Citrus Sinensis ID: 022948

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK
cccccccccccHHHHHHHHHHHHHccccEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccEEEEccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccEEcccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccHHccccccEEEcccccccccEEEEEccccccEEEEEEEcccHHHHHHHHHHHHcc
cccccccccccHHHHHHHHHHHHHHcccEEEEEccccccEEEEEccccEEcHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccEEEEEcccHHHHHHHHHHHccccccccccccccccHEHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcEEEEEccccccEEEEcEEEEEEcccccccccEEEEEccccccEEEEEEEcccHHHHHHHHHHHHcc
mfpnhipnpedkTAMALTRAAVLEnnadlgvvfdtdvdrsgvvdnkgnpingDKLIALMSAIVLkehpgttivtdarTSMALTKFITdrggnhclyrvgyrNVIDKGVHLNEDGIETHLMMEtsghgalkenyflddgAYMVVKIIIQMVRMklegsdegIGSLIKDLEEPLESIELRMNIisepryakakGSEAIEEFRKYIEEGRlqgweldscgdcwvsegclvdsnespaaIDARMYRakvtdeehgqyGWIHLRqsihnpniavnvqsmvpggcrSITKSLRDK
mfpnhipnpedKTAMALTRAAVLENNADLgvvfdtdvdrsgvvdnkgnpingdKLIALMSAIVLKEHpgttivtdartSMALTKFItdrggnhcLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRmniisepryakakgseAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNvqsmvpggcrsitkslrdk
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK
****************LTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGG***********
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVR************LIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLR**
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRS********
*F**HIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLR**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query289 2.2.26 [Sep-21-2011]
P45632469 Phosphomannomutase OS=Azo yes no 0.564 0.347 0.322 1e-19
Q88BD4465 Phosphomannomutase/phosph yes no 0.484 0.301 0.376 9e-18
P26276463 Phosphomannomutase/phosph yes no 0.612 0.382 0.303 1e-16
Q88C93463 Phosphomannomutase/phosph yes no 0.608 0.380 0.306 2e-16
P26341456 Phosphomannomutase OS=Sal yes no 0.532 0.337 0.303 2e-14
Q01411456 Phosphomannomutase OS=Sal N/A no 0.536 0.339 0.305 3e-14
P40391460 Phosphoglucomutase OS=Nei yes no 0.484 0.304 0.315 9e-14
P24175456 Phosphomannomutase OS=Esc N/A no 0.539 0.342 0.301 2e-13
O85343456 Phosphomannomutase OS=Esc N/A no 0.581 0.368 0.293 2e-13
P40390460 Phosphoglucomutase OS=Nei yes no 0.647 0.406 0.274 3e-13
>sp|P45632|EXOC_AZOBR Phosphomannomutase OS=Azospirillum brasilense GN=exoC PE=3 SV=2 Back     alignment and function desciption
 Score = 97.1 bits (240), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 23/186 (12%)

Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P  +  +   +AAV E+  D+G+ FD D DR G +D+ G  + GD+L+A+ +A
Sbjct: 208 FPNHHPDPTVEKNLVDLKAAVAEHGCDIGIGFDGDGDRIGAIDHLGRVVWGDQLVAIYAA 267

Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            VLK HPG TI+ D + S  L   I   GGN  +++ G+  +  K   + E G  + L  
Sbjct: 268 DVLKSHPGATIIADVKASQTLFDEIARLGGNPLMWKTGHSLLKAK---MAETG--SPLAG 322

Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRM- 179
           E SGH    + ++  DD  Y  V++I                 L+  L +PL  +  R+ 
Sbjct: 323 EMSGHIFFADKWYGFDDALYCAVRLI----------------GLVSKLNQPLSELRDRLP 366

Query: 180 NIISEP 185
           ++++ P
Sbjct: 367 DVVNTP 372

Azospirillum brasilense (taxid: 192)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 8
>sp|Q88BD4|ALGC_PSESM Phosphomannomutase/phosphoglucomutase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algC PE=3 SV=1 Back     alignment and function description
>sp|P26276|ALGC_PSEAE Phosphomannomutase/phosphoglucomutase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=algC PE=1 SV=4 Back     alignment and function description
>sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1 Back     alignment and function description
>sp|P26341|MANB_SALTY Phosphomannomutase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=manB PE=3 SV=2 Back     alignment and function description
>sp|Q01411|MANB_SALMO Phosphomannomutase OS=Salmonella montevideo GN=manB PE=3 SV=1 Back     alignment and function description
>sp|P40391|PGM_NEIMB Phosphoglucomutase OS=Neisseria meningitidis serogroup B (strain MC58) GN=pgm PE=3 SV=2 Back     alignment and function description
>sp|P24175|MANB_ECOLI Phosphomannomutase OS=Escherichia coli (strain K12) GN=manB PE=3 SV=1 Back     alignment and function description
>sp|O85343|MANB_ECO57 Phosphomannomutase OS=Escherichia coli O157:H7 GN=manB PE=3 SV=1 Back     alignment and function description
>sp|P40390|PGM_NEIGO Phosphoglucomutase OS=Neisseria gonorrhoeae GN=pgm PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query289
255573758 620 phosphoglucomutase, putative [Ricinus co 1.0 0.466 0.868 1e-152
224101859 554 predicted protein [Populus trichocarpa] 1.0 0.521 0.861 1e-150
225424281 617 PREDICTED: phosphomannomutase/phosphoglu 1.0 0.468 0.840 1e-148
356576034 619 PREDICTED: phosphomannomutase/phosphoglu 1.0 0.466 0.847 1e-148
357475239 621 Phosphoglucosamine mutase [Medicago trun 0.996 0.463 0.843 1e-146
15223252 615 phosphoglucomutase-like protein [Arabido 1.0 0.469 0.817 1e-143
297838899 615 hypothetical protein ARALYDRAFT_476213 [ 1.0 0.469 0.813 1e-142
534982 583 phosphoglucomutase [Spinacia oleracea] 1.0 0.495 0.799 1e-140
449466867 616 PREDICTED: phosphomannomutase/phosphoglu 1.0 0.469 0.802 1e-139
449522169 575 PREDICTED: phosphomannomutase/phosphoglu 1.0 0.502 0.802 1e-139
>gi|255573758|ref|XP_002527800.1| phosphoglucomutase, putative [Ricinus communis] gi|223532835|gb|EEF34610.1| phosphoglucomutase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 251/289 (86%), Positives = 275/289 (95%)

Query: 1   MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
           MFPNHIPNPEDKTAMALTRAAVL+N+ADLG+VFDTDVDRSGVVDNKGNPINGDKLIALMS
Sbjct: 306 MFPNHIPNPEDKTAMALTRAAVLDNSADLGIVFDTDVDRSGVVDNKGNPINGDKLIALMS 365

Query: 61  AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
           AIVL+EHPGTTIVTDARTSMAL++FITDRGG HCLYRVGYRNVIDKGVHLNEDGIE HLM
Sbjct: 366 AIVLREHPGTTIVTDARTSMALSRFITDRGGQHCLYRVGYRNVIDKGVHLNEDGIEAHLM 425

Query: 121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           METSGHGALKENYFLDDGAYMVVKIII+MVRMKL GSDEGIGSLIKDLEEP E IELRMN
Sbjct: 426 METSGHGALKENYFLDDGAYMVVKIIIEMVRMKLAGSDEGIGSLIKDLEEPREVIELRMN 485

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240
           +ISEPR+AKAK  E IE+FR +IEEG+L+GWELD CGDCWVS+GCLVDSN++PAA+DA M
Sbjct: 486 VISEPRHAKAKAVEVIEKFRNFIEEGKLEGWELDYCGDCWVSDGCLVDSNDTPAAVDAYM 545

Query: 241 YRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK 289
           YR KV+DEEHGQ+GW+HLRQSIHNPNIAVN+QSMVPG C+S+T+ LRDK
Sbjct: 546 YRTKVSDEEHGQHGWVHLRQSIHNPNIAVNMQSMVPGACQSMTEVLRDK 594

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224101859|ref|XP_002312448.1| predicted protein [Populus trichocarpa] gi|222852268|gb|EEE89815.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424281|ref|XP_002280911.1| PREDICTED: phosphomannomutase/phosphoglucomutase [Vitis vinifera] gi|297737677|emb|CBI26878.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576034|ref|XP_003556140.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Glycine max] Back     alignment and taxonomy information
>gi|357475239|ref|XP_003607905.1| Phosphoglucosamine mutase [Medicago truncatula] gi|355508960|gb|AES90102.1| Phosphoglucosamine mutase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15223252|ref|NP_177239.1| phosphoglucomutase-like protein [Arabidopsis thaliana] gi|5902394|gb|AAD55496.1|AC008148_6 Putative phosphoglucomutase [Arabidopsis thaliana] gi|20260528|gb|AAM13162.1| putative phosphoglucomutase [Arabidopsis thaliana] gi|30725426|gb|AAP37735.1| At1g70820 [Arabidopsis thaliana] gi|332196999|gb|AEE35120.1| phosphoglucomutase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297838899|ref|XP_002887331.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] gi|297333172|gb|EFH63590.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|534982|emb|CAA53507.1| phosphoglucomutase [Spinacia oleracea] Back     alignment and taxonomy information
>gi|449466867|ref|XP_004151147.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522169|ref|XP_004168100.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query289
TAIR|locus:2014025615 AT1G70820 "AT1G70820" [Arabido 1.0 0.469 0.817 8.1e-131
UNIPROTKB|Q69TT2625 OSJNBa0026P23.2-1 "Os06g047620 0.996 0.460 0.704 5.9e-112
UNIPROTKB|A8J352503 CHLREDRAFT_119219 "Predicted p 0.733 0.421 0.525 1.1e-60
UNIPROTKB|Q7XHZ2543 P0475E07.126 "Putative phospho 0.685 0.364 0.528 1.6e-55
UNIPROTKB|Q88BD4465 algC "Phosphomannomutase/phosp 0.588 0.365 0.327 4e-19
UNIPROTKB|Q603M2463 MCA2782 "Phosphoglucomutase/ph 0.750 0.468 0.292 6.4e-18
UNIPROTKB|A6VEC9868 algC "Phosphomannomutase AlgC" 0.612 0.203 0.313 1.8e-17
TIGR_CMR|CBU_0294471 CBU_0294 "phosphomannomutase" 0.605 0.371 0.322 1.1e-16
UNIPROTKB|Q4K3S1465 algC "Phosphomannomutase/phosp 0.612 0.380 0.292 1.3e-16
UNIPROTKB|P24175456 cpsG "phosphomannomutase" [Esc 0.536 0.339 0.305 7.5e-13
TAIR|locus:2014025 AT1G70820 "AT1G70820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
 Identities = 237/290 (81%), Positives = 272/290 (93%)

Query:     1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
             MFPNHIPNPE+K AM  TRAAVLEN+ADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS
Sbjct:   302 MFPNHIPNPENKIAMQHTRAAVLENSADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 361

Query:    61 AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
             AIVLKEHPG+T+VTDARTSM LT+FIT+RGG HCLYRVGYRNVIDKGV LN+DGIETHLM
Sbjct:   362 AIVLKEHPGSTVVTDARTSMGLTRFITERGGRHCLYRVGYRNVIDKGVELNKDGIETHLM 421

Query:   121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
             METSGHGA+KEN+FLDDGAYMVVKIII+MVRM+L GS+EGIGSLI+DLEEPLE++ELR+N
Sbjct:   422 METSGHGAVKENHFLDDGAYMVVKIIIEMVRMRLAGSNEGIGSLIEDLEEPLEAVELRLN 481

Query:   181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240
             I+SEPR AKAKG EAIE FR+YIEEG+L+GWEL +CGDCWV+EGCLVDSN+ P+AIDA M
Sbjct:   482 ILSEPRDAKAKGIEAIETFRQYIEEGKLKGWELGTCGDCWVTEGCLVDSNDHPSAIDAHM 541

Query:   241 YRAKVTDEEHGQ-YGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK 289
             YRA+V+DEE G+ YGW+H+RQSIHNPNIA+N+QSM+PGGC S+T+  RD+
Sbjct:   542 YRARVSDEESGEEYGWVHMRQSIHNPNIALNMQSMLPGGCLSMTRIFRDQ 591
GO:0004610 "phosphoacetylglucosamine mutase activity" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0006048 "UDP-N-acetylglucosamine biosynthetic process" evidence=IBA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016868 "intramolecular transferase activity, phosphotransferases" evidence=IEA;ISS
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
UNIPROTKB|Q69TT2 OSJNBa0026P23.2-1 "Os06g0476200 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J352 CHLREDRAFT_119219 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XHZ2 P0475E07.126 "Putative phosphoglucomutase, chloroplast" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q88BD4 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|Q603M2 MCA2782 "Phosphoglucomutase/phosphomannomutase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)] Back     alignment and assigned GO terms
UNIPROTKB|A6VEC9 algC "Phosphomannomutase AlgC" [Pseudomonas aeruginosa PA7 (taxid:381754)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0294 CBU_0294 "phosphomannomutase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q4K3S1 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|P24175 cpsG "phosphomannomutase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query289
PLN02371583 PLN02371, PLN02371, phosphoglucosamine mutase fami 1e-171
cd03089443 cd03089, PMM_PGM, The phosphomannomutase/phosphogl 1e-72
COG1109464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 1e-26
TIGR03990443 TIGR03990, Arch_GlmM, phosphoglucosamine mutase 9e-19
PRK15414456 PRK15414, PRK15414, phosphomannomutase CpsG; Provi 2e-16
PRK09542445 PRK09542, manB, phosphomannomutase/phosphoglucomut 6e-16
cd03084355 cd03084, phosphohexomutase, The alpha-D-phosphohex 6e-15
cd03087439 cd03087, PGM_like1, This archaeal PGM-like (phosph 4e-14
cd05802434 cd05802, GlmM, GlmM is a bacterial phosphoglucosam 7e-14
pfam02879103 pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphom 1e-12
TIGR01455443 TIGR01455, glmM, phosphoglucosamine mutase 3e-12
pfam02880112 pfam02880, PGM_PMM_III, Phosphoglucomutase/phospho 8e-12
PRK10887443 PRK10887, glmM, phosphoglucosamine mutase; Provisi 1e-11
PRK14314450 PRK14314, glmM, phosphoglucosamine mutase; Provisi 2e-11
PRK14323440 PRK14323, glmM, phosphoglucosamine mutase; Provisi 2e-10
cd05805441 cd05805, MPG1_transferase, GTP-mannose-1-phosphate 9e-10
PRK14324446 PRK14324, glmM, phosphoglucosamine mutase; Provisi 6e-09
cd05800461 cd05800, PGM_like2, This PGM-like (phosphoglucomut 1e-08
PRK14317465 PRK14317, glmM, phosphoglucosamine mutase; Provisi 2e-08
PRK14318448 PRK14318, glmM, phosphoglucosamine mutase; Provisi 6e-08
PRK14321449 PRK14321, glmM, phosphoglucosamine mutase; Provisi 8e-08
PRK14315448 PRK14315, glmM, phosphoglucosamine mutase; Provisi 2e-07
cd05803445 cd05803, PGM_like4, This PGM-like (phosphoglucomut 2e-07
PRK14316448 PRK14316, glmM, phosphoglucosamine mutase; Provisi 4e-07
PRK14319430 PRK14319, glmM, phosphoglucosamine mutase; Provisi 9e-06
PRK14322429 PRK14322, glmM, phosphoglucosamine mutase; Provisi 3e-05
cd05799487 cd05799, PGM2, This CD includes PGM2 (phosphogluco 2e-04
PRK14320443 PRK14320, glmM, phosphoglucosamine mutase; Provisi 3e-04
>gnl|CDD|215211 PLN02371, PLN02371, phosphoglucosamine mutase family protein Back     alignment and domain information 
 Score =  484 bits (1249), Expect = e-171
 Identities = 157/290 (54%), Positives = 198/290 (68%), Gaps = 26/290 (8%)

Query: 1   MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
           MFPNHIPNPEDK AM+ T  AVL N ADLG++FDTDVDRS VVD+ G  IN ++LIALMS
Sbjct: 301 MFPNHIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIALMS 360

Query: 61  AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
           AIVL+EHPGTTIVTD+ TS  LT FI  +GG H  ++ GY+NVIDKGV LN DG ETHLM
Sbjct: 361 AIVLEEHPGTTIVTDSVTSDGLTTFIEKKGGKHHRFKRGYKNVIDKGVRLNSDGEETHLM 420

Query: 121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           +ETSGHGALKEN+FLDDGAY+ VKIII++VRM+  G+  G+G LI+DLEEPLE++ELR+ 
Sbjct: 421 IETSGHGALKENHFLDDGAYLAVKIIIELVRMRAAGAGGGLGDLIEDLEEPLEAVELRLK 480

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEE-GRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR 239
           I+ E +  KA G E +E  R  IE  G+L+G  ++  G                      
Sbjct: 481 ILDEGKDFKAYGEEVLEHLRNSIESDGKLEGAPVNYEG---------------------- 518

Query: 240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDK 289
               +V+DE  G  GW  LRQS+H+P I +N++S  PGG + +   +   
Sbjct: 519 ---VRVSDEGEGFGGWFLLRQSLHDPVIPLNIESSSPGGAQKMALVVLTW 565

Length = 583
>gnl|CDD|100091 cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|234431 TIGR03990, Arch_GlmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional Back     alignment and domain information
>gnl|CDD|236557 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100089 cd03087, PGM_like1, This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100095 cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>gnl|CDD|217264 pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Back     alignment and domain information
>gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|217265 pfam02880, PGM_PMM_III, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Back     alignment and domain information
>gnl|CDD|236787 PRK10887, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100097 cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>gnl|CDD|237671 PRK14317, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|237672 PRK14318, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|237669 PRK14315, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100096 cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>gnl|CDD|237670 PRK14316, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100092 cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 289
cd03089443 PMM_PGM The phosphomannomutase/phosphoglucomutase 100.0
PRK09542445 manB phosphomannomutase/phosphoglucomutase; Review 100.0
PLN02371583 phosphoglucosamine mutase family protein 100.0
cd05800461 PGM_like2 This PGM-like (phosphoglucomutase-like) 100.0
PRK14321449 glmM phosphoglucosamine mutase; Provisional 100.0
PRK15414456 phosphomannomutase CpsG; Provisional 100.0
cd05803445 PGM_like4 This PGM-like (phosphoglucomutase-like) 100.0
cd03087439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 100.0
cd05805441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 100.0
PTZ00150584 phosphoglucomutase-2-like protein; Provisional 100.0
cd05801522 PGM_like3 This bacterial PGM-like (phosphoglucomut 100.0
cd03085548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
PRK07564543 phosphoglucomutase; Validated 100.0
COG1109464 {ManB} Phosphomannomutase [Carbohydrate transport 100.0
TIGR01132543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 100.0
cd05799487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 100.0
PRK10887443 glmM phosphoglucosamine mutase; Provisional 100.0
cd03088459 ManB ManB is a bacterial phosphomannomutase (PMM) 100.0
PRK14317465 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14315448 glmM phosphoglucosamine mutase; Provisional 100.0
PLN02307579 phosphoglucomutase 100.0
cd03084355 phosphohexomutase The alpha-D-phosphohexomutase su 100.0
PRK14316448 glmM phosphoglucosamine mutase; Provisional 100.0
cd05802434 GlmM GlmM is a bacterial phosphoglucosamine mutase 100.0
PRK14324446 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14314450 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14322429 glmM phosphoglucosamine mutase; Provisional 100.0
TIGR01455443 glmM phosphoglucosamine mutase. This model describ 100.0
PRK14320443 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14323440 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14318448 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14319430 glmM phosphoglucosamine mutase; Provisional 100.0
cd03086513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 100.0
KOG1220607 consensus Phosphoglucomutase/phosphomannomutase [C 100.0
PTZ00302585 N-acetylglucosamine-phosphate mutase; Provisional 100.0
PLN02895562 phosphoacetylglucosamine mutase 100.0
COG0033524 Pgm Phosphoglucomutase [Carbohydrate transport and 99.95
KOG0625558 consensus Phosphoglucomutase [Carbohydrate transpo 99.94
PF02880113 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase 99.94
KOG2537539 consensus Phosphoglucomutase/phosphomannomutase [C 99.68
PF0040873 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, 99.42
PF02879104 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, 99.12
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information 
Probab=100.00  E-value=2.4e-54  Score=416.93  Aligned_cols=241  Identities=33%  Similarity=0.501  Sum_probs=213.7

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948            1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM   80 (289)
Q Consensus         1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~   80 (289)
                      +||++.|||+.+++++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++.+++..||+|++||.
T Consensus       200 ~F~~~~p~p~~~~~l~~l~~~v~~~~adlgia~D~DaDR~~ivd~~G~~l~~d~~~~lla~~ll~~~~~~~vv~~v~ss~  279 (443)
T cd03089         200 TFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGDRLGVVDEKGEIIWGDRLLALFARDILKRNPGATIVYDVKCSR  279 (443)
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCcceeEEECCCCcEeCHHHHHHHHHHHHHHHCCCCeEEEecccch
Confidence            59999999988999999999999999999999999999999999999999999999999999998776667999999999


Q ss_pred             HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCC-CccCCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948           81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKE-NYFLDDGAYMVVKIIIQMVRMKLEGSDE  159 (289)
Q Consensus        81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~-~~~~~Dgi~a~l~ll~e~~~~~~~~~~~  159 (289)
                      +++++++++|+++++|+||++|+++.|.+.+     ++||||+|||++|++ +.+++|||+++++++ ||++.    +++
T Consensus       280 ~~~~ia~~~g~~v~~t~vG~k~v~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~~Dgi~a~l~il-e~la~----~~~  349 (443)
T cd03089         280 NLYDFIEEAGGKPIMWKTGHSFIKAKMKETG-----ALLAGEMSGHIFFKDRWYGFDDGIYAALRLL-ELLSK----SGK  349 (443)
T ss_pred             HHHHHHHHcCCeEEEecCcHHHHHHHHHHhC-----CcEEEeccceEEEcCCcCCCccHHHHHHHHH-HHHHh----cCC
Confidence            9999999999999999999999999999876     589999999999999 999999999999776 99998    899


Q ss_pred             CHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccC
Q 022948          160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR  239 (289)
Q Consensus       160 ~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~D  239 (289)
                      +|+++++++|+++...  ++++.  |+|.+  ++++|++|.+.....                         ..+++++|
T Consensus       350 ~Lsel~~~~p~~~~~~--~~~~~--~~~~~--k~~~~~~l~~~~~~~-------------------------~~~~~~~D  398 (443)
T cd03089         350 TLSELLADLPKYFSTP--EIRIP--VTEED--KFAVIERLKEHFEFP-------------------------GAEIIDID  398 (443)
T ss_pred             CHHHHHHhccccCCCC--ceecc--CCchh--HHHHHHHHHHHhccc-------------------------cCCeeeec
Confidence            9999999999854332  33333  33433  468999998755320                         01467899


Q ss_pred             ceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948          240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD  288 (289)
Q Consensus       240 Giki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~  288 (289)
                      |+|+.|      ++||+|||||||||++|||+||+|++.++++++++.+
T Consensus       399 Giki~~------~~~WvliRpSgtEP~iriy~Ea~~~~~a~~l~~~~~~  441 (443)
T cd03089         399 GVRVDF------EDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRK  441 (443)
T ss_pred             CEEEEE------CCeeEEEeecCCCCEEEEEEEeCCHHHHHHHHHHHHh
Confidence            999999      6899999999999999999999999999999998764

g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PLN02307 phosphoglucomutase Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query289
3rsm_A463 Crystal Structure Of S108c Mutant Of PmmPGM Length 7e-18
2fkf_A462 PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMON 7e-18
2h4l_X463 Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 7e-18
1k2y_X463 Crystal Structure Of Phosphomannomutase/phosphogluc 7e-18
1p5d_X463 Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Lengt 8e-18
2fkm_X462 Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisph 8e-18
3bkq_X463 Structure Of The P368g Mutant Of PmmPGM IN COMPLEX 1e-17
1k35_A463 Crystal Structure Of Phosphomannomutase/phosphogluc 2e-17
3uw2_A485 X-Ray Crystal Structure Of PhosphoglucomutasePHOSPH 1e-14
1wqa_A455 Crystal Structure Of Pyrococcus Horikoshii Phosphom 1e-07
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM Length = 463 Back     alignment and structure 
Iteration: 1

 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P     +    A V   NADLG+ FD D DR GVV N G  I  D+L+ L + 
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K   + E G    L  
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           E SGH   KE +F  DDG Y   + +++++      S+    +   D+  P    E+ + 
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
           +  + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 463 Back     alignment and structure
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase S108a Mutant From P. Aeruginosa Length = 463 Back     alignment and structure
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Length = 463 Back     alignment and structure
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH ITS SUBSTRATE Length = 463 Back     alignment and structure
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase From P.aeruginosa Length = 463 Back     alignment and structure
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein (Bth_i1489)from Burkholderia Thailandensis Length = 485 Back     alignment and structure
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+ Length = 455 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query289
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 3e-34
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 4e-33
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 1e-20
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 6e-16
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 3e-15
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 1e-12
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 5e-12
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 6e-08
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 9e-08
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 9e-07
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 2e-05
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 1e-04
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Length = 463 Back     alignment and structure
 Score =  128 bits (323), Expect = 3e-34
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P     +    A V   NADLG+ FD D DR GVV N G  I  D+L+ L + 
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269

Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K   + E G    L  
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETGAL--LAG 324

Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           E SGH   KE +F  DDG Y   +++  + +            +       + + E+ + 
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAARLLEILSQ-----DQRDSEHVFSAFPSDISTPEINIT 379

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELD----SCGDCW 220
           +  + ++A       IE  ++  + G      LD         W
Sbjct: 380 VTEDSKFA------IIEALQRDAQWGEGNITTLDGVRVDYPKGW 417
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Length = 485 Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Length = 455 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Length = 455 Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Length = 469 Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Length = 443 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Length = 544 Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query289
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 100.0
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 100.0
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 100.0
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 100.0
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 100.0
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
4hjh_A481 Phosphomannomutase; structural genomics, niaid, na 100.0
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 100.0
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 100.0
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 100.0
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 100.0
1wjw_A112 Phosphoacetylglucosamine mutase; carbohydrate meta 99.39
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
Probab=100.00  E-value=8.9e-54  Score=415.00  Aligned_cols=241  Identities=24%  Similarity=0.438  Sum_probs=211.8

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeEEEEcCCCcccChhHHHHHHHHHHHhhCCCCeEEEcccCCH
Q 022948            1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM   80 (289)
Q Consensus         1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~l~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~   80 (289)
                      +||+++|||+.+++++.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++++++++..||+|++||.
T Consensus       231 ~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~~~~~~~vv~~v~ss~  310 (485)
T 3uw2_A          231 NFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTR  310 (485)
T ss_dssp             TCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence            59999999999999999999999999999999999999999999999999999999999999999888888999999999


Q ss_pred             HHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecCCCcc-CCCHHHHHHHHHHHHHHHHhcCCCC
Q 022948           81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE  159 (289)
Q Consensus        81 ~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~~~~~-~~Dgi~a~l~ll~e~~~~~~~~~~~  159 (289)
                      .++++++++|+++++|+|||+||+++|.+.+     +.||||+|||++|+++++ ++|||+++++++ ++++.    ++ 
T Consensus       311 ~l~~~~~~~g~~~~~t~vG~k~i~~~m~~~~-----~~~ggE~SG~~~f~~~~~~~~Dgi~aal~ll-e~la~----~~-  379 (485)
T 3uw2_A          311 NLARWVREKGGEPLMWKTGHSLVKAKLRETG-----APLAGEMSGHVFFKDRWYGFDDGLYTGARLL-EILAR----VA-  379 (485)
T ss_dssp             HHHHHHHHTTCEEEEECSSHHHHHHHHHHHC-----CSEEECTTSCEEETTTTCSSBCHHHHHHHHH-HHHTT----SS-
T ss_pred             HHHHHHHHcCCEEEEEcCChHHHHHHHHhhc-----ccceecccCcEeeccccCCCCcHHHHHHHHH-HHHHh----cC-
Confidence            9999999999999999999999999999987     479999999999999765 799999999776 99887    77 


Q ss_pred             CHHHHHHHchhhhccceeEEEeccChhhHhhhHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccccC
Q 022948          160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR  239 (289)
Q Consensus       160 ~l~~ll~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~D  239 (289)
                      +|+++++++|.++.+.+.+++|+.    .+  +.++|++|.+...   +++                     ..+++.+|
T Consensus       380 ~lsel~~~lp~~~~~~~~~v~~~~----~~--~~~~~~~l~~~~~---~~~---------------------~~~~~~~D  429 (485)
T 3uw2_A          380 DPSALLNGLPNAVSTPELQLKLEE----GE--NVKLIDKLRADAK---FDG---------------------ADEVVTID  429 (485)
T ss_dssp             CHHHHHHTSCCCEECCCEEC------------CTHHHHHHHHSCC---CTT---------------------CSEEECSS
T ss_pred             CHHHHHHHhhHhhCCceEEEeCCc----hh--HHHHHHHHHhhhc---ccc---------------------cccccccc
Confidence            999999999987755556777763    22  2478999877542   111                     12467899


Q ss_pred             ceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhHHHHHHHHHhc
Q 022948          240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRD  288 (289)
Q Consensus       240 Giki~~~~~~~~~~~w~liRpSgTEP~iriy~Ea~~~~~~~~l~~~~~~  288 (289)
                      |+|+.+      ++||+|||||||||++|||+||++++.++++++.+.+
T Consensus       430 Gvrv~~------~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~  472 (485)
T 3uw2_A          430 GLRVEY------PDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRR  472 (485)
T ss_dssp             SEEEEE------TTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred             eEEEEe------CCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHH
Confidence            999999      7899999999999999999999999999999988764
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 289
d1p5dx3109 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglu 8e-12
d1p5dx2104 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglu 9e-08
d1kfia2118 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphop 8e-05
d3pmga2113 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (O 0.001
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Length = 109 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.9 bits (142), Expect = 8e-12
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 52  GDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLN 111
            D+L+ L +  V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K     
Sbjct: 2   PDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETG 61

Query: 112 EDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMK 153
                  L  E SGH   KE +F  D        +++++   
Sbjct: 62  -----ALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQD 98
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Length = 104 Back     information, alignment and structure
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 118 Back     information, alignment and structure
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 113 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query289
d1p5dx3109 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.93
d3pmga3117 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.88
d1kfia3120 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.86
d1p5dx496 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.79
d1p5dx2104 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.47
d3pmga2113 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.41
d1wjwa_112 Phosphoacetylglucosamine mutase {Mouse (Mus muscul 99.33
d1kfia2118 Exocytosis-sensitive phosphoprotein, pp63/parafusi 98.84
d3pmga4141 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 97.58
d1kfia4129 Exocytosis-sensitive phosphoprotein, pp63/parafusi 97.37
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=6.5e-26  Score=175.62  Aligned_cols=108  Identities=24%  Similarity=0.457  Sum_probs=100.9

Q ss_pred             ChhHHHHHHHHHHHhhCCCCeEEEcccCCHHHHHHHHHcCCcEEEeecccHHHHHHHhhcccCCceeeEEeecccceecC
Q 022948           51 NGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALK  130 (289)
Q Consensus        51 ~~d~~~~Ll~~~~l~~~~~~~vv~t~~ss~~l~~~a~~~g~~v~~t~vG~k~i~~~~~~~~~~g~~~~~g~E~sg~~~~~  130 (289)
                      .||++++|+++++++++|+..||+|++||..++++++++|+++++|+||+++|.++|++.++     +||||+|||++|+
T Consensus         1 ~gD~il~lla~~~l~~~~~~~VV~~v~~s~~i~~~~~~~g~~~~~t~vG~~~v~~~m~~~~a-----~~GGE~SGh~~~~   75 (109)
T d1p5dx3           1 YPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGA-----LLAGEMSGHVFFK   75 (109)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTSCTHHHHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSBEEET
T ss_pred             CcHHHHHHHHHHHHHHCCCCeEEEeChhHhhHHHHHHHcCCccceecCChHHHHHHHhhcCC-----cEEecccceEEec
Confidence            48999999999999999988999999999999999999999999999999999999999874     7999999999999


Q ss_pred             CCcc-CCCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHc
Q 022948          131 ENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDL  168 (289)
Q Consensus       131 ~~~~-~~Dgi~a~l~ll~e~~~~~~~~~~~~l~~ll~~l  168 (289)
                      ++++ ++|||+++++++ ++++.    ++++|+|+++++
T Consensus        76 ~~~~~~~Dgi~~al~~l-e~l~~----~~~~lsel~~~f  109 (109)
T d1p5dx3          76 ERWFGFDDGIYSAARLL-EILSQ----DQRDSEHVFSAF  109 (109)
T ss_dssp             TTTCSSBCHHHHHHHHH-HHHHT----CSSCHHHHHHTS
T ss_pred             cCCCCCChHHHHHHHHH-HHHHH----cCCCHHHHHhcC
Confidence            9776 799999999876 99988    899999999864
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure