Citrus Sinensis ID: 023006

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRNVCSGHSTSSSGRMCCSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Secondary Structure (PSIPRED)
ccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHcHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHccccEEEEHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHccccccccccccccccHccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccEEEEccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccHHHcccEEEcccccHHHHHccccHHHEccccEEcc
Coil and Loop (DISEMBL)
MNSYFIFAMLqafdppldmsqdmdicedshvshthydnqsdgrnvcsghstsssgrmccskgdhadcneQSKVVETAKEMttneeeetegpieyktascpgklenreetnqscsndftdsngnasspacdwldpsiqlnvpladvdkvRCIIRNIVRDwaaegkterdqCYKPILEELDalfpnrskesppaclvpgaglGRLALEISHlgfisqgnEFSYYMMICSSFILNhtetagewniypwihsncnslsdsdqlrpvsipdihparysycctclfffsnsslai
Flexible Loop (DISEMBL)
MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHThydnqsdgrnVCSGHSTSSSGRMCCSKGDHADCNEQSKVVETAKemttneeeetegpieyktascpgklENREETNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVrdwaaegkterdqcYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Low Complexity Region (SEG)
MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRNVCSGHSTSSSGRMCCSKGDHADCNEQSKVVetakemttneeeetegpieYKTASCPGKLENREETNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Disordered region (IsUnstruct)
***YFIFAMLQAFD*****************************************************************************************************************ACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFP********ACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFS******
Disordered Region (DISOPRED)
*NSYFIFAMLQAFDPPLDMSQDMDI******************************RMCCSKGDHADCN********************************GKLENREETNQSCSNDFTDSNG************************KVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLA*
Disordered Region (DISEMBL)
MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRN**************CSKGDHADCNEQSKVVETA**************IEYKTASCPGKLENREETNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Disordered Region (DISPRO)
*NSYFIFAMLQAFDPPLDMSQDMDICEDSHVS***********N********************************************************************CSN**********************LNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRNVCSGHSTSSSGRMCCSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARYSYCCTCLFFFSNSSLAI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q5BJZ6	400	UPF0586 protein C9orf41 h	yes	no	0.435	0.315	0.472	2e-31
Q80UY1	400	UPF0586 protein C9orf41 h	yes	no	0.435	0.315	0.464	6e-31
Q8N4J0	409	UPF0586 protein C9orf41 O	yes	no	0.435	0.308	0.464	1e-30
Q54ST2	463	UPF0586 protein OS=Dictyo	yes	no	0.539	0.336	0.413	3e-29
Q9Y7J3	373	UPF0586 protein C1778.07	yes	no	0.522	0.404	0.424	1e-28
Q9I7X6	439	UPF0586 protein CG11596 O	yes	no	0.460	0.302	0.432	3e-28
P53934	400	UPF0586 protein YNL092W O	yes	no	0.404	0.292	0.357	1e-15

>sp|Q5BJZ6|CI041_RAT UPF0586 protein C9orf41 homolog OS=Rattus norvegicus PE=2 SV=1

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/127 (47%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
           D+DK++  ++  VRDW+  GK ERD CYKPI++E+   FP  R   S    LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSGTGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204

Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
           LA EI+ LG+  QGNE+S++M+  S+F+LN      ++ +YPWIH   N+   +DQ+RP+
Sbjct: 205 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEVDKYKLYPWIHQFSNNRRSADQIRPI 264

Query: 263 SIPDIHP 269
             PD+ P
Sbjct: 265 FFPDVDP 271

Rattus norvegicus (taxid: 10116)

>sp|Q80UY1|CI041_MOUSE UPF0586 protein C9orf41 homolog OS=Mus musculus PE=2 SV=1

 Score =  134 bits (338), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
           D+DK++  ++  VRDW+  GK ERD CYKPI++E+   FP  R   S    LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204

Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
           LA E++ LG+  QGNE+S++M+  S+F+LN      ++ +YPWIH   N+   +DQ+RP+
Sbjct: 205 LAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 264

Query: 263 SIPDIHP 269
             PD+ P
Sbjct: 265 LFPDVDP 271

Mus musculus (taxid: 10090)

>sp|Q8N4J0|CI041_HUMAN UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
           D+DK++  ++  VRDW+  GK ERD CY+PI++E+   FP  R   S    LVPGAGLGR
Sbjct: 154 DMDKLKSTLKQFVRDWSETGKAERDACYQPIIKEILKNFPKERWDPSKVNILVPGAGLGR 213

Query: 203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
           LA EI+ LG+  QGNE+S++M+  S+F+LN      ++ +YPWIH   N+   +DQ+RP+
Sbjct: 214 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 273

Query: 263 SIPDIHP 269
             PD+ P
Sbjct: 274 FFPDVDP 280

Homo sapiens (taxid: 9606)

>sp|Q54ST2|U586_DICDI UPF0586 protein OS=Dictyostelium discoideum GN=DDB_G0282239 PE=3 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 6/162 (3%)

Query: 110 NQSCSNDFTDSNGNASSPACDWLDPSI--QLNVPLADVDKVRCIIRNIVRDWAAEGKTER 167
           N+ C N F+ S+ N+++     +DP+    + +    +D+++  IR +VR+W+ EGK ER
Sbjct: 171 NEHC-NIFSQSSDNSANSE-RIVDPTNLDHIKIDYFMMDQLKSTIRQLVREWSEEGKLER 228

Query: 168 DQCYKPILEELDALFPN--RSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI 225
           DQ ++PI ++L  ++ +    + S      PGAGLGRL LEI+ LGF SQG E+S+ M+I
Sbjct: 229 DQAFEPIKQQLLEIYGHIPFQERSKIRVYSPGAGLGRLCLEIASLGFSSQGIEYSFMMLI 288

Query: 226 CSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267
            S+F+LN  E   E+ I+P+IH   N L D DQLR V+IPD+
Sbjct: 289 VSNFMLNKVEKINEFKIHPYIHQTVNVLRDIDQLRTVTIPDV 330

Dictyostelium discoideum (taxid: 44689)

>sp|Q9Y7J3|YOI7_SCHPO UPF0586 protein C1778.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1778.07 PE=3 SV=1

 Score =  127 bits (318), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 2/153 (1%)

Query: 122 GNASSPA-CDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDA 180
            NA+ P  C   D +   +V +  + KV   ++ I RDW+ E   ER   Y P +EEL++
Sbjct: 77  ANAAIPVFCSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNS 136

Query: 181 LFPNRS-KESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGE 239
           LFP+ S   S    LVPG+GLGRLA +I+  GF  QGNEFSY+M++ S FILN  +   +
Sbjct: 137 LFPSDSIDRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQ 196

Query: 240 WNIYPWIHSNCNSLSDSDQLRPVSIPDIHPARY 272
           + +YP+IHS  N +   DQ+R ++IPD  P++Y
Sbjct: 197 FLVYPYIHSFSNHVMRDDQVRSLNIPDAVPSQY 229

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9I7X6|U586_DROME UPF0586 protein CG11596 OS=Drosophila melanogaster GN=CG11596 PE=1 SV=1

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 86/134 (64%), Gaps = 1/134 (0%)

Query: 139 NVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE-SPPACLVPG 197
           NV   D+D+ +  ++ I RDW+ EG  ER+Q YKPI++ + A F +   E      LVPG
Sbjct: 119 NVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPG 178

Query: 198 AGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 257
           AGLGRL  E++ LG+  +GNEFSY+M+I S+F+LN  +   ++ +YPW+H   N+L   D
Sbjct: 179 AGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRRED 238

Query: 258 QLRPVSIPDIHPAR 271
           Q+ PV  PD+ P +
Sbjct: 239 QVAPVRFPDVCPLK 252

Drosophila melanogaster (taxid: 7227)

>sp|P53934|YNJ2_YEAST UPF0586 protein YNL092W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL092W PE=1 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 9/126 (7%)

Query: 144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPAC--LVPGAGLG 201
           D+ K   ++  + R+W+AE  +ER+ C          L P     SPP    L+PG G G
Sbjct: 98  DMSKTCSLLTQVYREWSAEAISERN-CLN------SRLVPFLKTLSPPKADILIPGCGTG 150

Query: 202 RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261
           RL +++S +G+  +GNEFSY+M++ S ++LN      +  IYP+IH   +     DQL P
Sbjct: 151 RLLVDLSRMGYNCEGNEFSYHMLLVSQYMLNAGLLQNQIIIYPFIHCFSHWKKIEDQLSP 210

Query: 262 VSIPDI 267
           + +PDI
Sbjct: 211 IKVPDI 216


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.131    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,877,976
Number of Sequences: 539616
Number of extensions: 4631669
Number of successful extensions: 11324
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 11201
Number of HSP's gapped (non-prelim): 125
length of query: 289
length of database: 191,569,459
effective HSP length: 116
effective length of query: 173
effective length of database: 128,974,003
effective search space: 22312502519
effective search space used: 22312502519
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
296089545	498	unnamed protein product [Vitis vinifera]	0.930	0.540	0.628	2e-93
356577478	627	PREDICTED: uncharacterized protein LOC10	0.927	0.427	0.645	2e-92
356551269	456	PREDICTED: UPF0586 protein C9orf41 homol	0.813	0.515	0.608	8e-86
449463611	492	PREDICTED: UPF0586 protein C9orf41 homol	0.899	0.528	0.631	2e-85
297822971	508	hypothetical protein ARALYDRAFT_902264 [	0.882	0.501	0.590	5e-80
30685202	504	N2227-like domain-containing protein [Ar	0.892	0.511	0.578	7e-79
224109542	356	predicted protein [Populus trichocarpa]	0.709	0.575	0.570	1e-74
224137440	356	predicted protein [Populus trichocarpa]	0.709	0.575	0.566	3e-74
218197084	494	hypothetical protein OsI_20588 [Oryza sa	0.899	0.526	0.539	4e-73
115464829	494	Os05g0511300 [Oryza sativa Japonica Grou	0.899	0.526	0.539	4e-73

>gi|296089545|emb|CBI39364.3| unnamed protein product [Vitis vinifera]

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/283 (62%), Positives = 207/283 (73%), Gaps = 14/283 (4%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDG-RNVCSGHSTSSSGRMCC 59
           +NS+FIF MLQAF+PPLDMSQD D+CE+ H+ +   D+   G RN+C   + S+SGR+  
Sbjct: 81  VNSFFIFNMLQAFEPPLDMSQDTDMCENPHLENALDDHLDSGERNICPCEAASTSGRISF 140

Query: 60  SKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSND--- 116
            + D A    +S +   + E   N+E  TE   E     C     N  ET+Q+ S+D   
Sbjct: 141 PQSDQASYG-KSDITCKSPEGVNNKELGTESCCESGPGICNAYPGNNRETDQAGSSDVKI 199

Query: 117 ---------FTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTER 167
                    F DSNGN SS   +WLDPS QLNVPL DVDKVRCIIRNIVRDWAAEG+ ER
Sbjct: 200 NNDEATPYSFADSNGNVSSSTHEWLDPSFQLNVPLVDVDKVRCIIRNIVRDWAAEGQKER 259

Query: 168 DQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS 227
           DQCYKPILEELD LFPNRSK+ PP+CLVPGAGLGRLALEIS LGFISQGNEFSYYMMICS
Sbjct: 260 DQCYKPILEELDGLFPNRSKDRPPSCLVPGAGLGRLALEISCLGFISQGNEFSYYMMICS 319

Query: 228 SFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           SFILN+ +TA EW IYPWIHSNCNSLS++DQLRPVSIPD+HPA
Sbjct: 320 SFILNNAQTAEEWTIYPWIHSNCNSLSENDQLRPVSIPDMHPA 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577478|ref|XP_003556852.1| PREDICTED: uncharacterized protein LOC100791662 [Glycine max]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/274 (64%), Positives = 205/274 (74%), Gaps = 6/274 (2%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQ-SDGRNVCSGHSTSSSGRMCC 59
           MN++FIF MLQAF+PPLDMSQD+D  ED H   T  D+  S+G + CS  S     R+ C
Sbjct: 215 MNTHFIFGMLQAFEPPLDMSQDVDFSEDPHPESTQKDHLVSEGISACSCESVPV--RITC 272

Query: 60  SKGDHADCNEQSK-VVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFT 118
           S  D   C E       +  +M +NEE + E   +  T S    + + +ET++ C +   
Sbjct: 273 SVSDQHRCVEGGNHTCISQAQMHSNEEVDIESCHQSNTGSHSPSMIHPKETSEYCGSPIA 332

Query: 119 DSNGNA--SSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILE 176
           DSNGN   +S    WLDPS++LNVPL DVDKVRCIIRNIVRDWAAEGK ERDQCY PIL+
Sbjct: 333 DSNGNVPVTSSQQQWLDPSLKLNVPLVDVDKVRCIIRNIVRDWAAEGKNERDQCYSPILD 392

Query: 177 ELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTET 236
           EL+ LFPNRSK+SPPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSSFILNH++T
Sbjct: 393 ELNMLFPNRSKDSPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNHSQT 452

Query: 237 AGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           AGEW IYPWIHSNCNSLSDSDQLRPVSIPD+HPA
Sbjct: 453 AGEWTIYPWIHSNCNSLSDSDQLRPVSIPDMHPA 486

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551269|ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [Glycine max]

 Score =  323 bits (827), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 168/276 (60%), Positives = 189/276 (68%), Gaps = 41/276 (14%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQ-SDGRNVCSGHSTSSSG---R 56
           MN++FIF+MLQAF+PPLDMSQD D  ED H      D+  S+G + CS  S    G   R
Sbjct: 75  MNTHFIFSMLQAFEPPLDMSQDADFSEDPHPESAQKDHLVSEGISACSCESAPEVGIESR 134

Query: 57  MCCSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSND 116
              + G+H+                                    +L + +ET + C + 
Sbjct: 135 HQSNTGNHSP-----------------------------------RLIHTKETREYCGSP 159

Query: 117 FTDSNGNA--SSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPI 174
             DS GN   +S    WL PS++LNVPL D DKVRCIIRNIVRDWAAEGK ERDQCY PI
Sbjct: 160 IADSKGNVPDTSSQQQWLAPSLKLNVPLVDADKVRCIIRNIVRDWAAEGKKERDQCYNPI 219

Query: 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHT 234
           LEEL+ LFPNRSKESPPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSSFILNH+
Sbjct: 220 LEELNMLFPNRSKESPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNHS 279

Query: 235 ETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           +TAGEW IYPWIHSNCNSLSDSDQLRPVSIPDIHPA
Sbjct: 280 QTAGEWTIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463611|ref|XP_004149525.1| PREDICTED: UPF0586 protein C9orf41 homolog [Cucumis sativus]

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/282 (63%), Positives = 203/282 (71%), Gaps = 22/282 (7%)

Query: 2   NSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDN-------QSDGR------NVCSG 48
           NSYFIF MLQAF+PPLDMSQD D C+ S+  H H D         ++G       NVCSG
Sbjct: 80  NSYFIFNMLQAFEPPLDMSQDTDCCDGSYPDHAHDDQFCCRGERNANGNLCSRESNVCSG 139

Query: 49  HSTSSSGRMCCSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREE 108
             TS+SGRMC  +     C E +   ++ K  T N+E E          +    LE +E 
Sbjct: 140 EPTSTSGRMCSLESKQICCPEGAS--DSPKASTINQEVEN-------GVNHDQHLEEKEV 190

Query: 109 TNQSCSNDFTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERD 168
           T++   +  +D NGN  S + +WLDPS+QLNVPL DVDKVRCIIRNIVRDWA EG+ ER+
Sbjct: 191 TDKHSGHCASDCNGNDCSSSHEWLDPSLQLNVPLVDVDKVRCIIRNIVRDWAEEGQKERE 250

Query: 169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228
           QCYKPILEEL +LFP+R KESPPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSS
Sbjct: 251 QCYKPILEELHSLFPDRKKESPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSS 310

Query: 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           FILNHT+  GEW IYPWIHSN NSLSDSDQLRPVSIPDIHPA
Sbjct: 311 FILNHTQKVGEWTIYPWIHSNSNSLSDSDQLRPVSIPDIHPA 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822971|ref|XP_002879368.1| hypothetical protein ARALYDRAFT_902264 [Arabidopsis lyrata subsp. lyrata] gi|297325207|gb|EFH55627.1| hypothetical protein ARALYDRAFT_902264 [Arabidopsis lyrata subsp. lyrata]

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 163/276 (59%), Positives = 194/276 (70%), Gaps = 21/276 (7%)

Query: 2   NSYFIFAMLQAFDPPLDMSQDMDICEDSHVS---HTHYDNQSDGRNVCSGHSTSSSGRMC 58
           NSYFIF MLQAF+PP+D+SQ++D CEDS++    H  Y       + C    T+S    C
Sbjct: 110 NSYFIFNMLQAFEPPIDLSQELDGCEDSNLECAPHERYTLDERHDSSCQPALTNS----C 165

Query: 59  CSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSND-- 116
             K       E+SK +       + EE + +   E    S      +   TN++C  D  
Sbjct: 166 TYK-------EESKHIREPITGVSIEELQRK---EAHDHSSKDDSADARITNKTCECDGG 215

Query: 117 -FTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPIL 175
                +G+ S  + DWLD S+Q +VPL DVDKVRCIIRNIVRDWAAEG+ ERDQCYKPIL
Sbjct: 216 QLNHDHGSVSFSSHDWLDSSLQTHVPLVDVDKVRCIIRNIVRDWAAEGQRERDQCYKPIL 275

Query: 176 EELDALFPNRSKES-PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHT 234
           EELD+LFP+RSKES PPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSSFILN++
Sbjct: 276 EELDSLFPDRSKESTPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNYS 335

Query: 235 ETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           +  GEW IYPWIHSNCNSLSD+DQLRP++IPDIHPA
Sbjct: 336 QVPGEWTIYPWIHSNCNSLSDNDQLRPIAIPDIHPA 371

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685202|ref|NP_850185.1| N2227-like domain-containing protein [Arabidopsis thaliana] gi|20259498|gb|AAM13869.1| unknown protein [Arabidopsis thaliana] gi|22136766|gb|AAM91702.1| unknown protein [Arabidopsis thaliana] gi|330253550|gb|AEC08644.1| N2227-like domain-containing protein [Arabidopsis thaliana]

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 158/273 (57%), Positives = 189/273 (69%), Gaps = 15/273 (5%)

Query: 2   NSYFIFAMLQAFDPPLDMSQDMDICEDSHVS---HTHYDNQSDGRNVCSGHSTSSSGRMC 58
           NSYFIF MLQAF+PP+D+SQ++D CEDS++    H  Y       + C    T+S    C
Sbjct: 105 NSYFIFNMLQAFEPPIDLSQELDGCEDSNLDCAPHERYTLDERHDSSCQPALTNS----C 160

Query: 59  CSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFT 118
             K       E+SK +       + EE + +   ++            ++T         
Sbjct: 161 TYK-------EESKHIRDPITGVSIEELQRKEAHDHSPKDDSADTRINDKTCDCHEGQLN 213

Query: 119 DSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEEL 178
             +G+ S  + DWLD S+Q +VPL DVDKVRCIIRNIVRDWAAEG+ ERDQCYKPILEEL
Sbjct: 214 HDHGSVSFSSHDWLDSSLQTHVPLVDVDKVRCIIRNIVRDWAAEGQRERDQCYKPILEEL 273

Query: 179 DALFPNRSKES-PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETA 237
           D+LFP+R KES PPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSSFILN+T+  
Sbjct: 274 DSLFPDRLKESTPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNYTQVP 333

Query: 238 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           GEW IYPWIHSNCNSLSD+DQLRP++IPDIHPA
Sbjct: 334 GEWTIYPWIHSNCNSLSDNDQLRPIAIPDIHPA 366

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109542|ref|XP_002333240.1| predicted protein [Populus trichocarpa] gi|222835802|gb|EEE74237.1| predicted protein [Populus trichocarpa]

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/270 (57%), Positives = 174/270 (64%), Gaps = 65/270 (24%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRNVCSGHSTSSSGRMCCS 60
           +NSYFIF MLQAF+PPLDMSQD+D   DS     H++   +  NVCS  ST++       
Sbjct: 74  INSYFIFNMLQAFEPPLDMSQDID---DS--GELHFEWPPNDGNVCSHESTTAR------ 122

Query: 61  KGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFTDS 120
                                                   G  EN + T + C N  +DS
Sbjct: 123 ----------------------------------------GSEENNKMTAECCGNHVSDS 142

Query: 121 NGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDA 180
           NGN              L+VPL DVDKVRCI+RNIVRDWAAEG+ ERDQCYKPILEEL++
Sbjct: 143 NGN--------------LHVPLVDVDKVRCILRNIVRDWAAEGQKERDQCYKPILEELNS 188

Query: 181 LFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEW 240
           LFP+R  +SPP CLVPGAGLGRLALEIS LGF+SQGNEFSYYMMICSSFILN T+ AGEW
Sbjct: 189 LFPSRCNKSPPTCLVPGAGLGRLALEISCLGFVSQGNEFSYYMMICSSFILNQTQNAGEW 248

Query: 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
            IYPWIHSNCNSLSDSDQLRPVS PDIHPA
Sbjct: 249 TIYPWIHSNCNSLSDSDQLRPVSFPDIHPA 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137440|ref|XP_002322558.1| predicted protein [Populus trichocarpa] gi|224137448|ref|XP_002322560.1| predicted protein [Populus trichocarpa] gi|222867188|gb|EEF04319.1| predicted protein [Populus trichocarpa] gi|222867190|gb|EEF04321.1| predicted protein [Populus trichocarpa]

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/270 (56%), Positives = 173/270 (64%), Gaps = 65/270 (24%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDICEDSHVSHTHYDNQSDGRNVCSGHSTSSSGRMCCS 60
           +NSYFIF MLQAF+PPLDMSQD+D   DS     H++   +  NVCS  ST++       
Sbjct: 74  INSYFIFNMLQAFEPPLDMSQDID---DS--GELHFEWPPNDGNVCSHESTTAR------ 122

Query: 61  KGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETNQSCSNDFTDS 120
                                                   G  EN + T + C N  +DS
Sbjct: 123 ----------------------------------------GSEENNKMTAECCGNHVSDS 142

Query: 121 NGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDA 180
           NGN              L+VPL DVDKVRCI+RNIVRDWAAEG+ ERDQCYKPILEEL++
Sbjct: 143 NGN--------------LHVPLVDVDKVRCILRNIVRDWAAEGQKERDQCYKPILEELNS 188

Query: 181 LFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEW 240
           LFP+R  +SPP CLVPGAG GRLALEIS LGF+SQGNEFSYYMMICSSFILN T+ AGEW
Sbjct: 189 LFPSRCNKSPPTCLVPGAGFGRLALEISCLGFVSQGNEFSYYMMICSSFILNQTQNAGEW 248

Query: 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
            IYPWIHSNCNSLSDSDQLRPVS PDIHPA
Sbjct: 249 TIYPWIHSNCNSLSDSDQLRPVSFPDIHPA 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218197084|gb|EEC79511.1| hypothetical protein OsI_20588 [Oryza sativa Indica Group]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/293 (53%), Positives = 189/293 (64%), Gaps = 33/293 (11%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDI----CEDSHVSHTHYD-NQSDGRNVCSGHSTSSSG 55
           MN+ FI  ML+AF+PP DMSQ +D+    C ++   H H D   S  R  C   S S S 
Sbjct: 70  MNASFIMDMLEAFEPPFDMSQHIDMDGHDCAENMHGHCHADCAHSVDRGDCFRSSISVSN 129

Query: 56  RMC-----CSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETN 110
                   C + D        K  E ++E T N++E  +  +E  +     KL   +  +
Sbjct: 130 SELHEPDGCPRKD-------DKTHELSRE-TDNKDEVVD--MESCSRPVGDKLGASQVED 179

Query: 111 QSCSND-FTDSNGNASSPAC------------DWLDPSIQLNVPLADVDKVRCIIRNIVR 157
           +SC+ D   D+  N     C             ++ PS+QLNVP  DVDKVRCIIRNIVR
Sbjct: 180 KSCNGDKAMDAAANCQDTDCVACSADENVIPQQFMAPSLQLNVPPIDVDKVRCIIRNIVR 239

Query: 158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGN 217
           DWA EG+ ERD+CYKPILEEL+ LFPNRSKE PP+CLVPGAGLGRLALEIS LGF+SQGN
Sbjct: 240 DWAQEGQKERDECYKPILEELNRLFPNRSKERPPSCLVPGAGLGRLALEISTLGFVSQGN 299

Query: 218 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           EFSYYMMICSSFILNHT+   EW IYPWIHSNCNSLSD+DQLRPVS PDIHP+
Sbjct: 300 EFSYYMMICSSFILNHTQETNEWTIYPWIHSNCNSLSDNDQLRPVSFPDIHPS 352

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115464829|ref|NP_001056014.1| Os05g0511300 [Oryza sativa Japonica Group] gi|48475071|gb|AAT44140.1| unknown protein [Oryza sativa Japonica Group] gi|113579565|dbj|BAF17928.1| Os05g0511300 [Oryza sativa Japonica Group] gi|215697939|dbj|BAG92145.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/293 (53%), Positives = 189/293 (64%), Gaps = 33/293 (11%)

Query: 1   MNSYFIFAMLQAFDPPLDMSQDMDI----CEDSHVSHTHYD-NQSDGRNVCSGHSTSSSG 55
           MN+ FI  ML+AF+PP DMSQ +D+    C ++   H H D   S  R  C   S S S 
Sbjct: 70  MNASFIMDMLEAFEPPFDMSQHVDMDGHDCAENMHGHCHADCAHSVDRGDCFRSSISVSN 129

Query: 56  RMC-----CSKGDHADCNEQSKVVETAKEMTTNEEEETEGPIEYKTASCPGKLENREETN 110
                   C + D        K  E ++E T N++E  +  +E  +     KL   +  +
Sbjct: 130 SELHEPDGCPRKD-------DKTHELSRE-TDNKDEVVD--MESCSRPVGDKLGASQVED 179

Query: 111 QSCSND-FTDSNGNASSPAC------------DWLDPSIQLNVPLADVDKVRCIIRNIVR 157
           +SC+ D   D+  N     C             ++ PS+QLNVP  DVDKVRCIIRNIVR
Sbjct: 180 KSCNGDKAMDAAANCQDTDCVACSADENVIPQQFMAPSLQLNVPPIDVDKVRCIIRNIVR 239

Query: 158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGN 217
           DWA EG+ ERD+CYKPILEEL+ LFPNRSKE PP+CLVPGAGLGRLALEIS LGF+SQGN
Sbjct: 240 DWAQEGQKERDECYKPILEELNRLFPNRSKERPPSCLVPGAGLGRLALEISTLGFVSQGN 299

Query: 218 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
           EFSYYMMICSSFILNHT+   EW IYPWIHSNCNSLSD+DQLRPVS PDIHP+
Sbjct: 300 EFSYYMMICSSFILNHTQETNEWTIYPWIHSNCNSLSDNDQLRPVSFPDIHPS 352

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
TAIR|locus:2045542	571	AT2G32170 [Arabidopsis thalian	0.283	0.143	0.878	1.8e-73
TAIR|locus:2045547	463	AT2G32160 "AT2G32160" [Arabido	0.581	0.362	0.689	2.3e-68
ZFIN|ZDB-GENE-050306-48	373	zgc:112985 "zgc:112985" [Danio	0.435	0.337	0.511	3.2e-33
MGI|MGI:1914633	400	2410127L17Rik "RIKEN cDNA 2410	0.435	0.315	0.464	4.9e-30
ASPGD|ASPL0000056516	418	AN0865 [Emericella nidulans (t	0.442	0.306	0.496	7.9e-30
FB|FBgn0023522	439	CG11596 [Drosophila melanogast	0.460	0.302	0.432	6.4e-28
DICTYBASE|DDB_G0282239	463	DDB_G0282239 "N2227-like domai	0.539	0.336	0.413	1.8e-27
POMBASE|SPBC1778.07	373	SPBC1778.07 "methyltransferase	0.519	0.402	0.427	2.8e-27
UNIPROTKB|G4MPS8	418	MGG_09217 "Uncharacterized pro	0.439	0.303	0.407	7.7e-25
CGD|CAL0000364	395	orf19.592 [Candida albicans (t	0.397	0.291	0.382	4.4e-20

TAIR|locus:2045542 AT2G32170 [Arabidopsis thaliana (taxid:3702)]

 Score = 403 (146.9 bits), Expect = 1.8e-73, Sum P(3) = 1.8e-73
 Identities = 72/82 (87%), Positives = 78/82 (95%)

Query:   189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248
             +PPACLVPGAGLGRLALEIS LGFISQGNEFSYYMMICSSFILN+T+  GEW IYPWIHS
Sbjct:   352 TPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILNYTQVPGEWTIYPWIHS 411

Query:   249 NCNSLSDSDQLRPVSIPDIHPA 270
             NCNSLSD+DQLRP++IPDIHPA
Sbjct:   412 NCNSLSDNDQLRPIAIPDIHPA 433

GO:0005634 "nucleus" evidence=ISM

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

TAIR|locus:2045547 AT2G32160 "AT2G32160" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
 Identities = 120/174 (68%), Positives = 139/174 (79%)

Query:   103 LENREE--TNQSCSND---FTDSNGNASSPACDWLDPSIQLNVPLADVDKVRCIIRNIVR 157
             L+N E    N++C  D       +G+    + DWLD S+Q +VPL DV+KVR +IRNIVR
Sbjct:   152 LKNAEIRLNNKTCEFDGGHLNHDHGSVPFSSHDWLDSSLQAHVPLVDVNKVRWVIRNIVR 211

Query:   158 DWAAEGKTERDQCYKPILEELDALFPNRSKESP-PACLVPGAGLGRLALEISHLGFISQG 216
             DW AEG+ ERD+CYKPILEELD+LFP+R KES  PACLVPGAGLGRLALEIS LGF SQG
Sbjct:   212 DWGAEGQRERDECYKPILEELDSLFPDRHKESTRPACLVPGAGLGRLALEISCLGFRSQG 271

Query:   217 NEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270
             NE SYYMM+CSSFILN+T+  GEW IYPWIH+NCNSLSD DQLRP+SIPDIHPA
Sbjct:   272 NEVSYYMMLCSSFILNYTQLPGEWTIYPWIHTNCNSLSDDDQLRPISIPDIHPA 325

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050306-48 zgc:112985 "zgc:112985" [Danio rerio (taxid:7955)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 65/127 (51%), Positives = 89/127 (70%)

Query:   144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFP-NRSKESPPACLVPGAGLGR 202
             D+DK++  I+  VRDW+  GK ERD CYKPI++E+  LFP ++   S    LVPGAGLGR
Sbjct:   117 DMDKLKSTIKQFVRDWSEAGKAERDSCYKPIIDEIQRLFPPDQCDVSQVRVLVPGAGLGR 176

Query:   203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
             LA EI+HLG+  QGNE+S++M+  S+F+LN  +      +YPWIH   N+ + SDQ RPV
Sbjct:   177 LAWEIAHLGYSCQGNEWSFFMLFSSNFVLNRCDKENALTLYPWIHQFSNNKASSDQTRPV 236

Query:   263 SIPDIHP 269
             S PD++P
Sbjct:   237 SFPDVNP 243

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1914633 2410127L17Rik "RIKEN cDNA 2410127L17 gene" [Mus musculus (taxid:10090)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 59/127 (46%), Positives = 85/127 (66%)

Query:   144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 202
             D+DK++  ++  VRDW+  GK ERD CYKPI++E+   FP  R   S    LVPGAGLGR
Sbjct:   145 DMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204

Query:   203 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 262
             LA E++ LG+  QGNE+S++M+  S+F+LN      ++ +YPWIH   N+   +DQ+RP+
Sbjct:   205 LAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 264

Query:   263 SIPDIHP 269
               PD+ P
Sbjct:   265 LFPDVDP 271

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000056516 AN0865 [Emericella nidulans (taxid:162425)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 64/129 (49%), Positives = 84/129 (65%)

Query:   143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNR-SKESPPACLVPGAGLG 201
             AD++K    IR   RDW+AEG+ ER+ CY P+L +LD  FP++  +E     LVPGAGLG
Sbjct:   126 ADINKAHSTIRQFYRDWSAEGQAEREACYIPVLRDLDLEFPDKLEREEFVKVLVPGAGLG 185

Query:   202 RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261
             RL  EI   GF ++GNE SY+ ++ SS++LNHTE A    +YP+     N LS   QLR 
Sbjct:   186 RLVFEICRAGFAAEGNEISYHQLLASSWVLNHTEGAQRHALYPFALHFSNILSREQQLRK 245

Query:   262 VSIPDIHPA 270
             V IPD+HPA
Sbjct:   246 VMIPDVHPA 254

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

FB|FBgn0023522 CG11596 [Drosophila melanogaster (taxid:7227)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 58/134 (43%), Positives = 86/134 (64%)

Query:   139 NVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPA-CLVPG 197
             NV   D+D+ +  ++ I RDW+ EG  ER+Q YKPI++ + A F +   E      LVPG
Sbjct:   119 NVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPG 178

Query:   198 AGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 257
             AGLGRL  E++ LG+  +GNEFSY+M+I S+F+LN  +   ++ +YPW+H   N+L   D
Sbjct:   179 AGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRRED 238

Query:   258 QLRPVSIPDIHPAR 271
             Q+ PV  PD+ P +
Sbjct:   239 QVAPVRFPDVCPLK 252

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0282239 DDB_G0282239 "N2227-like domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 309 (113.8 bits), Expect = 1.8e-27, P = 1.8e-27
 Identities = 67/162 (41%), Positives = 103/162 (63%)

Query:   110 NQSCSNDFTDSNGNASSPACDWLDPSI--QLNVPLADVDKVRCIIRNIVRDWAAEGKTER 167
             N+ C N F+ S+ N+++     +DP+    + +    +D+++  IR +VR+W+ EGK ER
Sbjct:   171 NEHC-NIFSQSSDNSANSE-RIVDPTNLDHIKIDYFMMDQLKSTIRQLVREWSEEGKLER 228

Query:   168 DQCYKPILEELDALFPNR--SKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI 225
             DQ ++PI ++L  ++ +    + S      PGAGLGRL LEI+ LGF SQG E+S+ M+I
Sbjct:   229 DQAFEPIKQQLLEIYGHIPFQERSKIRVYSPGAGLGRLCLEIASLGFSSQGIEYSFMMLI 288

Query:   226 CSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267
              S+F+LN  E   E+ I+P+IH   N L D DQLR V+IPD+
Sbjct:   289 VSNFMLNKVEKINEFKIHPYIHQTVNVLRDIDQLRTVTIPDV 330

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

POMBASE|SPBC1778.07 SPBC1778.07 "methyltransferase N2227 family" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 65/152 (42%), Positives = 95/152 (62%)

Query:   123 NASSPA-CDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDAL 181
             NA+ P  C   D +   +V +  + KV   ++ I RDW+ E   ER   Y P +EEL++L
Sbjct:    78 NAAIPVFCSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNSL 137

Query:   182 FPNRSKE-SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEW 240
             FP+ S + S    LVPG+GLGRLA +I+  GF  QGNEFSY+M++ S FILN  +   ++
Sbjct:   138 FPSDSIDRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQF 197

Query:   241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPARY 272
              +YP+IHS  N +   DQ+R ++IPD  P++Y
Sbjct:   198 LVYPYIHSFSNHVMRDDQVRSLNIPDAVPSQY 229

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISO

UNIPROTKB|G4MPS8 MGG_09217 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 283 (104.7 bits), Expect = 7.7e-25, P = 7.7e-25
 Identities = 57/140 (40%), Positives = 83/140 (59%)

Query:   144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE----SPPA------- 192
             D+DK R  +R   RDW+AEG+ ER+  Y P+ + L  +   R +E    SPP+       
Sbjct:   113 DIDKARSTLRQFYRDWSAEGRPEREASYGPVKQYLQHMEQVRIQEWFGPSPPSPLPSLPP 172

Query:   193 --CLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250
                LVPGAGLGRL  ++  LG+  +GNE SY+ ++ SS++LN    A +  IYPW+ S  
Sbjct:   173 LKVLVPGAGLGRLVFDLCDLGYEVEGNEISYHQLLASSYVLNRAPAARQHTIYPWVQSFS 232

Query:   251 NSLSDSDQLRPVSIPDIHPA 270
             N  S ++Q R  ++PD+HPA
Sbjct:   233 NHASRANQFRSYAVPDVHPA 252

GO:0005634 "nucleus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

CGD|CAL0000364 orf19.592 [Candida albicans (taxid:5476)]

 Score = 241 (89.9 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/115 (38%), Positives = 73/115 (63%)

Query:   155 IVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFIS 214
             ++R+W+ EG+ ERD  +  I+ EL+ L+P+         L PG GLGRL +E+   GF +
Sbjct:   107 LMREWSDEGQAERDVAFTRIISELEELYPDEPSRQSIRILNPGCGLGRLVMELVIRGFWT 166

Query:   215 QGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269
             QGNE SY+M++ S+FILNH++     +I+P++  + + +    Q R ++IPD+ P
Sbjct:   167 QGNEISYHMLLASNFILNHSQFPHSHSIFPFLSRSSHLVKRKYQTRGITIPDVAP 221

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00001792001	SubName- Full=Chromosome chr18 scaffold_122, whole genome shotgun sequence; (513 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00000534001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (338 aa)				•	•				0.437

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
pfam07942	268	pfam07942, N2227, N2227-like protein	1e-69

>gnl|CDD|219653 pfam07942, N2227, N2227-like protein

 Score =  216 bits (551), Expect = 1e-69
 Identities = 79/138 (57%), Positives = 101/138 (73%), Gaps = 1/138 (0%)

Query: 134 PSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE-SPPA 192
           P   +NV   D+ KVR  +R IVRDW+AEG+ ERD  YKPI+EEL+ LFP+RS + S   
Sbjct: 1   PHEPVNVSRGDMSKVRSTLRQIVRDWSAEGQVERDPLYKPIIEELNRLFPSRSHDRSKIR 60

Query: 193 CLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252
            LVPGAGLGRLA E++ LG+  QGNEFSY+M++CS+FILN+ +   +  IYP+IHS  N 
Sbjct: 61  ILVPGAGLGRLAYELATLGYQVQGNEFSYFMLLCSNFILNYCKEENQITIYPFIHSFSNQ 120

Query: 253 LSDSDQLRPVSIPDIHPA 270
           L+  DQLRPV IPD+HP 
Sbjct: 121 LTRDDQLRPVQIPDVHPL 138

This family features sequences that are similar to a region of hypothetical yeast gene product N2227. This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
PF07942	270	N2227: N2227-like protein; InterPro: IPR012901 Thi	100.0
KOG2798	369	consensus Putative trehalase [Carbohydrate transpo	100.0
PRK13256	226	thiopurine S-methyltransferase; Reviewed	97.8
PRK13255	218	thiopurine S-methyltransferase; Reviewed	97.78
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	97.71
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	97.66
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	97.09
PRK11207	197	tellurite resistance protein TehB; Provisional	97.09
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.8
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.51
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	96.38
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.09
PF13489	161	Methyltransf_23: Methyltransferase domain; PDB: 3J	95.92
PRK12335	287	tellurite resistance protein TehB; Provisional	95.87
PRK07580	230	Mg-protoporphyrin IX methyl transferase; Validated	95.71
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	95.65
TIGR02021	219	BchM-ChlM magnesium protoporphyrin O-methyltransfe	95.56
PLN02585	315	magnesium protoporphyrin IX methyltransferase	95.44
PRK14967	223	putative methyltransferase; Provisional	94.72
TIGR00740	239	methyltransferase, putative. A simple BLAST search	94.26
PRK14968	188	putative methyltransferase; Provisional	94.06
PLN02244	340	tocopherol O-methyltransferase	94.05
TIGR03587	204	Pse_Me-ase pseudaminic acid biosynthesis-associate	93.98
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	93.9
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	93.78
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	93.64
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.54
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	93.45
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	93.42
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	93.41
TIGR00452	314	methyltransferase, putative. Known examples to dat	93.01
smart00650	169	rADc Ribosomal RNA adenine dimethylases.	92.99
PRK04148	134	hypothetical protein; Provisional	92.98
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	92.9
PRK00274	272	ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1	92.88
TIGR02072	240	BioC biotin biosynthesis protein BioC. This enzyme	92.86
PLN02233	261	ubiquinone biosynthesis methyltransferase	92.29
TIGR01177	329	conserved hypothetical protein TIGR01177. This fam	92.21
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	92.02
PRK05785	226	hypothetical protein; Provisional	91.92
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	91.9
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	91.7
TIGR01983	224	UbiG ubiquinone biosynthesis O-methyltransferase.	91.45
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	91.41
TIGR03534	251	RF_mod_PrmC protein-(glutamine-N5) methyltransfera	91.38
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	91.28
TIGR03438	301	probable methyltransferase. This model represents	91.26
PRK14896	258	ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1	91.19
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	90.98
PRK03522	315	rumB 23S rRNA methyluridine methyltransferase; Rev	90.82
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	90.47
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	90.42
PLN02336	475	phosphoethanolamine N-methyltransferase	89.85
KOG1271	227	consensus Methyltransferases [General function pre	89.52
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	89.0
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	88.93
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	88.83
cd02440	107	AdoMet_MTases S-adenosylmethionine-dependent methy	88.7
PF08242	99	Methyltransf_12: Methyltransferase domain; InterPr	87.72
PRK10742	250	putative methyltransferase; Provisional	87.55
smart00138	264	MeTrc Methyltransferase, chemotaxis proteins. Meth	86.93
TIGR03533	284	L3_gln_methyl protein-(glutamine-N5) methyltransfe	86.46
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	86.37
PRK06202	232	hypothetical protein; Provisional	86.24
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	86.05
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	85.57
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	85.29
PF05175	170	MTS: Methyltransferase small domain; InterPro: IPR	85.12
PRK07402	196	precorrin-6B methylase; Provisional	84.96
TIGR00479	431	rumA 23S rRNA (uracil-5-)-methyltransferase RumA.	84.78
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	84.72
TIGR00755	253	ksgA dimethyladenosine transferase. Alternate name	84.5
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	84.39
PF05185	448	PRMT5: PRMT5 arginine-N-methyltransferase; InterPr	83.68
smart00828	224	PKS_MT Methyltransferase in polyketide synthase (P	83.64
PRK09328	275	N5-glutamine S-adenosyl-L-methionine-dependent met	83.43
TIGR02081	194	metW methionine biosynthesis protein MetW. This pr	82.76
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	81.61
PRK11805	307	N5-glutamine S-adenosyl-L-methionine-dependent met	81.08
TIGR00091	194	tRNA (guanine-N(7)-)-methyltransferase. In E. coli	80.67
PRK00811	283	spermidine synthase; Provisional	80.05

>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT)

Probab=100.00  E-value=9.9e-52  Score=382.26  Aligned_cols=136  Identities=54%  Similarity=1.039  Sum_probs=128.8

Q ss_pred             CCCCCcccCCCCCCchHHHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCC-CCCCCCCeEEecCCCchhhHHHHH
Q 023006          130 DWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGRLALEIS  208 (289)
Q Consensus       130 ~w~~ps~~~~v~~~D~dKV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~-~~~r~~~rVLVPGsGLGRLA~EIA  208 (289)
                      +|..++.      .|++||+++|+||+||||+||+.||+++|+||+++|++++|. ...+++++||||||||||||||||
T Consensus         2 ~~~~~~~------~d~~kV~s~L~q~~RDWS~eg~~ER~~~~~~I~~~L~~~~p~~~~~~~~~~VLVPGsGLGRLa~Eia   75 (270)
T PF07942_consen    2 EWVHPSP------SDMDKVRSTLKQFVRDWSSEGEEERDPCYSPILDELESLFPPAGSDRSKIRVLVPGSGLGRLAWEIA   75 (270)
T ss_pred             CcccCch------hhHHHHHHHHHHHHhhCchhhHHHHHHHHHHHHHHHHHhhcccccCCCccEEEEcCCCcchHHHHHh
Confidence            4555554      999999999999999999999999999999999999999995 455789999999999999999999


Q ss_pred             hhCCeeeeechhHHHHHHHHHHhhccCCCCceEEeecccccCCcCCccCCccceecCCCCCCC
Q 023006          209 HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAR  271 (289)
Q Consensus       209 ~~Gf~vqgNEfSy~MLLaS~FILN~~~~~~~~tIyPFihs~SN~~s~edQLR~V~IPDv~P~~  271 (289)
                      ++||.||||||||+||++|+||||++.+.++++||||+|++||+.++++|||+|+|||+.|..
T Consensus        76 ~~G~~~~gnE~S~~Mll~s~fiLn~~~~~~~~~I~Pf~~~~sn~~~~~dqlr~v~iPDv~p~~  138 (270)
T PF07942_consen   76 KLGYAVQGNEFSYFMLLASNFILNHCSQPNQFTIYPFVHSFSNQKSREDQLRPVRIPDVDPSS  138 (270)
T ss_pred             hccceEEEEEchHHHHHHHHHHHcccCCCCcEEEecceecccCCCCHHHhCCceEeCCcCccc
Confidence            999999999999999999999999999999999999999999999999999999999999976

This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].

>KOG2798 consensus Putative trehalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-49  Score=375.80  Aligned_cols=156  Identities=51%  Similarity=0.901  Sum_probs=141.4

Q ss_pred             cchhhhhccccccccccCCCCCCCCCCCCCCc-ccCCCCCCchHHHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhC
Q 023006          104 ENREETNQSCSNDFTDSNGNASSPACDWLDPS-IQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALF  182 (289)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ps-~~~~v~~~D~dKV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~f  182 (289)
                      ++.+++++-+...+..++           .-+ ...+|.+.+|.||.++|+|++||||+||..||+++|+|||++|..+|
T Consensus        74 ~v~r~Ia~~~~~~f~ed~-----------~~~~~~~~~n~~~m~kv~s~l~~i~RdwssE~~~ERd~~ykpii~~l~~lf  142 (369)
T KOG2798|consen   74 RVIRAIAEECPFEFTEDH-----------DQKGELAQVNPDFMSKVSSTLKQICRDWSSEGQRERDQLYKPIIEELNSLF  142 (369)
T ss_pred             HHHHHHHhhCccccchhh-----------hcccceecCCHHHHHHHHHHHHHHHHHhhhccchhhhhhhhhHHHHHHhhC
Confidence            456667665555554433           333 56778889999999999999999999999999999999999999999


Q ss_pred             CCC-CCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhhccCCCCceEEeecccccCCcCCccCCccc
Q 023006          183 PNR-SKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP  261 (289)
Q Consensus       183 P~~-~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN~~~~~~~~tIyPFihs~SN~~s~edQLR~  261 (289)
                      |.+ ..|.+++||||||||||||+|||++||.+|||||||||||||.||||.+..+++|+||||||++||+++++|||||
T Consensus       143 p~~~~~r~ki~iLvPGaGlGRLa~dla~~G~~~qGNEfSy~Mli~S~FiLN~~~~~nq~~IYPfIh~~sn~~~~dDQlrp  222 (369)
T KOG2798|consen  143 PSRGKERTKIRILVPGAGLGRLAYDLACLGFKCQGNEFSYFMLICSSFILNYCKQENQFTIYPFIHQYSNSLSRDDQLRP  222 (369)
T ss_pred             CCccccccCceEEecCCCchhHHHHHHHhcccccccHHHHHHHHHHHHHHHhhccCCcEEEEeeeecccccccccccccc
Confidence            975 4578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCCC
Q 023006          262 VSIPDIHPA  270 (289)
Q Consensus       262 V~IPDv~P~  270 (289)
                      |+|||++|.
T Consensus       223 i~~PD~~p~  231 (369)
T KOG2798|consen  223 ISIPDIHPA  231 (369)
T ss_pred             ccCcccccc
Confidence            999999998

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=97.80  E-value=1.9e-05  Score=72.37  Aligned_cols=50  Identities=22%  Similarity=0.266  Sum_probs=40.0

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      ..+.+.+.++-+.    ...+|||||||.||-+.-||.+||.|.|.|+|-.-+-
T Consensus        30 p~L~~~~~~l~~~----~~~rvLvPgCGkg~D~~~LA~~G~~V~GvDlS~~Ai~   79 (226)
T PRK13256         30 EFLVKHFSKLNIN----DSSVCLIPMCGCSIDMLFFLSKGVKVIGIELSEKAVL   79 (226)
T ss_pred             HHHHHHHHhcCCC----CCCeEEEeCCCChHHHHHHHhCCCcEEEEecCHHHHH
Confidence            4455666664322    3459999999999999999999999999999987654

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=97.78  E-value=2.2e-05  Score=70.66  Aligned_cols=52  Identities=21%  Similarity=0.098  Sum_probs=41.0

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      ....+.+.+.+..+    ....+||+||||.||-+.-||.+||.|+|.|+|--.+-
T Consensus        22 p~~~L~~~~~~~~~----~~~~rvL~~gCG~G~da~~LA~~G~~V~avD~s~~Ai~   73 (218)
T PRK13255         22 VNPLLQKYWPALAL----PAGSRVLVPLCGKSLDMLWLAEQGHEVLGVELSELAVE   73 (218)
T ss_pred             CCHHHHHHHHhhCC----CCCCeEEEeCCCChHhHHHHHhCCCeEEEEccCHHHHH
Confidence            44566666655322    12459999999999999999999999999999987665

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=97.71  E-value=6.5e-05  Score=67.38  Aligned_cols=36  Identities=19%  Similarity=0.099  Sum_probs=33.9

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      .-+||+||||.||-|.-||.+||.|+|.|+|--++-
T Consensus        35 ~~rvLd~GCG~G~da~~LA~~G~~V~gvD~S~~Ai~   70 (213)
T TIGR03840        35 GARVFVPLCGKSLDLAWLAEQGHRVLGVELSEIAVE   70 (213)
T ss_pred             CCeEEEeCCCchhHHHHHHhCCCeEEEEeCCHHHHH
Confidence            359999999999999999999999999999999887

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=97.66  E-value=1.8e-05  Score=71.44  Aligned_cols=50  Identities=28%  Similarity=0.333  Sum_probs=38.4

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      ..+.+.+.+. +   ...+.+|||||||.|.-+.-||.+||.|.|.|+|-.-+-
T Consensus        24 p~L~~~~~~l-~---~~~~~rvLvPgCG~g~D~~~La~~G~~VvGvDls~~Ai~   73 (218)
T PF05724_consen   24 PALVEYLDSL-A---LKPGGRVLVPGCGKGYDMLWLAEQGHDVVGVDLSPTAIE   73 (218)
T ss_dssp             HHHHHHHHHH-T---TSTSEEEEETTTTTSCHHHHHHHTTEEEEEEES-HHHHH
T ss_pred             HHHHHHHHhc-C---CCCCCeEEEeCCCChHHHHHHHHCCCeEEEEecCHHHHH
Confidence            4555555552 1   124568999999999999999999999999999987654

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>TIGR00477 tehB tellurite resistance protein TehB

Probab=97.09  E-value=0.00052  Score=59.89  Aligned_cols=38  Identities=24%  Similarity=0.265  Sum_probs=34.6

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      +.+||-.|||.|+++..+|++|+.|.|.|.|--|+-..
T Consensus        31 ~~~vLDiGcG~G~~a~~la~~g~~V~~iD~s~~~l~~a   68 (195)
T TIGR00477        31 PCKTLDLGCGQGRNSLYLSLAGYDVRAWDHNPASIASV   68 (195)
T ss_pred             CCcEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            45899999999999999999999999999999888644

Part of a tellurite-reducing operon tehA and tehB

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=97.09  E-value=0.00041  Score=60.61  Aligned_cols=39  Identities=23%  Similarity=0.213  Sum_probs=35.0

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +.+||-.|||.|+++..||++|+.|.|.|.|--|+-..+
T Consensus        31 ~~~vLDiGcG~G~~a~~La~~g~~V~gvD~S~~~i~~a~   69 (197)
T PRK11207         31 PGKTLDLGCGNGRNSLYLAANGFDVTAWDKNPMSIANLE   69 (197)
T ss_pred             CCcEEEECCCCCHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            468999999999999999999999999999999975443

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.80  E-value=0.0055  Score=47.05  Aligned_cols=42  Identities=24%  Similarity=0.235  Sum_probs=36.6

Q ss_pred             CCeEEecCCCchhhHHHHHh--hCCeeeeechhHHHHHHHHHHh
Q 023006          190 PPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~--~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+||--|||.|+++.++++  .|..+.|.|.|--|+-..+=..
T Consensus         2 ~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~   45 (112)
T PF12847_consen    2 GGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERA   45 (112)
T ss_dssp             TCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHH
T ss_pred             CCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            45899999999999999999  6999999999999986555444

...

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.51  E-value=0.0084  Score=53.41  Aligned_cols=77  Identities=14%  Similarity=0.175  Sum_probs=55.4

Q ss_pred             chHHHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHH
Q 023006          144 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYM  223 (289)
Q Consensus       144 D~dKV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~M  223 (289)
                      |..+|.......+..|...     ......+.+.|.+.++..   ...+||-.|||.|+++..++..|..+.++|.|--|
T Consensus         5 ~k~~i~~~F~~aa~~Y~~~-----~~~q~~~a~~l~~~l~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~~~D~s~~~   76 (251)
T PRK10258          5 NKQAIAAAFGRAAAHYEQH-----AELQRQSADALLAMLPQR---KFTHVLDAGCGPGWMSRYWRERGSQVTALDLSPPM   76 (251)
T ss_pred             CHHHHHHHHHHHHHhHhHH-----HHHHHHHHHHHHHhcCcc---CCCeEEEeeCCCCHHHHHHHHcCCeEEEEECCHHH
Confidence            3455665555555555432     123456777777776642   45689999999999999999999999999999999


Q ss_pred             HHHHH
Q 023006          224 MICSS  228 (289)
Q Consensus       224 LLaS~  228 (289)
                      +-..+
T Consensus        77 l~~a~   81 (251)
T PRK10258         77 LAQAR   81 (251)
T ss_pred             HHHHH
Confidence            86543

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=96.38  E-value=0.011  Score=45.79  Aligned_cols=43  Identities=21%  Similarity=0.193  Sum_probs=37.6

Q ss_pred             CeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHHHhhc
Q 023006          191 PACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNH  233 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~FILN~  233 (289)
                      .+||-||||.|+++..++++| ..+.|.|.+-..+-..+..+..
T Consensus         2 ~~vlD~~~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~   45 (117)
T PF13659_consen    2 DRVLDPGCGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPR   45 (117)
T ss_dssp             EEEEEETSTTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHH
T ss_pred             CEEEEcCcchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHH
Confidence            489999999999999999999 8889999999987777665554

...

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.09  E-value=0.037  Score=49.85  Aligned_cols=41  Identities=24%  Similarity=0.303  Sum_probs=36.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .+.+||-.|||.|+++..+|++|..+.|.|.|--|+-..+-
T Consensus        44 ~~~~vLDiGcG~G~~a~~la~~g~~v~~vD~s~~~l~~a~~   84 (255)
T PRK11036         44 RPLRVLDAGGGEGQTAIKLAELGHQVILCDLSAEMIQRAKQ   84 (255)
T ss_pred             CCCEEEEeCCCchHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            35699999999999999999999999999999999876543

>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C

Probab=95.92  E-value=0.015  Score=46.76  Aligned_cols=52  Identities=23%  Similarity=0.321  Sum_probs=41.3

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC  226 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLa  226 (289)
                      .+.+.|+++.+.  .....+||==|||.|+++..+++.|+.+.|.|.|--|+-.
T Consensus         8 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~g~D~~~~~~~~   59 (161)
T PF13489_consen    8 AYADLLERLLPR--LKPGKRVLDIGCGTGSFLRALAKRGFEVTGVDISPQMIEK   59 (161)
T ss_dssp             CHHHHHHHHHTC--TTTTSEEEEESSTTSHHHHHHHHTTSEEEEEESSHHHHHH
T ss_pred             HHHHHHHHHhcc--cCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHhh
Confidence            344555554432  2356799999999999999999999999999999998865

...

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=95.87  E-value=0.012  Score=54.20  Aligned_cols=37  Identities=24%  Similarity=0.265  Sum_probs=34.0

Q ss_pred             CeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .+||--|||.||++..+|++|+.+.|.|.|--|+-..
T Consensus       122 ~~vLDlGcG~G~~~~~la~~g~~V~avD~s~~ai~~~  158 (287)
T PRK12335        122 GKALDLGCGQGRNSLYLALLGFDVTAVDINQQSLENL  158 (287)
T ss_pred             CCEEEeCCCCCHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            3899999999999999999999999999999987643

>PRK07580 Mg-protoporphyrin IX methyl transferase; Validated

Probab=95.71  E-value=0.026  Score=48.88  Aligned_cols=40  Identities=20%  Similarity=0.270  Sum_probs=35.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|+++..+++.|..+.|.|.|--|+-..+
T Consensus        63 ~~~~vLDvGcG~G~~~~~l~~~~~~v~~~D~s~~~i~~a~  102 (230)
T PRK07580         63 TGLRILDAGCGVGSLSIPLARRGAKVVASDISPQMVEEAR  102 (230)
T ss_pred             CCCEEEEEeCCCCHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            4568999999999999999999999999999999976554

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=95.65  E-value=0.021  Score=51.49  Aligned_cols=42  Identities=26%  Similarity=0.302  Sum_probs=33.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH-HHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI-CSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL-aS~FI  230 (289)
                      ++-+||=-|||.||-|.-||++||.|++.|.|--.+- +.+.+
T Consensus        30 ~~g~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~~a   72 (192)
T PF03848_consen   30 KPGKALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQRLA   72 (192)
T ss_dssp             -SSEEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHHHH
T ss_pred             CCCcEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            4569999999999999999999999999999987774 34443

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase

Probab=95.56  E-value=0.088  Score=46.08  Aligned_cols=58  Identities=22%  Similarity=0.268  Sum_probs=44.8

Q ss_pred             HhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          167 RDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       167 Rd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ++..+..+++.|..  +   .....+||=.|||.|.++..++..|..+.|.|.|--|+...+-
T Consensus        38 ~~~~~~~~~~~l~~--~---~~~~~~vLDiGcG~G~~~~~la~~~~~v~gvD~s~~~i~~a~~   95 (219)
T TIGR02021        38 RAAMRRKLLDWLPK--D---PLKGKRVLDAGCGTGLLSIELAKRGAIVKAVDISEQMVQMARN   95 (219)
T ss_pred             HHHHHHHHHHHHhc--C---CCCCCEEEEEeCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            33445566666654  1   1245689999999999999999999999999999999876543

This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM.

>PLN02585 magnesium protoporphyrin IX methyltransferase

Probab=95.44  E-value=0.027  Score=53.92  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=35.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      +..+||=-|||.|+++..++++|+.+.|.|+|.-|+-..
T Consensus       144 ~~~~VLDlGcGtG~~a~~la~~g~~V~gvD~S~~ml~~A  182 (315)
T PLN02585        144 AGVTVCDAGCGTGSLAIPLALEGAIVSASDISAAMVAEA  182 (315)
T ss_pred             CCCEEEEecCCCCHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            356999999999999999999999999999999998544

>PRK14967 putative methyltransferase; Provisional

Probab=94.72  E-value=0.061  Score=47.64  Aligned_cols=39  Identities=18%  Similarity=0.118  Sum_probs=34.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS  227 (289)
                      +..+||-+|||.|.++..+|+.|. .+.+.|.|-.|+-..
T Consensus        36 ~~~~vLDlGcG~G~~~~~la~~~~~~v~~vD~s~~~l~~a   75 (223)
T PRK14967         36 PGRRVLDLCTGSGALAVAAAAAGAGSVTAVDISRRAVRSA   75 (223)
T ss_pred             CCCeEEEecCCHHHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence            346899999999999999999987 789999999888644

>TIGR00740 methyltransferase, putative

Probab=94.26  E-value=0.16  Score=45.23  Aligned_cols=42  Identities=14%  Similarity=-0.016  Sum_probs=34.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh----CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~----Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||--|||.|+++..++++    +..+.|.|.|--|+-..+-.
T Consensus        53 ~~~~iLDlGcG~G~~~~~l~~~~~~p~~~v~gvD~s~~ml~~a~~~   98 (239)
T TIGR00740        53 PDSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQH   98 (239)
T ss_pred             CCCEEEEecCCCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHH
Confidence            4468999999999999999985    56799999999999555433

A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily.

>PRK14968 putative methyltransferase; Provisional

Probab=94.06  E-value=0.072  Score=44.40  Aligned_cols=39  Identities=23%  Similarity=0.340  Sum_probs=34.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      +..+||.+|||.|.++..+|++|-.+.|.|.|--|+-..
T Consensus        23 ~~~~vLd~G~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a   61 (188)
T PRK14968         23 KGDRVLEVGTGSGIVAIVAAKNGKKVVGVDINPYAVECA   61 (188)
T ss_pred             CCCEEEEEccccCHHHHHHHhhcceEEEEECCHHHHHHH
Confidence            345899999999999999999999999999999887544

>PLN02244 tocopherol O-methyltransferase

Probab=94.05  E-value=0.39  Score=45.76  Aligned_cols=58  Identities=17%  Similarity=0.163  Sum_probs=43.0

Q ss_pred             HHHHHHHhhCCC--CCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHH
Q 023006          173 PILEELDALFPN--RSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       173 PILe~L~~~fP~--~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .+++++-+....  .......+||=-|||.|.++..||++ |..+.|.|+|-.|+-..+-.
T Consensus       100 ~~~~~~l~~~~~~~~~~~~~~~VLDiGCG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~  160 (340)
T PLN02244        100 RMIEESLAWAGVPDDDEKRPKRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANAL  160 (340)
T ss_pred             HHHHHHHHhcCCCcccCCCCCeEEEecCCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHH
Confidence            455555554432  11235578999999999999999987 89999999999998655443

>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase

Probab=93.98  E-value=0.12  Score=45.87  Aligned_cols=39  Identities=21%  Similarity=0.123  Sum_probs=34.6

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||--|||.|+++..|++.  |..+.|.|.|--|+-..+
T Consensus        44 ~~~VLDiGCG~G~~~~~L~~~~~~~~v~giDiS~~~l~~A~   84 (204)
T TIGR03587        44 IASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAK   84 (204)
T ss_pred             CCcEEEEecCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence            457999999999999999987  688999999999988664

Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=93.90  E-value=0.23  Score=40.96  Aligned_cols=45  Identities=27%  Similarity=0.296  Sum_probs=37.9

Q ss_pred             CCCeEEecCCCchhhHHHHH-hh--CCeeeeechhHHHHHHHHHHhhc
Q 023006          189 SPPACLVPGAGLGRLALEIS-HL--GFISQGNEFSYYMMICSSFILNH  233 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA-~~--Gf~vqgNEfSy~MLLaS~FILN~  233 (289)
                      ++.+||=-|||.|++++.++ ++  +..+.|.|.|--|+-..+-....
T Consensus         3 ~~~~iLDlGcG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~   50 (152)
T PF13847_consen    3 SNKKILDLGCGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKE   50 (152)
T ss_dssp             TTSEEEEET-TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhccccc
Confidence            56899999999999999999 44  68899999999999888776543

...

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=93.78  E-value=0.16  Score=46.07  Aligned_cols=56  Identities=25%  Similarity=0.235  Sum_probs=42.5

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHH--HHHhhc
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICS--SFILNH  233 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS--~FILN~  233 (289)
                      -+++.|....     ....+||.-|||.|.|+..++++|.. +.|.|.|-.|+-..  ++-+|.
T Consensus       108 ~~l~~l~~~~-----~~~~~VLDiGcGsG~l~i~~~~~g~~~v~giDis~~~l~~A~~n~~~~~  166 (250)
T PRK00517        108 LCLEALEKLV-----LPGKTVLDVGCGSGILAIAAAKLGAKKVLAVDIDPQAVEAARENAELNG  166 (250)
T ss_pred             HHHHHHHhhc-----CCCCEEEEeCCcHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHcC
Confidence            3566666542     24568999999999999999999987 89999999998644  444443

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=93.64  E-value=0.16  Score=45.42  Aligned_cols=40  Identities=18%  Similarity=0.102  Sum_probs=34.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||=-|||.|+++..+|+.  +-.+.|+|.|-.|+-..+
T Consensus        31 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~   72 (258)
T PRK01683         31 NPRYVVDLGCGPGNSTELLVERWPAARITGIDSSPAMLAEAR   72 (258)
T ss_pred             CCCEEEEEcccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence            4568999999999999999987  578999999999986543

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.54  E-value=0.4  Score=41.24  Aligned_cols=40  Identities=23%  Similarity=0.195  Sum_probs=33.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC---CeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G---f~vqgNEfSy~MLLaS~  228 (289)
                      +..+||.-|||.|+++..++.++   ..+.+.|.|--|+-...
T Consensus        51 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~   93 (239)
T PRK00216         51 PGDKVLDLACGTGDLAIALAKAVGKTGEVVGLDFSEGMLAVGR   93 (239)
T ss_pred             CCCeEEEeCCCCCHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Confidence            34689999999999999999886   78899999988865443

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=93.45  E-value=0.29  Score=37.70  Aligned_cols=40  Identities=18%  Similarity=0.014  Sum_probs=33.7

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+||--|||.|+++..++++  +-.+.+.|.|..|+-..+-
T Consensus        20 ~~~vldlG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~   61 (124)
T TIGR02469        20 GDVLWDIGAGSGSITIEAARLVPNGRVYAIERNPEALRLIER   61 (124)
T ss_pred             CCEEEEeCCCCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHH
Confidence            348999999999999999987  4578899999998865543

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=93.42  E-value=0.36  Score=44.91  Aligned_cols=51  Identities=22%  Similarity=0.193  Sum_probs=39.8

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      -+++.|+++..     ...+||--|||.|.|+..++++|. .+.|.|.|-.|+-..+
T Consensus       148 l~l~~l~~~~~-----~g~~VLDvGcGsG~lai~aa~~g~~~V~avDid~~al~~a~  199 (288)
T TIGR00406       148 LCLEWLEDLDL-----KDKNVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESAR  199 (288)
T ss_pred             HHHHHHHhhcC-----CCCEEEEeCCChhHHHHHHHHcCCCeEEEEECCHHHHHHHH
Confidence            35556665432     346899999999999999999986 6889999999886653

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=93.41  E-value=0.17  Score=45.55  Aligned_cols=39  Identities=18%  Similarity=0.201  Sum_probs=34.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+||==|||.|.++..|+++  |..+.|.|.|--|+-..
T Consensus        29 ~~~~vLDlGcG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a   69 (255)
T PRK14103         29 RARRVVDLGCGPGNLTRYLARRWPGAVIEALDSSPEMVAAA   69 (255)
T ss_pred             CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence            4468999999999999999998  78899999999998644

>TIGR00452 methyltransferase, putative

Probab=93.01  E-value=0.54  Score=45.16  Aligned_cols=80  Identities=14%  Similarity=0.117  Sum_probs=51.0

Q ss_pred             CchHHHHHHHhhhhhcCCcCChHHHhhhh------HHH-HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe-e
Q 023006          143 ADVDKVRCIIRNIVRDWAAEGKTERDQCY------KPI-LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI-S  214 (289)
Q Consensus       143 ~D~dKV~stLkq~vRDWS~EG~~ERd~~y------~PI-Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~-v  214 (289)
                      .+..++...|+++ .-|.. |..+..+..      ..+ .+.+..++..   ....+||=-|||.|++++.++..|.. +
T Consensus        73 ~~~~~l~~~l~~l-~p~~~-~~~~l~~~~~~~e~~s~~~~~~~l~~l~~---~~g~~VLDvGCG~G~~~~~~~~~g~~~v  147 (314)
T TIGR00452        73 GQIKRILEEIMAL-MPWRK-GPFELSGIKIDSEWRSDIKWDRVLPHLSP---LKGRTILDVGCGSGYHMWRMLGHGAKSL  147 (314)
T ss_pred             HHHHHHHHHHHhc-CCCCC-CCcccccccCCHHHHHHHHHHHHHHhcCC---CCCCEEEEeccCCcHHHHHHHHcCCCEE
Confidence            4455677777775 56763 333333211      111 1222222221   23458999999999999999999874 8


Q ss_pred             eeechhHHHHHHH
Q 023006          215 QGNEFSYYMMICS  227 (289)
Q Consensus       215 qgNEfSy~MLLaS  227 (289)
                      .|.|.|-.|+.-.
T Consensus       148 ~GiDpS~~ml~q~  160 (314)
T TIGR00452       148 VGIDPTVLFLCQF  160 (314)
T ss_pred             EEEcCCHHHHHHH
Confidence            9999999998543

Known examples to date are restricted to the proteobacteria.

>smart00650 rADc Ribosomal RNA adenine dimethylases

Probab=92.99  E-value=0.2  Score=42.44  Aligned_cols=40  Identities=18%  Similarity=0.066  Sum_probs=34.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||=-|||.|.|+.++++++-.+.+.|.+-.|+-..+
T Consensus        13 ~~~~vLEiG~G~G~lt~~l~~~~~~v~~vE~~~~~~~~~~   52 (169)
T smart00650       13 PGDTVLEIGPGKGALTEELLERAARVTAIEIDPRLAPRLR   52 (169)
T ss_pred             CcCEEEEECCCccHHHHHHHhcCCeEEEEECCHHHHHHHH
Confidence            3458999999999999999999989999999988876543

>PRK04148 hypothetical protein; Provisional

Probab=92.98  E-value=0.18  Score=43.38  Aligned_cols=48  Identities=15%  Similarity=0.091  Sum_probs=39.9

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchh-hHHHHHhhCCeeeeechhHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGR-LALEISHLGFISQGNEFSYYM  223 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGR-LA~EIA~~Gf~vqgNEfSy~M  223 (289)
                      .|-++|.+.++..   +..+||+=|+|.|. +|-.|+++|+.|.+.|.+-..
T Consensus         3 ~i~~~l~~~~~~~---~~~kileIG~GfG~~vA~~L~~~G~~ViaIDi~~~a   51 (134)
T PRK04148          3 TIAEFIAENYEKG---KNKKIVELGIGFYFKVAKKLKESGFDVIVIDINEKA   51 (134)
T ss_pred             HHHHHHHHhcccc---cCCEEEEEEecCCHHHHHHHHHCCCEEEEEECCHHH
Confidence            4667777777653   34689999999995 999999999999999999884

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=92.90  E-value=0.14  Score=37.30  Aligned_cols=39  Identities=28%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             EecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHhh
Q 023006          194 LVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       194 LVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      |--|||.|+.+.-++++ +..+.+.|.|.-|+-..+=...
T Consensus         1 LdiG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~   40 (95)
T PF08241_consen    1 LDIGCGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLK   40 (95)
T ss_dssp             EEET-TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTT
T ss_pred             CEecCcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhccc
Confidence            55799999999999999 9999999999998877665544

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed

Probab=92.88  E-value=0.3  Score=45.03  Aligned_cols=53  Identities=17%  Similarity=0.119  Sum_probs=41.6

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+++.+-+.+..   .+..+||=-|||.|.|+..|+++|-.+.|.|.|--|+-..+
T Consensus        29 ~i~~~i~~~l~~---~~~~~VLEiG~G~G~lt~~L~~~~~~v~avE~d~~~~~~~~   81 (272)
T PRK00274         29 NILDKIVDAAGP---QPGDNVLEIGPGLGALTEPLLERAAKVTAVEIDRDLAPILA   81 (272)
T ss_pred             HHHHHHHHhcCC---CCcCeEEEeCCCccHHHHHHHHhCCcEEEEECCHHHHHHHH
Confidence            355555554432   23458999999999999999999889999999999886653

>TIGR02072 BioC biotin biosynthesis protein BioC

Probab=92.86  E-value=0.3  Score=41.80  Aligned_cols=40  Identities=20%  Similarity=0.095  Sum_probs=33.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe--eeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~--vqgNEfSy~MLLaS~  228 (289)
                      .+.+||-.|||.|.+...+++.|..  +.+.|.|..|+-...
T Consensus        34 ~~~~vLDlG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   75 (240)
T TIGR02072        34 IPASVLDIGCGTGYLTRALLKRFPQAEFIALDISAGMLAQAK   75 (240)
T ss_pred             CCCeEEEECCCccHHHHHHHHhCCCCcEEEEeChHHHHHHHH
Confidence            3468999999999999999998754  489999999985443

This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=92.29  E-value=0.58  Score=42.93  Aligned_cols=82  Identities=20%  Similarity=0.067  Sum_probs=51.3

Q ss_pred             CchHHHHHHHhhhhhcCCcCChHHHhhh---hHHHHH-HHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-C--Ceee
Q 023006          143 ADVDKVRCIIRNIVRDWAAEGKTERDQC---YKPILE-ELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQ  215 (289)
Q Consensus       143 ~D~dKV~stLkq~vRDWS~EG~~ERd~~---y~PILe-~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-G--f~vq  215 (289)
                      .|+-++.+.++.+...++..+..-.+..   +..+.. .+.+....   ++..+||-=|||.|+++..+++. |  -.+.
T Consensus        26 ~~~~~~~~~v~~~f~~~A~~YD~~~~~~s~g~~~~~r~~~~~~~~~---~~~~~VLDlGcGtG~~~~~la~~~~~~~~V~  102 (261)
T PLN02233         26 RDVVKCANERQALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWSGA---KMGDRVLDLCCGSGDLAFLLSEKVGSDGKVM  102 (261)
T ss_pred             CChhhhHHHHHHHHHHhhhHHHHhhhhhcCChhHHHHHHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCCEEE
Confidence            5666666666666666665554322210   111211 12222221   24568999999999999999986 4  3789


Q ss_pred             eechhHHHHHHH
Q 023006          216 GNEFSYYMMICS  227 (289)
Q Consensus       216 gNEfSy~MLLaS  227 (289)
                      |.|.|--|+-..
T Consensus       103 gvD~S~~ml~~A  114 (261)
T PLN02233        103 GLDFSSEQLAVA  114 (261)
T ss_pred             EEECCHHHHHHH
Confidence            999999998654

>TIGR01177 conserved hypothetical protein TIGR01177

Probab=92.21  E-value=0.39  Score=45.35  Aligned_cols=44  Identities=20%  Similarity=0.284  Sum_probs=37.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +..+||=||||.|.++.|.+..|..+.|.|.|.-|+-..+--+.
T Consensus       182 ~g~~vLDp~cGtG~~lieaa~~~~~v~g~Di~~~~~~~a~~nl~  225 (329)
T TIGR01177       182 EGDRVLDPFCGTGGFLIEAGLMGAKVIGCDIDWKMVAGARINLE  225 (329)
T ss_pred             CcCEEEECCCCCCHHHHHHHHhCCeEEEEcCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999876554443

This family is found exclusively in the Archaea.

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=92.02  E-value=0.61  Score=44.89  Aligned_cols=56  Identities=16%  Similarity=0.086  Sum_probs=43.6

Q ss_pred             HHHHHHHhhCCCCC----CCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRS----KESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~----~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .|.+.|.++++...    .....+||==|||.|+++..+|+.|+.+.|.|.|--|+-..+
T Consensus       111 ~i~~~l~~~~~~~~~~~~~~~g~~ILDIGCG~G~~s~~La~~g~~V~GID~s~~~i~~Ar  170 (322)
T PLN02396        111 FIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIAR  170 (322)
T ss_pred             HHHHHHHHHhccchhhccCCCCCEEEEeeCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35555666665321    124458999999999999999999999999999999987665

>PRK05785 hypothetical protein; Provisional

Probab=91.92  E-value=0.4  Score=43.13  Aligned_cols=51  Identities=14%  Similarity=0.239  Sum_probs=41.2

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+++.|....+     ...+||==|||+|+++..|+++ |..+.|.|+|--|+-..+
T Consensus        40 ~~~~~l~~~~~-----~~~~VLDlGcGtG~~~~~l~~~~~~~v~gvD~S~~Ml~~a~   91 (226)
T PRK05785         40 ELVKTILKYCG-----RPKKVLDVAAGKGELSYHFKKVFKYYVVALDYAENMLKMNL   91 (226)
T ss_pred             HHHHHHHHhcC-----CCCeEEEEcCCCCHHHHHHHHhcCCEEEEECCCHHHHHHHH
Confidence            45666665433     2458999999999999999998 789999999999987643

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=91.90  E-value=0.61  Score=42.12  Aligned_cols=40  Identities=15%  Similarity=0.043  Sum_probs=33.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhh----CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~----Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||-=|||.|.++..+++.    |..+.|.|.|.-|+-..+
T Consensus        56 ~~~~vLDlGcGtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~   99 (247)
T PRK15451         56 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCR   99 (247)
T ss_pred             CCCEEEEEcccCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHH
Confidence            3468999999999999999872    678999999999995543

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=91.70  E-value=0.5  Score=45.00  Aligned_cols=41  Identities=17%  Similarity=0.082  Sum_probs=35.0

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||==|||.|++++.+|..|.. |.|.|.|..|+.-.+.+
T Consensus       123 g~~VLDIGCG~G~~~~~la~~g~~~V~GiD~S~~~l~q~~a~  164 (322)
T PRK15068        123 GRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQFEAV  164 (322)
T ss_pred             CCEEEEeccCCcHHHHHHHHcCCCEEEEEcCCHHHHHHHHHH
Confidence            458999999999999999999865 89999999998644443

>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase

Probab=91.45  E-value=0.96  Score=39.15  Aligned_cols=40  Identities=23%  Similarity=0.138  Sum_probs=35.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||--|||.|.++..+++.|..+.+.|.|--|+-..+
T Consensus        45 ~~~~vLdlG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~   84 (224)
T TIGR01983        45 FGLRVLDVGCGGGLLSEPLARLGANVTGIDASEENIEVAK   84 (224)
T ss_pred             CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            4678999999999999999999999999999999876554

This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=91.41  E-value=0.19  Score=47.31  Aligned_cols=80  Identities=19%  Similarity=0.111  Sum_probs=54.0

Q ss_pred             HHHHHHHhhhhhcCCcCChHHHhhhhHHH-HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHH
Q 023006          146 DKVRCIIRNIVRDWAAEGKTERDQCYKPI-LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMM  224 (289)
Q Consensus       146 dKV~stLkq~vRDWS~EG~~ERd~~y~PI-Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~ML  224 (289)
                      ...-+.|++...|  .+|+...--...|+ ++.+.+....+......+||==|||-|-|+--+|++|+.|+|+|.|--|+
T Consensus        17 ~~~F~~la~~wwd--~~g~f~~LH~~N~~rl~~i~~~~~~~~~l~g~~vLDvGCGgG~Lse~mAr~Ga~VtgiD~se~~I   94 (243)
T COG2227          17 LDKFEALASRWWD--PEGEFKPLHKINPLRLDYIREVARLRFDLPGLRVLDVGCGGGILSEPLARLGASVTGIDASEKPI   94 (243)
T ss_pred             HHHHHHHHhhhcC--CCCceeeeeeeccchhhhhhhhhhcccCCCCCeEEEecCCccHhhHHHHHCCCeeEEecCChHHH
Confidence            4445677776655  45554443233322 22333333322224678999999999999999999999999999999887


Q ss_pred             HHH
Q 023006          225 ICS  227 (289)
Q Consensus       225 LaS  227 (289)
                      =..
T Consensus        95 ~~A   97 (243)
T COG2227          95 EVA   97 (243)
T ss_pred             HHH
Confidence            554

>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific

Probab=91.38  E-value=0.55  Score=41.14  Aligned_cols=42  Identities=19%  Similarity=0.159  Sum_probs=36.0

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+||=+|||.|.++..+++.  +..+.|.|.|.-|+-...-.+
T Consensus        88 ~~~ilDig~G~G~~~~~l~~~~~~~~v~~iD~~~~~~~~a~~~~  131 (251)
T TIGR03534        88 PLRVLDLGTGSGAIALALAKERPDARVTAVDISPEALAVARKNA  131 (251)
T ss_pred             CCeEEEEeCcHhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence            458999999999999999987  678899999999987665444

Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=91.28  E-value=0.39  Score=40.86  Aligned_cols=39  Identities=21%  Similarity=0.257  Sum_probs=34.5

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +.+||-.|||.|.++..++.+|-.+.+.|.|.-|+-..+
T Consensus        20 ~~~vLdlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~   58 (179)
T TIGR00537        20 PDDVLEIGAGTGLVAIRLKGKGKCILTTDINPFAVKELR   58 (179)
T ss_pred             CCeEEEeCCChhHHHHHHHhcCCEEEEEECCHHHHHHHH
Confidence            357999999999999999999888999999999976543

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>TIGR03438 probable methyltransferase

Probab=91.26  E-value=0.61  Score=43.64  Aligned_cols=94  Identities=12%  Similarity=0.004  Sum_probs=57.7

Q ss_pred             HHHHHHhhhhh--cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhH
Q 023006          147 KVRCIIRNIVR--DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSY  221 (289)
Q Consensus       147 KV~stLkq~vR--DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy  221 (289)
                      +=.....+|++  +|-. -..|.+ .+....+.|.+.++     ...+||=.|||.||.+..|++.   |+.+.+.|.|-
T Consensus        26 ~G~~lf~~i~~~peYy~-tr~E~~-il~~~~~~ia~~~~-----~~~~iLELGcGtG~~t~~Ll~~l~~~~~~~~iDiS~   98 (301)
T TIGR03438        26 RGSELFEQICELPEYYP-TRTEAA-ILERHADEIAAATG-----AGCELVELGSGSSRKTRLLLDALRQPARYVPIDISA   98 (301)
T ss_pred             hHHHHHHHHHCCCcccc-HHHHHH-HHHHHHHHHHHhhC-----CCCeEEecCCCcchhHHHHHHhhccCCeEEEEECCH
Confidence            44455666666  4443 334432 33333444444443     3457999999999999999877   69999999999


Q ss_pred             HHHHHHHHHhhccCCCCceEEeeccccc
Q 023006          222 YMMICSSFILNHTETAGEWNIYPWIHSN  249 (289)
Q Consensus       222 ~MLLaS~FILN~~~~~~~~tIyPFihs~  249 (289)
                      -||-...=-+...  ....+|.+....+
T Consensus        99 ~mL~~a~~~l~~~--~p~~~v~~i~gD~  124 (301)
T TIGR03438        99 DALKESAAALAAD--YPQLEVHGICADF  124 (301)
T ss_pred             HHHHHHHHHHHhh--CCCceEEEEEEcc
Confidence            9986553322211  1235566655444

This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases

>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional

Probab=91.19  E-value=0.51  Score=43.13  Aligned_cols=52  Identities=13%  Similarity=0.109  Sum_probs=41.0

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +++.|.+....   .+..+||--|||.|.|...|++++..+.+.|.+--|+-...
T Consensus        17 ~~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~L~~~~~~v~~vEid~~~~~~l~   68 (258)
T PRK14896         17 VVDRIVEYAED---TDGDPVLEIGPGKGALTDELAKRAKKVYAIELDPRLAEFLR   68 (258)
T ss_pred             HHHHHHHhcCC---CCcCeEEEEeCccCHHHHHHHHhCCEEEEEECCHHHHHHHH
Confidence            55555554432   24568999999999999999999989999999998876554

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=90.98  E-value=0.2  Score=44.13  Aligned_cols=51  Identities=22%  Similarity=0.163  Sum_probs=39.5

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      ......++|+.    ...+||--|||.|.++..||+.  +-.+.|+|.|-.|+-...
T Consensus        29 ~~~~~~~~~~~----~~~~VLDiGcGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~   81 (202)
T PRK00121         29 APLDWAELFGN----DAPIHLEIGFGKGEFLVEMAKANPDINFIGIEVHEPGVGKAL   81 (202)
T ss_pred             CCCCHHHHcCC----CCCeEEEEccCCCHHHHHHHHHCCCccEEEEEechHHHHHHH
Confidence            33445555554    3568999999999999999987  467899999999886554

>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed

Probab=90.82  E-value=0.59  Score=43.93  Aligned_cols=39  Identities=23%  Similarity=0.328  Sum_probs=35.3

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||=.|||.|.++..+|+.|-.+.|.|.|-.|+-..+
T Consensus       174 ~~~VLDl~cG~G~~sl~la~~~~~V~gvD~s~~av~~A~  212 (315)
T PRK03522        174 PRSMWDLFCGVGGFGLHCATPGMQLTGIEISAEAIACAK  212 (315)
T ss_pred             CCEEEEccCCCCHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence            358999999999999999999999999999999987654

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=90.47  E-value=0.48  Score=43.28  Aligned_cols=39  Identities=18%  Similarity=0.155  Sum_probs=32.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-----CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-----GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-----Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+||-=|||.|.++..|++.     |..+.|.|.|-.|+-..
T Consensus        85 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A  128 (272)
T PRK11088         85 KATALLDIGCGEGYYTHALADALPEITTMQLFGLDISKVAIKYA  128 (272)
T ss_pred             CCCeEEEECCcCCHHHHHHHHhcccccCCeEEEECCCHHHHHHH
Confidence            3467999999999999999875     24679999999998654

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=90.42  E-value=1.9  Score=37.84  Aligned_cols=51  Identities=20%  Similarity=0.076  Sum_probs=39.8

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .++.|......   ....+||--|||.|.++..+++.|..+.+.|.|.-|+...
T Consensus        36 ~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a   86 (233)
T PRK05134         36 RLNYIREHAGG---LFGKRVLDVGCGGGILSESMARLGADVTGIDASEENIEVA   86 (233)
T ss_pred             HHHHHHHhccC---CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            34555554431   2456899999999999999999999999999998886544

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=89.85  E-value=0.59  Score=45.83  Aligned_cols=38  Identities=21%  Similarity=0.212  Sum_probs=34.4

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      ..+||=-|||.|+++..+|+.+..+.|+|+|--|+-..
T Consensus        38 ~~~vLDlGcG~G~~~~~la~~~~~v~giD~s~~~l~~a   75 (475)
T PLN02336         38 GKSVLELGAGIGRFTGELAKKAGQVIALDFIESVIKKN   75 (475)
T ss_pred             CCEEEEeCCCcCHHHHHHHhhCCEEEEEeCCHHHHHHH
Confidence            44899999999999999999999999999999998543

>KOG1271 consensus Methyltransferases [General function prediction only]

Probab=89.52  E-value=1.1  Score=41.70  Aligned_cols=74  Identities=26%  Similarity=0.392  Sum_probs=51.5

Q ss_pred             CCcCChHHHhhhhHHHHHHHHhhCC-CCCCCCCCeEEecCCCchhhHHHHHhhCCee--eeechhHHHHHHHHHHhhccC
Q 023006          159 WAAEGKTERDQCYKPILEELDALFP-NRSKESPPACLVPGAGLGRLALEISHLGFIS--QGNEFSYYMMICSSFILNHTE  235 (289)
Q Consensus       159 WS~EG~~ERd~~y~PILe~L~~~fP-~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~v--qgNEfSy~MLLaS~FILN~~~  235 (289)
                      |=.+-+.||      |++.|..... .+-.+...+||==|||-|.|.++||+.||..  +|.|||--..-...-|-.+..
T Consensus        42 WFg~~ae~r------iv~wl~d~~~~~rv~~~A~~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~  115 (227)
T KOG1271|consen   42 WFGEDAEER------IVDWLKDLIVISRVSKQADRVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDG  115 (227)
T ss_pred             ecCCcHHHH------HHHHHHhhhhhhhhcccccceeeccCCchHHHHHHHHhcCCCCccccccCHHHHHHHHHHHHhcC
Confidence            666667777      5555555433 1112234499999999999999999999998  699999877655555555443


Q ss_pred             CCC
Q 023006          236 TAG  238 (289)
Q Consensus       236 ~~~  238 (289)
                      ..+
T Consensus       116 ~~n  118 (227)
T KOG1271|consen  116 FSN  118 (227)
T ss_pred             CCc
Confidence            333

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=89.00  E-value=0.53  Score=36.20  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=27.5

Q ss_pred             EEecCCCchhhHHHHHhh---C--CeeeeechhHHHHHHH
Q 023006          193 CLVPGAGLGRLALEISHL---G--FISQGNEFSYYMMICS  227 (289)
Q Consensus       193 VLVPGsGLGRLA~EIA~~---G--f~vqgNEfSy~MLLaS  227 (289)
                      ||=.|||.||....++..   |  -.+.|.|+|--|+-..
T Consensus         1 ILDlgcG~G~~~~~l~~~~~~~~~~~~~gvD~s~~~l~~~   40 (101)
T PF13649_consen    1 ILDLGCGTGRVTRALARRFDAGPSSRVIGVDISPEMLELA   40 (101)
T ss_dssp             -EEET-TTSHHHHHHHHHS-----SEEEEEES-HHHHHHH
T ss_pred             CEEeecCCcHHHHHHHHHhhhcccceEEEEECCHHHHHHH
Confidence            677899999999999988   4  7888999999998644

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=88.93  E-value=0.89  Score=41.77  Aligned_cols=40  Identities=23%  Similarity=0.211  Sum_probs=34.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||=-|||.|.++..||+. |..+.|.|.|--|+-..+
T Consensus        52 ~~~~VLDiGcG~G~~a~~la~~~~~~v~giD~s~~~~~~a~   92 (263)
T PTZ00098         52 ENSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVNIAK   92 (263)
T ss_pred             CCCEEEEEcCCCChhhHHHHhhcCCEEEEEECCHHHHHHHH
Confidence            4568999999999999999875 789999999999976544

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=88.83  E-value=1.2  Score=43.69  Aligned_cols=40  Identities=23%  Similarity=0.118  Sum_probs=34.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|.++..+|+. |..+.|.|.|--|+-..+
T Consensus       167 ~g~rVLDIGcG~G~~a~~la~~~g~~V~giDlS~~~l~~A~  207 (383)
T PRK11705        167 PGMRVLDIGCGWGGLARYAAEHYGVSVVGVTISAEQQKLAQ  207 (383)
T ss_pred             CCCEEEEeCCCccHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            4568999999999999999986 899999999999986543

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

Probab=88.70  E-value=0.72  Score=32.49  Aligned_cols=37  Identities=27%  Similarity=0.310  Sum_probs=31.7

Q ss_pred             eEEecCCCchhhHHHHHh-hCCeeeeechhHHHHHHHH
Q 023006          192 ACLVPGAGLGRLALEISH-LGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       192 rVLVPGsGLGRLA~EIA~-~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +||..|||.|.+...+++ .+..+.+.|.+.-++....
T Consensus         1 ~ildig~G~G~~~~~~~~~~~~~~~~~d~~~~~~~~~~   38 (107)
T cd02440           1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELAR   38 (107)
T ss_pred             CeEEEcCCccHHHHHHhcCCCCEEEEEeCCHHHHHHHH
Confidence            488999999999999998 5788899999988776665

There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).

>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=87.72  E-value=0.11  Score=39.43  Aligned_cols=28  Identities=29%  Similarity=0.341  Sum_probs=25.7

Q ss_pred             CCCchhhHHHHHhh--CCeeeeechhHHHH
Q 023006          197 GAGLGRLALEISHL--GFISQGNEFSYYMM  224 (289)
Q Consensus       197 GsGLGRLA~EIA~~--Gf~vqgNEfSy~ML  224 (289)
                      |||.|++...|+..  +..+.|.|.|--|+
T Consensus         4 GcG~G~~~~~l~~~~~~~~~~~~D~s~~~l   33 (99)
T PF08242_consen    4 GCGTGRLLRALLEELPDARYTGVDISPSML   33 (99)
T ss_dssp             STTTS-TTTTHHHHC-EEEEEEEESSSSTT
T ss_pred             CccChHHHHHHHHhCCCCEEEEEECCHHHH
Confidence            99999999999988  88899999999998

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A.

>PRK10742 putative methyltransferase; Provisional

Probab=87.55  E-value=0.71  Score=43.64  Aligned_cols=57  Identities=18%  Similarity=0.151  Sum_probs=45.6

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhhcc
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHT  234 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN~~  234 (289)
                      +|++++.-    +. ...++||=-=+||||.++|+|.+|..|++.|-|-.+...-.--|...
T Consensus        77 ~l~kAvgl----k~-g~~p~VLD~TAGlG~Da~~las~G~~V~~vEr~p~vaalL~dgL~ra  133 (250)
T PRK10742         77 AVAKAVGI----KG-DYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARG  133 (250)
T ss_pred             HHHHHhCC----CC-CCCCEEEECCCCccHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh
Confidence            57776642    11 12358999999999999999999999999999999988887777763

>smart00138 MeTrc Methyltransferase, chemotaxis proteins

Probab=86.93  E-value=1.6  Score=40.42  Aligned_cols=40  Identities=5%  Similarity=0.015  Sum_probs=32.1

Q ss_pred             CCCeEEecCCCchhhHHHHHh----h-------CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISH----L-------GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~----~-------Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+.+||.-|||+|.-+|.||.    .       ++.+.|.|.|--|+-..+
T Consensus        99 ~~~ri~d~GCgtGee~YslA~~l~e~~~~~~~~~~~I~g~Dis~~~L~~Ar  149 (264)
T smart00138       99 RRVRIWSAGCSTGEEPYSLAMLLAETLPKAREPDVKILATDIDLKALEKAR  149 (264)
T ss_pred             CCEEEEeccccCChHHHHHHHHHHHHhhhcCCCCeEEEEEECCHHHHHHHH
Confidence            568999999999997776653    2       478999999999996543

Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.

>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific

Probab=86.46  E-value=3.5  Score=38.56  Aligned_cols=41  Identities=12%  Similarity=0.003  Sum_probs=35.0

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||=.|||.|.++..+|+.  +..+.|.|.|--|+-..+--
T Consensus       122 ~~~vLDlG~GsG~i~~~la~~~~~~~v~avDis~~al~~A~~n  164 (284)
T TIGR03533       122 VKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEIN  164 (284)
T ss_pred             CCEEEEEeCchhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence            468999999999999999987  57899999999998665433

Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=86.37  E-value=5.5  Score=35.30  Aligned_cols=39  Identities=10%  Similarity=-0.044  Sum_probs=33.8

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||-=|||.|.++..+|++  +..+.+.|.|--|+-..+
T Consensus        46 g~~VLDiGcGtG~~al~la~~~~~~~V~giD~s~~~l~~A~   86 (187)
T PRK00107         46 GERVLDVGSGAGFPGIPLAIARPELKVTLVDSLGKKIAFLR   86 (187)
T ss_pred             CCeEEEEcCCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHH
Confidence            568999999999999999974  688999999999985443

>PRK06202 hypothetical protein; Provisional

Probab=86.24  E-value=6.3  Score=34.88  Aligned_cols=40  Identities=20%  Similarity=0.262  Sum_probs=33.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh----CC--eeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL----GF--ISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~----Gf--~vqgNEfSy~MLLaS~  228 (289)
                      +..+||==|||.|.++..|++.    |+  .+.|.|.|.-|+-..+
T Consensus        60 ~~~~iLDlGcG~G~~~~~L~~~~~~~g~~~~v~gvD~s~~~l~~a~  105 (232)
T PRK06202         60 RPLTLLDIGCGGGDLAIDLARWARRDGLRLEVTAIDPDPRAVAFAR  105 (232)
T ss_pred             CCcEEEEeccCCCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH
Confidence            5679999999999999999853    54  7899999999986543

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=86.05  E-value=3.2  Score=36.24  Aligned_cols=40  Identities=15%  Similarity=0.140  Sum_probs=33.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||=-|||.|.++..+++.   +..+.|.|.|-.|+-...
T Consensus        45 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~   87 (231)
T TIGR02752        45 AGTSALDVCCGTADWSIALAEAVGPEGHVIGLDFSENMLSVGR   87 (231)
T ss_pred             CCCEEEEeCCCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence            3468999999999999999976   368899999999975443

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=85.57  E-value=4.3  Score=35.50  Aligned_cols=38  Identities=11%  Similarity=-0.037  Sum_probs=32.4

Q ss_pred             CCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICS  227 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS  227 (289)
                      ..+||-=|||.|.++..+|.++  ..+.|.|.|--|+-..
T Consensus        43 ~~~vLDiGcGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a   82 (181)
T TIGR00138        43 GKKVIDIGSGAGFPGIPLAIARPELKLTLLESNHKKVAFL   82 (181)
T ss_pred             CCeEEEecCCCCccHHHHHHHCCCCeEEEEeCcHHHHHHH
Confidence            4589999999999999999774  5689999999988433

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=85.29  E-value=6.5  Score=36.92  Aligned_cols=52  Identities=21%  Similarity=0.125  Sum_probs=36.2

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICS  227 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS  227 (289)
                      ..++.|-+....   ++..+||-=|||-|.++..+|++ |..|+|...|--+.-..
T Consensus        49 ~k~~~~~~~~~l---~~G~~vLDiGcGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a  101 (273)
T PF02353_consen   49 RKLDLLCEKLGL---KPGDRVLDIGCGWGGLAIYAAERYGCHVTGITLSEEQAEYA  101 (273)
T ss_dssp             HHHHHHHTTTT-----TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHH
T ss_pred             HHHHHHHHHhCC---CCCCEEEEeCCCccHHHHHHHHHcCcEEEEEECCHHHHHHH
Confidence            355555554432   35679999999999999999999 99999999999887654

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases

Probab=85.12  E-value=7.2  Score=33.25  Aligned_cols=52  Identities=15%  Similarity=0.139  Sum_probs=41.9

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe--eeeechhHHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSSFI  230 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~--vqgNEfSy~MLLaS~FI  230 (289)
                      .-|++.|...       ...+||--|||.|-|+.-+|+++-.  +.+.|.|..++-+..--
T Consensus        21 ~lL~~~l~~~-------~~~~vLDlG~G~G~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n   74 (170)
T PF05175_consen   21 RLLLDNLPKH-------KGGRVLDLGCGSGVISLALAKRGPDAKVTAVDINPDALELAKRN   74 (170)
T ss_dssp             HHHHHHHHHH-------TTCEEEEETSTTSHHHHHHHHTSTCEEEEEEESBHHHHHHHHHH
T ss_pred             HHHHHHHhhc-------cCCeEEEecCChHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH
Confidence            4567777775       3457999999999999999999765  88999999888777443

; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....

>PRK07402 precorrin-6B methylase; Provisional

Probab=84.96  E-value=3.8  Score=35.42  Aligned_cols=40  Identities=18%  Similarity=0.018  Sum_probs=33.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||=-|||.|.++.++|++  +..+.+.|.|--|+-...
T Consensus        40 ~~~~VLDiG~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~   81 (196)
T PRK07402         40 PDSVLWDIGAGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIR   81 (196)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            4468999999999999999976  578999999998876553

>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA

Probab=84.78  E-value=2.9  Score=40.84  Aligned_cols=54  Identities=9%  Similarity=0.060  Sum_probs=41.0

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .++++.+.+.+..   .+..+||-.|||.|.++..+|+.+-.+.|.|.|--|+-..+
T Consensus       278 ~~l~~~~~~~l~~---~~~~~vLDl~cG~G~~sl~la~~~~~V~~vE~~~~av~~a~  331 (431)
T TIGR00479       278 EKLVDRALEALEL---QGEELVVDAYCGVGTFTLPLAKQAKSVVGIEVVPESVEKAQ  331 (431)
T ss_pred             HHHHHHHHHHhcc---CCCCEEEEcCCCcCHHHHHHHHhCCEEEEEEcCHHHHHHHH
Confidence            3455555554421   13358999999999999999999889999999999986553

This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=84.72  E-value=3.6  Score=35.91  Aligned_cols=40  Identities=20%  Similarity=0.032  Sum_probs=33.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||-.|||.|.++.-+|+++-.+.+.|.|--|+-..+
T Consensus        78 ~~~~VLeiG~GsG~~t~~la~~~~~v~~vd~~~~~~~~a~  117 (212)
T PRK00312         78 PGDRVLEIGTGSGYQAAVLAHLVRRVFSVERIKTLQWEAK  117 (212)
T ss_pred             CCCEEEEECCCccHHHHHHHHHhCEEEEEeCCHHHHHHHH
Confidence            4568999999999999988988668899999988875443

>TIGR00755 ksgA dimethyladenosine transferase

Probab=84.50  E-value=2.7  Score=38.15  Aligned_cols=54  Identities=13%  Similarity=0.053  Sum_probs=41.9

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +++.+-+....   .+..+||-=|||.|.|...|++++-.+.+.|.+--|+-..+-.
T Consensus        17 i~~~i~~~~~~---~~~~~VLEiG~G~G~lt~~L~~~~~~v~~iE~d~~~~~~l~~~   70 (253)
T TIGR00755        17 VIQKIVEAANV---LEGDVVLEIGPGLGALTEPLLKRAKKVTAIEIDPRLAEILRKL   70 (253)
T ss_pred             HHHHHHHhcCC---CCcCEEEEeCCCCCHHHHHHHHhCCcEEEEECCHHHHHHHHHH
Confidence            55555554432   2456899999999999999999998899999999987665533

Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=84.39  E-value=4.1  Score=39.39  Aligned_cols=86  Identities=23%  Similarity=0.195  Sum_probs=60.7

Q ss_pred             chHHHHHHHhhhhhcCCcCChHHHhh-----hhHHHHHHHHhhCCCCCCC----CCCeEEecCCCchhhHHHHHhhCCee
Q 023006          144 DVDKVRCIIRNIVRDWAAEGKTERDQ-----CYKPILEELDALFPNRSKE----SPPACLVPGAGLGRLALEISHLGFIS  214 (289)
Q Consensus       144 D~dKV~stLkq~vRDWS~EG~~ERd~-----~y~PILe~L~~~fP~~~~r----~~~rVLVPGsGLGRLA~EIA~~Gf~v  214 (289)
                      |-+.|+.--..-.-+|+.+|-.+=--     -...|-+-+.+.+++....    ...+||==|||.|=|.--||++|..|
T Consensus        35 ~~~eV~~f~~la~~wwd~~g~~~~Lh~mn~~Rl~fi~d~~~~~v~~~~p~~k~~~g~~ilDvGCGgGLLSepLArlga~V  114 (282)
T KOG1270|consen   35 DVDEVKKFQALAFTWWDEEGVRHPLHSMNQTRLPFIRDDLRNRVNNHAPGSKPLLGMKILDVGCGGGLLSEPLARLGAQV  114 (282)
T ss_pred             cHHHHHHHHHhcccccccccchhhhhhccchhhhHHHHHHHhcccccCCCccccCCceEEEeccCccccchhhHhhCCee
Confidence            33678877777778888888643211     1234555555555431111    13469999999999999999999999


Q ss_pred             eeechhHHHHHHHHH
Q 023006          215 QGNEFSYYMMICSSF  229 (289)
Q Consensus       215 qgNEfSy~MLLaS~F  229 (289)
                      +|+|.|--|.-+.+-
T Consensus       115 ~GID~s~~~V~vA~~  129 (282)
T KOG1270|consen  115 TGIDASDDMVEVANE  129 (282)
T ss_pred             EeecccHHHHHHHHH
Confidence            999999999987754

>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []

Probab=83.68  E-value=2.8  Score=42.21  Aligned_cols=80  Identities=18%  Similarity=0.114  Sum_probs=47.6

Q ss_pred             hHHHhhhhHH-HHHHHHhhCCCCCC-CCCCeEEecCCCchhhHHHHHhhC------CeeeeechhHHHHHHHHHHhhccC
Q 023006          164 KTERDQCYKP-ILEELDALFPNRSK-ESPPACLVPGAGLGRLALEISHLG------FISQGNEFSYYMMICSSFILNHTE  235 (289)
Q Consensus       164 ~~ERd~~y~P-ILe~L~~~fP~~~~-r~~~rVLVPGsGLGRLA~EIA~~G------f~vqgNEfSy~MLLaS~FILN~~~  235 (289)
                      ...|-.+|.. |.++|......... ...+.|||=|||.|-|+.-.++.|      ..|.+.|-|-...++.+-+.+...
T Consensus       159 D~vKY~~Ye~AI~~al~D~~~~~~~~~~~~vVldVGAGrGpL~~~al~A~~~~~~a~~VyAVEkn~~A~~~l~~~v~~n~  238 (448)
T PF05185_consen  159 DPVKYDQYERAIEEALKDRVRKNSYSSKDKVVLDVGAGRGPLSMFALQAGARAGGAVKVYAVEKNPNAVVTLQKRVNANG  238 (448)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHTTS-SEETT-EEEEES-TTSHHHHHHHHTTHHHCCESEEEEEESSTHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHhhhhhccccccceEEEEeCCCccHHHHHHHHHHHHhCCCeEEEEEcCCHhHHHHHHHHHHhcC
Confidence            3444444443 44555555443221 136789999999999998887765      667788888777776655544333


Q ss_pred             CCCceEEe
Q 023006          236 TAGEWNIY  243 (289)
Q Consensus       236 ~~~~~tIy  243 (289)
                      -.+.++|.
T Consensus       239 w~~~V~vi  246 (448)
T PF05185_consen  239 WGDKVTVI  246 (448)
T ss_dssp             TTTTEEEE
T ss_pred             CCCeEEEE
Confidence            34556663

These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....

>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes

Probab=83.64  E-value=3.6  Score=35.80  Aligned_cols=37  Identities=16%  Similarity=0.140  Sum_probs=32.0

Q ss_pred             eEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          192 ACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       192 rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      +||--|||.|.++..+|+.  +..+.|.|.|--|+-..+
T Consensus         2 ~vLDiGcG~G~~~~~la~~~~~~~v~gid~s~~~~~~a~   40 (224)
T smart00828        2 RVLDFGCGYGSDLIDLAERHPHLQLHGYTISPEQAEVGR   40 (224)
T ss_pred             eEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence            6999999999999999987  478899999999975443

>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=83.43  E-value=3.9  Score=36.62  Aligned_cols=43  Identities=19%  Similarity=0.147  Sum_probs=35.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||-+|||.|.++..++...  ..+.|.|.|--|+-..+-.+
T Consensus       108 ~~~~vLDiG~GsG~~~~~la~~~~~~~v~~iDis~~~l~~a~~n~  152 (275)
T PRK09328        108 EPLRVLDLGTGSGAIALALAKERPDAEVTAVDISPEALAVARRNA  152 (275)
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence            45689999999999999999885  78889999998876654433

>TIGR02081 metW methionine biosynthesis protein MetW

Probab=82.76  E-value=2.9  Score=36.05  Aligned_cols=48  Identities=23%  Similarity=0.233  Sum_probs=36.4

Q ss_pred             HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHH
Q 023006          175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICS  227 (289)
Q Consensus       175 Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS  227 (289)
                      |++|.+.++     ...+||==|||.|+++..++.. +..+.|.|.|--|+...
T Consensus         4 ~~~i~~~i~-----~~~~iLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~i~~a   52 (194)
T TIGR02081         4 LESILNLIP-----PGSRVLDLGCGDGELLALLRDEKQVRGYGIEIDQDGVLAC   52 (194)
T ss_pred             HHHHHHhcC-----CCCEEEEeCCCCCHHHHHHHhccCCcEEEEeCCHHHHHHH
Confidence            445555544     2358999999999999999865 67778999998887543

This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized.

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=81.61  E-value=4  Score=35.94  Aligned_cols=55  Identities=15%  Similarity=-0.004  Sum_probs=40.0

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe---eeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI---SQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~---vqgNEfSy~MLLaS~FIL  231 (289)
                      ++..+.+.+..   ++..+||-=|||.|.++..||++.-.   +.+.|.+.-|+-..+-.+
T Consensus        65 ~~~~~~~~l~~---~~~~~VLDiG~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~  122 (215)
T TIGR00080        65 MVAMMTELLEL---KPGMKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRL  122 (215)
T ss_pred             HHHHHHHHhCC---CCcCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH
Confidence            34444444432   24569999999999999999988433   899999999986654444

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=81.08  E-value=7.1  Score=37.08  Aligned_cols=41  Identities=12%  Similarity=0.053  Sum_probs=35.2

Q ss_pred             CeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          191 PACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .+||=.|||.|.++..+|+.  +..+.+.|.|--|+-..+--.
T Consensus       135 ~~VLDlG~GsG~iai~la~~~p~~~V~avDis~~al~~A~~n~  177 (307)
T PRK11805        135 TRILDLCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEINI  177 (307)
T ss_pred             CEEEEEechhhHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence            58999999999999999987  578999999999987664443

>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase

Probab=80.67  E-value=3.1  Score=36.22  Aligned_cols=39  Identities=21%  Similarity=0.327  Sum_probs=34.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS  227 (289)
                      .+.+||-=|||.|.++..+|++  +..+.|.|.|.-|+-..
T Consensus        16 ~~~~ilDiGcG~G~~~~~la~~~p~~~v~gvD~~~~~l~~a   56 (194)
T TIGR00091        16 KAPLHLEIGCGKGRFLIDMAKQNPDKNFLGIEIHTPIVLAA   56 (194)
T ss_pred             CCceEEEeCCCccHHHHHHHHhCCCCCEEEEEeeHHHHHHH
Confidence            3468999999999999999998  57889999999998554

In E. coli, this protein flanks the DNA repair protein MutY, also called micA.

>PRK00811 spermidine synthase; Provisional

Probab=80.05  E-value=3.5  Score=38.47  Aligned_cols=42  Identities=17%  Similarity=0.199  Sum_probs=34.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CC-eeeeechhHHHHHHH-HHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICS-SFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf-~vqgNEfSy~MLLaS-~FI  230 (289)
                      ++.+||+=|||.|.++.++++. +. .++++|.+--|+=.. .|+
T Consensus        76 ~p~~VL~iG~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~  120 (283)
T PRK00811         76 NPKRVLIIGGGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYL  120 (283)
T ss_pred             CCCEEEEEecCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHh
Confidence            4568999999999999999987 54 678999999888544 443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	289
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.79
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	97.72
1wzn_A	252	SAM-dependent methyltransferase; structural genomi	97.34
1ri5_A	298	MRNA capping enzyme; methyltransferase, M7G, messe	97.06
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.97
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	96.85
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	96.74
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	96.74
1ve3_A	227	Hypothetical protein PH0226; dimer, riken structur	96.68
1ws6_A	171	Methyltransferase; structural genomics, riken stru	96.53
1y8c_A	246	S-adenosylmethionine-dependent methyltransferase;	96.48
3pfg_A	263	N-methyltransferase; N,N-dimethyltransferase, SAM	96.47
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	96.46
1wy7_A	207	Hypothetical protein PH1948; seven-stranded beta s	96.37
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	96.34
2p7i_A	250	Hypothetical protein; putative methyltransferase,	96.19
2esr_A	177	Methyltransferase; structural genomics, hypothetic	96.15
3thr_A	293	Glycine N-methyltransferase; GNMT, folate, methylt	96.14
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	96.13
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	96.13
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.08
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.06
3gdh_A	241	Trimethylguanosine synthase homolog; M7G, CAP, dim	96.02
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	96.01
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	96.01
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.97
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	95.89
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	95.88
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	95.84
2fhp_A	187	Methylase, putative; alpha-beta-alpha sandwich, st	95.82
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.77
3q87_B	170	N6 adenine specific DNA methylase; SAM-methyltrans	95.77
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.75
3lcc_A	235	Putative methyl chloride transferase; halide methy	95.72
3ofk_A	216	Nodulation protein S; NODS, N-methyltransferase, S	95.7
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	95.7
3dtn_A	234	Putative methyltransferase MM_2633; structural gen	95.69
1ne2_A	200	Hypothetical protein TA1320; structural genomics,	95.68
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	95.65
3cc8_A	230	Putative methyltransferase; structural genomics, j	95.65
3d2l_A	243	SAM-dependent methyltransferase; ZP_00538691.1, st	95.63
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.59
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.55
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.54
3bxo_A	239	N,N-dimethyltransferase; desosamine, sugar, carboh	95.51
3r0q_C	376	Probable protein arginine N-methyltransferase 4.2;	95.5
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.49
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.49
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	95.48
3g2m_A	299	PCZA361.24; SAM-dependent methyltransferase, glyco	95.47
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	95.44
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.41
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	95.41
3ege_A	261	Putative methyltransferase from antibiotic biosyn	95.4
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	95.4
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.39
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.39
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.37
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.37
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.36
1g6q_1	328	HnRNP arginine N-methyltransferase; SAM-binding do	95.35
1o9g_A	250	RRNA methyltransferase; antibiotic resistance, Se-	95.34
4dzr_A	215	Protein-(glutamine-N5) methyltransferase, release	95.34
2i62_A	265	Nicotinamide N-methyltransferase; structural genom	95.34
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.29
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.24
2ift_A	201	Putative methylase HI0767; NESG, Y767_haein, struc	95.21
2yxd_A	183	Probable cobalt-precorrin-6Y C(15)-methyltransfer	95.21
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.19
2fyt_A	340	Protein arginine N-methyltransferase 3; structural	95.05
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	94.96
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	94.91
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	94.9
2fpo_A	202	Methylase YHHF; structural genomics, putative meth	94.9
3jwh_A	217	HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena	94.87
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	94.84
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	94.8
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.76
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	94.73
3jwg_A	219	HEN1, methyltransferase type 12; 1.90A {Clostridiu	94.7
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.67
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	94.66
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	94.62
1qam_A	244	ERMC' methyltransferase; rRNA methyltransferase ER	94.56
3q7e_A	349	Protein arginine N-methyltransferase 1; HET: SAH;	94.5
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	94.42
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	94.41
1zq9_A	285	Probable dimethyladenosine transferase; SGC, struc	94.38
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	94.35
1xxl_A	239	YCGJ protein; structural genomics, protein structu	94.34
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	94.23
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	94.23
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	94.22
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	94.19
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	94.15
2y1w_A	348	Histone-arginine methyltransferase CARM1; histone	94.03
3i9f_A	170	Putative type 11 methyltransferase; structural gen	94.01
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	93.94
3ftd_A	249	Dimethyladenosine transferase; KSGA, rossmann-like	93.8
2frn_A	278	Hypothetical protein PH0793; structural genomics,	93.76
2h00_A	254	Methyltransferase 10 domain containing protein; st	93.71
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	93.71
3tm4_A	373	TRNA (guanine N2-)-methyltransferase TRM14; rossma	93.65
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	93.62
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	93.52
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	93.44
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	93.42
2p8j_A	209	S-adenosylmethionine-dependent methyltransferase;	93.36
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	93.35
3lpm_A	259	Putative methyltransferase; structural genomics, p	93.28
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	93.12
3gu3_A	284	Methyltransferase; alpha-beta protein, structural	92.99
3mq2_A	218	16S rRNA methyltransferase; methyltranferase, ribo	92.97
3tqs_A	255	Ribosomal RNA small subunit methyltransferase A; p	92.9
3gru_A	295	Dimethyladenosine transferase; rossman fold, ribos	92.89
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	92.86
1nv8_A	284	HEMK protein; class I adoMet-dependent methyltrans	92.7
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	92.68
2h1r_A	299	Dimethyladenosine transferase, putative; SGC toron	92.64
3tma_A	354	Methyltransferase; thump domain; 2.05A {Thermus th	92.63
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	92.63
2ih2_A	421	Modification methylase TAQI; DNA, DNA methyltransf	92.61
1jsx_A	207	Glucose-inhibited division protein B; methyltransf	92.56
2gs9_A	211	Hypothetical protein TT1324; methyl transferase, s	92.54
3fut_A	271	Dimethyladenosine transferase; methyltransferase,	92.36
3dmg_A	381	Probable ribosomal RNA small subunit methyltransf;	92.34
2b3t_A	276	Protein methyltransferase HEMK; translation termin	92.26
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	92.26
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	92.19
2zig_A	297	TTHA0409, putative modification methylase; methylt	92.17
1yub_A	245	Ermam, rRNA methyltransferase; MLS antibiotics; NM	92.1
2g72_A	289	Phenylethanolamine N-methyltransferase; HET: SAM F	91.94
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	91.93
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	91.87
3uzu_A	279	Ribosomal RNA small subunit methyltransferase A; s	91.67
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	91.57
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	91.51
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	91.5
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	91.47
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	91.44
3bzb_A	281	Uncharacterized protein; RED ALGA, protein structu	91.41
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	91.35
2igt_A	332	SAM dependent methyltransferase; alpha-beta sandwi	91.34
1vlm_A	219	SAM-dependent methyltransferase; possible histamin	91.19
2a14_A	263	Indolethylamine N-methyltransferase; SGC,INMT, str	91.16
3ckk_A	235	TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-	91.15
3bgv_A	313	MRNA CAP guanine-N7 methyltransferase; alternative	91.13
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	91.09
2f8l_A	344	Hypothetical protein LMO1582; structural genomics,	91.02
2r6z_A	258	UPF0341 protein in RSP 3' region; alpha-beta prote	90.96
2vdw_A	302	Vaccinia virus capping enzyme D1 subunit; nucleoti	90.86
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	90.83
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	90.73
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	90.73
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	90.68
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	90.67
3opn_A	232	Putative hemolysin; structural genomics, PSI-2, pr	90.34
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	90.28
1af7_A	274	Chemotaxis receptor methyltransferase CHER; chemot	90.27
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	90.2
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	89.64
3b3j_A	480	Histone-arginine methyltransferase CARM1; protein	89.63
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	89.51
2pjd_A	343	Ribosomal RNA small subunit methyltransferase C; g	89.46
2vdv_E	246	TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl	89.42
4dcm_A	375	Ribosomal RNA large subunit methyltransferase G; 2	89.31
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	89.17
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	89.15
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	89.12
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	88.65
3bkx_A	275	SAM-dependent methyltransferase; YP_807781.1, cycl	88.59
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	88.46
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	87.8
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	87.63
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	87.63
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	87.62
2zfu_A	215	Nucleomethylin, cerebral protein 1; nucleolar prot	87.56
2okc_A	445	Type I restriction enzyme stysji M protein; NP_813	87.28
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	86.85
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	86.8
2r3s_A	335	Uncharacterized protein; methyltransferase domain,	86.7
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	86.69
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	86.51
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	86.33
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	86.32
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	86.02
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	85.93
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	85.69
2b25_A	336	Hypothetical protein; structural genomics, methyl	85.65
2i7c_A	283	Spermidine synthase; transferase, structural genom	85.22
3p2e_A	225	16S rRNA methylase; methyltransferase, transferase	85.08
2o07_A	304	Spermidine synthase; structural genomics, structur	85.04
3k6r_A	278	Putative transferase PH0793; structural genomics,	85.0
2as0_A	396	Hypothetical protein PH1915; RNA methyltransferase	84.94
3ldu_A	385	Putative methylase; structural genomics, PSI-2, pr	84.91
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	84.64
1uwv_A	433	23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m	84.63
3k0b_A	393	Predicted N6-adenine-specific DNA methylase; methy	84.42
2pt6_A	321	Spermidine synthase; transferase, structural genom	84.42
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	84.21
2jjq_A	425	Uncharacterized RNA methyltransferase pyrab10780;	84.07
3fzg_A	200	16S rRNA methylase; methyltransferase, plasmid, tr	84.05
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	83.74
2b78_A	385	Hypothetical protein SMU.776; structure genomics,	83.49
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	83.16
3htx_A	950	HEN1; HEN1, small RNA methyltransferase, protein-R	83.13
1qyr_A	252	KSGA, high level kasugamycin resistance protein, S	83.08
3ocj_A	305	Putative exported protein; structural genomics, PS	82.88
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	82.86
3ldg_A	384	Putative uncharacterized protein SMU.472; YPSC, me	82.44
3a27_A	272	TYW2, uncharacterized protein MJ1557; wybutosine m	81.84
2oyr_A	258	UPF0341 protein YHIQ; alpha-beta protein, structur	81.52
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	80.95
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	80.88
3hp7_A	291	Hemolysin, putative; structural genomics, APC64019	80.62

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.79  E-value=1.1e-05  Score=67.79  Aligned_cols=40  Identities=23%  Similarity=0.122  Sum_probs=36.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||.+|||.|+++..||++|+.|.|.|+|--|+-..+
T Consensus        22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~   61 (203)
T 1pjz_A           22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYF   61 (203)
T ss_dssp             TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHH
T ss_pred             CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            4568999999999999999999999999999999987554

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=97.72  E-value=2.3e-05  Score=69.32  Aligned_cols=39  Identities=18%  Similarity=-0.010  Sum_probs=35.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+||.+|||.|+++..||++|+.|+|.|+|--|+-..
T Consensus        68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a  106 (252)
T 2gb4_A           68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREF  106 (252)
T ss_dssp             CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            456999999999999999999999999999999998654

>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=97.34  E-value=0.00025  Score=59.89  Aligned_cols=41  Identities=20%  Similarity=0.212  Sum_probs=36.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||-.|||.|+++..++++|+.+.|.|.|--|+-..+-
T Consensus        41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~   81 (252)
T 1wzn_A           41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARR   81 (252)
T ss_dssp             CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            45699999999999999999999999999999999876543

>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*

Probab=97.06  E-value=0.00076  Score=57.85  Aligned_cols=85  Identities=16%  Similarity=0.149  Sum_probs=41.4

Q ss_pred             chHHHHHHHhhhhhcCCcCChHHHhhh--------hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-ee
Q 023006          144 DVDKVRCIIRNIVRDWAAEGKTERDQC--------YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-IS  214 (289)
Q Consensus       144 D~dKV~stLkq~vRDWS~EG~~ERd~~--------y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~v  214 (289)
                      .|++....+..++..+..++..+|...        ...+...|...+.    .+..+||-.|||.|+++..+++.|+ .+
T Consensus        15 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v   90 (298)
T 1ri5_A           15 AMEGKKEEIREHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLYT----KRGDSVLDLGCGKGGDLLKYERAGIGEY   90 (298)
T ss_dssp             --------------------------CCSHHHHHHHHHHHHHHHHHHC----CTTCEEEEETCTTTTTHHHHHHHTCSEE
T ss_pred             hhhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHhC----CCCCeEEEECCCCCHHHHHHHHCCCCEE
Confidence            345555556666666665555555431        1223333333221    2456899999999999999999998 89


Q ss_pred             eeechhHHHHHHHHHHhh
Q 023006          215 QGNEFSYYMMICSSFILN  232 (289)
Q Consensus       215 qgNEfSy~MLLaS~FILN  232 (289)
                      .|.|.|--|+-..+-.+.
T Consensus        91 ~gvD~s~~~~~~a~~~~~  108 (298)
T 1ri5_A           91 YGVDIAEVSINDARVRAR  108 (298)
T ss_dssp             EEEESCHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHH
Confidence            999999999876654443

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.97  E-value=0.0011  Score=54.10  Aligned_cols=40  Identities=18%  Similarity=0.007  Sum_probs=36.0

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+||--|||.|+++..++++|..+.|.|.|-.|+-..+-
T Consensus        47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~   86 (218)
T 3ou2_A           47 RGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR   86 (218)
T ss_dssp             CSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG
T ss_pred             CCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence            4599999999999999999999999999999999876544

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=96.85  E-value=0.0041  Score=53.39  Aligned_cols=79  Identities=16%  Similarity=0.061  Sum_probs=57.7

Q ss_pred             CchHHHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHH
Q 023006          143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY  222 (289)
Q Consensus       143 ~D~dKV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~  222 (289)
                      .+....-+.+...+..|....  .....+..+.+.|.++++     +..+||--|||.|+++..++++|+.+.|.|.|--
T Consensus        15 ~~~~~~~~~~a~~Yd~~~~~~--~~~~~~~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~   87 (260)
T 2avn_A           15 LRSWEFYDRIARAYDSMYETP--KWKLYHRLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKE   87 (260)
T ss_dssp             CCHHHHHHHHHHHHGGGGCSH--HHHHHHHHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHH
T ss_pred             hhhcchhhHHHHHHHHhcccc--chhHHHHHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHH
Confidence            444556666666766666321  112344567777777765     3458999999999999999999999999999999


Q ss_pred             HHHHHH
Q 023006          223 MMICSS  228 (289)
Q Consensus       223 MLLaS~  228 (289)
                      |+-..+
T Consensus        88 ~l~~a~   93 (260)
T 2avn_A           88 MLEVAR   93 (260)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            986543

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=96.74  E-value=0.002  Score=53.68  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=46.7

Q ss_pred             HHHHHhhhhhcCCcCChHH-HhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHH
Q 023006          148 VRCIIRNIVRDWAAEGKTE-RDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC  226 (289)
Q Consensus       148 V~stLkq~vRDWS~EG~~E-Rd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLa  226 (289)
                      +...-......|....... .......+++.|.++++     +..+||--|||.|+++..+++.|..+.|.|.|-.|+-.
T Consensus        16 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~   90 (242)
T 3l8d_A           16 AEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQK   90 (242)
T ss_dssp             ----------------CHHHHTSTTTTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             HHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            3333344444455432221 11233467888888765     34589999999999999999999999999999998865


Q ss_pred             HH
Q 023006          227 SS  228 (289)
Q Consensus       227 S~  228 (289)
                      .+
T Consensus        91 a~   92 (242)
T 3l8d_A           91 GK   92 (242)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=96.74  E-value=0.0026  Score=51.60  Aligned_cols=56  Identities=18%  Similarity=0.214  Sum_probs=45.1

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+.+.|.++++     ...+||-.|||.|+++..+++.|+ .+.|.|.|-.|+-..+-.+
T Consensus        29 ~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~   85 (215)
T 2pxx_A           29 FSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACY   85 (215)
T ss_dssp             HHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhc
Confidence            4457777777652     456899999999999999999998 8999999999987655433

>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=96.68  E-value=0.0061  Score=50.09  Aligned_cols=67  Identities=15%  Similarity=0.150  Sum_probs=52.5

Q ss_pred             cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       158 DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +|+.....+.......+++.|.+.++.     ..+||-.|||.|+++..++++|..+.|.|.|-.|+-..+-
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~   78 (227)
T 1ve3_A           12 TYTDINSQEYRSRIETLEPLLMKYMKK-----RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKARE   78 (227)
T ss_dssp             TTTCTTSHHHHHHHHHHHHHHHHSCCS-----CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             hhhcccHHHHHHHHHHHHHHHHHhcCC-----CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            455555555555667788888887653     4689999999999999999999999999999988865543

>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46

Probab=96.53  E-value=0.0073  Score=47.31  Aligned_cols=40  Identities=23%  Similarity=0.055  Sum_probs=35.5

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+||-.|||.|+++..+++.|..+.|.|.|--|+-..+-
T Consensus        42 ~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~   81 (171)
T 1ws6_A           42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKE   81 (171)
T ss_dssp             CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred             CCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            4589999999999999999999999999999998866543

>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43

Probab=96.48  E-value=0.0041  Score=51.46  Aligned_cols=42  Identities=14%  Similarity=-0.039  Sum_probs=36.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||-.|||.|+++..++++|..+.|.|.|--|+-..+-.
T Consensus        37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~   78 (246)
T 1y8c_A           37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENK   78 (246)
T ss_dssp             CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHH
Confidence            456999999999999999999999999999999998665433

>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*

Probab=96.47  E-value=0.0088  Score=50.94  Aligned_cols=53  Identities=15%  Similarity=0.056  Sum_probs=43.8

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+++.|....|     +..+||--|||.|+++..++++|..+.|.|.|--|+-..+-
T Consensus        38 ~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~   90 (263)
T 3pfg_A           38 ADLAALVRRHSP-----KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARR   90 (263)
T ss_dssp             HHHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhhCC-----CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence            356777777654     34689999999999999999999999999999999865543

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=96.46  E-value=0.0056  Score=50.33  Aligned_cols=73  Identities=18%  Similarity=0.121  Sum_probs=50.9

Q ss_pred             HHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHH
Q 023006          147 KVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC  226 (289)
Q Consensus       147 KV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLa  226 (289)
                      .+..........|......      .+.+..+...++     +..+||--|||.|+++..++++|..+.|.|.|--|+-.
T Consensus        12 ~~~~~~~~~~~~y~~~~~~------~~~~~~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~   80 (211)
T 3e23_A           12 DTLRFYRGNATAYAERQPR------SATLTKFLGELP-----AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAE   80 (211)
T ss_dssp             HHHHHHHHSHHHHTTCCCC------CHHHHHHHTTSC-----TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccch------hHHHHHHHHhcC-----CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHH
Confidence            4444455555555543333      234444544443     34689999999999999999999999999999998866


Q ss_pred             HHHH
Q 023006          227 SSFI  230 (289)
Q Consensus       227 S~FI  230 (289)
                      .+-.
T Consensus        81 a~~~   84 (211)
T 3e23_A           81 ASRR   84 (211)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            5443

>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32

Probab=96.37  E-value=0.0047  Score=50.66  Aligned_cols=43  Identities=21%  Similarity=-0.004  Sum_probs=36.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||=.|||.|.++..+|+.|.. +.|.|.|-.|+-..+-.+
T Consensus        49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~   92 (207)
T 1wy7_A           49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENL   92 (207)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHT
T ss_pred             CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999999884 899999999986655443

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=96.34  E-value=0.0077  Score=49.03  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=52.3

Q ss_pred             HHHHHHHhhhhhcCCcC----ChHHHh-hhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechh
Q 023006          146 DKVRCIIRNIVRDWAAE----GKTERD-QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFS  220 (289)
Q Consensus       146 dKV~stLkq~vRDWS~E----G~~ERd-~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfS  220 (289)
                      +++.+........|...    ....|. .....+++.+...       .+.+||--|||.|+++..++++|..+.|.|.|
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s   83 (227)
T 3e8s_A           11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGR-------QPERVLDLGCGEGWLLRALADRGIEAVGVDGD   83 (227)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHT-------CCSEEEEETCTTCHHHHHHHTTTCEEEEEESC
T ss_pred             HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcC-------CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC
Confidence            45666666666666542    112221 1223355555442       34689999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 023006          221 YYMMICSS  228 (289)
Q Consensus       221 y~MLLaS~  228 (289)
                      -.|+-..+
T Consensus        84 ~~~~~~a~   91 (227)
T 3e8s_A           84 RTLVDAAR   91 (227)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99886544

>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A

Probab=96.19  E-value=0.0077  Score=49.61  Aligned_cols=54  Identities=13%  Similarity=-0.002  Sum_probs=44.8

Q ss_pred             hhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       169 ~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+..+++.|....+      ..+||--|||.|+++..++++|..+.|.|.|--|+-..+
T Consensus        28 ~~~~~~~~~l~~~~~------~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~   81 (250)
T 2p7i_A           28 VMHPFMVRAFTPFFR------PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQ   81 (250)
T ss_dssp             THHHHHHHHHGGGCC------SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHH
T ss_pred             hHHHHHHHHHHhhcC------CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHH
Confidence            456778888876543      346999999999999999999999999999999986554

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=96.15  E-value=0.013  Score=46.73  Aligned_cols=43  Identities=21%  Similarity=0.001  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||-.|||.|+++..++++|. .+.|.|.|--|+-..+-.+
T Consensus        31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~   74 (177)
T 2esr_A           31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNI   74 (177)
T ss_dssp             CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH
Confidence            346899999999999999999975 8899999999886654433

>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*

Probab=96.14  E-value=0.021  Score=49.26  Aligned_cols=69  Identities=14%  Similarity=0.069  Sum_probs=50.7

Q ss_pred             HHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          148 VRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       148 V~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .......+..+|....+.-|+    .|++.|...       +..+||=-|||.|+++..++.+|+.+.|.|.|--|+-..
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~----~l~~~l~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a   95 (293)
T 3thr_A           27 AARVWQLYIGDTRSRTAEYKA----WLLGLLRQH-------GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA   95 (293)
T ss_dssp             HHHHHHHHHTCCSCBCHHHHH----HHHHHHHHT-------TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHhcCcchHHHHHH----HHHHHhccc-------CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence            334455666777665554442    344444431       346899999999999999999999999999999998655

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=96.13  E-value=0.02  Score=49.44  Aligned_cols=43  Identities=19%  Similarity=0.162  Sum_probs=38.0

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhh
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +.+||--|||.|+++..+++.|..+.|.|.|--|+-..+-.+.
T Consensus        69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~  111 (285)
T 4htf_A           69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAE  111 (285)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999876655443

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=96.13  E-value=0.0085  Score=48.07  Aligned_cols=41  Identities=22%  Similarity=0.217  Sum_probs=36.1

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +.+||-.|||.|+++..+++.|+.+.|.|.|--|+-..+-.
T Consensus        33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~   73 (199)
T 2xvm_A           33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERI   73 (199)
T ss_dssp             SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            45999999999999999999999999999999988665433

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.08  E-value=0.013  Score=48.19  Aligned_cols=54  Identities=28%  Similarity=0.202  Sum_probs=43.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .|..+++.|...       +..+||--|||.|+++..++++|..+.|.|.|--|+-..+-.
T Consensus        33 ~~~~~l~~~~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~   86 (220)
T 3hnr_A           33 HYEDILEDVVNK-------SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEK   86 (220)
T ss_dssp             THHHHHHHHHHT-------CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             HHHHHHHHhhcc-------CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence            445566666542       456899999999999999999999999999999998655443

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.06  E-value=0.011  Score=49.22  Aligned_cols=59  Identities=15%  Similarity=-0.007  Sum_probs=46.3

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ....+++.+.+.+..   .+..+||--|||.|.++..+++.|..+.|.|.|--|+-..+-.+
T Consensus        54 ~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~  112 (231)
T 1vbf_A           54 TALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLL  112 (231)
T ss_dssp             CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHH
Confidence            344566666666543   24569999999999999999999999999999999987665444

>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*

Probab=96.02  E-value=0.023  Score=47.74  Aligned_cols=41  Identities=7%  Similarity=0.004  Sum_probs=36.6

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||=.|||.|+++..+|+.|..+.|.|.|--|+-..+-.
T Consensus        79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~  119 (241)
T 3gdh_A           79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNN  119 (241)
T ss_dssp             CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence            45899999999999999999999999999999998766543

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=96.01  E-value=0.005  Score=50.18  Aligned_cols=39  Identities=23%  Similarity=0.261  Sum_probs=35.2

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||--|||.|+++..++.+|+.+.|.|.|--|+-..+
T Consensus        42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~   80 (203)
T 3h2b_A           42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELAR   80 (203)
T ss_dssp             CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHH
T ss_pred             CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            457999999999999999999999999999999886544

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=96.01  E-value=0.015  Score=47.10  Aligned_cols=58  Identities=22%  Similarity=0.302  Sum_probs=45.2

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHhh
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      |..+++.|.+.++..   .. +||-.|||.|+++..++++ |..+.|.|.|--|+-..+-.+.
T Consensus        29 ~~~~~~~~~~~~~~~---~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~   87 (219)
T 3dlc_A           29 YPIIAENIINRFGIT---AG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIA   87 (219)
T ss_dssp             HHHHHHHHHHHHCCC---EE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhcCCC---CC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHH
Confidence            455667776665532   23 9999999999999999998 8899999999999876654443

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.97  E-value=0.013  Score=49.13  Aligned_cols=60  Identities=18%  Similarity=0.207  Sum_probs=46.7

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .+..+++.|.......  .+..+||--|||.|+++..++++|..+.|.|.|--|+-..+-.+
T Consensus        22 ~~~~~~~~l~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~   81 (263)
T 2yqz_A           22 VAGQIATAMASAVHPK--GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI   81 (263)
T ss_dssp             HHHHHHHHHHHHCCCS--SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhcCC--CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4667777775532211  24568999999999999999999999999999999987665443

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=95.89  E-value=0.013  Score=50.69  Aligned_cols=53  Identities=21%  Similarity=0.234  Sum_probs=42.8

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+++.+...       ...+||-.|||.|+++..+|++|+.+.|.|.|-.|+-..+-.+
T Consensus       110 ~~~~~~~~~~-------~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~  162 (286)
T 3m70_A          110 GDVVDAAKII-------SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETK  162 (286)
T ss_dssp             HHHHHHHHHS-------CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHhhcc-------CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Confidence            3466666542       3568999999999999999999999999999999987655443

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=95.88  E-value=0.014  Score=49.25  Aligned_cols=54  Identities=20%  Similarity=0.242  Sum_probs=42.9

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ....|.+.++..   +..+||--|||.|+++..+++.|. .+.|.|.|--|+-..+-.
T Consensus        32 ~~~~l~~~~~~~---~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~   86 (253)
T 3g5l_A           32 EWHELKKMLPDF---NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRK   86 (253)
T ss_dssp             HHHHHHTTCCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred             hHHHHHHhhhcc---CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHh
Confidence            344556665532   567999999999999999999999 899999999998765443

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=95.84  E-value=0.039  Score=45.14  Aligned_cols=54  Identities=19%  Similarity=0.179  Sum_probs=43.4

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+++.|....+     +..+||-.|||.|+++..+++.|. .+.|.|.|--|+-..+-.
T Consensus        48 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~  102 (205)
T 3grz_A           48 QLAMLGIERAMV-----KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEEN  102 (205)
T ss_dssp             HHHHHHHHHHCS-----SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence            457777777643     346899999999999999999988 889999999997655433

>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46

Probab=95.82  E-value=0.03  Score=44.52  Aligned_cols=41  Identities=22%  Similarity=0.049  Sum_probs=34.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||-.|||.|.++.++++.| -.+.|.|.|-.|+-..+-
T Consensus        44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~   85 (187)
T 2fhp_A           44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKE   85 (187)
T ss_dssp             SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence            34589999999999999999987 478999999988865543

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.77  E-value=0.012  Score=47.88  Aligned_cols=39  Identities=21%  Similarity=0.175  Sum_probs=35.1

Q ss_pred             eEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          192 ACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       192 rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +||-.|||.|+++..+++.|+.+.|.|.|--|+-..+-.
T Consensus        32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~   70 (202)
T 2kw5_A           32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQL   70 (202)
T ss_dssp             EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            899999999999999999999999999999987655433

>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}

Probab=95.77  E-value=0.012  Score=47.81  Aligned_cols=47  Identities=9%  Similarity=0.100  Sum_probs=38.5

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC  226 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLa  226 (289)
                      +++.|...-     .+..+||=.|||.|+++..+|++| .+.|.|.|--|+-.
T Consensus        13 l~~~l~~~~-----~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~   59 (170)
T 3q87_B           13 LMDALEREG-----LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES   59 (170)
T ss_dssp             HHHHHHHHT-----CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT
T ss_pred             HHHHHHhhc-----CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc
Confidence            566655431     123489999999999999999999 99999999999876

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.75  E-value=0.028  Score=44.41  Aligned_cols=55  Identities=9%  Similarity=-0.031  Sum_probs=42.4

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+.|.+.++..   +..+||-.|||.|+++..+++.|..+.|.|.|--|+-..+-.+
T Consensus        40 ~~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~   94 (194)
T 1dus_A           40 GTKILVENVVVD---KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENI   94 (194)
T ss_dssp             HHHHHHHHCCCC---TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHcccC---CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH
Confidence            444444444322   4568999999999999999999999999999999887665444

>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}

Probab=95.72  E-value=0.012  Score=49.35  Aligned_cols=40  Identities=20%  Similarity=0.203  Sum_probs=35.6

Q ss_pred             CeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .+||-.|||.|+++..+|+.|+.+.|.|.|--|+-..+-.
T Consensus        68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~  107 (235)
T 3lcc_A           68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANET  107 (235)
T ss_dssp             EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            4999999999999999999999999999999998655443

>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*

Probab=95.70  E-value=0.014  Score=47.89  Aligned_cols=43  Identities=7%  Similarity=-0.138  Sum_probs=37.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|+++..++++|..+.|.|.|-.|+-..+-.+
T Consensus        51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~   93 (216)
T 3ofk_A           51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRT   93 (216)
T ss_dssp             SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHT
T ss_pred             CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhc
Confidence            4568999999999999999999999999999999987665444

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=95.70  E-value=0.016  Score=48.66  Aligned_cols=55  Identities=11%  Similarity=-0.104  Sum_probs=42.3

Q ss_pred             HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       175 Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .+.+..+.+..  ....+||--|||.|+++..||+.|..+.|.|.|--|+-..+-.+
T Consensus        44 ~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~   98 (245)
T 3ggd_A           44 VVDLPRFELLF--NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN   98 (245)
T ss_dssp             HHHHHHHTTTS--CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS
T ss_pred             HHHHHHHhhcc--CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC
Confidence            34445544432  24568999999999999999999999999999999986654433

>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}

Probab=95.69  E-value=0.023  Score=47.25  Aligned_cols=59  Identities=15%  Similarity=0.063  Sum_probs=45.8

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      |..+++.+.+.++.  ..++.+||--|||.|+++..+++.  |..+.|.|.|--|+-..+-.+
T Consensus        28 ~~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~   88 (234)
T 3dtn_A           28 FDDFYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF   88 (234)
T ss_dssp             HHHHHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh
Confidence            34455666666653  235689999999999999999998  899999999999986654433

>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32

Probab=95.68  E-value=0.012  Score=48.22  Aligned_cols=42  Identities=17%  Similarity=0.056  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~FI  230 (289)
                      ...+||-.|||.|.++..+++.|.. +.|.|.|-.|+-..+-.
T Consensus        51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~   93 (200)
T 1ne2_A           51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRN   93 (200)
T ss_dssp             BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHh
Confidence            4568999999999999999999984 99999999998765543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=95.65  E-value=0.044  Score=44.88  Aligned_cols=56  Identities=16%  Similarity=0.049  Sum_probs=44.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .++..+.+.+..   ++..+||--|||.|.++..+|++|..+.+.|.|--|+-..+-.+
T Consensus        64 ~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~  119 (210)
T 3lbf_A           64 YMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRL  119 (210)
T ss_dssp             HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHH
Confidence            455556555543   24678999999999999999999999999999999986654433

>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}

Probab=95.65  E-value=0.0075  Score=49.22  Aligned_cols=52  Identities=17%  Similarity=0.014  Sum_probs=42.0

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+.+.|.+.++    .+..+||-.|||.|+++..+++.|..+.|.|.|--|+-..+
T Consensus        20 ~~~~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~   71 (230)
T 3cc8_A           20 AVNPNLLKHIK----KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAK   71 (230)
T ss_dssp             CCCHHHHTTCC----TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            34555666665    24579999999999999999999999999999998875443

>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}

Probab=95.63  E-value=0.024  Score=47.04  Aligned_cols=54  Identities=15%  Similarity=0.085  Sum_probs=44.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .|..+++.|.++++.     ..+||--|||.|+++..+++. ..+.|.|.|--|+-..+-
T Consensus        19 ~~~~~~~~~~~~~~~-----~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~   72 (243)
T 3d2l_A           19 PYPEWVAWVLEQVEP-----GKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQE   72 (243)
T ss_dssp             CHHHHHHHHHHHSCT-----TCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCC-----CCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHH
Confidence            456677788887653     358999999999999999999 899999999999866543

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.59  E-value=0.054  Score=42.65  Aligned_cols=43  Identities=14%  Similarity=0.074  Sum_probs=36.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||..|||.|.++..+++.+..+.+.|.|..|+-..+-.+
T Consensus        33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~   75 (192)
T 1l3i_A           33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNL   75 (192)
T ss_dssp             TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999999988999999998887654433

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.55  E-value=0.013  Score=47.14  Aligned_cols=43  Identities=12%  Similarity=-0.065  Sum_probs=37.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|+++..+|++|..+.|.|.|--|+-..+-.+
T Consensus        22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~   64 (185)
T 3mti_A           22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRL   64 (185)
T ss_dssp             TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999986654433

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.54  E-value=0.005  Score=53.21  Aligned_cols=40  Identities=23%  Similarity=0.221  Sum_probs=36.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||--|||.|+++..+++.|..+.|.|.|--|+-..+
T Consensus        57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~   96 (279)
T 3ccf_A           57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKAR   96 (279)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4568999999999999999999999999999999987654

>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}

Probab=95.51  E-value=0.029  Score=46.34  Aligned_cols=52  Identities=17%  Similarity=0.072  Sum_probs=42.6

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .+++.|..+.+     +..+||--|||.|+++..+++.|..+.|.|.|--|+-..+-
T Consensus        29 ~~~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~   80 (239)
T 3bxo_A           29 DIADLVRSRTP-----EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARK   80 (239)
T ss_dssp             HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhcC-----CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHH
Confidence            46666666552     34689999999999999999999899999999999876543

>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}

Probab=95.50  E-value=0.04  Score=51.06  Aligned_cols=42  Identities=21%  Similarity=0.147  Sum_probs=35.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|.|+..+|++|. .+.|.|.| -|+-..+-.+
T Consensus        63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~  105 (376)
T 3r0q_C           63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALV  105 (376)
T ss_dssp             TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHH
T ss_pred             CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHH
Confidence            456899999999999999999998 89999999 7775554443

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.49  E-value=0.057  Score=45.31  Aligned_cols=58  Identities=14%  Similarity=0.126  Sum_probs=44.9

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .+..+++.|.+.++.   .+..+||--|||.|.++..+|+. |..+.|.|.|--|+-..+-.
T Consensus        20 ~~~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~   78 (256)
T 1nkv_A           20 FTEEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRR   78 (256)
T ss_dssp             CCHHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            344566666666543   24568999999999999999987 89999999999998766433

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.49  E-value=0.018  Score=47.28  Aligned_cols=44  Identities=18%  Similarity=0.291  Sum_probs=38.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +..+||-.|||.|+++..++++|..+.|.|.|-.|+-..+-.+.
T Consensus        30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~   73 (235)
T 3sm3_A           30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAAR   73 (235)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT
T ss_pred             CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999877665544

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=95.48  E-value=0.0096  Score=50.89  Aligned_cols=52  Identities=17%  Similarity=0.237  Sum_probs=41.4

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+.+.|..+++    ....+||.-|||.|.++..+++.  |..+.|.|.|-.|+-...
T Consensus        73 ~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~  126 (269)
T 1p91_A           73 AIVAQLRERLD----DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA  126 (269)
T ss_dssp             HHHHHHHHHSC----TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHhcC----CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHH
Confidence            35555555554    24568999999999999999997  899999999999986554

>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*

Probab=95.47  E-value=0.014  Score=51.14  Aligned_cols=53  Identities=21%  Similarity=0.201  Sum_probs=41.3

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +.+..|.+.++..    +.+||--|||.|+++..|+++|+.+.|.|.|--|+-..+=
T Consensus        70 ~~~~~~~~~~~~~----~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~  122 (299)
T 3g2m_A           70 SEAREFATRTGPV----SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRK  122 (299)
T ss_dssp             HHHHHHHHHHCCC----CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhhCCC----CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            4444555544422    2389999999999999999999999999999999876543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=95.44  E-value=0.023  Score=44.86  Aligned_cols=43  Identities=16%  Similarity=-0.082  Sum_probs=36.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||.-|||.|+++..+|+.  |..+.|.|.|-.|+-..+-.+
T Consensus        25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~   69 (178)
T 3hm2_A           25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA   69 (178)
T ss_dssp             TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH
Confidence            4568999999999999999998  789999999999887665443

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.41  E-value=0.023  Score=51.16  Aligned_cols=40  Identities=20%  Similarity=-0.005  Sum_probs=36.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||==|||.|+++..+|++|+.|.|.|.|--|+-..+
T Consensus        45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar   84 (261)
T 3iv6_A           45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLA   84 (261)
T ss_dssp             TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHH
Confidence            4568999999999999999999999999999999996554

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=95.41  E-value=0.075  Score=46.67  Aligned_cols=57  Identities=12%  Similarity=-0.033  Sum_probs=43.8

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHhh
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      ..++.|.+.++.   .+..+||--|||.|.++..+|+. |..+.|.|.|--|+-..+-.+.
T Consensus        77 ~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~  134 (318)
T 2fk8_A           77 AKVDLNLDKLDL---KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLA  134 (318)
T ss_dssp             HHHHHHHTTSCC---CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC---CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            345555554432   24568999999999999999988 9999999999999876654443

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=95.40  E-value=0.02  Score=49.18  Aligned_cols=51  Identities=20%  Similarity=0.182  Sum_probs=42.2

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      ..+.+.|.+.++.   .+..+||--|||.|+++..+++.|..+.|.|.|--|+-
T Consensus        20 ~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~   70 (261)
T 3ege_A           20 IRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQ   70 (261)
T ss_dssp             HHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHH
T ss_pred             HHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            4566677666653   24579999999999999999999999999999998765

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=95.40  E-value=0.014  Score=47.43  Aligned_cols=53  Identities=21%  Similarity=-0.018  Sum_probs=40.5

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~F  229 (289)
                      .+++.|....+    .+..+||=.|||.|.++.+++++|. .+.|.|.|--|+-..+-
T Consensus        32 ~l~~~l~~~~~----~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~   85 (189)
T 3p9n_A           32 SLFNIVTARRD----LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIAR   85 (189)
T ss_dssp             HHHHHHHHHSC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHH
T ss_pred             HHHHHHHhccC----CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHH
Confidence            35555555432    1346899999999999999999987 58999999998866543

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.39  E-value=0.022  Score=47.96  Aligned_cols=53  Identities=19%  Similarity=0.157  Sum_probs=42.0

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .+.+.+..+++..  .+..+||--|||.|+++..+++.|..+.|.|.|--|+-..
T Consensus        27 ~~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a   79 (240)
T 3dli_A           27 LVKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFC   79 (240)
T ss_dssp             HHHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHH
T ss_pred             HHHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            4555665555432  2456899999999999999999999999999999887653

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.39  E-value=0.034  Score=46.07  Aligned_cols=50  Identities=20%  Similarity=0.218  Sum_probs=40.0

Q ss_pred             HHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHH
Q 023006          177 ELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       177 ~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~F  229 (289)
                      .|.++++..   ...+||--|||.|+++..++++|. .+.|.|.|--|+-..+-
T Consensus        34 ~l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~   84 (243)
T 3bkw_A           34 ALRAMLPEV---GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARA   84 (243)
T ss_dssp             HHHHHSCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred             HHHHhcccc---CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence            344555432   356899999999999999999999 89999999998876543

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.37  E-value=0.04  Score=46.17  Aligned_cols=52  Identities=15%  Similarity=0.162  Sum_probs=40.8

Q ss_pred             HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHH
Q 023006          175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       175 Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ++.+.+.++   ..+..+||--|||.|+++..+|+. |..+.|.|.|--|+-..+-
T Consensus        44 ~~~~~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~   96 (266)
T 3ujc_A           44 TKKILSDIE---LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANE   96 (266)
T ss_dssp             HHHHTTTCC---CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHhcC---CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            344444443   235669999999999999999998 9999999999998876543

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.37  E-value=0.023  Score=44.98  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||-.|||.|+++..+++.|..+.|.|.|-.|+-..+-
T Consensus        46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~   86 (195)
T 3cgg_A           46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQ   86 (195)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence            34689999999999999999999999999999988765543

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.36  E-value=0.015  Score=48.82  Aligned_cols=51  Identities=18%  Similarity=0.069  Sum_probs=40.1

Q ss_pred             HHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       175 Le~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...|.+.++.   ....+||--|||.|.++..++++  |..+.|.|.|--|+-..+
T Consensus        22 ~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~   74 (259)
T 2p35_A           22 ARDLLAQVPL---ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAA   74 (259)
T ss_dssp             HHHHHTTCCC---SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHH
T ss_pred             HHHHHHhcCC---CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence            3344444442   24568999999999999999998  899999999999986554

>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6

Probab=95.35  E-value=0.05  Score=49.24  Aligned_cols=57  Identities=23%  Similarity=0.296  Sum_probs=40.2

Q ss_pred             HHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       165 ~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      ..|...|...+.......      +..+||--|||.|.|+..+|++|. .+.|.|.| -|+-..+
T Consensus        20 ~~r~~~y~~ai~~~~~~~------~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~   77 (328)
T 1g6q_1           20 TVRTLSYRNAIIQNKDLF------KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAK   77 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHH------TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHH
T ss_pred             HHHHHHHHHHHHhhHhhc------CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHH
Confidence            345555544443333332      345899999999999999999997 78999999 5655443

>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A

Probab=95.34  E-value=0.026  Score=48.16  Aligned_cols=40  Identities=15%  Similarity=0.064  Sum_probs=35.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh----CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~----Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||=+|||.|.++.+++++    +..+.|.|.|-.|+-..+
T Consensus        51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~   94 (250)
T 1o9g_A           51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAA   94 (250)
T ss_dssp             SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHH
T ss_pred             CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHH
Confidence            4579999999999999999987    678999999999986665

>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}

Probab=95.34  E-value=0.019  Score=46.36  Aligned_cols=39  Identities=21%  Similarity=0.275  Sum_probs=29.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS  227 (289)
                      +..+||-+|||.|.++..+|++  +..+.|.|.|-.|+-..
T Consensus        30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a   70 (215)
T 4dzr_A           30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVA   70 (215)
T ss_dssp             TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------
T ss_pred             CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence            4679999999999999999999  67889999999887544

>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*

Probab=95.34  E-value=0.0063  Score=51.18  Aligned_cols=59  Identities=14%  Similarity=0.030  Sum_probs=43.2

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+..|...+.. ...+..+||--|||.|+++..+|+.|+ .+.|.|+|--|+-..+-.+
T Consensus        40 ~~~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~   99 (265)
T 2i62_A           40 RHLLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWL   99 (265)
T ss_dssp             HHHHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred             HhhHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHH
Confidence            3344444444322 223456899999999999999999999 8999999999986654333

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.29  E-value=0.036  Score=54.22  Aligned_cols=40  Identities=20%  Similarity=0.243  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+.|||==|||.|.|+-.+|++|+.|+|.|.|--|+-+.+
T Consensus        66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~  105 (569)
T 4azs_A           66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR  105 (569)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence            4579999999999999999999999999999999987654

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.24  E-value=0.1  Score=44.35  Aligned_cols=55  Identities=22%  Similarity=0.226  Sum_probs=42.7

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .+++.|.+.++..   ...+||--|||.|+++..+|+. |..+.|.|.|--|+-..+-.
T Consensus        48 ~~~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~  103 (273)
T 3bus_A           48 RLTDEMIALLDVR---SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANAR  103 (273)
T ss_dssp             HHHHHHHHHSCCC---TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCC---CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence            4555666655432   4569999999999999999985 89999999999998655433

>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46

Probab=95.21  E-value=0.034  Score=46.35  Aligned_cols=41  Identities=20%  Similarity=-0.004  Sum_probs=35.1

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||=.|||.|.++.+++.+|+ .+.|.|.|--|+-..+-.
T Consensus        54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~   95 (201)
T 2ift_A           54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKN   95 (201)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred             CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHH
Confidence            35899999999999999998886 789999999998766443

>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}

Probab=95.21  E-value=0.043  Score=43.02  Aligned_cols=43  Identities=14%  Similarity=0.113  Sum_probs=36.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||-.|||.|+++..+++.+..+.|.|.|--|+-..+-.+
T Consensus        35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~   77 (183)
T 2yxd_A           35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNL   77 (183)
T ss_dssp             TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence            4568999999999999999998899999999998876654433

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.19  E-value=0.1  Score=44.87  Aligned_cols=55  Identities=11%  Similarity=0.010  Sum_probs=41.8

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHH-hhCCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEIS-HLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA-~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .++.|.+.++.   .+..+||--|||.|+++..+| +.|..+.|.|.|--|+-..+-.+
T Consensus        52 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~  107 (287)
T 1kpg_A           52 KIDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV  107 (287)
T ss_dssp             HHHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence            44455554432   245689999999999999999 56999999999999987654443

>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*

Probab=95.05  E-value=0.063  Score=49.05  Aligned_cols=39  Identities=21%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|.|+..+|++|. .+.|.|.|- |+-..+
T Consensus        64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~  103 (340)
T 2fyt_A           64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM  103 (340)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH
T ss_pred             CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH
Confidence            345899999999999999999987 789999996 654443

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=94.96  E-value=0.1  Score=44.59  Aligned_cols=56  Identities=11%  Similarity=-0.018  Sum_probs=42.4

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      .+..+.+.++.  ..+..+||--|||.|.++..+|+.+. .+.|.|.|--|+-..+-.+
T Consensus        33 ~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~   89 (267)
T 3kkz_A           33 VTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNA   89 (267)
T ss_dssp             HHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHH
Confidence            44444455441  23567999999999999999999966 8999999999987665443

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=94.91  E-value=0.042  Score=45.02  Aligned_cols=43  Identities=14%  Similarity=-0.056  Sum_probs=37.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC---CeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G---f~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||--|||.|+++..+++.+   ..+.|.|.|--|+-..+-.+
T Consensus        37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~   82 (219)
T 3dh0_A           37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKV   82 (219)
T ss_dssp             TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH
Confidence            45699999999999999999987   89999999999987665444

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=94.90  E-value=0.08  Score=44.42  Aligned_cols=42  Identities=14%  Similarity=-0.094  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ...+||--|||.|.++.++|++|..+.|.|.|--|+-..+-.
T Consensus        55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~   96 (204)
T 3njr_A           55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKN   96 (204)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence            456899999999999999999999999999999998665433

>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46

Probab=94.90  E-value=0.054  Score=45.17  Aligned_cols=41  Identities=22%  Similarity=-0.045  Sum_probs=35.2

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||=.|||.|.++.+++++|+ .+.|.|.|--|+-..+--
T Consensus        55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~   96 (202)
T 2fpo_A           55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKN   96 (202)
T ss_dssp             TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred             CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHH
Confidence            35899999999999999999986 789999999998765433

>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A

Probab=94.87  E-value=0.032  Score=46.10  Aligned_cols=43  Identities=19%  Similarity=0.129  Sum_probs=36.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|+++..++++|  ..+.|.|.|--|+-..+-.+
T Consensus        29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~   73 (217)
T 3jwh_A           29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL   73 (217)
T ss_dssp             TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH
Confidence            34699999999999999999986  58899999999987665443

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=94.84  E-value=0.058  Score=47.68  Aligned_cols=42  Identities=14%  Similarity=-0.001  Sum_probs=35.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh----CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~----Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||==|||+|+++..||++    |+.+.|.|.|--|+-..+=-
T Consensus        70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~  115 (261)
T 4gek_A           70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRH  115 (261)
T ss_dssp             TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHH
Confidence            4568999999999999999985    78999999999998655433

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=94.80  E-value=0.14  Score=44.69  Aligned_cols=55  Identities=13%  Similarity=-0.058  Sum_probs=41.9

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .++.+.+.++.   ++..+||--|||.|+++..+|++ |..+.|.|.|--|+-..+-.+
T Consensus        60 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~  115 (302)
T 3hem_A           60 KRKLALDKLNL---EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMF  115 (302)
T ss_dssp             HHHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            34444444432   24568999999999999999998 999999999999986554433

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.76  E-value=0.13  Score=43.12  Aligned_cols=55  Identities=9%  Similarity=-0.048  Sum_probs=41.1

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ++..+.+.++..  .+..+||--|||.|+++..+|+.+. .+.|.|.|-.|+-..+-.
T Consensus        33 ~~~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~   88 (257)
T 3f4k_A           33 ATRKAVSFINEL--TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNEN   88 (257)
T ss_dssp             HHHHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            344444444322  2456999999999999999999965 899999999998765433

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=94.73  E-value=0.083  Score=43.28  Aligned_cols=41  Identities=17%  Similarity=-0.083  Sum_probs=35.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||--|||.|.++..+|++|  ..+.|.|.|--|+-..+-
T Consensus        40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~   82 (204)
T 3e05_A           40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRD   82 (204)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence            45689999999999999999997  889999999999865543

>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A

Probab=94.70  E-value=0.054  Score=44.64  Aligned_cols=42  Identities=17%  Similarity=0.091  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||--|||.|+++..++++|  ..+.|.|.|--|+-..+-.
T Consensus        29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~   72 (219)
T 3jwg_A           29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDR   72 (219)
T ss_dssp             TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence            34689999999999999999987  7899999999998766443

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.67  E-value=0.032  Score=46.87  Aligned_cols=40  Identities=18%  Similarity=0.138  Sum_probs=36.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||--|||.|.++..+++.|..+.|.|.|-.|+-..+
T Consensus        48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~   87 (226)
T 3m33_A           48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLAR   87 (226)
T ss_dssp             TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHH
T ss_pred             CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            3468999999999999999999999999999999986554

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=94.66  E-value=0.04  Score=48.84  Aligned_cols=47  Identities=15%  Similarity=0.123  Sum_probs=40.9

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      +++.|.++.|.     +.+||==|||.|+++..||..|..|.|.|.|--|+-
T Consensus        29 l~~~l~~~~~~-----~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~   75 (257)
T 4hg2_A           29 LFRWLGEVAPA-----RGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIR   75 (257)
T ss_dssp             HHHHHHHHSSC-----SSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHH
T ss_pred             HHHHHHHhcCC-----CCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhh
Confidence            67778777653     348999999999999999999999999999999873

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=94.62  E-value=0.043  Score=46.60  Aligned_cols=41  Identities=10%  Similarity=0.016  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||--|||.|.++..+++++..+.|.|.|--|+-..+-
T Consensus        37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~   77 (260)
T 1vl5_A           37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA   77 (260)
T ss_dssp             SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence            45689999999999999999999999999999999865543

>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A

Probab=94.56  E-value=0.063  Score=46.68  Aligned_cols=54  Identities=11%  Similarity=0.091  Sum_probs=43.0

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .+++.|-+..+.   ....+||=-|||.|.|+..++.+|..+.|.|.|--|+-..+-
T Consensus        17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~   70 (244)
T 1qam_A           17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTEN   70 (244)
T ss_dssp             HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHH
T ss_pred             HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            356666665542   245689999999999999999999999999999999865543

>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*

Probab=94.50  E-value=0.074  Score=48.66  Aligned_cols=39  Identities=23%  Similarity=0.158  Sum_probs=33.1

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~F  229 (289)
                      ..+||--|||.|.++..+|++|. .+.|.|.|- |+-..+-
T Consensus        67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~  106 (349)
T 3q7e_A           67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVK  106 (349)
T ss_dssp             TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHH
T ss_pred             CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHH
Confidence            45899999999999999999998 889999994 7654443

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=94.42  E-value=0.083  Score=45.90  Aligned_cols=52  Identities=21%  Similarity=0.213  Sum_probs=42.2

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      -+++.|..+++     +..+||--|||.|.|+..++++|..+.|.|.|-.|+-..+-
T Consensus       109 ~~~~~l~~~~~-----~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~  160 (254)
T 2nxc_A          109 LALKALARHLR-----PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             HHHHHHHHHCC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHhcC-----CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH
Confidence            35666766532     34689999999999999999999999999999999866543

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=94.41  E-value=0.068  Score=43.91  Aligned_cols=54  Identities=13%  Similarity=-0.034  Sum_probs=41.4

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC---CeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G---f~vqgNEfSy~MLLaS~F  229 (289)
                      .++..+.+.+..   .+..+||.-|||.|.++..+++.+   ..+.+.|.|--|+-..+-
T Consensus        64 ~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~  120 (215)
T 2yxe_A           64 HMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAER  120 (215)
T ss_dssp             HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Confidence            455555555432   245699999999999999999986   889999999988865543

>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24

Probab=94.38  E-value=0.15  Score=45.46  Aligned_cols=54  Identities=11%  Similarity=0.063  Sum_probs=43.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .+++.|.+.++.   .+..+||=-|||.|.++..++++|..+.|.|.|--|+-..+-
T Consensus        15 ~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~   68 (285)
T 1zq9_A           15 LIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHK   68 (285)
T ss_dssp             HHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHH
Confidence            356666665543   245689999999999999999999999999999999865443

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=94.35  E-value=0.028  Score=47.31  Aligned_cols=54  Identities=15%  Similarity=0.046  Sum_probs=40.7

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .+..+...+..   +...+||..|||.|.++..+|+.   +..+.+.|.|--|+-..+-.
T Consensus        84 ~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~  140 (258)
T 2pwy_A           84 DASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERN  140 (258)
T ss_dssp             HHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence            34444444432   24568999999999999999998   68999999999887655433

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=94.34  E-value=0.057  Score=45.60  Aligned_cols=41  Identities=27%  Similarity=0.173  Sum_probs=36.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||--|||.|+++..++..|..+.|.|.|--|+-..+-
T Consensus        21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~   61 (239)
T 1xxl_A           21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASS   61 (239)
T ss_dssp             TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHH
Confidence            45689999999999999999999999999999999865543

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=94.23  E-value=0.12  Score=47.56  Aligned_cols=54  Identities=17%  Similarity=0.074  Sum_probs=43.6

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+.+.|.+.++.   .+..+||-=|||.|+++..++++|+.+.|.|.|.-|+-..
T Consensus        92 ~~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a  145 (416)
T 4e2x_A           92 FAMLARDFLATELT---GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKA  145 (416)
T ss_dssp             HHHHHHHHHHTTTC---SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHH
Confidence            44566666666543   2456999999999999999999999999999999988544

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=94.23  E-value=0.12  Score=43.48  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=36.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|+++..+++.++ .+.|.|.|--|+-..+-.+
T Consensus        79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~  122 (241)
T 2ex4_A           79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYL  122 (241)
T ss_dssp             CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHh
Confidence            467999999999999999999875 7899999999987655443

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=94.22  E-value=0.052  Score=46.58  Aligned_cols=56  Identities=16%  Similarity=-0.025  Sum_probs=43.7

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      .|...+..+...+..   ....+||..|||.|.++..+|++   +..+.+.|.|--|+-..+
T Consensus        83 ~~~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~  141 (280)
T 1i9g_A           83 IYPKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHAR  141 (280)
T ss_dssp             CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred             ecHHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence            566666666666542   24568999999999999999986   688999999998875544

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=94.19  E-value=0.24  Score=41.32  Aligned_cols=56  Identities=13%  Similarity=-0.120  Sum_probs=42.3

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ...+..+......   ....+||.-|||.|.++..+|+++..+.+.|.|--|+-..+-.
T Consensus        77 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~  132 (248)
T 2yvl_A           77 PKDSFYIALKLNL---NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKN  132 (248)
T ss_dssp             HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHH
T ss_pred             chhHHHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHH
Confidence            3344455554432   2456899999999999999999999999999999888665443

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=94.15  E-value=0.21  Score=42.21  Aligned_cols=57  Identities=12%  Similarity=-0.087  Sum_probs=42.2

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHH
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      |...+..|...+..   .+..+||-.|||.|.++..+|+.   +..+.+.|.|--|+-..+-.
T Consensus        78 ~~~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~  137 (255)
T 3mb5_A           78 HPKDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN  137 (255)
T ss_dssp             CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred             cHhHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH
Confidence            44444455554432   24568999999999999999998   78999999998887655433

>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A

Probab=94.03  E-value=0.16  Score=46.25  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=32.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS  227 (289)
                      +..+||--|||.|.|+..+|++|. .+.|.|.|- |+-..
T Consensus        50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a   88 (348)
T 2y1w_A           50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHA   88 (348)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHH
T ss_pred             CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHH
Confidence            346899999999999999999987 889999995 65433

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=94.01  E-value=0.03  Score=44.21  Aligned_cols=41  Identities=7%  Similarity=-0.093  Sum_probs=35.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||--|||.|+++..+++++..+.|.|.|-.|+-..+-
T Consensus        17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~   57 (170)
T 3i9f_A           17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKE   57 (170)
T ss_dssp             CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHH
Confidence            45689999999999999999998899999999988765543

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=93.94  E-value=0.041  Score=46.00  Aligned_cols=42  Identities=19%  Similarity=0.122  Sum_probs=35.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||--|||.|+++..++++|+. +.|.|.|-.|+-..+-.
T Consensus        93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~  135 (254)
T 1xtp_A           93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRE  135 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHH
Confidence            4679999999999999999999865 88999999998665433

>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*

Probab=93.80  E-value=0.086  Score=46.55  Aligned_cols=52  Identities=13%  Similarity=0.045  Sum_probs=41.3

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICS  227 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS  227 (289)
                      .|++.|-+..+..   ...+||--|||.|.|+.+|+++| ..+.|.|.|--|+-..
T Consensus        18 ~i~~~iv~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~   70 (249)
T 3ftd_A           18 GVLKKIAEELNIE---EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENL   70 (249)
T ss_dssp             HHHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHH
T ss_pred             HHHHHHHHhcCCC---CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence            3556665555432   35689999999999999999996 8899999999998644

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=93.76  E-value=0.21  Score=44.01  Aligned_cols=44  Identities=25%  Similarity=0.202  Sum_probs=36.7

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHH--HHHhhc
Q 023006          190 PPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICS--SFILNH  233 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS--~FILN~  233 (289)
                      ..+||=.|||.|.++..+|+.|.. |.|+|.|-.|+-..  +.-+|.
T Consensus       126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~  172 (278)
T 2frn_A          126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK  172 (278)
T ss_dssp             TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence            468999999999999999999986 99999999987554  344443

>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54

Probab=93.71  E-value=0.26  Score=41.77  Aligned_cols=60  Identities=13%  Similarity=0.071  Sum_probs=43.4

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+++.+...++.. .....+||=.|||.|.++..+|++  +..+.|.|.|--|+-..+-.+
T Consensus        48 ~~~~~~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~  109 (254)
T 2h00_A           48 YIHWVEDLIGHQDSD-KSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV  109 (254)
T ss_dssp             HHHHHHHHHCCCCGG-GCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcccc-CCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH
Confidence            344555554443321 024568999999999999999987  789999999999987665443

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=93.71  E-value=0.083  Score=43.86  Aligned_cols=43  Identities=14%  Similarity=0.102  Sum_probs=37.3

Q ss_pred             CCCeEEecCCC-chhhHHHHHhh-CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsG-LGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||-.||| .|.++..+|++ +..+.|.|.|--|+-..+-.+
T Consensus        55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~   99 (230)
T 3evz_A           55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNI   99 (230)
T ss_dssp             SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
T ss_pred             CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHH
Confidence            45689999999 99999999999 899999999999987664433

>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*

Probab=93.65  E-value=0.098  Score=48.38  Aligned_cols=43  Identities=19%  Similarity=0.166  Sum_probs=37.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC--eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf--~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||=||||.|.++.++|..|.  .+.|.|.|--|+-..+-.+
T Consensus       217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~  261 (373)
T 3tm4_A          217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNA  261 (373)
T ss_dssp             CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH
Confidence            345799999999999999999987  8999999999997665444

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=93.62  E-value=0.4  Score=42.21  Aligned_cols=52  Identities=15%  Similarity=0.034  Sum_probs=40.6

Q ss_pred             HHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHH
Q 023006          176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       176 e~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +.|.+.++..  .+..+||--|||.|+++..+|++ |..+.|.|.|--|+-..+-
T Consensus       106 ~~l~~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~  158 (312)
T 3vc1_A          106 EFLMDHLGQA--GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNR  158 (312)
T ss_dssp             HHHHTTSCCC--CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHhccC--CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            3444444411  24568999999999999999998 9999999999999865543

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=93.52  E-value=0.097  Score=40.19  Aligned_cols=35  Identities=11%  Similarity=-0.094  Sum_probs=30.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMM  224 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~ML  224 (289)
                      ...+||--|||.|.++..+++.   +..+.|.|.|- |+
T Consensus        22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~   59 (180)
T 1ej0_A           22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD   59 (180)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC
T ss_pred             CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc
Confidence            4459999999999999999987   47889999998 64

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=93.44  E-value=0.29  Score=42.29  Aligned_cols=41  Identities=17%  Similarity=0.006  Sum_probs=35.9

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||--|||.|+++..+++. |..+.|.|.|-.|+-..+-
T Consensus        82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~  123 (297)
T 2o57_A           82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEE  123 (297)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHH
Confidence            4568999999999999999998 9999999999999865543

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=93.42  E-value=0.078  Score=44.66  Aligned_cols=54  Identities=15%  Similarity=0.009  Sum_probs=42.2

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~F  229 (289)
                      .++++.|....+.    ...+||-=|||.|+++..+++.|. .+.|.|.|--|+-..+=
T Consensus        47 ~~~~~~l~~~~~~----~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~  101 (236)
T 1zx0_A           47 TPYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD  101 (236)
T ss_dssp             HHHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH
T ss_pred             HHHHHHHHhhcCC----CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH
Confidence            3566666665432    356899999999999999999887 78899999999865543

>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}

Probab=93.36  E-value=0.12  Score=41.76  Aligned_cols=54  Identities=17%  Similarity=-0.008  Sum_probs=40.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhh-HHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL-ALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRL-A~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      .|..+++.+...-      ...+||--|||.|++ ...++..|+.+.|.|.|--|+-..+-
T Consensus        10 ~~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~   64 (209)
T 2p8j_A           10 QLYRFLKYCNESN------LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAEN   64 (209)
T ss_dssp             HHHHHHHHHHHSS------SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHH
T ss_pred             hHHHHHHHHhccC------CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            3455666666532      345899999999998 55567789999999999999866543

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=93.35  E-value=0.13  Score=44.82  Aligned_cols=56  Identities=16%  Similarity=0.167  Sum_probs=44.7

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHH---hhCCeeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEIS---HLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA---~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+++.|..+.+.    +..+||--|||.|+++..+|   ..+..+.|.|.|-.|+-..+-.+
T Consensus        23 ~~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~   81 (299)
T 3g5t_A           23 SDFYKMIDEYHDG----ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIK   81 (299)
T ss_dssp             HHHHHHHHHHCCS----CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcC----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Confidence            4566777776542    46799999999999999999   45789999999999987665544

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=93.28  E-value=0.2  Score=43.01  Aligned_cols=41  Identities=15%  Similarity=-0.016  Sum_probs=35.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||=.|||.|.++..+|+++. .+.|.|.|--|+-..+-
T Consensus        49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~   90 (259)
T 3lpm_A           49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKR   90 (259)
T ss_dssp             SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHH
T ss_pred             CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHH
Confidence            356899999999999999999976 88999999988765533

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=93.12  E-value=0.2  Score=41.71  Aligned_cols=39  Identities=26%  Similarity=0.189  Sum_probs=33.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~MLLaS  227 (289)
                      ...+||--|||.|.++..+|++ |  -.+.|.|.|--|+-..
T Consensus        73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~  114 (227)
T 1g8a_A           73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLREL  114 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHH
Confidence            4568999999999999999977 3  7889999999887433

>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A

Probab=92.99  E-value=0.22  Score=43.25  Aligned_cols=56  Identities=18%  Similarity=0.135  Sum_probs=42.6

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +++.+.+.+...  .+..+||--|||.|.++..+|++   |..+.|.|.|.-|+-..+-.+
T Consensus         9 ~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~   67 (284)
T 3gu3_A            9 YVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF   67 (284)
T ss_dssp             HHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcc--CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence            444455444322  25679999999999999999998   789999999999987655443

>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}

Probab=92.97  E-value=0.055  Score=44.70  Aligned_cols=42  Identities=14%  Similarity=0.065  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHH-HHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMI-CSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLL-aS~FI  230 (289)
                      +..+||=-|||.|+++..+|++  |..+.|.|.|--|+- +....
T Consensus        27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a   71 (218)
T 3mq2_A           27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKA   71 (218)
T ss_dssp             SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999999  799999999999987 34333

>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0

Probab=92.90  E-value=0.12  Score=45.99  Aligned_cols=41  Identities=12%  Similarity=-0.090  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||--|||+|.|+..||++|-.+.+.|.|--|+-..+=
T Consensus        29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~   69 (255)
T 3tqs_A           29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQK   69 (255)
T ss_dssp             TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHH
T ss_pred             CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHH
Confidence            35689999999999999999999999999999999865543

>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*

Probab=92.89  E-value=0.16  Score=46.41  Aligned_cols=55  Identities=13%  Similarity=-0.020  Sum_probs=42.1

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      |++.|-+....   ....+||--|||+|.|+..|+++|-.+.+.|.|--|+-..+-.+
T Consensus        38 i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~   92 (295)
T 3gru_A           38 FVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLK   92 (295)
T ss_dssp             HHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHH
T ss_pred             HHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHh
Confidence            44445444432   24568999999999999999999999999999999886654333

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=92.86  E-value=0.24  Score=40.00  Aligned_cols=42  Identities=12%  Similarity=0.014  Sum_probs=34.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||-.|||.|+++..+|++ |  -.+.|.|.|--|+-..+-.
T Consensus        22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~   66 (197)
T 3eey_A           22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK   66 (197)
T ss_dssp             TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence            3458999999999999999987 2  4889999999888655433

>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*

Probab=92.70  E-value=0.45  Score=42.35  Aligned_cols=42  Identities=12%  Similarity=0.093  Sum_probs=36.9

Q ss_pred             CCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHh
Q 023006          190 PPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+||=.|||.|.++..+|+. +..+.|.|.|--|+-..+-..
T Consensus       124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~  166 (284)
T 1nv8_A          124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNA  166 (284)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence            458999999999999999999 889999999999987765544

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=92.68  E-value=0.17  Score=42.72  Aligned_cols=43  Identities=21%  Similarity=-0.045  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||.-|||.|.++..+|+++ ..+.+.|.|--|+-..+-.+
T Consensus        91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~  134 (235)
T 1jg1_A           91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNL  134 (235)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH
Confidence            44589999999999999999986 89999999998876654443

>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}

Probab=92.64  E-value=0.13  Score=46.12  Aligned_cols=41  Identities=20%  Similarity=0.146  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||=.|||.|.++..||++|..+.|.|.|--|+-..+-
T Consensus        42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~   82 (299)
T 2h1r_A           42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKK   82 (299)
T ss_dssp             TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHH
T ss_pred             CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence            45689999999999999999999999999999999865543

>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}

Probab=92.63  E-value=0.1  Score=47.31  Aligned_cols=55  Identities=16%  Similarity=0.033  Sum_probs=41.7

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC---CeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G---f~vqgNEfSy~MLLaS~FIL  231 (289)
                      +...|..+...   ++..+||=||||.|.++.|+|..+   ..+.|.|.|.-|+-..+-.+
T Consensus       191 la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~  248 (354)
T 3tma_A          191 LAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAA  248 (354)
T ss_dssp             HHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHH
Confidence            44444444332   245689999999999999999986   89999999999987665443

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=92.63  E-value=0.48  Score=39.48  Aligned_cols=76  Identities=18%  Similarity=0.131  Sum_probs=53.6

Q ss_pred             CchHHHHHHHhhhhhcCC--cCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeee
Q 023006          143 ADVDKVRCIIRNIVRDWA--AEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGN  217 (289)
Q Consensus       143 ~D~dKV~stLkq~vRDWS--~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgN  217 (289)
                      .|-+.|..++.++.+.+.  ..-..+.    ..++..|....      +..+||-=|||.|.++..+|+.   |..+.+.
T Consensus        20 ~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~v   89 (221)
T 3u81_A           20 GDPQSVLEAIDTYCTQKEWAMNVGDAK----GQIMDAVIREY------SPSLVLELGAYCGYSAVRMARLLQPGARLLTM   89 (221)
T ss_dssp             TCHHHHHHHHHHHHHHHTCGGGCCHHH----HHHHHHHHHHH------CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEE
T ss_pred             CCHHHHHHHHHHHhhhcCcCcccCHHH----HHHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE
Confidence            455778888888887443  2222222    23455554432      3458999999999999999984   7899999


Q ss_pred             chhHHHHHHHH
Q 023006          218 EFSYYMMICSS  228 (289)
Q Consensus       218 EfSy~MLLaS~  228 (289)
                      |.|-.|+-..+
T Consensus        90 D~~~~~~~~a~  100 (221)
T 3u81_A           90 EINPDCAAITQ  100 (221)
T ss_dssp             ESCHHHHHHHH
T ss_pred             eCChHHHHHHH
Confidence            99999986553

>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*

Probab=92.61  E-value=0.11  Score=47.31  Aligned_cols=51  Identities=12%  Similarity=0.101  Sum_probs=40.6

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMI  225 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLL  225 (289)
                      ..|.+.+.+.+..   ....+||=||||.|.++..++++   +-.+.|.|.+-.|+-
T Consensus        25 ~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~   78 (421)
T 2ih2_A           25 PEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD   78 (421)
T ss_dssp             HHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC
T ss_pred             HHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH
Confidence            5677777777653   23459999999999999999974   578899999988763

>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20

Probab=92.56  E-value=0.72  Score=37.36  Aligned_cols=42  Identities=10%  Similarity=-0.115  Sum_probs=35.9

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+||=-|||.|.++..+|..  +..+.|.|.|--|+-..+-.+
T Consensus        66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~  109 (207)
T 1jsx_A           66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQ  109 (207)
T ss_dssp             SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence            458999999999999999987  789999999999986665443

>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}

Probab=92.54  E-value=0.28  Score=39.93  Aligned_cols=47  Identities=26%  Similarity=0.272  Sum_probs=36.8

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      ..+.|..+.+     +..+||--|||.|+++..+   |+ .+.|.|.|--|+-..+
T Consensus        26 ~~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~   73 (211)
T 2gs9_A           26 EERALKGLLP-----PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGR   73 (211)
T ss_dssp             HHHHHHTTCC-----CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHH
T ss_pred             HHHHHHHhcC-----CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHH
Confidence            3445555543     3568999999999999888   88 9999999999876544

>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*

Probab=92.36  E-value=0.14  Score=46.22  Aligned_cols=51  Identities=16%  Similarity=0.077  Sum_probs=40.3

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      |++.|-+....   .+. +||--|||+|.|+..|+++|..+.+.|.|--|+-..+
T Consensus        35 i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~   85 (271)
T 3fut_A           35 HLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLE   85 (271)
T ss_dssp             HHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             HHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            55555544332   234 8999999999999999999999999999999986544

>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*

Probab=92.34  E-value=0.22  Score=46.74  Aligned_cols=59  Identities=24%  Similarity=0.209  Sum_probs=44.4

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+++.|.+..+. ......+||=.|||.|+++..++++|..+.+.|.|.-|+-..+-.+
T Consensus       217 ~~ll~~l~~~l~~-~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~  275 (381)
T 3dmg_A          217 LLLLEALQERLGP-EGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGL  275 (381)
T ss_dssp             HHHHHHHHHHHCT-TTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcc-cCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence            3466666554321 1124568999999999999999999999999999999986664433

>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*

Probab=92.26  E-value=0.33  Score=42.09  Aligned_cols=55  Identities=20%  Similarity=0.126  Sum_probs=42.5

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .+++.+.+.++    ....+||=.|||.|.++..+|+.  +..+.|.|.|--|+-..+-..
T Consensus        97 ~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~  153 (276)
T 2b3t_A           97 CLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNA  153 (276)
T ss_dssp             HHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence            35555555554    24568999999999999999976  789999999999987665443

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=92.26  E-value=0.75  Score=37.97  Aligned_cols=74  Identities=15%  Similarity=0.002  Sum_probs=48.5

Q ss_pred             HHHHHHhhhhhc--CCc-CChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechh
Q 023006          147 KVRCIIRNIVRD--WAA-EGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFS  220 (289)
Q Consensus       147 KV~stLkq~vRD--WS~-EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfS  220 (289)
                      .+...+....+.  |.. .-..+.    ..++..|....      ...+||--|||.|.++..+|+.   +-.+.+.|.|
T Consensus        34 ~~l~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~  103 (229)
T 2avd_A           34 PALRSLRLLTLEQPQGDSMMTCEQ----AQLLANLARLI------QAKKALDLGTFTGYSALALALALPADGRVVTCEVD  103 (229)
T ss_dssp             HHHHHHHHHHHTSTTGGGSCCHHH----HHHHHHHHHHT------TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC
T ss_pred             HHHHHHHHHHHhcCCCCCccCHHH----HHHHHHHHHhc------CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC
Confidence            344556666666  321 111222    23455554442      3458999999999999999986   6789999999


Q ss_pred             HHHHHHHHHH
Q 023006          221 YYMMICSSFI  230 (289)
Q Consensus       221 y~MLLaS~FI  230 (289)
                      -.|+-..+-.
T Consensus       104 ~~~~~~a~~~  113 (229)
T 2avd_A          104 AQPPELGRPL  113 (229)
T ss_dssp             SHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9887655433

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=92.19  E-value=0.11  Score=45.33  Aligned_cols=43  Identities=16%  Similarity=-0.121  Sum_probs=36.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||-.|||.|.++..+|+.   +..+.|.|.|-.|+-..+-.+
T Consensus       110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~  155 (275)
T 1yb2_A          110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL  155 (275)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH
T ss_pred             CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999988   789999999998886554433

>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A

Probab=92.17  E-value=0.41  Score=42.71  Aligned_cols=54  Identities=20%  Similarity=0.153  Sum_probs=41.8

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +++.|-+.+.    .+...||=|+||.|.++.+++++|..+.|.|.+-.|+-...--+
T Consensus       224 l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~  277 (297)
T 2zig_A          224 LAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERF  277 (297)
T ss_dssp             HHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence            4555544432    23458999999999999999999999999999998887654333

>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24

Probab=92.10  E-value=0.053  Score=46.66  Aligned_cols=36  Identities=14%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMM  224 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~ML  224 (289)
                      ...+||=.|||.|.++..+|+.|..+.|.|.|--|+
T Consensus        29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~   64 (245)
T 1yub_A           29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLF   64 (245)
T ss_dssp             SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSS
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHH
Confidence            456899999999999999999999999999998876

>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...

Probab=91.94  E-value=0.11  Score=44.98  Aligned_cols=79  Identities=10%  Similarity=-0.079  Sum_probs=50.3

Q ss_pred             HHHHHHhhhhhcCCcCChHHH------------hhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCe
Q 023006          147 KVRCIIRNIVRDWAAEGKTER------------DQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFI  213 (289)
Q Consensus       147 KV~stLkq~vRDWS~EG~~ER------------d~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~  213 (289)
                      ...+.++++.+.|.++.-.++            +.....+++.|.+.++.. .....+||==|||.|+++.-+++. |..
T Consensus        18 ~~~~~~~~~y~~~~~~~y~~~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~l~~~~~~~~   96 (289)
T 2g72_A           18 PGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRCLAQTFATG-EVSGRTLIDIGSGPTVYQLLSACSHFED   96 (289)
T ss_dssp             HHHHHHHHHGGGCCHHHHHHHHHSTTTTCCSSTTSHHHHHHHHHHHHHHTS-CSCCSEEEEETCTTCCGGGTTGGGGCSE
T ss_pred             hHHHHHHHHHhccCHHHHHHHHhcCcccchhhhhHHHHHHHHHHHHHhCCC-CCCCCeEEEECCCcChHHHHhhccCCCe
Confidence            445667777766765211111            013344566666655322 124568999999999976655553 789


Q ss_pred             eeeechhHHHHHH
Q 023006          214 SQGNEFSYYMMIC  226 (289)
Q Consensus       214 vqgNEfSy~MLLa  226 (289)
                      +.|.|+|--|+-.
T Consensus        97 v~gvD~s~~~l~~  109 (289)
T 2g72_A           97 ITMTDFLEVNRQE  109 (289)
T ss_dssp             EEEECSCHHHHHH
T ss_pred             EEEeCCCHHHHHH
Confidence            9999999999853

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=91.93  E-value=0.34  Score=40.11  Aligned_cols=42  Identities=17%  Similarity=-0.005  Sum_probs=35.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-------eeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-------ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-------~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||--|||.|.++..+|+++-       .+.+.|.|-.|+-..+-.
T Consensus        80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~  128 (227)
T 2pbf_A           80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLEN  128 (227)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHH
Confidence            456899999999999999999864       899999999888655433

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=91.87  E-value=0.4  Score=40.31  Aligned_cols=39  Identities=18%  Similarity=0.139  Sum_probs=33.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C-CeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G-f~vqgNEfSy~MLLaS  227 (289)
                      +..+||-=|||.|.++..+|+. | -.+.|.|.|--|+-..
T Consensus        74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a  114 (230)
T 1fbn_A           74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMREL  114 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHH
Confidence            4568999999999999999988 5 6789999999998543

>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}

Probab=91.67  E-value=0.18  Score=45.52  Aligned_cols=39  Identities=15%  Similarity=0.029  Sum_probs=35.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe----eeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI----SQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~----vqgNEfSy~MLLaS  227 (289)
                      ...+||=-|||+|.|+..|+++|..    +.|.|.|--|+-..
T Consensus        42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a   84 (279)
T 3uzu_A           42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRL   84 (279)
T ss_dssp             TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHH
T ss_pred             CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHH
Confidence            3568999999999999999999888    99999999998654

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=91.57  E-value=0.43  Score=39.38  Aligned_cols=43  Identities=14%  Similarity=-0.148  Sum_probs=36.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|.++..+|+.   |..+.+.|.|-.|+-..+-.+
T Consensus        58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~  103 (223)
T 3duw_A           58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNI  103 (223)
T ss_dssp             TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence            3468999999999999999998   889999999999886554333

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=91.51  E-value=0.26  Score=44.02  Aligned_cols=55  Identities=15%  Similarity=0.001  Sum_probs=41.5

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe---eeeechhHHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI---SQGNEFSYYMMICSSFI  230 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~---vqgNEfSy~MLLaS~FI  230 (289)
                      .+++.+.+.+..   ++..+||--|||.|.++..+|++|-.   +.|.|.|--|+-..+-.
T Consensus        62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~  119 (317)
T 1dl5_A           62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRN  119 (317)
T ss_dssp             HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence            345555554432   24569999999999999999999766   99999999998655433

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=91.50  E-value=0.22  Score=43.95  Aligned_cols=42  Identities=17%  Similarity=0.128  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ...+||--|||.|+++..||++  +..+.|.|.|-.|+-..+-.
T Consensus        46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3568999999999999999998  78999999999998766544

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=91.47  E-value=0.46  Score=39.69  Aligned_cols=41  Identities=15%  Similarity=0.026  Sum_probs=35.0

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+||.-|||.|.++..+|+.  |..+.+.|.|--|+-..+-.
T Consensus        55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~   97 (233)
T 2gpy_A           55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH   97 (233)
T ss_dssp             CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred             CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence            458999999999999999998  78999999998887655433

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=91.44  E-value=0.32  Score=41.39  Aligned_cols=43  Identities=12%  Similarity=0.026  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|.++..++++  |..+.|.|.|--|+-..+-.+
T Consensus        37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~   81 (276)
T 3mgg_A           37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENT   81 (276)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence            5679999999999999999998  789999999999986554433

>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}

Probab=91.41  E-value=0.29  Score=43.10  Aligned_cols=52  Identities=12%  Similarity=0.025  Sum_probs=38.8

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeech-hHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEF-SYYMMICSS  228 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEf-Sy~MLLaS~  228 (289)
                      +++.|......   ....+||=-|||.|.++..+|+.|. .|.|.|. |--|+-..+
T Consensus        67 l~~~l~~~~~~---~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~  120 (281)
T 3bzb_A           67 LADTLCWQPEL---IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLE  120 (281)
T ss_dssp             HHHHHHHCGGG---TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHH
T ss_pred             HHHHHHhcchh---cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHH
Confidence            44555543221   1345899999999999999999998 7999999 777765543

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=91.35  E-value=0.33  Score=41.06  Aligned_cols=36  Identities=19%  Similarity=0.125  Sum_probs=31.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMM  224 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~ML  224 (289)
                      +..+||==|||.|+++..+|+++  ..+.|.|.|--|+
T Consensus        57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l   94 (210)
T 1nt2_A           57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF   94 (210)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH
T ss_pred             CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH
Confidence            45689999999999999999873  6899999999885

>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51

Probab=91.34  E-value=0.44  Score=43.73  Aligned_cols=44  Identities=16%  Similarity=-0.029  Sum_probs=37.3

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH--HHHhhc
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS--SFILNH  233 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS--~FILN~  233 (289)
                      ..+||=.|||.|.++..+|+.|..|.++|.|--|+-..  |+-+|.
T Consensus       154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~g  199 (332)
T 2igt_A          154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAG  199 (332)
T ss_dssp             CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHT
T ss_pred             CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999999999988655  444443

>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41

Probab=91.19  E-value=0.3  Score=40.44  Aligned_cols=49  Identities=27%  Similarity=0.304  Sum_probs=39.8

Q ss_pred             hhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       169 ~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      ..|...++.|..+.|      ..+||--|||.|+++..+++.    .|.|.|--|+-..
T Consensus        33 ~~~~~~~~~l~~~~~------~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a   81 (219)
T 1vlm_A           33 FAYLSELQAVKCLLP------EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIA   81 (219)
T ss_dssp             HHHHHHHHHHHHHCC------SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHH
T ss_pred             hhHHHHHHHHHHhCC------CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHH
Confidence            346667778888766      347999999999999999887    8999999887544

>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15

Probab=91.16  E-value=0.12  Score=44.74  Aligned_cols=59  Identities=15%  Similarity=-0.047  Sum_probs=46.5

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSF  229 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~F  229 (289)
                      ...++++.|.+++... ..+..+||==|||.|.++..+++.|+. +.|.|+|--|+-..+=
T Consensus        37 ~~~~~~~~~~~~~~~~-~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~   96 (263)
T 2a14_A           37 MLKFNLECLHKTFGPG-GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEK   96 (263)
T ss_dssp             HHHHHHHHHHHHHSTT-SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCC-CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHH
Confidence            4457788888877432 234568999999999999888899985 8999999999986543

>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}

Probab=91.15  E-value=0.24  Score=42.89  Aligned_cols=39  Identities=23%  Similarity=0.207  Sum_probs=34.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+||==|||.|+++..+|++  +..+.|.|.|--|+-..
T Consensus        46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A   86 (235)
T 3ckk_A           46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYV   86 (235)
T ss_dssp             CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHH
T ss_pred             CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence            4568999999999999999988  57899999999998544

>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*

Probab=91.13  E-value=0.37  Score=42.32  Aligned_cols=53  Identities=13%  Similarity=-0.044  Sum_probs=39.5

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+++.|....+     ...+||--|||.|+++..+++. +..+.|.|.|--|+-..+
T Consensus        21 ~~~~~~~l~~~~~-----~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~   74 (313)
T 3bgv_A           21 IGEFLEKVRQKKK-----RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQ   74 (313)
T ss_dssp             HHHHHHHHHHTC-------CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhhhccC-----CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHH
Confidence            3445555554322     4568999999999999999976 568899999999986543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=91.09  E-value=0.84  Score=39.44  Aligned_cols=42  Identities=10%  Similarity=-0.051  Sum_probs=35.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||.-|||.|.++..+|++   +..+.+.|.|--|+-..+-.
T Consensus       112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~  156 (277)
T 1o54_A          112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN  156 (277)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH
T ss_pred             CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence            4568999999999999999988   57899999999887655443

>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45

Probab=91.02  E-value=0.6  Score=42.14  Aligned_cols=41  Identities=12%  Similarity=0.135  Sum_probs=34.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC-------CeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG-------FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G-------f~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||=||||.|.++..+++..       ..+.|+|.+-.|+-...-
T Consensus       130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~  177 (344)
T 2f8l_A          130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALV  177 (344)
T ss_dssp             SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHH
Confidence            45799999999999999998764       678899999988765543

>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}

Probab=90.96  E-value=0.19  Score=44.69  Aligned_cols=34  Identities=26%  Similarity=0.329  Sum_probs=31.1

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYM  223 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~M  223 (289)
                      ..+||=-|||+|+++..+|++|..|.|+|.|-.|
T Consensus        84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~  117 (258)
T 2r6z_A           84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAV  117 (258)
T ss_dssp             CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHH
T ss_pred             cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhh
Confidence            4589999999999999999999999999999933

>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}

Probab=90.86  E-value=0.76  Score=41.33  Aligned_cols=43  Identities=7%  Similarity=-0.181  Sum_probs=35.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||-=|||.|++...+++.| ..+.|.|.|--|+-..+=-.
T Consensus        48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~   91 (302)
T 2vdw_A           48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY   91 (302)
T ss_dssp             SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH
Confidence            35689999999999777777664 78999999999997765443

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=90.83  E-value=0.33  Score=44.63  Aligned_cols=41  Identities=20%  Similarity=0.074  Sum_probs=35.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||=-|||.|+++..|+++   +..+.|.|.|--|+-..+-
T Consensus        83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~  126 (383)
T 4fsd_A           83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARK  126 (383)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHH
T ss_pred             CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence            5679999999999999999986   6799999999999876543

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=90.73  E-value=0.35  Score=46.82  Aligned_cols=53  Identities=15%  Similarity=0.137  Sum_probs=40.7

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CC-eeeeechhHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICS  227 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf-~vqgNEfSy~MLLaS  227 (289)
                      ..++..+-+.+..   ....+||=.|||.|+++..+|++ |. .|.|.|.|-.|+-..
T Consensus       228 p~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A  282 (433)
T 1u2z_A          228 PNFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT  282 (433)
T ss_dssp             HHHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            4556666555532   24568999999999999999996 65 589999999887654

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=90.73  E-value=0.33  Score=40.77  Aligned_cols=41  Identities=15%  Similarity=0.215  Sum_probs=35.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||=-|||.|+++..+|++  +..+.|.|.|--|+-...-
T Consensus        38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~   80 (213)
T 2fca_A           38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ   80 (213)
T ss_dssp             CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH
T ss_pred             CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH
Confidence            3568999999999999999998  7899999999999865543

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=90.68  E-value=0.35  Score=40.05  Aligned_cols=41  Identities=12%  Similarity=0.148  Sum_probs=35.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||--|||.|.++..+|+.  +..+.|.|.|--|+-...-
T Consensus        41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~   83 (214)
T 1yzh_A           41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALD   83 (214)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHH
T ss_pred             CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHH
Confidence            3568999999999999999998  6889999999999866543

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=90.67  E-value=0.59  Score=38.48  Aligned_cols=53  Identities=11%  Similarity=-0.043  Sum_probs=41.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .++..|....      +..+||--|||.|.++..+|+.   +..+.+.|.|--|+-..+-.+
T Consensus        54 ~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~  109 (225)
T 3tr6_A           54 QLLALLVKLM------QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYW  109 (225)
T ss_dssp             HHHHHHHHHH------TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHHhh------CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Confidence            3555555442      2358999999999999999987   789999999999886654444

>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}

Probab=90.34  E-value=0.22  Score=43.24  Aligned_cols=38  Identities=13%  Similarity=0.167  Sum_probs=34.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMIC  226 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLa  226 (289)
                      ...+||==|||.|+++..++++|. .+.|.|.|.-|+-.
T Consensus        37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~   75 (232)
T 3opn_A           37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAW   75 (232)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCH
T ss_pred             CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHH
Confidence            356899999999999999999995 89999999999764

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=90.28  E-value=0.48  Score=41.17  Aligned_cols=42  Identities=17%  Similarity=-0.046  Sum_probs=35.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ...+||=.|||.|.++..+|++  +..+.|.|.|--|+-..+-.
T Consensus        36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n   79 (260)
T 2ozv_A           36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRS   79 (260)
T ss_dssp             SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH
Confidence            4568999999999999999998  47889999999988665443

>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*

Probab=90.27  E-value=0.26  Score=44.42  Aligned_cols=40  Identities=8%  Similarity=0.032  Sum_probs=32.7

Q ss_pred             CCCeEEecCCCchhhHHHHH----hh------CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEIS----HL------GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA----~~------Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||..|||+|..+|.||    ..      |+.+.|.|.|--|+-..+
T Consensus       105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar  154 (274)
T 1af7_A          105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKAR  154 (274)
T ss_dssp             SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHH
T ss_pred             CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHH
Confidence            46899999999999766655    33      478999999999997664

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=90.20  E-value=0.67  Score=39.20  Aligned_cols=44  Identities=14%  Similarity=0.062  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHh--hCCeeeeechhHHHHHHHHHHhh
Q 023006          189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~--~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +..+||--|||.|.++..+|+  .+..+.+.|.|--|+-..+-.+.
T Consensus        71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~  116 (232)
T 3ntv_A           71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLA  116 (232)
T ss_dssp             TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence            345899999999999999999  57889999999999876654443

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=89.64  E-value=0.68  Score=39.03  Aligned_cols=42  Identities=10%  Similarity=-0.160  Sum_probs=35.2

Q ss_pred             CCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          190 PPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ..+||.-|||.|.++..+|+.   +..+.+.|.|--|+-..+-.+
T Consensus        61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~  105 (239)
T 2hnk_A           61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW  105 (239)
T ss_dssp             CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence            458999999999999999988   678999999998876554333

>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}

Probab=89.63  E-value=0.95  Score=43.77  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=32.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS  227 (289)
                      +..+||--|||.|.|+..+|+.|. .+.|.|.|- |+-..
T Consensus       158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A  196 (480)
T 3b3j_A          158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHA  196 (480)
T ss_dssp             TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHH
T ss_pred             CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHH
Confidence            346899999999999999999875 789999998 76443

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=89.51  E-value=0.86  Score=38.14  Aligned_cols=36  Identities=25%  Similarity=0.209  Sum_probs=31.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMM  224 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~ML  224 (289)
                      ...+||--|||.|.++..+|++ |  -.+.|.|.|.-|+
T Consensus        77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i  115 (233)
T 2ipx_A           77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG  115 (233)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH
T ss_pred             CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH
Confidence            4568999999999999999987 3  7899999998764

>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}

Probab=89.46  E-value=0.49  Score=42.79  Aligned_cols=54  Identities=15%  Similarity=0.034  Sum_probs=40.3

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~FI  230 (289)
                      ..+.|.+.++..   ...+||-.|||.|+++..++++|  ..+.+.|.|..|+-..+-.
T Consensus       184 ~~~~ll~~l~~~---~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~  239 (343)
T 2pjd_A          184 GSQLLLSTLTPH---TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRAT  239 (343)
T ss_dssp             HHHHHHHHSCTT---CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHH
T ss_pred             HHHHHHHhcCcC---CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence            344444555322   23489999999999999999997  6889999999998665433

>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E

Probab=89.42  E-value=0.31  Score=41.57  Aligned_cols=39  Identities=18%  Similarity=0.136  Sum_probs=33.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS  227 (289)
                      +..+||=-|||.|.++..+|+.+  ..+.|.|.|--|+-..
T Consensus        49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a   89 (246)
T 2vdv_E           49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYV   89 (246)
T ss_dssp             CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHH
Confidence            45689999999999999999986  5789999999997544

>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}

Probab=89.31  E-value=0.63  Score=43.37  Aligned_cols=48  Identities=15%  Similarity=0.038  Sum_probs=38.5

Q ss_pred             HHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          178 LDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       178 L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      |.+.++..   ...+||=.|||.|.++..+|++  |..+.|.|.|..|+-..+
T Consensus       214 ll~~l~~~---~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar  263 (375)
T 4dcm_A          214 FMQHLPEN---LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR  263 (375)
T ss_dssp             HHHTCCCS---CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred             HHHhCccc---CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHH
Confidence            44444432   3368999999999999999999  689999999999986553

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=89.17  E-value=0.67  Score=37.12  Aligned_cols=34  Identities=15%  Similarity=-0.007  Sum_probs=29.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C----------CeeeeechhHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G----------FISQGNEFSYY  222 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G----------f~vqgNEfSy~  222 (289)
                      +..+||.=|||.|.++..+|++ |          ..+.|.|.|-.
T Consensus        22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~   66 (196)
T 2nyu_A           22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI   66 (196)
T ss_dssp             TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence            4568999999999999999988 5          67899999973

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=89.15  E-value=0.84  Score=39.16  Aligned_cols=43  Identities=12%  Similarity=-0.181  Sum_probs=36.2

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|.++..+|+.   +-.+.+.|.|--|+-..+-.+
T Consensus        63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~  108 (248)
T 3tfw_A           63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENL  108 (248)
T ss_dssp             TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence            3468999999999999999998   789999999998886554333

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=89.12  E-value=4.2  Score=34.59  Aligned_cols=54  Identities=11%  Similarity=-0.028  Sum_probs=40.8

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+|..|....+.   ++..+||-=|||.|.++..+|+.   |-.+.+.|.|--|+-..+
T Consensus        42 ~~~l~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~   98 (221)
T 3dr5_A           42 GQLLTTLAATTNG---NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAK   98 (221)
T ss_dssp             HHHHHHHHHHSCC---TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHH
T ss_pred             HHHHHHHHHhhCC---CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            3455555554332   23459999999999999999985   688999999999975543

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=88.65  E-value=0.43  Score=42.81  Aligned_cols=55  Identities=18%  Similarity=0.126  Sum_probs=40.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      .|..++..+.-...    .++.+||.-|||.|.++.++++.  +-.+.+.|.|--|+-..+
T Consensus        80 ~y~e~l~~~~l~~~----~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~  136 (304)
T 3bwc_A           80 VYHEVLGHTSLCSH----PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSK  136 (304)
T ss_dssp             HHHHHHHHHHHTTS----SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHhhhhhhcC----CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            35555655543221    24568999999999999999987  468899999998876543

>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}

Probab=88.59  E-value=1.3  Score=37.45  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=30.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYY  222 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~  222 (289)
                      +..+||--|||.|.++..+|++ |  ..+.|.|.|--
T Consensus        43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~   79 (275)
T 3bkx_A           43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASP   79 (275)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCT
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCcc
Confidence            4568999999999999999998 5  88999999975

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=88.46  E-value=0.38  Score=41.11  Aligned_cols=53  Identities=15%  Similarity=-0.016  Sum_probs=42.5

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      .||.+.+.+..+.    ..-+||-=|||+|.++-.||+. +-.++|.|.|--|+-..+
T Consensus        47 ~~~m~~~a~~~~~----~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~  100 (236)
T 3orh_A           47 TPYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLR  100 (236)
T ss_dssp             HHHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH
T ss_pred             HHHHHHHHHhhcc----CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH
Confidence            3777777776542    4568999999999999999987 467789999999986554

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=87.80  E-value=0.9  Score=43.04  Aligned_cols=61  Identities=20%  Similarity=0.116  Sum_probs=41.9

Q ss_pred             hHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHH
Q 023006          164 KTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       164 ~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      ...|..+|.--|..-...++      ...||-=|||.|-|+.-.|+.|- .|.|.|.|-..-.+..-+
T Consensus        64 D~~Rt~aY~~Ai~~~~~~~~------~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~  125 (376)
T 4hc4_A           64 DRVRTDAYRLGILRNWAALR------GKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVV  125 (376)
T ss_dssp             CHHHHHHHHHHHHTTHHHHT------TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCHHhcC------CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHH
Confidence            36688888755433223332      34799999999999999999995 588999986333444333

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=87.63  E-value=0.47  Score=39.22  Aligned_cols=40  Identities=20%  Similarity=0.130  Sum_probs=34.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|.++..+|++ |  ..+.+.|.|-.|+-..+
T Consensus        77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~  119 (226)
T 1i1n_A           77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSV  119 (226)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence            4568999999999999999987 5  68999999999986554

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=87.63  E-value=1.1  Score=41.65  Aligned_cols=86  Identities=20%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             CchHHHHHHHhhhhhcCCcCChHHHhhh-------------------hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhh
Q 023006          143 ADVDKVRCIIRNIVRDWAAEGKTERDQC-------------------YKPILEELDALFPNRSKESPPACLVPGAGLGRL  203 (289)
Q Consensus       143 ~D~dKV~stLkq~vRDWS~EG~~ERd~~-------------------y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRL  203 (289)
                      .++..+...|++++-....-.+.++...                   |.+|++.-..+.   .-++..+||.=|||.|.+
T Consensus        60 ~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la---~l~~g~rVLDIGcG~G~~  136 (298)
T 3fpf_A           60 AEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALG---RFRRGERAVFIGGGPLPL  136 (298)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHT---TCCTTCEEEEECCCSSCH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHc---CCCCcCEEEEECCCccHH
Confidence            3456777777777777665554444432                   223333222222   224677999999999876


Q ss_pred             H-HHHHh-hCCeeeeechhHHHHHHHHHHh
Q 023006          204 A-LEISH-LGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       204 A-~EIA~-~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      + ..+|+ .|..|.|.|.|--|+-..+-.+
T Consensus       137 ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~  166 (298)
T 3fpf_A          137 TGILLSHVYGMRVNVVEIEPDIAELSRKVI  166 (298)
T ss_dssp             HHHHHHHTTCCEEEEEESSHHHHHHHHHHH
T ss_pred             HHHHHHHccCCEEEEEECCHHHHHHHHHHH
Confidence            5 55676 4999999999999998765443

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=87.62  E-value=0.58  Score=39.88  Aligned_cols=39  Identities=18%  Similarity=0.092  Sum_probs=34.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS  227 (289)
                      ...+||==|||.|.++..+|+.  +..+.|.|.|--|+-..
T Consensus        34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a   74 (218)
T 3dxy_A           34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGAC   74 (218)
T ss_dssp             CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred             CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHH
Confidence            4568999999999999999988  46789999999998554

>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}

Probab=87.56  E-value=0.74  Score=37.63  Aligned_cols=62  Identities=16%  Similarity=0.104  Sum_probs=40.1

Q ss_pred             hHHHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHH
Q 023006          145 VDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY  222 (289)
Q Consensus       145 ~dKV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~  222 (289)
                      +++.........+.|....       ...+++.|...      .+..+||--|||.|+++..++   ..+.|.|.|.-
T Consensus        36 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~   97 (215)
T 2zfu_A           36 FLLYHRGFQSQVKKWPLQP-------VDRIARDLRQR------PASLVVADFGCGDCRLASSIR---NPVHCFDLASL   97 (215)
T ss_dssp             HHHHHHHHHHHHTTSSSCH-------HHHHHHHHHTS------CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS
T ss_pred             HHHHHHHHHhhhcccchhH-------HHHHHHHHhcc------CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC
Confidence            3444445555556665421       12366666543      234589999999999998884   67888888755

>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45

Probab=87.28  E-value=1.2  Score=41.96  Aligned_cols=40  Identities=15%  Similarity=0.140  Sum_probs=32.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---------------CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---------------Gf~vqgNEfSy~MLLaS~  228 (289)
                      ...+||=||||.|.+...+++.               +..+.|.|.+..|+-...
T Consensus       171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~  225 (445)
T 2okc_A          171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLAS  225 (445)
T ss_dssp             TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred             CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHH
Confidence            4568999999999999998863               467889999988876553

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=86.85  E-value=1.2  Score=36.63  Aligned_cols=39  Identities=18%  Similarity=0.124  Sum_probs=34.1

Q ss_pred             CCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||-=|||.|..+..+|+.   |-.+.+.|.|--|+-..+
T Consensus        57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~   98 (210)
T 3c3p_A           57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHAR   98 (210)
T ss_dssp             CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            458999999999999999987   789999999999986544

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=86.80  E-value=1.6  Score=36.87  Aligned_cols=42  Identities=14%  Similarity=-0.057  Sum_probs=35.4

Q ss_pred             CCCeEEecCCCchhhHHHHHh--hCCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~--~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      ...+||==|||.|.++..+|.  .|..+.|.|.|--|+-..+-.
T Consensus        70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~  113 (240)
T 1xdz_A           70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKL  113 (240)
T ss_dssp             GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence            456899999999999999995  478999999999998665443

>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}

Probab=86.70  E-value=1  Score=39.53  Aligned_cols=39  Identities=13%  Similarity=0.189  Sum_probs=33.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|+++..+++.  +..+.+.|.| .|+-..+
T Consensus       165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~  205 (335)
T 2r3s_A          165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAK  205 (335)
T ss_dssp             CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHH
T ss_pred             CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHH
Confidence            4579999999999999999998  7899999999 7775443

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=86.69  E-value=0.89  Score=44.66  Aligned_cols=77  Identities=13%  Similarity=0.163  Sum_probs=50.9

Q ss_pred             HHHHHHHhhhhh-------------cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-C
Q 023006          146 DKVRCIIRNIVR-------------DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G  211 (289)
Q Consensus       146 dKV~stLkq~vR-------------DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-G  211 (289)
                      +-++.+|.|.+.             -||++.--|-.   ..++..|-+.+..   +...+||==|||.|+++..+|+. |
T Consensus       123 ~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGEt~---~~~i~~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g  196 (438)
T 3uwp_A          123 GLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETS---FDLVAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATN  196 (438)
T ss_dssp             HHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGGTH---HHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCCCC---HHHHHHHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCC
Confidence            456666666554             46654333322   2344444444332   24568999999999999999975 8


Q ss_pred             Ce-eeeechhHHHHHHHH
Q 023006          212 FI-SQGNEFSYYMMICSS  228 (289)
Q Consensus       212 f~-vqgNEfSy~MLLaS~  228 (289)
                      .. +.|.|+|-.|+-...
T Consensus       197 ~~kVvGIDiS~~~lelAr  214 (438)
T 3uwp_A          197 CKHHYGVEKADIPAKYAE  214 (438)
T ss_dssp             CSEEEEEECCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHH
Confidence            76 999999988776554

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=86.51  E-value=0.64  Score=41.12  Aligned_cols=39  Identities=23%  Similarity=0.210  Sum_probs=33.7

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      +.+||.=|||.|.++.++++.|. .+.+.|.|--|+-..+
T Consensus        76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar  115 (281)
T 1mjf_A           76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSK  115 (281)
T ss_dssp             CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHH
T ss_pred             CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence            46899999999999999999864 7889999998886543

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=86.33  E-value=0.77  Score=42.36  Aligned_cols=55  Identities=20%  Similarity=0.187  Sum_probs=41.0

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      .|.-+|..+.-..    ...+.+||.-|||.|.++.+|++.  +-.+.+.|.|--|+-..+
T Consensus       105 ~y~e~L~~l~l~~----~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar  161 (334)
T 1xj5_A          105 AYQEMITHLPLCS----IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSK  161 (334)
T ss_dssp             HHHHHHHHHHHTT----SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHhh----CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence            4555666554321    123569999999999999999987  468899999999986553

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=86.32  E-value=0.64  Score=43.92  Aligned_cols=45  Identities=11%  Similarity=-0.053  Sum_probs=38.6

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH--HHHhhcc
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS--SFILNHT  234 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS--~FILN~~  234 (289)
                      ..+||=.|||.|.++..+|+.|..|.++|.|--|+-..  |+-+|..
T Consensus       215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~  261 (393)
T 4dmg_A          215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGL  261 (393)
T ss_dssp             TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred             CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999998554  5556653

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=86.02  E-value=2.8  Score=35.66  Aligned_cols=50  Identities=10%  Similarity=-0.068  Sum_probs=39.7

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      .++..|....      +..+||--|||.|..+..+|+.   |-.+.+.|.|--|+-..+
T Consensus        60 ~~l~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~  112 (237)
T 3c3y_A           60 QLMSFVLKLV------NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL  112 (237)
T ss_dssp             HHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHhh------CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            4666665543      3458999999999999999987   789999999998876553

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=85.93  E-value=0.72  Score=41.61  Aligned_cols=40  Identities=15%  Similarity=0.106  Sum_probs=34.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+.+||.=|||.|.++.++++.  +-.+.+.|.|--|+-..+
T Consensus        77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar  118 (314)
T 1uir_A           77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAK  118 (314)
T ss_dssp             CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHH
T ss_pred             CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence            3468999999999999999987  468899999998876543

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=85.69  E-value=1.7  Score=36.11  Aligned_cols=41  Identities=20%  Similarity=0.060  Sum_probs=34.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CC-------eeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GF-------ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf-------~vqgNEfSy~MLLaS~F  229 (289)
                      +..+||--|||.|.++..+|++ |.       .+.+.|.|--|+-..+-
T Consensus        84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~  132 (227)
T 1r18_A           84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKA  132 (227)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHH
Confidence            4568999999999999999985 64       89999999998865543

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=85.65  E-value=1.5  Score=39.19  Aligned_cols=40  Identities=20%  Similarity=0.107  Sum_probs=34.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~MLLaS~  228 (289)
                      +..+||--|||.|.++..+|++ |  -.+.|.|.|--|+-..+
T Consensus       105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~  147 (336)
T 2b25_A          105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK  147 (336)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence            4568999999999999999997 5  78999999998876553

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=85.22  E-value=0.87  Score=40.39  Aligned_cols=55  Identities=18%  Similarity=0.223  Sum_probs=40.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      .|..++..+.-...    .++.+||+-|||.|.++.++++.  +-.+.+.|.|--|+-..+
T Consensus        63 ~Y~e~l~~~~l~~~----~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~  119 (283)
T 2i7c_A           63 AYHEMMTHVPMTVS----KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK  119 (283)
T ss_dssp             HHHHHHHHHHHTTS----SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred             hHHHHHHHHHHhcC----CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence            45556655543211    13469999999999999999987  368899999998876554

>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*

Probab=85.08  E-value=0.53  Score=40.30  Aligned_cols=38  Identities=13%  Similarity=0.030  Sum_probs=32.0

Q ss_pred             CCCeEEecCCCchhhHHHHHh--hCCeeeeechh-HHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFS-YYMMIC  226 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~--~Gf~vqgNEfS-y~MLLa  226 (289)
                      ...+||==|||.|+++..+|+  .|..+.|.|.| --|+-.
T Consensus        24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~   64 (225)
T 3p2e_A           24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDI   64 (225)
T ss_dssp             CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHH
T ss_pred             CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHH
Confidence            345899999999999999995  47889999999 788443

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=85.04  E-value=0.88  Score=41.12  Aligned_cols=39  Identities=21%  Similarity=0.183  Sum_probs=33.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS  227 (289)
                      .+.+||.=|||.|.++.++++.+  -.+.+.|.|--|+-..
T Consensus        95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a  135 (304)
T 2o07_A           95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVS  135 (304)
T ss_dssp             SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence            34689999999999999999884  6889999999887544

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=85.00  E-value=2  Score=38.95  Aligned_cols=64  Identities=20%  Similarity=0.222  Sum_probs=46.9

Q ss_pred             cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHH--HHHHHHhhcc
Q 023006          158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMM--ICSSFILNHT  234 (289)
Q Consensus       158 DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~ML--LaS~FILN~~  234 (289)
                      =|+..-..||..        |.+.+.     +..+||=.|||.|-++..+|++|- .|.++|.|-.++  +-.|--+|+.
T Consensus       107 ~f~~~~~~er~r--------i~~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v  173 (278)
T 3k6r_A          107 MFSPANVKERVR--------MAKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV  173 (278)
T ss_dssp             CCCGGGHHHHHH--------HHHHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred             EEcCCcHHHHHH--------HHHhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence            377777788852        333332     345899999999999999999984 788999987664  4446667764

>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51

Probab=84.94  E-value=0.91  Score=41.85  Aligned_cols=45  Identities=18%  Similarity=-0.006  Sum_probs=36.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH--HHHhhc
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS--SFILNH  233 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS--~FILN~  233 (289)
                      ...+||=.|||.|.++..+|+.|. .+.|.|.|-.|+-..  ++-+|.
T Consensus       217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~  264 (396)
T 2as0_A          217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNG  264 (396)
T ss_dssp             TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred             CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence            345899999999999999999987 789999998887554  444443

>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}

Probab=84.91  E-value=1.1  Score=42.04  Aligned_cols=55  Identities=18%  Similarity=0.174  Sum_probs=40.7

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC----------------------------------------Ce
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG----------------------------------------FI  213 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G----------------------------------------f~  213 (289)
                      +...|-.+.+-   ....+||=||||.|.++.|+|..|                                        ..
T Consensus       183 lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~  259 (385)
T 3ldu_A          183 LAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK  259 (385)
T ss_dssp             HHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred             HHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence            44455444332   234679999999999999999875                                        45


Q ss_pred             eeeechhHHHHHHHHHHh
Q 023006          214 SQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       214 vqgNEfSy~MLLaS~FIL  231 (289)
                      +.|.|.|.-|+-..+--+
T Consensus       260 V~GvDid~~ai~~Ar~Na  277 (385)
T 3ldu_A          260 IYGYDIDEESIDIARENA  277 (385)
T ss_dssp             EEEEESCHHHHHHHHHHH
T ss_pred             EEEEECCHHHHHHHHHHH
Confidence            899999999997775443

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=84.64  E-value=4.8  Score=34.91  Aligned_cols=84  Identities=12%  Similarity=0.073  Sum_probs=54.5

Q ss_pred             HHHHHhhhhhcCCcCCh----HHHhhhh-HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechh
Q 023006          148 VRCIIRNIVRDWAAEGK----TERDQCY-KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFS  220 (289)
Q Consensus       148 V~stLkq~vRDWS~EG~----~ERd~~y-~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfS  220 (289)
                      -...+.+++.+|.....    .+.+..| ..+++.+.-..+. ......+||==|||.|.++..+|..  +..+.+.|.|
T Consensus        35 ~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~-~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s  113 (249)
T 3g89_A           35 AFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLP-LWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDAT  113 (249)
T ss_dssp             HHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSS-CCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESC
T ss_pred             HHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhccc-ccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECC
Confidence            34567777888876322    1222222 4556655544331 1235679999999999999999987  6889999999


Q ss_pred             HHHHHHHHHHhh
Q 023006          221 YYMMICSSFILN  232 (289)
Q Consensus       221 y~MLLaS~FILN  232 (289)
                      --|+-..+-...
T Consensus       114 ~~~~~~a~~~~~  125 (249)
T 3g89_A          114 RKKVAFVERAIE  125 (249)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999976655443

>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*

Probab=84.63  E-value=2  Score=40.53  Aligned_cols=43  Identities=14%  Similarity=0.006  Sum_probs=37.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||=-|||.|.++..||+.+..+.|.|.|--|+-..+--+
T Consensus       286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~  328 (433)
T 1uwv_A          286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNA  328 (433)
T ss_dssp             TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHH
Confidence            3458999999999999999999999999999999987665433

>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}

Probab=84.42  E-value=1.3  Score=41.69  Aligned_cols=44  Identities=14%  Similarity=0.157  Sum_probs=35.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC----------------------------------------eeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF----------------------------------------ISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf----------------------------------------~vqgNEfSy~MLLaS~  228 (289)
                      ....||=||||.|.++.|.|..+-                                        .+.|.|.|.-|+-..+
T Consensus       201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar  280 (393)
T 3k0b_A          201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK  280 (393)
T ss_dssp             TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred             CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence            345799999999999999998753                                        3899999999998775


Q ss_pred             HHhh
Q 023006          229 FILN  232 (289)
Q Consensus       229 FILN  232 (289)
                      --+.
T Consensus       281 ~Na~  284 (393)
T 3k0b_A          281 QNAV  284 (393)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=84.42  E-value=0.9  Score=41.36  Aligned_cols=39  Identities=23%  Similarity=0.186  Sum_probs=34.1

Q ss_pred             CCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~  228 (289)
                      +.+||.-|||.|.++.++++.  +-.+.+.|.|--|+-..+
T Consensus       117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar  157 (321)
T 2pt6_A          117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSK  157 (321)
T ss_dssp             CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence            468999999999999999987  478899999999986554

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=84.21  E-value=0.93  Score=40.55  Aligned_cols=38  Identities=18%  Similarity=0.139  Sum_probs=33.1

Q ss_pred             CCeEEecCCCchhhHHHHHhh-C-CeeeeechhHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICS  227 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~-G-f~vqgNEfSy~MLLaS  227 (289)
                      +.+||.=|||.|.++.++++. | -.+.+.|.|--|+-..
T Consensus        91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a  130 (296)
T 1inl_A           91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAA  130 (296)
T ss_dssp             CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHH
T ss_pred             CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence            468999999999999999987 4 6889999999887654

>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*

Probab=84.07  E-value=1.2  Score=42.42  Aligned_cols=40  Identities=15%  Similarity=0.217  Sum_probs=35.7

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+||=.|||.|.++..+|+.|..+.|.|.|--|+-..+-
T Consensus       291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~  330 (425)
T 2jjq_A          291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR  330 (425)
T ss_dssp             SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            4589999999999999999999999999999999866543

>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}

Probab=84.05  E-value=4.1  Score=36.15  Aligned_cols=64  Identities=17%  Similarity=0.095  Sum_probs=53.0

Q ss_pred             hHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh--CCeeeeechhHHHHHHHHHHhh
Q 023006          164 KTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       164 ~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~--Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      -.||-++|.++-+.+..+++.     ..+||==|||+|-||.-++.+  +-.+.+.|+|--|+-.-+-.+.
T Consensus        29 TReRLp~ld~fY~~~~~~l~~-----~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~   94 (200)
T 3fzg_A           29 TNERVATLNDFYTYVFGNIKH-----VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIG   94 (200)
T ss_dssp             HHTTGGGHHHHHHHHHHHSCC-----CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHhHhHHHHHHHHHhhcCC-----CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHH
Confidence            357778888888888888753     458999999999999999988  7788899999999876655443

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=83.74  E-value=1.1  Score=39.58  Aligned_cols=40  Identities=23%  Similarity=0.184  Sum_probs=34.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-C-CeeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-G-f~vqgNEfSy~MLLaS~  228 (289)
                      ++.+||+=|||.|.++.++++. | -.+.+.|.+--|+-..+
T Consensus        75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar  116 (275)
T 1iy9_A           75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSK  116 (275)
T ss_dssp             SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHH
Confidence            3568999999999999999988 5 68899999998876553

>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*

Probab=83.49  E-value=0.78  Score=42.66  Aligned_cols=44  Identities=14%  Similarity=0.021  Sum_probs=37.0

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH--HHHhhc
Q 023006          190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS--SFILNH  233 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS--~FILN~  233 (289)
                      ..+||=.|||.|.++..+|+.|. .|.|.|.|--|+-..  |.-+|.
T Consensus       213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~  259 (385)
T 2b78_A          213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANH  259 (385)
T ss_dssp             TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTT
T ss_pred             CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence            45899999999999999999987 789999999887655  455554

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=83.16  E-value=2.1  Score=36.19  Aligned_cols=39  Identities=13%  Similarity=-0.086  Sum_probs=33.5

Q ss_pred             CCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||--|||.|.++..+|+.   |-.+.+.|.|-.|+-..+
T Consensus        73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~  114 (232)
T 3cbg_A           73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAK  114 (232)
T ss_dssp             CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            458999999999999999986   678999999998876543

>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}

Probab=83.13  E-value=1.3  Score=47.28  Aligned_cols=41  Identities=17%  Similarity=0.059  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhC---CeeeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~G---f~vqgNEfSy~MLLaS~F  229 (289)
                      ...+||==|||.|+++..||++|   ..+.|.|.|.-|+-..+-
T Consensus       721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~ARe  764 (950)
T 3htx_A          721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAK  764 (950)
T ss_dssp             CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHH
Confidence            45689999999999999999998   899999999999977644

>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A

Probab=83.08  E-value=1.4  Score=38.94  Aligned_cols=38  Identities=16%  Similarity=0.008  Sum_probs=31.5

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe--eeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~--vqgNEfSy~MLLaS~  228 (289)
                      ...+||--|||+|.|+. +++ |-.  +.+.|.|--|+-..+
T Consensus        21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~   60 (252)
T 1qyr_A           21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQ   60 (252)
T ss_dssp             TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHH
T ss_pred             CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHH
Confidence            34579999999999999 764 667  999999999986543

>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}

Probab=82.88  E-value=1.4  Score=38.49  Aligned_cols=43  Identities=9%  Similarity=-0.023  Sum_probs=34.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||--|||.|+++..+|..   |..+.|.|.|--|+-..+-.+
T Consensus       118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~  163 (305)
T 3ocj_A          118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA  163 (305)
T ss_dssp             TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH
Confidence            4568999999999999999632   678999999999986554433

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=82.86  E-value=3.9  Score=35.26  Aligned_cols=50  Identities=12%  Similarity=-0.069  Sum_probs=39.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~  228 (289)
                      .++..|....      +..+||-=|||.|..+..+|+.   |..+.+.|.|--|+-..+
T Consensus        69 ~ll~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~  121 (247)
T 1sui_A           69 QFLSMLLKLI------NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL  121 (247)
T ss_dssp             HHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH
T ss_pred             HHHHHHHHhh------CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            3555555543      2358999999999999999987   789999999998876543

>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}

Probab=82.44  E-value=1.9  Score=40.53  Aligned_cols=43  Identities=19%  Similarity=0.253  Sum_probs=35.5

Q ss_pred             CCeEEecCCCchhhHHHHHhhCC----------------------------------------eeeeechhHHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGF----------------------------------------ISQGNEFSYYMMICSSF  229 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf----------------------------------------~vqgNEfSy~MLLaS~F  229 (289)
                      ...||=|+||.|.++.|.|..+-                                        .+.|.|.|.-|+-..+-
T Consensus       195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~  274 (384)
T 3ldg_A          195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK  274 (384)
T ss_dssp             TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred             CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence            45799999999999999998653                                        38999999999987765


Q ss_pred             Hhh
Q 023006          230 ILN  232 (289)
Q Consensus       230 ILN  232 (289)
                      -+.
T Consensus       275 Na~  277 (384)
T 3ldg_A          275 NAR  277 (384)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}

Probab=81.84  E-value=1.4  Score=38.73  Aligned_cols=45  Identities=13%  Similarity=0.069  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC--eeeeechhHHHHHHHH--HHhhc
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSS--FILNH  233 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf--~vqgNEfSy~MLLaS~--FILN~  233 (289)
                      +..+||=-|||.|.++..+|+.+-  .+.|+|.|--|+-..+  .-+|.
T Consensus       119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~  167 (272)
T 3a27_A          119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK  167 (272)
T ss_dssp             TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence            346899999999999999999854  8899999988876553  44443

>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A

Probab=81.52  E-value=1.8  Score=38.80  Aligned_cols=34  Identities=26%  Similarity=0.287  Sum_probs=31.7

Q ss_pred             CeEEecCCCchhhHHHHHhhCCeeeeechhHHHH
Q 023006          191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMM  224 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~ML  224 (289)
                      .+||==|||+|+.+.++|.+|..|++.|.|-.|.
T Consensus        90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~  123 (258)
T 2oyr_A           90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVA  123 (258)
T ss_dssp             CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHH
T ss_pred             CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHH
Confidence            6899999999999999999999999999999763

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=80.95  E-value=1.5  Score=38.90  Aligned_cols=39  Identities=8%  Similarity=-0.184  Sum_probs=33.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .+.+||+=|||.|.++.++++.|-.+++.|.+--|+-..
T Consensus        72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~a  110 (262)
T 2cmg_A           72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSF  110 (262)
T ss_dssp             CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGG
T ss_pred             CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            346999999999999999998886678999999887644

>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}

Probab=80.62  E-value=1.5  Score=40.29  Aligned_cols=51  Identities=10%  Similarity=0.061  Sum_probs=39.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMIC  226 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLa  226 (289)
                      .+.+.|+.+ ...  ....+||==|||+|.++..++++|. .|.|.|.|.-||-.
T Consensus        72 Kl~~~l~~~-~~~--~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~  123 (291)
T 3hp7_A           72 KLEKALAVF-NLS--VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVW  123 (291)
T ss_dssp             HHHHHHHHT-TCC--CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCH
T ss_pred             HHHHHHHhc-CCC--ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHH
Confidence            355555553 221  1345899999999999999999986 78999999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	289
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	98.62
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	98.34
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	97.89
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	97.74
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	97.66
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.29
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	97.21
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	96.27
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	95.98
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.74
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.65
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.43
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.28
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.15
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	95.1
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	94.92
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	94.89
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	94.83
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.79
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.57
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.49
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	94.36
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.19
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	93.58
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	93.56
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.27
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	93.27
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.49
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	92.24
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	91.9
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	91.32
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	91.12
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	90.7
d1qama_	235	rRNA adenine dimethylase {Bacillus subtilis, Ermc'	90.51
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.08
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	89.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.97
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.12
d2ih2a1	223	DNA methylase TaqI, N-terminal domain {Thermus aqu	88.0
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	87.95
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	86.93
d1af7a2	193	Chemotaxis receptor methyltransferase CheR, C-term	86.89
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	85.98
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	85.41
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.5
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	83.99
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.39
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	82.8
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	82.75
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	82.62
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	82.33

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=98.62  E-value=9.7e-09  Score=80.67  Aligned_cols=59  Identities=19%  Similarity=0.045  Sum_probs=47.1

Q ss_pred             hHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhhc
Q 023006          171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNH  233 (289)
Q Consensus       171 y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN~  233 (289)
                      -+++.+.+..+-+    .+..+||.+|||.||++..||++||.|+|.|.|--|+-..+--.+.
T Consensus         6 ~~~~~~~~~~l~~----~~~~rvLd~GCG~G~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_           6 NKDLQQYWSSLNV----VPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             THHHHHHHHHHCC----CTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHcCC----CCCCEEEEecCcCCHHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            3445555555422    2566999999999999999999999999999999999888766553

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.9e-07  Score=78.27  Aligned_cols=53  Identities=17%  Similarity=0.114  Sum_probs=43.8

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI  225 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLL  225 (289)
                      ....+++.|.++++..   ...+||+||||.||++..||++||.|+|.|+|--|+-
T Consensus        29 ~~~~l~~~~~~~l~~~---~~~rvLd~GCG~G~~a~~LA~~G~~V~gvD~S~~ai~   81 (229)
T d2bzga1          29 GHQLLKKHLDTFLKGK---SGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQ   81 (229)
T ss_dssp             CCHHHHHHHHHHHTTC---CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCHHHHHHHHHhcCCC---CCCEEEEeCCCCcHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            3456777777765432   4568999999999999999999999999999999974

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.89  E-value=1.4e-05  Score=64.09  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=55.6

Q ss_pred             cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       158 DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +|+..+..+.+..+..|-+.|+++++     ++.+||--|||.|+++..+|+.|+.+.|.|.|--|+-..+-.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~ILDiGcG~G~~~~~la~~~~~v~giD~S~~~i~~ak~~~   79 (226)
T d1ve3a1          11 TYTDINSQEYRSRIETLEPLLMKYMK-----KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYA   79 (226)
T ss_dssp             TTTCTTSHHHHHHHHHHHHHHHHSCC-----SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCCcchhhhhHhhhhcccccccccccchhhhhhhh
Confidence            56677777766666777677777665     3468999999999999999999999999999999997665443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.74  E-value=1.9e-05  Score=64.97  Aligned_cols=62  Identities=18%  Similarity=0.220  Sum_probs=45.5

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHh
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      .|...++.++.++......+..+||=.|||.|+++..||++|+.++|.|.|--|+-..+-.+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~iLDiGcGtG~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~   83 (251)
T d1wzna1          22 RVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKA   83 (251)
T ss_dssp             THHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCccchhhcccceEEEEEeecccccccccccc
Confidence            34444444444443222334568999999999999999999999999999999987665443

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.66  E-value=6.5e-05  Score=64.41  Aligned_cols=69  Identities=14%  Similarity=0.070  Sum_probs=53.6

Q ss_pred             HHHHHHhhhhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHH
Q 023006          147 KVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC  226 (289)
Q Consensus       147 KV~stLkq~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLa  226 (289)
                      +....-..++.||....+.+++    .|++.|...       +..+||--|||.||++..||++|+.|+|.|+|--|+-.
T Consensus        25 ~~~~~~~~~~~~~~~r~~~~~~----~l~~~l~~~-------~~~~vLD~GcG~G~~~~~la~~g~~v~gvD~S~~ml~~   93 (292)
T d1xvaa_          25 EAARVWQLYIGDTRSRTAEYKA----WLLGLLRQH-------GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKY   93 (292)
T ss_dssp             HHHHHHHHHHHTTCCBCHHHHH----HHHHHHHHT-------TCCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             hHHHHHHHHhcchhhhHHHHHH----HHHHHhhhc-------CCCEEEEecCCCcHHHHHHHHcCCeeeeccCchHHHHH
Confidence            3344456788888776666553    466666552       34589999999999999999999999999999999853

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.29  E-value=0.0002  Score=57.80  Aligned_cols=51  Identities=24%  Similarity=0.212  Sum_probs=41.5

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .+...|.++.+     ++.+||==|||.|+++..||++|+.+.|.|.|.-|+-..+
T Consensus        31 ~~~~~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~l~~a~   81 (246)
T d2avna1          31 LIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAR   81 (246)
T ss_dssp             HHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHhcC-----CCCEEEEECCCCchhcccccccceEEEEeecccccccccc
Confidence            34444556554     3458999999999999999999999999999999986554

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.21  E-value=0.00016  Score=59.77  Aligned_cols=50  Identities=16%  Similarity=-0.032  Sum_probs=40.3

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      .|++.+...-+     ++.+||=-|||.||++..+|++|+.+.|.|.|--|+-..
T Consensus        26 ~~~~~~~~~~~-----~~~~vLDiGCG~G~~~~~l~~~g~~v~GvD~S~~ml~~A   75 (246)
T d1y8ca_          26 FIIEKCVENNL-----VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEA   75 (246)
T ss_dssp             HHHHHHHTTTC-----CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHH
T ss_pred             HHHHHHHHhCC-----CCCeEEEEeCcCCHHHHHHHHhCCccEeeccchhhhhhc
Confidence            45555555322     345899999999999999999999999999999998654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.27  E-value=0.0017  Score=52.04  Aligned_cols=38  Identities=21%  Similarity=0.132  Sum_probs=35.1

Q ss_pred             CeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      -+||=-|||.||++..+|++|+.++|.|+|--|+-..+
T Consensus        32 grvLDiGcG~G~~~~~la~~g~~v~gvD~s~~~l~~a~   69 (198)
T d2i6ga1          32 GRTLDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLE   69 (198)
T ss_dssp             CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CcEEEECCCCCHHHHHHHHHhhhhccccCcHHHHHHHH
Confidence            38999999999999999999999999999999987554

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=95.98  E-value=0.0043  Score=50.75  Aligned_cols=53  Identities=13%  Similarity=0.007  Sum_probs=44.0

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      .++.+++.+.+.+.      +.+||==|||.|+++..+|++|..|.|.|.|--|+-..+
T Consensus         7 ~~~~~~~~~~~~~~------~~~VLDiGcG~G~~~~~l~~~g~~v~giD~s~~~i~~a~   59 (225)
T d2p7ia1           7 MHPFMVRAFTPFFR------PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQ   59 (225)
T ss_dssp             HHHHHHHHHGGGCC------SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHhhhhCC------CCcEEEEeCCCcHHHHHHHHcCCeEEEEeCcHHHhhhhh
Confidence            34677788877653      347999999999999999999999999999998886554

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.74  E-value=0.0073  Score=52.11  Aligned_cols=52  Identities=21%  Similarity=0.221  Sum_probs=44.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      -+|+.|.++.     ++..+||=-|||.|+|+..+|++|..|.|.|.|--|+-..+-
T Consensus       109 l~l~~l~~~~-----~~g~~VLDiGcGsG~l~i~aa~~g~~V~gvDis~~av~~A~~  160 (254)
T d2nxca1         109 LALKALARHL-----RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             HHHHHHHHHC-----CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHhhc-----CccCEEEEcccchhHHHHHHHhcCCEEEEEECChHHHHHHHH
Confidence            4677787764     245699999999999999999999999999999999977643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.65  E-value=0.029  Score=45.35  Aligned_cols=44  Identities=14%  Similarity=0.015  Sum_probs=38.1

Q ss_pred             CCCeEEecCCCchhhHHHHHh----hCCeeeeechhHHHHHHHHHHhh
Q 023006          189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~----~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +..+||-=|||.|+++..||+    .|+.+.|.|.|--|+-..+-.+.
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~   86 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIA   86 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHH
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhH
Confidence            345899999999999999997    48999999999999988776554

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.43  E-value=0.022  Score=48.89  Aligned_cols=64  Identities=19%  Similarity=0.234  Sum_probs=46.5

Q ss_pred             HHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHhhcc
Q 023006          165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHT  234 (289)
Q Consensus       165 ~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FILN~~  234 (289)
                      ..|...|.--|......+      +..+||.=|||.|.|+..+|++|. .|.|.|.|-.|..+...+....
T Consensus        17 ~~r~~~y~~ai~~~~~~~------~~~~VLDiGcG~G~lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~   81 (311)
T d2fyta1          17 KIRTESYRDFIYQNPHIF------KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNK   81 (311)
T ss_dssp             HHHHHHHHHHHHHCGGGT------TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccccC------CcCEEEEECCCCCHHHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhC
Confidence            456556644332222222      345799999999999999999996 6889999999988887766543

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.28  E-value=0.017  Score=46.24  Aligned_cols=42  Identities=10%  Similarity=0.042  Sum_probs=37.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||=.|||.|.++..+|+.+-.+.+.|.|--|+-..+-.
T Consensus        52 ~~~~VLDiGcG~G~~~~~la~~~~~v~~iD~s~~~i~~a~~n   93 (194)
T d1dusa_          52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKEN   93 (194)
T ss_dssp             TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH
T ss_pred             CCCeEEEEeecCChhHHHHHhhccccceeeeccccchhHHHH
Confidence            456899999999999999999999999999998888777543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.021  Score=47.00  Aligned_cols=45  Identities=20%  Similarity=-0.003  Sum_probs=37.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHhhc
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNH  233 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FILN~  233 (289)
                      ...+||=+|||.|.|+.+++.+|. .|.|.|.|.-++-..+--+..
T Consensus        46 ~g~~vLDlg~GtG~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~   91 (201)
T d1wy7a1          46 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGE   91 (201)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG
T ss_pred             CCCEEEECcCcchHHHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHH
Confidence            456899999999999999999985 789999999888777654443

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.006  Score=49.65  Aligned_cols=58  Identities=16%  Similarity=-0.023  Sum_probs=45.2

Q ss_pred             hhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHH
Q 023006          169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICS  227 (289)
Q Consensus       169 ~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS  227 (289)
                      .....++..+.+.+.... .+..+||==|||.|+++..+|+.|+ .+.|.|+|--|+-..
T Consensus        32 ~~~~~~~~~~~~~~~~~~-~~g~~vLDlGcG~G~~~~~~~~~~~~~v~giD~S~~~i~~a   90 (257)
T d2a14a1          32 EMLKFNLECLHKTFGPGG-LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREEL   90 (257)
T ss_dssp             HHHHHHHHHHHHHHSTTS-CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccC-CCCCEEEEECCCCCHhHHHHhccccCcEEEecCCHHHHHHH
Confidence            345667777777665332 3566899999999999999998887 589999999998544

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=94.92  E-value=0.012  Score=47.92  Aligned_cols=40  Identities=25%  Similarity=0.185  Sum_probs=36.0

Q ss_pred             CCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          188 ESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       188 r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      ++.-|||==|||.|.++..+|++|+.+.|.|.|.-|+-..
T Consensus        15 ~~~~rILDiGcGtG~~~~~la~~~~~v~gvD~S~~~l~~A   54 (234)
T d1xxla_          15 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVA   54 (234)
T ss_dssp             CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeCCcCcHHHHHHHHhCCeEEEEeCChhhhhhh
Confidence            3567999999999999999999999999999999998543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=94.89  E-value=0.022  Score=45.59  Aligned_cols=39  Identities=23%  Similarity=0.089  Sum_probs=34.8

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~  228 (289)
                      ..+||=+|||.|.++.|.+.+|..+.++|.|--|+-.-+
T Consensus        42 g~~vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~a~~~~~   80 (171)
T d1ws6a1          42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLK   80 (171)
T ss_dssp             CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHH
T ss_pred             CCeEEEeccccchhhhhhhhccchhhhcccCHHHHhhhh
Confidence            348999999999999999999999999999998886543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=94.83  E-value=0.069  Score=44.58  Aligned_cols=55  Identities=16%  Similarity=-0.026  Sum_probs=43.5

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ..+++.|....+..   +..+||==|||.|+++..||++ |..|.|.|.|--|+-..+-
T Consensus        53 ~~~~~~l~~~~~l~---~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~  108 (282)
T d2o57a1          53 EWLASELAMTGVLQ---RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEE  108 (282)
T ss_dssp             HHHHHHHHHTTCCC---TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCC---CCCEEEEeCCCCcHHHhhhhccCCcEEEEEeccchhhhhhhc
Confidence            45667777654432   4579999999999999999987 8999999999999854433

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.79  E-value=0.045  Score=47.40  Aligned_cols=64  Identities=20%  Similarity=0.263  Sum_probs=44.9

Q ss_pred             HHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHhhcc
Q 023006          165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHT  234 (289)
Q Consensus       165 ~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FILN~~  234 (289)
                      ..|...|..-|..-...+      +..+||-=|||.|.|+..+|++|. .|.+.|.|-.+.++...+....
T Consensus        20 ~~r~~~y~~aI~~~~~~~------~~~~VLDlGcGtG~ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~   84 (328)
T d1g6q1_          20 TVRTLSYRNAIIQNKDLF------KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNG   84 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHH------TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccccC------CcCEEEEeCCCCCHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhC
Confidence            456666655443322322      245799999999999999999996 6889999976666666655543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.57  E-value=0.011  Score=49.50  Aligned_cols=41  Identities=17%  Similarity=0.080  Sum_probs=35.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSF  229 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~F  229 (289)
                      ...+||=.|||.|.|+..++++|.. |.|.|.|--++-+.+-
T Consensus        48 ~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vDid~~a~~~ar~   89 (197)
T d1ne2a_          48 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKR   89 (197)
T ss_dssp             BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCcHHHHHHHHcCCCcccccccCHHHHHHHHH
Confidence            4568999999999999999999976 8899999988765543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.49  E-value=0.026  Score=48.77  Aligned_cols=62  Identities=21%  Similarity=0.184  Sum_probs=44.0

Q ss_pred             HHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHHHhh
Q 023006          165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       165 ~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~FILN  232 (289)
                      ..|...|.--|..-...+      +..+||-=|||.|.|+..+|++| -.|.|.|.|-.|..+.+-+..
T Consensus        15 ~~R~~~y~~ai~~~~~~~------~~~~VLDiGcG~G~ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~   77 (316)
T d1oria_          15 EVRTLTYRNSMFHNRHLF------KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKA   77 (316)
T ss_dssp             HHHHHHHHHHHHTCHHHH------TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccC------CcCEEEEEecCCcHHHHHHHHhCCCEEEEEcCcHHHhhhhhHHHH
Confidence            456666654332211222      23479999999999999999998 578999999888777765544

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.018  Score=46.63  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=36.1

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      ...+||-=|||.||++..+++.++ .+.|.|+|--|+-..+-.+
T Consensus        60 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~  103 (222)
T d2ex4a1          60 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYL  103 (222)
T ss_dssp             CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHT
T ss_pred             CCCEEEEeccCCCHhhHHHHHhcCCEEEEeecCHHHhhcccccc
Confidence            456899999999999999987765 6899999999997665443

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.19  E-value=0.018  Score=47.63  Aligned_cols=40  Identities=18%  Similarity=0.122  Sum_probs=34.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~  228 (289)
                      ++.+||==|||.|+.+..+++.|+. +.|.|.|--|+-..+
T Consensus        24 ~~~~VLDlGCG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~   64 (252)
T d1ri5a_          24 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDAR   64 (252)
T ss_dssp             TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred             CcCEEEEecccCcHHHHHHHHcCCCeEEEecCCHHHHHHHH
Confidence            4568999999999999999999985 899999999985443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=93.58  E-value=0.045  Score=43.49  Aligned_cols=42  Identities=10%  Similarity=0.025  Sum_probs=36.8

Q ss_pred             CCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHH
Q 023006          188 ESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF  229 (289)
Q Consensus       188 r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~F  229 (289)
                      ++..+||==|||.|.++..+|++|..++|.|.|--|+-..+=
T Consensus        14 ~~~~rVLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~i~~A~~   55 (231)
T d1vl5a_          14 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA   55 (231)
T ss_dssp             CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH
T ss_pred             CCcCEEEEecccCcHHHHHHHHhCCEEEEEECCHHHHhhhhh
Confidence            356799999999999999999999999999999999865433

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=93.56  E-value=0.023  Score=47.82  Aligned_cols=40  Identities=20%  Similarity=0.179  Sum_probs=34.6

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSS  228 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLaS~  228 (289)
                      +..+||==|||.||++..|+..+| .|.+.|.|-.|+-..+
T Consensus        93 ~~~~vLD~GcG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~  133 (254)
T d1xtpa_          93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAK  133 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHH
T ss_pred             CCCeEEEecccCChhhHHHHhhcCceEEEEcCCHHHHHhhh
Confidence            556899999999999999998765 5789999999987665

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.028  Score=47.53  Aligned_cols=53  Identities=17%  Similarity=0.210  Sum_probs=42.3

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHH
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSS  228 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~  228 (289)
                      ..+++.|...+|.    +..+||==|||.|+++..+|+++  ..+.|.|.|-.|+-..+
T Consensus        71 ~~~~~~l~~~~~~----~~~~iLDiGcG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~  125 (268)
T d1p91a_          71 DAIVAQLRERLDD----KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA  125 (268)
T ss_dssp             HHHHHHHHHHSCT----TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHhcCC----CCCEEEEeCCCCcHHHHHHHHHCCCCEEEEecchHhhhhhhh
Confidence            3466667777664    45689999999999999999984  56779999999986554

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.27  E-value=0.082  Score=44.38  Aligned_cols=68  Identities=13%  Similarity=0.063  Sum_probs=50.1

Q ss_pred             hhhcCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC--CeeeeechhHHHHHHHHHH
Q 023006          155 IVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       155 ~vRDWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G--f~vqgNEfSy~MLLaS~FI  230 (289)
                      -.|-|.+--.        .+-.+|.+-+....-++..+||==|||.|..+..||..+  -.|.|.|+|--|+--....
T Consensus        48 e~r~w~p~rs--------klaA~i~~gl~~l~ikpG~~VLDlGcGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~  117 (230)
T d1g8sa_          48 EYRIWNPNKS--------KLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA  117 (230)
T ss_dssp             EEEECCTTTC--------HHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH
T ss_pred             eeeeECCCcc--------HHHHHHHhhHHhCCCCCCCEEEEeCEEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHH
Confidence            4899987543        355566554333334567899999999999999999874  4788999999998644443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.49  E-value=0.22  Score=39.33  Aligned_cols=42  Identities=12%  Similarity=0.044  Sum_probs=36.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||==|||.|.++.++|+.+-.|.|.|.|--|+-..+--
T Consensus        33 ~g~~VLDiGcGsG~~s~~lA~~~~~V~avD~~~~~l~~a~~n   74 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN   74 (186)
T ss_dssp             TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEEECCeEcccccccccceEEEEecCCHHHHHHHHHH
Confidence            566899999999999999999998999999999998766443

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.083  Score=43.81  Aligned_cols=63  Identities=19%  Similarity=0.099  Sum_probs=42.2

Q ss_pred             HHHhhhhHHHHHHHHhhCCCC-CCCCCCeEEecCCCchhhHHHHHhh--------CCeeeeechhHHHHHHH
Q 023006          165 TERDQCYKPILEELDALFPNR-SKESPPACLVPGAGLGRLALEISHL--------GFISQGNEFSYYMMICS  227 (289)
Q Consensus       165 ~ERd~~y~PILe~L~~~fP~~-~~r~~~rVLVPGsGLGRLA~EIA~~--------Gf~vqgNEfSy~MLLaS  227 (289)
                      .+++..-..+.+.|.+.+... ..++..+||==|||.|+++..|+..        +..+.|.|.|--|+-..
T Consensus        15 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a   86 (280)
T d1jqea_          15 TEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKY   86 (280)
T ss_dssp             SHHHHHHHHHHHTHHHHTTTTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHH
Confidence            344444445555555544322 2345668999999999998888653        34568999999997544

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=91.90  E-value=0.14  Score=43.18  Aligned_cols=58  Identities=17%  Similarity=0.130  Sum_probs=43.9

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FIL  231 (289)
                      +-.+++|.+.+...  .++.+||==|||.|.++..||..   |..+.|.|+|--|+-..+-..
T Consensus        12 ~d~l~~l~~~~~~~--~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~   72 (281)
T d2gh1a1          12 DDYVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF   72 (281)
T ss_dssp             HHHHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc--CCcCEEEEecCcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccc
Confidence            33566665544322  25689999999999999999985   788999999999987665443

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.16  Score=41.19  Aligned_cols=58  Identities=14%  Similarity=0.153  Sum_probs=44.5

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHH-HHHHH
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMI-CSSFI  230 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLL-aS~FI  230 (289)
                      ....-++.|.+.+...   +..+||==|||.|.++..+|+. |..+.|.|.|--|+- +..-.
T Consensus        17 ~~~~~~~~l~~~~~l~---pg~~VLDiGCG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~   76 (245)
T d1nkva_          17 FTEEKYATLGRVLRMK---PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRA   76 (245)
T ss_dssp             CCHHHHHHHHHHTCCC---TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCC---CCCEEEEEcCCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHH
Confidence            3344566677766543   3568999999999999999986 899999999999984 34433

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.12  E-value=0.24  Score=43.09  Aligned_cols=42  Identities=14%  Similarity=0.172  Sum_probs=35.4

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CC-eeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf-~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||=-|||.|+++..+|+. |. .+.|.|.|-.|+-...-.
T Consensus       151 ~~~~vlD~GcG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~  194 (328)
T d1nw3a_         151 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETM  194 (328)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHH
T ss_pred             CCCEEEEcCCCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            4568999999999999999986 77 489999999998666443

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.70  E-value=0.31  Score=41.47  Aligned_cols=53  Identities=23%  Similarity=0.224  Sum_probs=39.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHH--HHHHhhccCCCCceEEe
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMIC--SSFILNHTETAGEWNIY  243 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLa--S~FILN~~~~~~~~tIy  243 (289)
                      +..+||-+|||.|-++..+|++|- .|.++|.|-.++-.  .|.-+|+-  .+.++++
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l--~~~v~~~  162 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV--EDRMSAY  162 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEE
T ss_pred             CccEEEECcceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCC--CceEEEE
Confidence            356899999999999999999985 78899998776543  35666654  2345553

>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA adenine dimethylase-like
domain: rRNA adenine dimethylase
species: Bacillus subtilis, Ermc' [TaxId: 1423]

Probab=90.51  E-value=0.39  Score=40.39  Aligned_cols=52  Identities=12%  Similarity=0.119  Sum_probs=41.3

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICS  227 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS  227 (289)
                      -|++.|-+...   -.+..+||--|+|+|.|...|++.|..+.+.|.+--|.-..
T Consensus         8 ~i~~~iv~~~~---~~~~d~VlEIGpG~G~LT~~Ll~~~~~v~avE~D~~l~~~l   59 (235)
T d1qama_           8 HNIDKIMTNIR---LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTT   59 (235)
T ss_dssp             HHHHHHHTTCC---CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHH
T ss_pred             HHHHHHHHhcC---CCCCCeEEEECCCchHHHHHHHhCcCceEEEeeccchHHHH
Confidence            35566555442   23567899999999999999999999999999998876543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.14  Score=39.12  Aligned_cols=32  Identities=19%  Similarity=0.275  Sum_probs=27.1

Q ss_pred             CCCCeEEecCCCchhh--HHHHHhhCCeeeeech
Q 023006          188 ESPPACLVPGAGLGRL--ALEISHLGFISQGNEF  219 (289)
Q Consensus       188 r~~~rVLVPGsGLGRL--A~EIA~~Gf~vqgNEf  219 (289)
                      +++.||+|=|+|++.|  |++|+++|+.|.=-|-
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence            4678999999999998  6889999999876553

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=0.2  Score=40.80  Aligned_cols=56  Identities=14%  Similarity=-0.042  Sum_probs=44.1

Q ss_pred             HHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhhC-CeeeeechhHHHHHHHHHHh
Q 023006          172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       172 ~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~G-f~vqgNEfSy~MLLaS~FIL  231 (289)
                      .|+.+.|......    ..-+||-=|||+|.++..||+.+ -.++|.|.|--|+-..+--.
T Consensus        40 ~~~~~~la~~~~~----~g~~VLdIGcG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~   96 (229)
T d1zx0a1          40 TPYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWA   96 (229)
T ss_dssp             HHHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHG
T ss_pred             HHHHHHHHHhhcc----CCCeEEEeeccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHh
Confidence            3777777775432    34589999999999999999875 57899999999987665444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.97  E-value=0.28  Score=38.50  Aligned_cols=48  Identities=23%  Similarity=0.270  Sum_probs=36.0

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhh--HHHHHhhCCeeeeech
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL--ALEISHLGFISQGNEF  219 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRL--A~EIA~~Gf~vqgNEf  219 (289)
                      -|.-.|+..+.-++..  .++.+|+|=|+|.+.|  |++|+++|+.|+=.|-
T Consensus        12 ~~~~~~~~~~~~~~~~--~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~   61 (370)
T d2iida1          12 DYEEFLEIARNGLKAT--SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEA   61 (370)
T ss_dssp             THHHHHHHHHHCSCCC--SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECS
T ss_pred             cHHHHHHHHhcCCCCC--CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence            3566666666655433  3566999999999998  6889999999986664

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.12  E-value=0.56  Score=36.04  Aligned_cols=53  Identities=19%  Similarity=0.156  Sum_probs=39.0

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCC-eeeeechhHHHHHH--HHHHhhccCCCCceEEe
Q 023006          189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMIC--SSFILNHTETAGEWNIY  243 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf-~vqgNEfSy~MLLa--S~FILN~~~~~~~~tIy  243 (289)
                      ...+||=.|||.|-++.|.+.+|. .|.+.|.+.-++-.  .+...+..  .++++|+
T Consensus        14 ~g~~vlDl~~GtG~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~--~~~~~ii   69 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLL   69 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEE
T ss_pred             CCCeEEEcCCccCHHHHHHHHhCcceeeeehhchhhhhhhhhhhhhccc--ccchhhh
Confidence            356899999999999999999997 67899999887644  34444432  2345554

>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: DNA methylase TaqI, N-terminal domain
domain: DNA methylase TaqI, N-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=88.00  E-value=0.44  Score=37.25  Aligned_cols=48  Identities=13%  Similarity=0.115  Sum_probs=35.1

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHH
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYM  223 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~M  223 (289)
                      +|.+.|-+++...   ...+||=||||.|.+...++++   ...+.|.|.+-.+
T Consensus         6 ~i~~~m~~l~~~~---~~~~IlDp~~G~G~fl~~~~~~~~~~~~i~g~ei~~~~   56 (223)
T d2ih2a1           6 EVVDFMVSLAEAP---RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKA   56 (223)
T ss_dssp             HHHHHHHHHCCCC---TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTT
T ss_pred             HHHHHHHHhcCCC---CcCEEEECCCchHHHHHHHHHhccccceEEeeecCHHH
Confidence            5677777776533   4469999999999999888754   3556788876543

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.95  E-value=0.89  Score=38.68  Aligned_cols=41  Identities=15%  Similarity=0.010  Sum_probs=35.9

Q ss_pred             CCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHH
Q 023006          188 ESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSS  228 (289)
Q Consensus       188 r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~  228 (289)
                      ++..+||==|||.|.++..+|+. |..|+|.+.|--|+-..+
T Consensus        51 ~~g~~VLDiGCG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~   92 (280)
T d2fk8a1          51 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCE   92 (280)
T ss_dssp             CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHhCceeEEEecchHHHHHHHH
Confidence            35679999999999999999977 999999999999976543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.93  E-value=1.9  Score=34.21  Aligned_cols=39  Identities=23%  Similarity=0.118  Sum_probs=33.1

Q ss_pred             CCeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHH
Q 023006          190 PPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS  228 (289)
Q Consensus       190 ~~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~  228 (289)
                      ..+||=.+||.|-++.|.+.+|-. |...|.|--++-+..
T Consensus        42 ~~~vLDlfaGsG~~g~ea~srGa~~v~~ve~~~~a~~~~~   81 (182)
T d2fhpa1          42 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIK   81 (182)
T ss_dssp             SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             CCEEEEcccccccccceeeecchhHHHHHHHHHHHHHHHH
Confidence            458999999999999999999975 789999877665543

>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Chemotaxis receptor methyltransferase CheR, C-terminal domain
domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.89  E-value=0.47  Score=38.08  Aligned_cols=40  Identities=8%  Similarity=0.014  Sum_probs=33.2

Q ss_pred             CCCCeEEecCCCchhhHHHHHhh----------CCeeeeechhHHHHHHH
Q 023006          188 ESPPACLVPGAGLGRLALEISHL----------GFISQGNEFSYYMMICS  227 (289)
Q Consensus       188 r~~~rVLVPGsGLGRLA~EIA~~----------Gf~vqgNEfSy~MLLaS  227 (289)
                      ..++||+..|||.|.-+|.||..          .+.+.|-|.|-.++-..
T Consensus        23 ~~~lrIwsaGCstGeE~YSlA~~l~e~~~~~~~~~~I~atDi~~~~l~~A   72 (193)
T d1af7a2          23 HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKA   72 (193)
T ss_dssp             CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHH
T ss_pred             CCCeEEEEeCCCCchhHHHHHHHHHHhhhhcCCceEEEeecCChHHhhHh
Confidence            46789999999999999999853          25678999999887544

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=85.98  E-value=1.3  Score=35.15  Aligned_cols=38  Identities=24%  Similarity=0.043  Sum_probs=32.7

Q ss_pred             CeEEecCCCchhhHHHHHhhCCe-eeeechhHHHHHHHH
Q 023006          191 PACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS  228 (289)
Q Consensus       191 ~rVLVPGsGLGRLA~EIA~~Gf~-vqgNEfSy~MLLaS~  228 (289)
                      .+||=.+||.|-++.|.+.+|.. |..+|.+.-.+-+-+
T Consensus        45 ~~vLDlfaGsG~~giealsrGa~~v~~VE~~~~a~~~~k   83 (183)
T d2fpoa1          45 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLI   83 (183)
T ss_dssp             CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred             hhhhhhhccccceeeeEEecCcceeEEEEEeechhhHHH
Confidence            47999999999999999999984 889999987766543

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.41  E-value=1.9  Score=36.90  Aligned_cols=57  Identities=12%  Similarity=0.031  Sum_probs=43.0

Q ss_pred             HHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHH-HHHhh
Q 023006          173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICS-SFILN  232 (289)
Q Consensus       173 PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS-~FILN  232 (289)
                      ..++.|-+....   ++..+||==|||.|.+|..+|+. |-.|+|...|--++--. +-+..
T Consensus        49 ~k~~~~~~~l~l---~~G~~VLDiGCG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~  107 (285)
T d1kpga_          49 AKIDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN  107 (285)
T ss_dssp             HHHHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCC---CCCCEEEEecCcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHh
Confidence            355666555443   35679999999999999999876 99999999999887643 33433

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.50  E-value=0.8  Score=37.34  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=35.2

Q ss_pred             CCCCeEEecCCCchhhHHHHHhh-C-CeeeeechhHHHHHHHHHH
Q 023006          188 ESPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       188 r~~~rVLVPGsGLGRLA~EIA~~-G-f~vqgNEfSy~MLLaS~FI  230 (289)
                      ++..+||==|||.|.++..||.. | =.|.|.|+|--|+-...-.
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~   99 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLEL   99 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHH
Confidence            46679999999999999999986 2 2789999999998654433

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.99  E-value=1  Score=41.10  Aligned_cols=43  Identities=16%  Similarity=0.149  Sum_probs=36.7

Q ss_pred             CCCeEEecCCCchhhHHHHHhh-CC-eeeeechhHHHHHHHHHHh
Q 023006          189 SPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFIL  231 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~-Gf-~vqgNEfSy~MLLaS~FIL  231 (289)
                      +..+||==|||.|+++..+|+. |. .|.|.|.|-.|+-..+-..
T Consensus       216 pgd~fLDLGCG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~  260 (406)
T d1u2za_         216 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQY  260 (406)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHH
T ss_pred             CCCEEEeCCCCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHH
Confidence            4568999999999999999987 76 6899999999988776544

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.39  E-value=1.7  Score=35.63  Aligned_cols=42  Identities=17%  Similarity=0.017  Sum_probs=35.3

Q ss_pred             CCCeEEecCCCchhhHHHHHhh---CCeeeeechhHHHHHHHHHH
Q 023006          189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~---Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      +..+||.-|||.|.++.-||++   +..|.|.|.+--|+-..+-.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~  120 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNN  120 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHh
Confidence            5679999999999999999987   46899999999888665433

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=82.80  E-value=1.1  Score=38.11  Aligned_cols=69  Identities=12%  Similarity=0.015  Sum_probs=50.2

Q ss_pred             cCCcCChHHHhhhhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-C--CeeeeechhHHHHHHHHH
Q 023006          158 DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSF  229 (289)
Q Consensus       158 DWS~EG~~ERd~~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-G--f~vqgNEfSy~MLLaS~F  229 (289)
                      ||...-+..-+..|+.-...|-.....   ++..+||=.|||.|.|+..||+. |  =.+.+.|+|--|+-..+=
T Consensus        75 d~~~~~~r~~qiiypkd~~~Ii~~l~i---~pG~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~  146 (266)
T d1o54a_          75 DEIMNMKRRTQIVYPKDSSFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES  146 (266)
T ss_dssp             HHHHTCCC-CCCCCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH
T ss_pred             HHHhhccCCccccchHHHHHHHHhhCC---CCCCEEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Confidence            344333333356888888888777643   35779999999999999999986 3  468899999888755433

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=82.75  E-value=1.3  Score=36.81  Aligned_cols=44  Identities=20%  Similarity=0.144  Sum_probs=37.8

Q ss_pred             CCCeEEecCCCchhhHHHHHhhCCeeeeechhHHHHHHHHHHhh
Q 023006          189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILN  232 (289)
Q Consensus       189 ~~~rVLVPGsGLGRLA~EIA~~Gf~vqgNEfSy~MLLaS~FILN  232 (289)
                      +..+||-=|||.|.++.-||+++-.|.+.|.+--+.-..+=.+.
T Consensus        70 ~g~~VLdIG~GsGy~ta~La~l~~~V~aiE~~~~~~~~A~~~~~  113 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS  113 (224)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT
T ss_pred             ccceEEEecCCCCHHHHHHHHHhcccccccccHHHHHHHHHHHh
Confidence            56699999999999999999999999999999888776654443

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.62  E-value=3  Score=35.68  Aligned_cols=54  Identities=13%  Similarity=-0.071  Sum_probs=40.9

Q ss_pred             HHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHH
Q 023006          174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFI  230 (289)
Q Consensus       174 ILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FI  230 (289)
                      .++.|-+....   ++..+||==|||.|.|+..+|+. |..++|+..|--++...+=.
T Consensus        49 k~~~~~~~l~l---~~G~~VLDiGCG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~  103 (291)
T d1kpia_          49 KRKLALDKLNL---EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAM  103 (291)
T ss_dssp             HHHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHhcCC---CCCCEEEEecCcchHHHHHHHHhcCcceeeccchHHHHHHHHHH
Confidence            44555444332   35679999999999999999865 99999999999987655433

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.33  E-value=0.65  Score=38.50  Aligned_cols=63  Identities=14%  Similarity=-0.131  Sum_probs=47.6

Q ss_pred             hhHHHHHHHHhhCCCCCCCCCCeEEecCCCchhhHHHHHhh-CCeeeeechhHHHHHHHHHHhhc
Q 023006          170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNH  233 (289)
Q Consensus       170 ~y~PILe~L~~~fP~~~~r~~~rVLVPGsGLGRLA~EIA~~-Gf~vqgNEfSy~MLLaS~FILN~  233 (289)
                      ....++..|.+.|+... ....+||==|||.|.+....|.. +..+.|.|+|--|+-..+--++.
T Consensus        36 ~~~~~~~~~~~~f~~g~-~~g~~vLDiGcG~g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~~   99 (263)
T d2g72a1          36 VGPWKLRCLAQTFATGE-VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQE   99 (263)
T ss_dssp             HHHHHHHHHHHHHHTSC-SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred             hhhhHHHHHHHHcCCCC-CCCcEEEEeccCCCHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHhc
Confidence            34567788888876443 35679999999999998666655 45699999999999877655554