~v~~~~i~~~~~ 269 (289)
||.+..+.++++.....
T Consensus 236 ~~~~~~~~~~~~~~~~~ 252 (271)
T d3d03a1 236 SCLMHRQVGEQWVSYQH 252 (271)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeCCCEEEEEE
Confidence 99998888877655544
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.93 E-value=6.2e-25 Score=191.07 Aligned_cols=216 Identities=10% Similarity=0.048 Sum_probs=143.7
Q ss_pred cEEEEEEeCCCCCCh---------------h-HHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--------hhhhhhccC
Q 022941 49 DFYFISVTGGFRPLE---------------Q-QTLLLKQMEDVAKSYDARFVINTSELGEDDP--------LKQNATWLF 104 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~---------------~-~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--------~~~~~~~~~ 104 (289)
-|||++++|.|.+.. . ...+.+++. .+++.+|||||++||+..... .|+...+.+
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~-~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVL-QWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 81 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHH-HHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHH-HHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHH
Confidence 499999999775421 1 122333333 345689999999999864321 122223445
Q ss_pred CCCCCCeEEecCCCcCCCCc--------e--e---------EeEeCC-------CCCeEEEEEEcCCCccCCCC------
Q 022941 105 PSLKVPWYTTKASKEKEVGC--------F--Q---------EQIRLP-------HGEALDIIGVNTGSLQGKIP------ 152 (289)
Q Consensus 105 ~~l~~P~~~v~GNHD~~~~~--------~--~---------~~~~~p-------~~~~~~~i~lDt~~~~~~~~------ 152 (289)
..+++|++.++||||.+... . . ..+..+ ..++++++.+|+........
T Consensus 82 ~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (320)
T d2nxfa1 82 DACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161 (320)
T ss_dssp HTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHH
T ss_pred HHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccccc
Confidence 67899999999999932110 0 0 000000 12457788888764321000
Q ss_pred -------------------------------CCCCCCcHHHHHHHHHHHHhhcC--CCeEEEEeeccccccccccchhhH
Q 022941 153 -------------------------------TALPSASGDLLLNWLKSALEATN--GQWCIVVGFHPLVICEEHEEQLEA 199 (289)
Q Consensus 153 -------------------------------~~~~~~~~~~Ql~WL~~~L~~~~--~~~~iV~~HhP~~~~~~~~~~~~~ 199 (289)
......++.+|++||+++|++++ .+++||++|||+....... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~~viv~~H~p~~~~~~~~--~~~ 239 (320)
T d2nxfa1 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADP--ICL 239 (320)
T ss_dssp HHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCG--GGS
T ss_pred cccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcCCceEEEECCCCccCCCCC--ccc
Confidence 00112567999999999998653 4689999999998765531 111
Q ss_pred HhhHHHHHHHHHHh-CCeEEEeCCCccce--ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 200 KKIYEPLHHIFMKF-GVNTYLSKHGCIKY--SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 200 ~~~~~~l~~ll~~~-~V~~vl~GH~H~~~--~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
....+++.++|.++ +|+++|+||.|... ...+|++|++.|+.... .....+|.+++|.+|++.++.+.
T Consensus 240 ~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~~~g~~~i~~~~~~~~---~~~~~~~~~~~v~~d~~~~~~~~ 310 (320)
T d2nxfa1 240 AWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET---PPHSHAFATAYLYEDRMVMKGRG 310 (320)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC---CTTSCEEEEEEECSSEEEEEEEE
T ss_pred hhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeeccCCCEEEECCeeecC---CCCCCCEEEEEEECCEEEEEEec
Confidence 22356789999999 59999999999843 56789999998875432 34678999999999999999875
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.85 E-value=2.5e-21 Score=164.10 Aligned_cols=209 Identities=6% Similarity=0.013 Sum_probs=129.1
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh---hhhhh-------------------------
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP---LKQNA------------------------- 100 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~---~~~~~------------------------- 100 (289)
+.|+++++|.|... +..+.+...+++.+||+||++||+..... .++..
T Consensus 2 ~~ri~~isD~h~~~----~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~ 77 (257)
T d2yvta1 2 PRKVLAIKNFKERF----DLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDK 77 (257)
T ss_dssp CCEEEEEECCTTCG----GGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCH----HHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHH
Confidence 67999999977422 33344444555679999999999865321 11111
Q ss_pred -hccCCCCCCCeEEecCCCcCCCCce----------e-EeE-----eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHH
Q 022941 101 -TWLFPSLKVPWYTTKASKEKEVGCF----------Q-EQI-----RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLL 163 (289)
Q Consensus 101 -~~~~~~l~~P~~~v~GNHD~~~~~~----------~-~~~-----~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Q 163 (289)
++.+.++++|+|.+|||||...... . ... .....+.+.++++++................+.+
T Consensus 78 ~~~~L~~~~~pv~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T d2yvta1 78 FFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWY 157 (257)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHH
T ss_pred HHHHHHhcCCcEEEEeCCCcchhhHHHHHhccccccccccccccceeEEecCCeEEEEeccccCCccccchhhhhhhhhH
Confidence 1123456899999999999321000 0 000 0111344666666554322111101112344556
Q ss_pred HHHHHHHHhhcCCCeEEEEeeccccccccccc-hhhHHhhHHHHHHHHHHhCCeEEEeCCCccceecCCCeEEEecCCCC
Q 022941 164 LNWLKSALEATNGQWCIVVGFHPLVICEEHEE-QLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLI 242 (289)
Q Consensus 164 l~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~-~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~~~gi~~i~~g~~~ 242 (289)
..|++..+++.+..++|+++|+|++....... ..........+.++++++++++++|||.|......++..++.+|+.
T Consensus 158 ~~~~~~~~~~~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~~g~~~~~~pGs~- 236 (257)
T d2yvta1 158 VEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHELVGNTIVVNPGEF- 236 (257)
T ss_dssp HHHHGGGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEEETTEEEEECCBG-
T ss_pred HHHHHHHhhhcccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeEecCCeEEEECCcc-
Confidence 66777777777777899999999976543211 0111122456888999999999999999985544466667766544
Q ss_pred CCCCCcccCCcEEEEEEeCcEEEEEEE
Q 022941 243 ESGNGREMVDGFLLHKVSSLEILTYFV 269 (289)
Q Consensus 243 ~~~~g~~~~~gf~~v~v~~~~i~~~~~ 269 (289)
...+|.++++.+.+++++.+
T Consensus 237 -------~~g~y~~id~~~~~i~~~~~ 256 (257)
T d2yvta1 237 -------EEGRYAFLDLTQHKIKLEQF 256 (257)
T ss_dssp -------GGTEEEEEETTTTEEEEEEC
T ss_pred -------ccCEEEEEEEeCCEEEEEEC
Confidence 23689999999999998865
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.84 E-value=7.3e-21 Score=158.65 Aligned_cols=200 Identities=9% Similarity=-0.056 Sum_probs=128.1
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh---hhhhhhccCCCCCCCeEEecCCCcCCCCce--
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP---LKQNATWLFPSLKVPWYTTKASKEKEVGCF-- 125 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~---~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~-- 125 (289)
+++++||.|.. -+++ +++.+.+.+.++|+||++||+..... ++....+.+.++++|+++++||||......
T Consensus 7 ~i~~~sd~hg~---~eal-e~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~~~ 82 (228)
T d1uf3a_ 7 YILATSNPMGD---LEAL-EKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82 (228)
T ss_dssp EEEEEECCTTC---HHHH-HHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHHH
T ss_pred EEEEEeCCCCC---HHHH-HHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccccceEEEEecCCCchhhhhhh
Confidence 45689997652 2223 33333445568999999999975433 333334556778999999999999321110
Q ss_pred --------eE--eE----eCCCCCeEEEEEEcCCCccCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecccccc
Q 022941 126 --------QE--QI----RLPHGEALDIIGVNTGSLQGK-IPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVIC 190 (289)
Q Consensus 126 --------~~--~~----~~p~~~~~~~i~lDt~~~~~~-~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~ 190 (289)
.. .. .....+.+.++.+++...... ............++.|+++.++.....+.|+++|+|++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~il~~H~p~~~~ 162 (228)
T d1uf3a_ 83 EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHK 162 (228)
T ss_dssp HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCSCCEEEEESSCBCBT
T ss_pred hhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhccCCceEEEEeeeccCc
Confidence 00 00 011234577777766543321 1111123567889999999998877778999999999765
Q ss_pred ccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccceecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEE
Q 022941 191 EEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKYSRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYF 268 (289)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~ 268 (289)
... ......+.++++++++++++|||+|......++..++.+|+. ....|+++++.+.++++.-
T Consensus 163 ~~~------~~~~~~~~~~~~~~~~~lvl~GH~H~~~~~~g~~~~v~pG~~--------~~g~y~~i~~~~~~ie~~~ 226 (228)
T d1uf3a_ 163 GLN------EQGSHEVAHLIKTHNPLLVLVAGKGQKHEMLGASWVVVPGDL--------SEGEYSLLDLRARKLETGN 226 (228)
T ss_dssp TTB------TTSBHHHHHHHHHHCCSEEEECCSSCEEEEETTEEEEECCBG--------GGTEEEEEETTTTEEEEEE
T ss_pred ccc------ccccHHHHHHHHhcCCcEEEEcccccchhccCCEEEEECCcc--------ccceEEEEEccCCEEEEEe
Confidence 432 011235677899999999999999985433344444444443 2356999999999887753
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.66 E-value=1.1e-15 Score=125.24 Aligned_cols=180 Identities=9% Similarity=0.123 Sum_probs=111.0
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeE--
Q 022941 52 FISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQI-- 129 (289)
Q Consensus 52 f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~-- 129 (289)
++++||.|.+.... .+..++.++.+..++|.|+++||+... +..+.+.++..|+++|+||||.........+
T Consensus 6 IlviSD~H~~~~~~-~l~~~~~~~~~~~~vD~ii~~GDi~~~-----~~l~~l~~l~~~v~~V~GN~D~~~~~~~~~~~~ 79 (193)
T d2a22a1 6 VLLIGDLKIPYGAK-ELPSNFRELLATDKINYVLCTGNVCSQ-----EYVEMLKNITKNVYIVSGDLDSAIFNPDPESNG 79 (193)
T ss_dssp EEEECCCCTTTTCS-SCCGGGHHHHHCTTCCEEEECSCCCCH-----HHHHHHHHHCSCEEECCCTTCCSCCBCCGGGTB
T ss_pred EEEEeCCCCCcccc-hhhHHHHHHhccCCCCEEEECCCCCCH-----HHHHHHHhhCCCEEEEcCCCCcchhhhhHHHHh
Confidence 57899987532111 111223334445689999999998642 2234444455678999999993221110000
Q ss_pred eCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHH
Q 022941 130 RLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHI 209 (289)
Q Consensus 130 ~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~l 209 (289)
.+|. ...+ .-..+.|.+.|.+.+..... .+.+..+
T Consensus 80 ~lp~---~~~~---------------------------------~~~~~~i~l~H~~~~~~~~~---------~~~l~~~ 114 (193)
T d2a22a1 80 VFPE---YVVV---------------------------------QIGEFKIGLMHGNQVLPWDD---------PGSLEQW 114 (193)
T ss_dssp CCCS---EEEE---------------------------------EETTEEEEEECSTTSSSTTC---------HHHHHHH
T ss_pred hCCc---cEEE---------------------------------EECCEEEEEEeccCCCCCCC---------HHHHHHH
Confidence 0010 0000 01245777777654332211 2345567
Q ss_pred HHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC--cccCCcEEEEEEeCcEEEEEEEcCC-CcE-EEEEEEe
Q 022941 210 FMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG--REMVDGFLLHKVSSLEILTYFVTLE-GEV-VYRTATR 282 (289)
Q Consensus 210 l~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g--~~~~~gf~~v~v~~~~i~~~~~~~~-g~~-~~~~~i~ 282 (289)
+++.++|++++||+|.+. ...+++.++..|+.+.++.+ ....++|++++++++++++++|+.. |++ ++..+.+
T Consensus 115 ~~~~~~dvvi~GHTH~~~~~~~~g~~~iNPGSvg~pr~~~~~~~~~syaild~~~~~v~v~~y~l~~~~~~~~~~~~~ 192 (193)
T d2a22a1 115 QRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFS 192 (193)
T ss_dssp HHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred HhhcCCCEEEEcCccCceEEEECCEEEEECCCCCcCcCCCCCCCCCEEEEEEEECCEEEEEEEEecCCeEEEEEEEEe
Confidence 788899999999999976 66788988888887765432 3456799999999999999999954 433 4444443
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.65 E-value=1.3e-15 Score=123.49 Aligned_cols=175 Identities=16% Similarity=0.201 Sum_probs=114.1
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEe
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIR 130 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~ 130 (289)
+++++||.|.+.... .+.+.+.++.+..++|.|+++||+.. .+..+.++.+..|+++|.||||....
T Consensus 2 kI~viSD~H~~~~~~-~l~~~~~~~~~~~~~D~Ii~~GDi~~-----~e~l~~l~~~~~~v~~V~GN~D~~~~------- 68 (182)
T d1z2wa1 2 LVLVLGDLHIPHRCN-SLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTLAGDVHIVRGDFDENLN------- 68 (182)
T ss_dssp EEEEECCCCBTTTCS-SCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHHCSEEEECCCTTCCCTT-------
T ss_pred EEEEEeecCCCCcch-hhHHHHHHHhcccCCCEEEEccCccc-----hhhHHHHHhhCCceEEEeCCcCcccc-------
Confidence 789999987533211 11122333344557999999999864 12334455556689999999993221
Q ss_pred CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHH
Q 022941 131 LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIF 210 (289)
Q Consensus 131 ~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll 210 (289)
.|. ...+-+ ...+|.+.|.+.+..... .+.+...+
T Consensus 69 ~p~---~~~~~~---------------------------------~g~~i~~~Hg~~~~~~~~---------~~~l~~~~ 103 (182)
T d1z2wa1 69 YPE---QKVVTV---------------------------------GQFKIGLIHGHQVIPWGD---------MASLALLQ 103 (182)
T ss_dssp SCS---EEEEEE---------------------------------TTEEEEEECSCCCCBTTC---------HHHHHHHH
T ss_pred cce---EEEEEE---------------------------------cCcEEEEEeCCCCCCCCC---------HHHHHHHH
Confidence 111 011110 134677777765543321 23455667
Q ss_pred HHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCC--cccCCcEEEEEEeCcEEEEEEEcCCC-cE-EEEEEEec
Q 022941 211 MKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNG--REMVDGFLLHKVSSLEILTYFVTLEG-EV-VYRTATRE 283 (289)
Q Consensus 211 ~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g--~~~~~gf~~v~v~~~~i~~~~~~~~g-~~-~~~~~i~~ 283 (289)
+..++|++++||+|.+. ...+++.++..|+.+.++.+ ....++|.+++++++++++..|+.++ ++ +++++.+|
T Consensus 104 ~~~~~divi~GHTH~p~~~~~~~~~~iNPGSv~~pr~~~~~~~~~syaild~~~~~v~~~~~~l~~~~v~~~~~~~~~ 181 (182)
T d1z2wa1 104 RQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181 (182)
T ss_dssp HHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred hccCCCEEEECCcCcceEEEECCEEEEeCCCCCCCCCCCCCCCCCEEEEEEEeCCEEEEEEEEecCCcEEEEEEEEEc
Confidence 78899999999999976 66688999988888776544 34567899999999999999999644 44 55556555
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.54 E-value=7.1e-13 Score=106.23 Aligned_cols=161 Identities=10% Similarity=-0.000 Sum_probs=106.9
Q ss_pred cEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEe
Q 022941 49 DFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQ 128 (289)
Q Consensus 49 ~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~ 128 (289)
..|++++||.|. +..++.+.+.+. ..++|.|+++||...... . . ...|++.|.|||| +...+
T Consensus 3 ~~kI~viSD~Hg---n~~al~~vl~~~--~~~~D~iih~GD~~~~~~-~----~----~~~~~~~V~GN~D-~~~~~--- 64 (173)
T d3ck2a1 3 KQTIIVMSDSHG---DSLIVEEVRDRY--VGKVDAVFHNGDSELRPD-S----P----LWEGIRVVKGNMD-FYAGY--- 64 (173)
T ss_dssp CEEEEEECCCTT---CHHHHHHHHHHH--TTTSSEEEECSCCCSCTT-C----G----GGTTEEECCCTTC-CSTTC---
T ss_pred CCEEEEEeccCC---CHHHHHHHHHHh--hcCCCEEEECCcccCccc-c----h----hhcCCeEEecCcc-ccccc---
Confidence 468999999885 233333334332 246999999999754321 1 1 1237889999999 32211
Q ss_pred EeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 129 IRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 129 ~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
|. ...+- -....+.+.|..++..... .+.+..
T Consensus 65 ---~~---~~~~~---------------------------------~~~~~~~~~Hg~~~~~~~~---------~~~l~~ 96 (173)
T d3ck2a1 65 ---PE---RLVTE---------------------------------LGSTKIIQTHGHLFDINFN---------FQKLDY 96 (173)
T ss_dssp ---CS---EEEEE---------------------------------ETTEEEEEECSGGGTTTTC---------SHHHHH
T ss_pred ---ce---EEEEE---------------------------------ECCEEEEEEeCcCCCCCCC---------HHHHHH
Confidence 11 00110 1235677777665544321 123556
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEE
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVV 276 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~ 276 (289)
.+.+.++|++++||+|.+. ...+++.++..|+.+.+.. ......|.+++++++++++++++.+++++
T Consensus 97 ~~~~~~~dvvi~GHTH~p~~~~~~~~~~iNPGSvg~pr~-~~~~~syail~~~~~~~~v~~~~~d~~~~ 164 (173)
T d3ck2a1 97 WAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRG-TIRECLYARVEIDDSYFKVDFLTRDHEVY 164 (173)
T ss_dssp HHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCT-TCCSCCEEEEEECSSEEEEEEECTTSCBC
T ss_pred HHHhcCCCEEEeCCcCcceEEEECCEEEEECCCCCCCCC-CCCCCEEEEEEEeCCEEEEEEEEeCCeEe
Confidence 6778899999999999976 6678999999999876532 23457899999999999999999888654
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.46 E-value=1.5e-12 Score=103.39 Aligned_cols=160 Identities=8% Similarity=-0.009 Sum_probs=97.7
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeE
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQI 129 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~ 129 (289)
.|++++||.|. +-.++.+.++ ..+..+||.|+++||+.... ..+.+..+..|++.+.||||..........
T Consensus 1 MkI~iiSDiHg---n~~al~~vl~-~~~~~~~D~ii~~GD~~~~~-----~~~~l~~~~~~~~~v~GN~D~~~~~~~~~~ 71 (165)
T d1s3la_ 1 MKIGIMSDTHD---HLPNIRKAIE-IFNDENVETVIHCGDFVSLF-----VIKEFENLNANIIATYGNNDGERCKLKEWL 71 (165)
T ss_dssp CEEEEECCCTT---CHHHHHHHHH-HHHHSCCSEEEECSCCCSTH-----HHHHGGGCSSEEEEECCTTCCCHHHHHHHH
T ss_pred CEEEEEEeCCC---CHHHHHHHHH-HHHhcCCCEEEECCCccCHH-----HHHHHhhcCccEEEEcccccccchhhhHhh
Confidence 37899999885 2233333333 34567999999999987432 123444557799999999992211100000
Q ss_pred e-CCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHH
Q 022941 130 R-LPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHH 208 (289)
Q Consensus 130 ~-~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ 208 (289)
. ....... ... ..-.-....|++.|-|++. .+..
T Consensus 72 ~~~~~~~~~-----~~~-------------------------~~~~~~~~~i~l~Hg~~~~---------------~~~~ 106 (165)
T d1s3la_ 72 KDINEENII-----DDF-------------------------ISVEIDDLKFFITHGHHQS---------------VLEM 106 (165)
T ss_dssp HHHCTTCEE-----ESE-------------------------EEEEETTEEEEEEESCCHH---------------HHHH
T ss_pred hhhcccccC-----Chh-------------------------hceEECCcEEEEEECCccc---------------HHHH
Confidence 0 0000000 000 0000123578889976432 1234
Q ss_pred HHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEE
Q 022941 209 IFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILT 266 (289)
Q Consensus 209 ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~ 266 (289)
+++..++|++++||+|.+. ...+++.++..|+.+.+. ...+.|.++++++++++.
T Consensus 107 ~~~~~~~d~v~~GHtH~~~~~~~~~~~~iNPGSvg~p~---~~~~s~~ild~~~~~~~~ 162 (165)
T d1s3la_ 107 AIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCGYL---TGIPTIGILDTEKKEYRE 162 (165)
T ss_dssp HHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSCTT---TSCCEEEEEETTTTEEEE
T ss_pred HhhcCCCCEEEECCcCcceEEEECCEEEEECCCCCCCC---CCCCEEEEEEccCCeEEE
Confidence 5677799999999999976 667889999988887653 235689999998876653
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.45 E-value=9.9e-14 Score=116.51 Aligned_cols=211 Identities=12% Similarity=-0.008 Sum_probs=112.5
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHH-hhCCccEEEEcCCCCCCChhhhhhhccCCCC--CCCeEEecCCCcCCCCcee
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVA-KSYDARFVINTSELGEDDPLKQNATWLFPSL--KVPWYTTKASKEKEVGCFQ 126 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~-~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l--~~P~~~v~GNHD~~~~~~~ 126 (289)
++++++||.|.....-+++.+.+.... ...++|.+|++||+...++.-.+..+.+.++ +.++++++||||.+....
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~~~v~~v~GNHD~~~~~~- 79 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIAMS- 79 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHHHHS-
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCcHHHHHHHHHHhhcCCEEEEeccHHHHHHhc-
Confidence 578999998742223344444443322 2356799999999976554334444444333 347899999999321110
Q ss_pred EeEeCCCCCeEEEEEEcCCCccC---CCCCCCCCCcHHHHHHHHHHHHhhc---CCCeEEEEeeccccccccccchhhHH
Q 022941 127 EQIRLPHGEALDIIGVNTGSLQG---KIPTALPSASGDLLLNWLKSALEAT---NGQWCIVVGFHPLVICEEHEEQLEAK 200 (289)
Q Consensus 127 ~~~~~p~~~~~~~i~lDt~~~~~---~~~~~~~~~~~~~Ql~WL~~~L~~~---~~~~~iV~~HhP~~~~~~~~~~~~~~ 200 (289)
.+..... ...+...... ............+++.||++..... .....+++.|+++........ ...
T Consensus 80 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~--~~~ 151 (251)
T d1nnwa_ 80 ----DPHATDP--GYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEV--LAE 151 (251)
T ss_dssp ----CTTCSSS--GGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCC--CSS
T ss_pred ----ccccccc--chhhhhccchhHHHhhHHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCccCcccchh--hhh
Confidence 0000000 0000000000 0000000123345566665322211 123578899988765433210 000
Q ss_pred hhHHHHHHHHHHh-CCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEc
Q 022941 201 KIYEPLHHIFMKF-GVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVT 270 (289)
Q Consensus 201 ~~~~~l~~ll~~~-~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~ 270 (289)
.........+... ++++++|||.|... ...++..++.+|+.+.+..| .....|.++++++.++++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~~~~~~~in~Gsvg~~~~g-~~~~~y~i~d~~~~~~~~~~~~ 222 (251)
T d1nnwa_ 152 QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGK-EHKATFALVDVDTLKPKFIEVE 222 (251)
T ss_dssp CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSCSSS-SCCEEEEEEETTTCCEEEEEEC
T ss_pred hHHHHHhhhcccccCceEEEEeccceEEEEEeeeeeccccccccccCCC-CCCCeEEEEEcCCCeEEEEEEC
Confidence 1112223334444 68999999999966 66788889998988765322 2345799999887777776544
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.34 E-value=1.6e-12 Score=113.16 Aligned_cols=71 Identities=14% Similarity=0.216 Sum_probs=45.1
Q ss_pred EEEEEEeCCCCCChh---------HHHHHHHHHHHHhhCCccEEEEcCCCCCCC-h---hhhhhhc---cCCCCCCCeEE
Q 022941 50 FYFISVTGGFRPLEQ---------QTLLLKQMEDVAKSYDARFVINTSELGEDD-P---LKQNATW---LFPSLKVPWYT 113 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~---------~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~-~---~~~~~~~---~~~~l~~P~~~ 113 (289)
.||+++||.|.|... .....+.+.+.+.+.+||+||++||+.... + ......+ .+...++|+|.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 489999998866421 122233333445568999999999985321 1 1111122 23456899999
Q ss_pred ecCCCcC
Q 022941 114 TKASKEK 120 (289)
Q Consensus 114 v~GNHD~ 120 (289)
++||||.
T Consensus 81 i~GNHD~ 87 (333)
T d1ii7a_ 81 IEGNHDR 87 (333)
T ss_dssp ECCTTTC
T ss_pred eCCCCcc
Confidence 9999994
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=5.6e-11 Score=95.30 Aligned_cols=173 Identities=6% Similarity=-0.011 Sum_probs=98.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh--hh------hhhhccCCCCCCCeEEecCCCcCC
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP--LK------QNATWLFPSLKVPWYTTKASKEKE 121 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~--~~------~~~~~~~~~l~~P~~~v~GNHD~~ 121 (289)
.|++++||.|. . ..++. ++.+..+..++|.+|++||+....+ .. ....+.+..+..|++.+.||||..
T Consensus 2 Mki~iiSDiHg-~--~~al~-~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHG-S--LPATE-RVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTT-B--HHHHH-HHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEeecCC-C--HHHHH-HHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCCcEEEecCCCCch
Confidence 37999999883 2 22232 3333344568999999999753221 00 111233455677999999999932
Q ss_pred CCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHh
Q 022941 122 VGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKK 201 (289)
Q Consensus 122 ~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~ 201 (289)
.......+ +........ ......+.+.|.+.......
T Consensus 78 ~~~~~~~~--~~~~~~~~~---------------------------------~~~~~~~~~~h~~~~~~~~~-------- 114 (184)
T d1su1a_ 78 VDQMLLHF--PITAPWQQV---------------------------------LLEKQRLFLTHGHLFGPENL-------- 114 (184)
T ss_dssp HHHHHSSS--CCCCSEEEE---------------------------------ECSSCEEEEECSSSSBTTBC--------
T ss_pred hhhhhhcc--cccccceee---------------------------------eeecceeEEecccccchhhh--------
Confidence 11110000 000000000 01123456666554433221
Q ss_pred hHHHHHHHHHHhCCeEEEeCCCccce-ecCCCeEEEecCCCCCCCCCcccCCcEEEEEEeCcEEEEEEEcCCCcEEEEEE
Q 022941 202 IYEPLHHIFMKFGVNTYLSKHGCIKY-SRQDSITYMENPGLIESGNGREMVDGFLLHKVSSLEILTYFVTLEGEVVYRTA 280 (289)
Q Consensus 202 ~~~~l~~ll~~~~V~~vl~GH~H~~~-~~~~gi~~i~~g~~~~~~~g~~~~~gf~~v~v~~~~i~~~~~~~~g~~~~~~~ 280 (289)
....+.+++++||.|.+. ...+++.++..|+.+.+.. .....|.+++. +..++..++ +++++.+.+
T Consensus 115 --------~~~~~~d~vv~GHtH~p~~~~~~~~~~iNpGS~~~pr~--~~~~sy~il~~--~~~~v~~~~-~~~v~~~~~ 181 (184)
T d1su1a_ 115 --------PALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKG--GNPASYGMLDN--DVLSVIALN-DQSIIAQVA 181 (184)
T ss_dssp --------CCCCTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCT--TCCCEEEEEET--TEEEEEETT-TCCEEEEEE
T ss_pred --------hhhcCCCEEEECCccceeEEEECCEEEEECCCCCCCCC--CCCCEEEEEEC--CCcEEEEEe-CCEEEEEEe
Confidence 122357899999999966 6678899998888766532 23467888774 455555443 567888777
Q ss_pred Ee
Q 022941 281 TR 282 (289)
Q Consensus 281 i~ 282 (289)
|.
T Consensus 182 ~~ 183 (184)
T d1su1a_ 182 IN 183 (184)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.89 E-value=3.5e-09 Score=85.35 Aligned_cols=110 Identities=9% Similarity=-0.009 Sum_probs=64.2
Q ss_pred CCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcCCCCceeEeEeCCCCCeEEEEEEcCCCccCCCCCCCCCC
Q 022941 79 YDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEKEVGCFQEQIRLPHGEALDIIGVNTGSLQGKIPTALPSA 158 (289)
Q Consensus 79 ~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~~~~~~~p~~~~~~~i~lDt~~~~~~~~~~~~~~ 158 (289)
.+.|.|+++||++......++..+.+++|+...+.|+||||.........+ . .+.|...
T Consensus 42 ~~~D~v~~LGD~~~~~~~~~~~~~~l~~L~g~~~lI~GNHD~~~~~~~~~~-----~----~~~~~~~------------ 100 (188)
T d1xm7a_ 42 KPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNHDKDKESLKEYF-----D----EIYDFYK------------ 100 (188)
T ss_dssp CTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTTCCCHHHHTTTC-----S----EEESSEE------------
T ss_pred CCCCEEEEeCCccccCCCHHHHHHHHHHCCCceEEEecCCCchhhhhhhch-----h----hHHHHHH------------
Confidence 456999999998632211222334556677788999999993211100000 0 0001000
Q ss_pred cHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccc
Q 022941 159 SGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 159 ~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
+- ......|+++|+|+...... ........+.....+.+++++|+||+|..
T Consensus 101 ------------~~-~~~g~~i~l~H~P~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lhGH~H~~ 151 (188)
T d1xm7a_ 101 ------------II-EHKGKRILLSHYPAKDPITE----RYPDRQEMVREIYFKENCDLLIHGHVHWN 151 (188)
T ss_dssp ------------EE-EETTEEEEEESSCSSCSSCC----SCHHHHHHHHHHHHHTTCSEEEECCCCCC
T ss_pred ------------Hh-hhCCeEEEEEeCCCcccccc----ccccchhHHHHHHHhcCceEEEEeeccCC
Confidence 00 01235799999999655432 11222345667888999999999999974
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=6.8e-07 Score=78.03 Aligned_cols=177 Identities=9% Similarity=0.020 Sum_probs=85.4
Q ss_pred CCccEEEEEEeCCCC--CC--------hhHHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChh-----hhhhhccCCCCCC
Q 022941 46 KGLDFYFISVTGGFR--PL--------EQQTLLLKQMEDVAKSYDAR-FVINTSELGEDDPL-----KQNATWLFPSLKV 109 (289)
Q Consensus 46 ~~~~~~f~~~gD~~~--g~--------~~~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~-----~~~~~~~~~~l~~ 109 (289)
+.-+++++.++|.|. .. .....+.+.+.+..+..+++ ++|.+||+....+. .+...+.+..++.
T Consensus 5 ~t~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g~ 84 (337)
T d1usha2 5 KTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY 84 (337)
T ss_dssp CEEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC
T ss_pred CeeEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcCC
Confidence 345799999999542 11 11122233333333334555 66679997543321 1111233444443
Q ss_pred CeEEecCCCcCCCCc------------------ee-----EeEeCC------CCCeEEEEEEcCCCccCC-CCCCCCC--
Q 022941 110 PWYTTKASKEKEVGC------------------FQ-----EQIRLP------HGEALDIIGVNTGSLQGK-IPTALPS-- 157 (289)
Q Consensus 110 P~~~v~GNHD~~~~~------------------~~-----~~~~~p------~~~~~~~i~lDt~~~~~~-~~~~~~~-- 157 (289)
- ..++||||+..|. .. ..+..| ++-.+-+|++-+...... .+....+
T Consensus 85 D-a~~~GNHEfd~G~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~ 163 (337)
T d1usha2 85 D-AMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIE 163 (337)
T ss_dssp C-EEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTTEE
T ss_pred e-EEEechhhhccchHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcccccCcc
Confidence 3 5778999954431 00 000111 133455677744322211 1111011
Q ss_pred -CcHHHHHHHHHHHHhh-cCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccc
Q 022941 158 -ASGDLLLNWLKSALEA-TNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIK 226 (289)
Q Consensus 158 -~~~~~Ql~WL~~~L~~-~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~ 226 (289)
....+..+..-++|++ ...+.+|+++|.+........... ....++...+...+||+++.||.|..
T Consensus 164 ~~d~~~~~~~~~~~l~~~~~~D~iI~lsH~G~~~d~~~~~~~---~~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 164 FRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNA---PGDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp ECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSC---CCHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cccHHHHHHHHHHHHhhccCCCEEEEecccCccccccccccc---chhHHHHHhCcccCceEEecCccCcc
Confidence 2223334334445654 356789999999876544321100 00112333334458999999999974
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.37 E-value=8.2e-06 Score=70.51 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=43.0
Q ss_pred CccEEEEEEeCCCCC---C---hh-------HHHHHHHHHHHHhhCCcc-EEEEcCCCCCCChhh-------hhhhccCC
Q 022941 47 GLDFYFISVTGGFRP---L---EQ-------QTLLLKQMEDVAKSYDAR-FVINTSELGEDDPLK-------QNATWLFP 105 (289)
Q Consensus 47 ~~~~~f~~~gD~~~g---~---~~-------~~~~~~~l~~~~~~~~pd-fvv~~GD~~~~~~~~-------~~~~~~~~ 105 (289)
-+.++|++..|.|.. . .. -.+++..+.+.+++.+++ +++.+||+-...+.. ....+.+.
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 378999999995421 1 00 123445565555556677 566899975433211 11123344
Q ss_pred CCCCCeEEecCCCcCCCC
Q 022941 106 SLKVPWYTTKASKEKEVG 123 (289)
Q Consensus 106 ~l~~P~~~v~GNHD~~~~ 123 (289)
.++.- ..++||||++.|
T Consensus 89 ~lgyD-a~t~GNHEfd~g 105 (322)
T d3c9fa2 89 KQDYD-LLTIGNHELYLW 105 (322)
T ss_dssp TSCCS-EECCCGGGSSSH
T ss_pred ccCCc-EEeecceecccc
Confidence 44322 688899996443
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.73 E-value=0.0001 Score=62.76 Aligned_cols=52 Identities=12% Similarity=-0.018 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHHHhhcCCCeEEEEeeccccccccccchhhHHhhHHHHHHHHHHh-CCeEEEeCCCccc
Q 022941 159 SGDLLLNWLKSALEATNGQWCIVVGFHPLVICEEHEEQLEAKKIYEPLHHIFMKF-GVNTYLSKHGCIK 226 (289)
Q Consensus 159 ~~~~Ql~WL~~~L~~~~~~~~iV~~HhP~~~~~~~~~~~~~~~~~~~l~~ll~~~-~V~~vl~GH~H~~ 226 (289)
...+..++..++|++...+-+|++.|..... + ..+.++. +||++++||.|..
T Consensus 163 d~~~~~~~~~~~l~~~~~DiiV~l~H~g~~~--------d--------~~la~~~~giD~ii~gh~h~~ 215 (302)
T d2z1aa2 163 DPYESAQKAVYELLAKGVNKIVVLSHLGYGE--------D--------LKLARRLVGVQVIVGGHSHTL 215 (302)
T ss_dssp CHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H--------HHHHTTCSSCCEEEECSSCCC
T ss_pred CHHHHHHHHHHHhhccCCCEEEEeeccCcch--------h--------hHHHhcCCCeeeeecCcccee
Confidence 4455666667777766667899999986311 0 1233333 7999999999973
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.33 E-value=8.4e-05 Score=59.88 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=41.6
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCChhhhhhhccCCCCCCCeEEecCCCcC
Q 022941 51 YFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDPLKQNATWLFPSLKVPWYTTKASKEK 120 (289)
Q Consensus 51 ~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~~~~~~~~~~~~l~~P~~~v~GNHD~ 120 (289)
|+++|||.|. .-..+.+.+.++....+.|-++++||+...++.-.+..+.+... -+.++.||||.
T Consensus 14 rI~vIgDIHG---~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~~vl~~l~~~--~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHG---CYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITFP--WFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTT---CHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGST--TEEECCCHHHH
T ss_pred eEEEEEeccc---CHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHHHHHHHhhcc--ccccccCcHHH
Confidence 7889999774 22334444444432345689999999976665433444444333 46899999993
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=92.28 E-value=0.57 Score=38.06 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=42.7
Q ss_pred ccEEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCc
Q 022941 48 LDFYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKE 119 (289)
Q Consensus 48 ~~~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD 119 (289)
...+++++||. .|...-..+.+.+.++.++.++||||..|.++..+. .-+..++.+.+.++- ..+.|||=
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvD-vIT~GNH~ 73 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-YITMGNHT 73 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-EEECCTTT
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHHHHHHHHHhCCc-EEEcCchh
Confidence 46799999992 222333455566777777889999999999854332 111122222122333 47889997
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=91.36 E-value=1.6 Score=34.66 Aligned_cols=169 Identities=12% Similarity=0.096 Sum_probs=82.3
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCcCCCCce---
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKEKEVGCF--- 125 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~--- 125 (289)
.+++++||. .|...-..+.+.+.++.+ +.||||..|.+...+. .-+..++.+-..++- ..+.|||=+...+.
T Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~Lk~--~~DfVIaNgENaa~G~Git~k~~~~L~~~GVD-vIT~GNH~wdkkei~~~ 76 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGLRAVGLHLPDIRD--RYDLVIANGENAARGKGLDRRSYRLLREAGVD-LVSLGNHAWDHKEVYAL 76 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHGG--GCSEEEEECTTTTTTSSCCHHHHHHHHHHTCC-EEECCTTTTSCTTHHHH
T ss_pred CeEEEEecc-CCHHHHHHHHHHhHHHHh--hCCEEEEeeeccCCCcCCCHHHHHHHHHhCCC-EEEcCcccccchhhhhh
Confidence 378999992 222333445555555533 4699999999854332 111122222122333 47889998433221
Q ss_pred --eEeE----eCCC---CCeEEEE--------EEc--CCCccCCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 022941 126 --QEQI----RLPH---GEALDII--------GVN--TGSLQGKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHP 186 (289)
Q Consensus 126 --~~~~----~~p~---~~~~~~i--------~lD--t~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP 186 (289)
.+++ ++|. +.++.++ .++ ...+. .+.+ ..-+-+ ++.+.+.+.+.+||=+|--
T Consensus 77 i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm-----~~~d-~PF~~~---d~~~~~~~~~~i~VDfHaE 147 (252)
T d2z06a1 77 LESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFM-----DPLD-DPFRAL---DRLLEEEKADYVLVEVHAE 147 (252)
T ss_dssp HHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTS-----CCCC-CHHHHH---HHHHHHCCCSEEEEEEECS
T ss_pred hccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccC-----CCCC-CHHHHH---HHHHhhcCccEEEEEcccc
Confidence 1112 2221 1222222 221 11111 1111 122222 2334444556667667632
Q ss_pred ccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce---e-cCCCeEEEecCCCCCC
Q 022941 187 LVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY---S-RQDSITYMENPGLIES 244 (289)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~---~-~~~gi~~i~~g~~~~~ 244 (289)
. + .+. .-+...-+-+|.+|+-=|+|.+. + -.+|+-|++--+.+++
T Consensus 148 a-T---------SEK---~A~g~~ldGrvsavvGTHTHV~TaD~rILp~GTayiTDvGM~G~ 196 (252)
T d2z06a1 148 A-T---------SEK---MALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMTGT 196 (252)
T ss_dssp C-H---------HHH---HHHHHHHBTTBSEEEEESSCSCBSCCEECTTSCEEESCCCCBEE
T ss_pred h-h---------hhh---eeeeEecCCCEEEEEecCccccccccEEecCCeEEEccCccccc
Confidence 2 1 111 11122333479999999999976 2 2478999987665444
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=90.04 E-value=2.8 Score=33.28 Aligned_cols=172 Identities=10% Similarity=0.046 Sum_probs=83.5
Q ss_pred EEEEEEeCCCCCChhHHHHHHHHHHHHhhCCccEEEEcCCCCCCCh-hhhhhhccCCCCCCCeEEecCCCcCCCCce---
Q 022941 50 FYFISVTGGFRPLEQQTLLLKQMEDVAKSYDARFVINTSELGEDDP-LKQNATWLFPSLKVPWYTTKASKEKEVGCF--- 125 (289)
Q Consensus 50 ~~f~~~gD~~~g~~~~~~~~~~l~~~~~~~~pdfvv~~GD~~~~~~-~~~~~~~~~~~l~~P~~~v~GNHD~~~~~~--- 125 (289)
.+++++||. .|...-..+.+.|.++.+ +.||||..|.++..+. .-+..++.+-++++- ..+.|||=+...+.
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~lk~--~~DfVIaNgENaa~G~Git~~~~~~l~~~GvD-viT~GNH~wdkkei~~~ 76 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTIRP--QFDFVIVNMENSAGGFGMHRDAARGALEAGAG-CLTLGNHAWHHKDIYPM 76 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHGG--GCSEEEEECTBTTTTSSCCHHHHHHHHHHTCS-EEECCTTTTSSTTHHHH
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHHHh--hCCEEEECCccCCCCcCCCHHHHHHHHHcCCc-EEEcCchhhcchhHHHH
Confidence 378999992 222233445555555533 4699999999854332 111122222122333 47889998322221
Q ss_pred ---e-EeE----eCCC----CCeEEEEEEcCCCcc-------CCCCCCCCCCcHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 022941 126 ---Q-EQI----RLPH----GEALDIIGVNTGSLQ-------GKIPTALPSASGDLLLNWLKSALEATNGQWCIVVGFHP 186 (289)
Q Consensus 126 ---~-~~~----~~p~----~~~~~~i~lDt~~~~-------~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~~iV~~HhP 186 (289)
+ .++ .+|. +.++.++ +++... ....-.+.+ ..- .-+++.|++.+.+.+||=+|--
T Consensus 77 i~~~~~~ilRP~N~p~~~~PG~G~~i~--~~~g~ki~ViNl~Gr~fM~~~d-~PF---~~~d~~l~~~~~~~i~VDfHaE 150 (255)
T d1t70a_ 77 LSEDTYPIVRPLNYADPGTPGVGWRTF--DVNGEKLTVVNLLGRVFMEAVD-NPF---RTMDALLERDDLGTVFVDFHAE 150 (255)
T ss_dssp HHTTCSCEECCSCCCCTTCSSCSEEEE--ECSSSEEEEEEEECCTTSCCCS-CHH---HHHHHHTTCSSCCEEEEEEECS
T ss_pred HhhcchhhhhhhccCCCCCCCceEEEE--eeccCcEEEEEeccccccCccc-CHH---HHHHHHHhhcCCCeEEEEccch
Confidence 0 112 2221 2222222 222110 000011111 111 2245556655556666667732
Q ss_pred ccccccccchhhHHhhHHHHHHHHHHhCCeEEEeCCCccce---e-cCCCeEEEecCCCCCC
Q 022941 187 LVICEEHEEQLEAKKIYEPLHHIFMKFGVNTYLSKHGCIKY---S-RQDSITYMENPGLIES 244 (289)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~vl~GH~H~~~---~-~~~gi~~i~~g~~~~~ 244 (289)
. + .+. .-+...-+-+|.+|+-=|+|.+. + -.+|+-|++--+.+++
T Consensus 151 a-T---------SEK---~A~g~~ldGrvsav~GTHTHV~TaD~rIlp~GTay~TDvGMtG~ 199 (255)
T d1t70a_ 151 A-T---------SEK---EAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQTDAGFTGP 199 (255)
T ss_dssp C-H---------HHH---HHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEESCCCCBEE
T ss_pred h-H---------HHH---HHHHhhhcCcEEEEEecCcccccccceEecCCcEEEecCccccc
Confidence 2 1 111 11122334479999999999976 2 2478999987665444
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.91 E-value=0.31 Score=40.81 Aligned_cols=23 Identities=4% Similarity=0.046 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCeEEEeCCCcc
Q 022941 203 YEPLHHIFMKFGVNTYLSKHGCI 225 (289)
Q Consensus 203 ~~~l~~ll~~~~V~~vl~GH~H~ 225 (289)
.+.+...++++++++++-||.-.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He~v 255 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHEVK 255 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 36778899999999999999855
|