Citrus Sinensis ID: 023023

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
ccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cccccccccccccHHHHHHHHHHHccccEEccccHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
mqvqnphsikyngtIQGLKYIWksegfrglfkgngtncariipnsavkffsyeEASKGILWLYRRQtrneeaeltpvlrlgaGACAGIIAMsatypmdmvrgrltvqteksprqYRGIFHALTTVlreegprslykgwlpsvigvipyVGLNFAVYESLKDWLIKSKalglvddnnelgVATRLACgaaagtvgqtvaYPLDVIRRRMQMAGWKDAASvvtgdgktkatLEYNGMVDAFRKTVRhegfgalykglvpnsvkvvpSIAIAFVTYEMVKDILGVEMRISD
mqvqnphsikyngtiQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTvqteksprqyrGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLAcgaaagtvgqtVAYPLDVIRRRMQMAGWKDaasvvtgdgktkaTLEYNGMVDAFRKTVRHEGFGAlykglvpnsvkVVPSIAIAFVTYEMVKDILGVEMRISD
MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLacgaaagtvgqtvaYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
********IKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE*****
MQ***********TIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWL*************PVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIK*************GVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWK*********GKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDI**VE*****
MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
********IKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWK****************EYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGV******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query288 2.2.26 [Sep-21-2011]
O04619352 Mitochondrial adenine nuc yes no 0.996 0.815 0.815 1e-142
Q54MZ4434 Mitochondrial substrate c yes no 0.881 0.585 0.404 7e-52
Q9BV35468 Calcium-binding mitochond yes no 0.888 0.547 0.350 2e-45
Q7T0U6473 Calcium-binding mitochond N/A no 0.871 0.530 0.374 3e-45
Q5XHA0473 Calcium-binding mitochond yes no 0.871 0.530 0.374 6e-45
Q7ZY36473 Calcium-binding mitochond N/A no 0.871 0.530 0.367 6e-44
Q66L49477 Calcium-binding mitochond no no 0.868 0.524 0.347 3e-43
Q12251326 Uncharacterized mitochond yes no 0.906 0.800 0.370 3e-43
Q6NYZ6469 Calcium-binding mitochond no no 0.840 0.515 0.360 3e-43
Q6GQS1467 Calcium-binding mitochond yes no 0.885 0.546 0.349 7e-43
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  504 bits (1299), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 235/288 (81%), Positives = 265/288 (92%), Gaps = 1/288 (0%)

Query: 1   MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGIL 60
           +QVQNPH+IKY+GT+QGLK+IW++EG RGLFKGNGTNCARI+PNSAVKFFSYE+AS GIL
Sbjct: 66  LQVQNPHNIKYSGTVQGLKHIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASNGIL 125

Query: 61  WLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFH 120
           ++YR++T NE A+LTP+LRLGAGA AGIIAMSATYPMDMVRGRLTVQT  SP QYRGI H
Sbjct: 126 YMYRQRTGNENAQLTPLLRLGAGATAGIIAMSATYPMDMVRGRLTVQTANSPYQYRGIAH 185

Query: 121 ALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGV 180
           AL TVLREEGPR+LY+GWLPSVIGV+PYVGLNF+VYESLKDWL+K    GLV +NNEL V
Sbjct: 186 ALATVLREEGPRALYRGWLPSVIGVVPYVGLNFSVYESLKDWLVKENPYGLV-ENNELTV 244

Query: 181 ATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFR 240
            TRL CGA AGTVGQT+AYPLDVIRRRMQM GWKDA+++VTG+G++ A+LEY GMVDAFR
Sbjct: 245 VTRLTCGAIAGTVGQTIAYPLDVIRRRMQMVGWKDASAIVTGEGRSTASLEYTGMVDAFR 304

Query: 241 KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 288
           KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKD+LGVE RISD
Sbjct: 305 KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEFRISD 352
Mitochondrial adenylate carrier that catalyzes specifically the transport of ATP, ADP and AMP by a counter-exchange mechanism across the inner mitochondrial membrane. Substrate preference in reconstituted proteoliposomes is ATP > AMP > ADP. May play a role in oxidative phosphorylation and be important for the provision of energy required to support growth in heterotrophic tissues.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description
>sp|Q66L49|SCMC1_DANRE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q12251|YP011_YEAST Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR011C PE=1 SV=1 Back     alignment and function description
>sp|Q6NYZ6|SCM2A_DANRE Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1 Back     alignment and function description
>sp|Q6GQS1|SCMC3_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
255537727355 Grave disease carrier protein, putative 0.996 0.808 0.895 1e-154
225426016354 PREDICTED: mitochondrial substrate carri 0.996 0.810 0.909 1e-153
225454464354 PREDICTED: mitochondrial substrate carri 0.996 0.810 0.881 1e-151
224075076354 predicted protein [Populus trichocarpa] 0.996 0.810 0.881 1e-150
118489131354 unknown [Populus trichocarpa x Populus d 0.996 0.810 0.878 1e-150
224053799354 predicted protein [Populus trichocarpa] 0.996 0.810 0.878 1e-150
224130494354 predicted protein [Populus trichocarpa] 0.996 0.810 0.857 1e-149
449432098354 PREDICTED: mitochondrial substrate carri 0.996 0.810 0.868 1e-148
255583822354 Grave disease carrier protein, putative 0.996 0.810 0.864 1e-148
224067958354 predicted protein [Populus trichocarpa] 0.996 0.810 0.857 1e-148
>gi|255537727|ref|XP_002509930.1| Grave disease carrier protein, putative [Ricinus communis] gi|223549829|gb|EEF51317.1| Grave disease carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 258/288 (89%), Positives = 279/288 (96%), Gaps = 1/288 (0%)

Query: 1   MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGIL 60
           +QVQNPHSIKYNGTIQGLKYIW++EGFRGLFKGNGTNCARI+PNSAVKFFSYEEASKGIL
Sbjct: 69  LQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEEASKGIL 128

Query: 61  WLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFH 120
           W+YR+QT N++A+LTP+LRLGAGACAGIIAMSATYPMDMVRGRLTVQTE SPRQY+GIFH
Sbjct: 129 WMYRQQTGNDDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYKGIFH 188

Query: 121 ALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGV 180
           AL+TVL+EEGPR+LY+GWLPSVIGV+PYVGLNFAVYESLKDWL+KSK  GLV D NELGV
Sbjct: 189 ALSTVLKEEGPRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLKSKPFGLVQD-NELGV 247

Query: 181 ATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFR 240
           ATRLACGAAAGTVGQTVAYPLDVIRRRMQM GWKDAASV+TGDGKTKA LEY GMVDAFR
Sbjct: 248 ATRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVITGDGKTKAPLEYTGMVDAFR 307

Query: 241 KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 288
           KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE+VKD+LGVE+RISD
Sbjct: 308 KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYELVKDVLGVEVRISD 355

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426016|ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297742308|emb|CBI34457.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225454464|ref|XP_002280675.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297745401|emb|CBI40481.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075076|ref|XP_002304548.1| predicted protein [Populus trichocarpa] gi|222841980|gb|EEE79527.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489131|gb|ABK96372.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|224053799|ref|XP_002297985.1| predicted protein [Populus trichocarpa] gi|222845243|gb|EEE82790.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224130494|ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|222861624|gb|EEE99166.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432098|ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] gi|449480266|ref|XP_004155845.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255583822|ref|XP_002532663.1| Grave disease carrier protein, putative [Ricinus communis] gi|223527623|gb|EEF29736.1| Grave disease carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224067958|ref|XP_002302618.1| predicted protein [Populus trichocarpa] gi|222844344|gb|EEE81891.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
UNIPROTKB|Q6I583355 OSJNBa0009C07.13 "Putative per 0.989 0.802 0.770 8.8e-118
TAIR|locus:2157423487 APC2 "ATP/phosphate carrier 2" 0.642 0.379 0.360 3e-39
UNIPROTKB|Q5PQ27327 slc25a42 "Mitochondrial coenzy 0.618 0.544 0.387 4.5e-38
UNIPROTKB|Q05AQ3327 slc25a42 "Mitochondrial coenzy 0.611 0.538 0.396 4.5e-38
UNIPROTKB|E1BW83475 SLC25A24 "Uncharacterized prot 0.670 0.406 0.330 1.3e-37
MGI|MGI:1920345318 Slc25a42 "solute carrier famil 0.631 0.572 0.415 1.9e-37
RGD|1592346318 Slc25a42 "solute carrier famil 0.631 0.572 0.415 1.9e-37
UNIPROTKB|P0C546318 Slc25a42 "Mitochondrial coenzy 0.631 0.572 0.415 1.9e-37
UNIPROTKB|F1NH71300 SLC25A42 "Uncharacterized prot 0.611 0.586 0.386 9.2e-36
SGD|S000006215326 YPR011C "Putative transporter" 0.902 0.797 0.355 1.5e-35
UNIPROTKB|Q6I583 OSJNBa0009C07.13 "Putative peroxisomal Ca-dependent solute carrier" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 222/288 (77%), Positives = 249/288 (86%)

Query:     1 MQVQNPHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGIL 60
             +QVQNPHSIKYNGTIQGLKYIW++EG RGLFKGNGTNCARI+PNSAVKFFSYE+AS GIL
Sbjct:    71 LQVQNPHSIKYNGTIQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASSGIL 130

Query:    61 WLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFH 120
             WLYR+QT NE+A+L+P+LRLGAGACAGIIAMSATYPMDMVRGR+TVQTEKSP QYRG+FH
Sbjct:   131 WLYRQQTGNEDAQLSPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFH 190

Query:   121 ALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGV 180
             AL +V REEG R+LY+GWLPSVIGV+PYVGLNFAVYESLKDWL+++    L  DN EL V
Sbjct:   191 ALGSVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNPYDLGKDN-ELHV 249

Query:   181 ATRLXXXXXXXXXXXXXXYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFR 240
              TRL              YPLDVIRRRMQM GW +AAS+VTG+GK    L+YNGM+DAFR
Sbjct:   250 VTRLGCGAVAGTIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKE--ALQYNGMIDAFR 307

Query:   241 KTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 288
             KTVR+EG GALYKGLVPNSVKVVPSIAIAFVTYE V+ +LGVEMRISD
Sbjct:   308 KTVRYEGVGALYKGLVPNSVKVVPSIAIAFVTYEFVQKVLGVEMRISD 355
GO:0005634 "nucleus" evidence=IC
TAIR|locus:2157423 APC2 "ATP/phosphate carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW83 SLC25A24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1920345 Slc25a42 "solute carrier family 25, member 42" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1592346 Slc25a42 "solute carrier family 25, member 42" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P0C546 Slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH71 SLC25A42 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
SGD|S000006215 YPR011C "Putative transporter" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04619ADNT1_ARATHNo assigned EC number0.81590.99650.8153yesno
Q12251YP011_YEASTNo assigned EC number0.37020.90620.8006yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002457001
SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (354 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-32
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-30
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-28
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-15
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-05
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.001
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score =  114 bits (288), Expect = 2e-32
 Identities = 38/95 (40%), Positives = 54/95 (56%)

Query: 73  ELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPR 132
            L+ +  L AG  AG IA + TYP+D+V+ RL        R+Y+GI      + +EEG R
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 133 SLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSK 167
            LYKG LP+++ V P   + F  YE+LK  L+K  
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 288
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.98
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.95
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.92
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.9
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.89
KOG1519297 consensus Predicted mitochondrial carrier protein 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.79
KOG2745321 consensus Mitochondrial carrier protein [General f 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG2954427 consensus Mitochondrial carrier protein [General f 99.72
KOG1519297 consensus Predicted mitochondrial carrier protein 99.36
KOG2954427 consensus Mitochondrial carrier protein [General f 98.7
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=7.7e-54  Score=354.50  Aligned_cols=262  Identities=49%  Similarity=0.848  Sum_probs=228.7

Q ss_pred             CCCCC--CCCCCCCcHHHHHHHHHHhcCcccccccchhhhhccccccceehhhhHHHHHhHHHHHhhcccccccccchHH
Q 023023            1 MQVQN--PHSIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVL   78 (288)
Q Consensus         1 lQ~q~--~~~~~~~~~~~~~~~i~~~eG~~~l~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (288)
                      +|+|.  ....+|+|+++.+++|+++||++|||||..+++++.+|+.+++|.+||..++....      .++....++..
T Consensus        55 fQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~------~~~~~~~~~~~  128 (320)
T KOG0752|consen   55 FQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLG------VDPNGSLSPLV  128 (320)
T ss_pred             EEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhc------cCcccccchhH
Confidence            57776  35689999999999999999999999999999999999999999999999653221      22222788999


Q ss_pred             HHHHHHHHHHhHhhhcchHHHHHHHHhcccCCCCCccCcHHHHHHHHHhhcCccccccChhhhhhhhchhhhHHHHHHHH
Q 023023           79 RLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYES  158 (288)
Q Consensus        79 ~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++++|++||+++.++++|||++|+|+.++.+..  .|+++.+++++|+++||++|||||+.|++++..|+.++.|.+||.
T Consensus       129 ~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~--~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~  206 (320)
T KOG0752|consen  129 RLVAGALAGMTATLATYPLDLLRTRLAVQGELK--VYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDT  206 (320)
T ss_pred             HHHHHHHHHHHHHHhcCcHHHhhhheeeecccc--cCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHH
Confidence            999999999999999999999999998886643  699999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcccccccccccCCCCcccccccCcHHHH
Q 023023          159 LKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDA  238 (288)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
                      +|++....     ..++++.+.+..+++|++||+++.+++||||+||+|||+.+.+..          .....+.+++||
T Consensus       207 lk~~~~~~-----~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~----------~~~~~~~~~~~~  271 (320)
T KOG0752|consen  207 LKKWQYLK-----SSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYF----------GGGFRYKGVLDA  271 (320)
T ss_pred             HHHhhccc-----ccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCcccc----------ccccccccHHHH
Confidence            99962111     122346788899999999999999999999999999999886411          112356899999


Q ss_pred             HHHHHhhhccccccccchhhhhhhhhhhhHHHHHHHHHHHHhccccC
Q 023023          239 FRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMR  285 (288)
Q Consensus       239 ~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~~~~~~~~~~  285 (288)
                      +++|+++||+.|||||+.|++++.+|+.++.|.+||.+|.++.....
T Consensus       272 ~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~~  318 (320)
T KOG0752|consen  272 FRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLKR  318 (320)
T ss_pred             HHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhcccc
Confidence            99999999999999999999999999999999999999988876543

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 5e-22
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 4e-11
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-18
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 26/273 (9%)
Query: 10  KYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRN 69
           +Y G I  +  I K +GF   ++GN  N  R  P  A+ F ++++  K I        R+
Sbjct: 49  QYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNF-AFKDKYKQIF--LGGVDRH 105
Query: 70  EEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK--SPRQYRGIFHALTTVLR 127
           ++        L +G  AG  ++   YP+D  R RL     K  + R++ G+ + +T + +
Sbjct: 106 KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFK 165
Query: 128 EEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLXXX 187
            +G R LY+G+  SV G+I Y    F VY++ K         G++ D   + +       
Sbjct: 166 SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK---------GMLPDPKNVHIIVSWMIA 216
Query: 188 XXXXXXXXXXXYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEG 247
                      YP D +RRRM M             G+  A + Y G VD +RK  + EG
Sbjct: 217 QTVTAVAGLVSYPFDTVRRRMMMQ-----------SGRKGADIMYTGTVDCWRKIAKDEG 265
Query: 248 FGALYKGLVPNSVKVVPSIAIAFVTYEMVKDIL 280
             A +KG   N ++ +   A   V Y+ +K  +
Sbjct: 266 PKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKFV 297
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-111
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-55
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-22
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-58
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 9e-47
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-35
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-18
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  323 bits (829), Expect = e-111
 Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 31/287 (10%)

Query: 1   MQVQNPHS-----IKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEA 55
           +QVQ+         +Y G I  +  I K +GF   ++GN  N  R  P  A+ F   ++ 
Sbjct: 35  LQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKY 94

Query: 56  SKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK--SPR 113
            +          R+++        L +G  AG  ++   YP+D  R RL     K  + R
Sbjct: 95  KQ---IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQR 151

Query: 114 QYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVD 173
           ++ G+ + +T + + +G R LY+G+  SV G+I Y    F VY++ K  L          
Sbjct: 152 EFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML---------P 202

Query: 174 DNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYN 233
           D   + +            V   V+YP D +RRRM M             G+  A + Y 
Sbjct: 203 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS-----------GRKGADIMYT 251

Query: 234 GMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDIL 280
           G VD +RK  + EG  A +KG   N ++ +   A   V Y+ +K  +
Sbjct: 252 GTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKFV 297
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=3.6e-51  Score=349.20  Aligned_cols=253  Identities=26%  Similarity=0.386  Sum_probs=221.5

Q ss_pred             CCCCCCC--------CCCCCcHHHHHHHHHHhcCcccccccchhhhhccccccceehhhhHHHHHhHHHHHhhccccccc
Q 023023            1 MQVQNPH--------SIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEA   72 (288)
Q Consensus         1 lQ~q~~~--------~~~~~~~~~~~~~i~~~eG~~~l~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (288)
                      ||+|...        ..+|+++++++++|+++||++|||||+.+++++.++..+++|.+|+.+++.+.       .. ..
T Consensus        29 lQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~-------~~-~~  100 (303)
T 2lck_A           29 LQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYT-------KG-SE  100 (303)
T ss_dssp             SSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHS-------CC-CS
T ss_pred             HHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHh-------cC-Cc
Confidence            6777532        35799999999999999999999999999999999999999999999965432       11 01


Q ss_pred             ccchHHHHHHHHHHHHhHhhhcchHHHHHHHHhcccCC-CCCccCcHHHHHHHHHhhcCccccccChhhhhhhhchhhhH
Q 023023           73 ELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK-SPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGL  151 (288)
Q Consensus        73 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~  151 (288)
                      ..+....+++|++||+++.++++|+|++|+|+|++... ....|++.++++++++++||++|||+|+.+++++.++..++
T Consensus       101 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i  180 (303)
T 2lck_A          101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCA  180 (303)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHH
Confidence            36678899999999999999999999999999998643 33468999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcccccccccccCCCCcccccc
Q 023023          152 NFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLE  231 (288)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~  231 (288)
                      +|.+||.+++.+....       ....+....+++|++||++++++++|+|+||+|+|.+..                ..
T Consensus       181 ~f~~ye~~k~~l~~~~-------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~----------------~~  237 (303)
T 2lck_A          181 ELVTYDLIKDTLLKAN-------LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL----------------GQ  237 (303)
T ss_dssp             HHHHHHHHHHTTTTTT-------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS----------------SS
T ss_pred             HHHHHHHHHHHHHhcc-------CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc----------------cc
Confidence            9999999999775431       113346678999999999999999999999999998752                25


Q ss_pred             cCcHHHHHHHHHhhhccccccccchhhhhhhhhhhhHHHHHHHHHHHHhcccc
Q 023023          232 YNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEM  284 (288)
Q Consensus       232 ~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~~~~~~~~~  284 (288)
                      |.++++|+++++++||++|||||+.|+++|.+|..+++|.+||.+|+++....
T Consensus       238 y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          238 YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             CCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             cCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999886543
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 288
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-32
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  118 bits (296), Expect = 3e-32
 Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 31/283 (10%)

Query: 1   MQVQNPH-----SIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEA 55
           +QVQ+         +Y G I  +  I K +GF   ++GN  N  R  P  A+ F   ++ 
Sbjct: 34  LQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKY 93

Query: 56  SKGILWLYRRQTRNEEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP--R 113
            +          R+++        L +G  AG  ++   YP+D  R RL     K    R
Sbjct: 94  KQ---IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQR 150

Query: 114 QYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVD 173
           ++ G+ + +T + + +G R LY+G+  SV G+I Y    F VY++ K           + 
Sbjct: 151 EFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM---------LP 201

Query: 174 DNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYN 233
           D   + +            V   V+YP D +RRRM M             G+  A + Y 
Sbjct: 202 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS-----------GRKGADIMYT 250

Query: 234 GMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMV 276
           G VD +RK  + EG  A +KG   N ++ +   A   V Y+ +
Sbjct: 251 GTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEI 292
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=4.9e-45  Score=307.94  Aligned_cols=245  Identities=29%  Similarity=0.486  Sum_probs=209.7

Q ss_pred             CCCCCcHHHHHHHHHHhcCcccccccchhhhhccccccceehhhhHHHHHhHHHHHhhcccccccccchHHHHHHHHHHH
Q 023023            8 SIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIIPNSAVKFFSYEEASKGILWLYRRQTRNEEAELTPVLRLGAGACAG   87 (288)
Q Consensus         8 ~~~~~~~~~~~~~i~~~eG~~~l~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~   87 (288)
                      ...|+|+++++++++++||+++||||+.+.++...+...++|.+|+.+++.+...   ....+.........+++|.+|+
T Consensus        46 ~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~  122 (292)
T d1okca_          46 EKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG---VDRHKQFWRYFAGNLASGGAAG  122 (292)
T ss_dssp             GGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCTTTCHHHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcc---cccccccchhhhhhhhhhhhhh
Confidence            3578999999999999999999999999999999999999999999996554321   1122233344567788999999


Q ss_pred             HhHhhhcchHHHHHHHHhcccCCC--CCccCcHHHHHHHHHhhcCccccccChhhhhhhhchhhhHHHHHHHHHHHHHHh
Q 023023           88 IIAMSATYPMDMVRGRLTVQTEKS--PRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIK  165 (288)
Q Consensus        88 ~~~~~i~~Pld~ik~r~q~~~~~~--~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (288)
                      +++.++++|+|++|+|+|++....  .+.+.+..+.+++++++||+++||+|+.+++++.+++.+++|.+||.+|+.+.+
T Consensus       123 ~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~  202 (292)
T d1okca_         123 ATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD  202 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG
T ss_pred             hhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccc
Confidence            999999999999999999986532  346889999999999999999999999999999999999999999999975533


Q ss_pred             hccCCCCCCCCchhHHHHHHHHHHHHHhHhhhcccHHHHHHHHHhcccccccccccCCCCcccccccCcHHHHHHHHHhh
Q 023023          166 SKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRH  245 (288)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  245 (288)
                      .         ........++++.+++++++++++|+|+||+|+|.+.....           ....|.++++++++++++
T Consensus       203 ~---------~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~-----------~~~~y~~~~~~~~~i~~~  262 (292)
T d1okca_         203 P---------KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKG-----------ADIMYTGTVDCWRKIAKD  262 (292)
T ss_dssp             G---------GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCG-----------GGCSCSSHHHHHHHHHHH
T ss_pred             c---------cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCC-----------CCCCCCCHHHHHHHHHHh
Confidence            2         24457788999999999999999999999999999864322           234789999999999999


Q ss_pred             hccccccccchhhhhhhhhhhhHHHHHHHHH
Q 023023          246 EGFGALYKGLVPNSVKVVPSIAIAFVTYEMV  276 (288)
Q Consensus       246 eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~  276 (288)
                      ||++|||||+.|+++|.++ .++.|.+||.+
T Consensus       263 eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         263 EGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             cCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999999999999765 58999999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure