Citrus Sinensis ID: 023173

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Secondary Structure (PSIPRED)
cEEEccHHHHHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccHHHccccccccccccccccccccHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHccccHHHcEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEHEEHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHccccccHHHHHHHHHcHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYtwhnvtessrvttkhtFATLSFVAEIFIFLYVGMdaldiekwrfvkgspgtsVAASAMLMGLIMAGRAAFVFPlsfltnlakksptekisIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFglmtkplirlllphpkhttnhilsdpstpkslsqplleegqqdsyadlggptvprpgslrallttpthtVHYYWRkfddafmrpvfggrgfapfvpgsptersvrggq
Flexible Loop (DISEMBL)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLakksptekisikQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRgfapfvpgsptersvrggq
Low Complexity Region (SEG)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Disordered region (IsUnstruct)
*VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHP*******************************************LRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFV*************
Disordered Region (DISOPRED)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLL****************************************************TPTHTVHYYWRKFDDAFMRPVFGGRGFAPFV*************
Disordered Region (DISEMBL)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPG***********
Disordered Region (DISPRO)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHP***************SLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPG***********
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q56XP4	546	Sodium/hydrogen exchanger	yes	no	0.982	0.514	0.795	1e-129
Q68KI4	538	Sodium/hydrogen exchanger	no	no	0.968	0.514	0.755	1e-123
Q84WG1	503	Sodium/hydrogen exchanger	no	no	0.765	0.435	0.692	7e-82
Q8S397	529	Sodium/hydrogen exchanger	no	no	0.909	0.491	0.553	6e-76
Q552S0	674	Sodium/hydrogen exchanger	yes	no	0.765	0.324	0.295	3e-22
Q8R4D1	576	Sodium/hydrogen exchanger	yes	no	0.604	0.300	0.349	8e-22
Q4L208	575	Sodium/hydrogen exchanger	yes	no	0.604	0.300	0.349	1e-21
Q5ZJ75	574	Sodium/hydrogen exchanger	yes	no	0.604	0.301	0.349	2e-21
Q9Y2E8	581	Sodium/hydrogen exchanger	yes	no	0.604	0.297	0.343	3e-21
Q96T83	725	Sodium/hydrogen exchanger	no	no	0.842	0.332	0.303	1e-20

>sp|Q56XP4|NHX2_ARATH Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana GN=NHX2 PE=1 SV=2

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 226/284 (79%), Positives = 247/284 (86%), Gaps = 3/284 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELF LSGILTVFFCGIVMSHYTWHNVTESSR+TTKH FATLSF+AE F
Sbjct: 256 MMLMAYLSYMLAELFALSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFLAETF 315

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++LMGL+M GRAAFVFPLSFL+NLAKK  +E
Sbjct: 316 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILMGLVMLGRAAFVFPLSFLSNLAKKHQSE 375

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KISIKQQV+IWWAGLMRGAVSMALAYN+FTRSGHT+LR NAIMITSTITV LFST+VFG+
Sbjct: 376 KISIKQQVVIWWAGLMRGAVSMALAYNKFTRSGHTELRGNAIMITSTITVCLFSTMVFGM 435

Query: 181 MTKPLIRLLLPHPKHTTN--HILSDPSTPKSLSQPLLEEGQQDSYADLGG-PTVPRPGSL 237
           +TKPLIR L+PH K TT+   +LSD STPKS+  PLL+  Q DS+   G    VPRP SL
Sbjct: 436 LTKPLIRYLMPHQKATTSTTSMLSDDSTPKSIHIPLLDGEQLDSFELPGSHQDVPRPNSL 495

Query: 238 RALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           R  L  PT TVHYYWR+FDDAFMRPVFGGRGF PFVPGSPTERS
Sbjct: 496 RGFLMRPTRTVHYYWRQFDDAFMRPVFGGRGFVPFVPGSPTERS 539

Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity. Involved in vacuolar ion compartmentalization necessary for cell volume regulation and cytoplasmic Na(+) detoxification.
Arabidopsis thaliana (taxid: 3702)

>sp|Q68KI4|NHX1_ARATH Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana GN=NHX1 PE=1 SV=2

 Score =  441 bits (1134), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/282 (75%), Positives = 244/282 (86%), Gaps = 5/282 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELF LSGILTVFFCGIVMSHYTWHNVTESSR+TTKHTFATLSF+AE F
Sbjct: 254 MMLMAYLSYMLAELFDLSGILTVFFCGIVMSHYTWHNVTESSRITTKHTFATLSFLAETF 313

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDI+KWR V  +PGTS+A S++LMGL+M GRAAFVFPLSFL+NLAKK+ +E
Sbjct: 314 IFLYVGMDALDIDKWRSVSDTPGTSIAVSSILMGLVMVGRAAFVFPLSFLSNLAKKNQSE 373

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+   QV+IWW+GLMRGAVSMALAYN+FTR+GHT +R NAIMITSTITV LFSTVVFG+
Sbjct: 374 KINFNMQVVIWWSGLMRGAVSMALAYNKFTRAGHTDVRGNAIMITSTITVCLFSTVVFGM 433

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYAD-LGGPTVPRPGSLRA 239
           +TKPLI  LLPH   TT+ +LSD +TPKS+  PLL+   QDS+ +  G   VPRP S+R 
Sbjct: 434 LTKPLISYLLPHQNATTS-MLSDDNTPKSIHIPLLD---QDSFIEPSGNHNVPRPDSIRG 489

Query: 240 LLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
            LT PT TVHYYWR+FDD+FMRPVFGGRGF PFVPGSPTER+
Sbjct: 490 FLTRPTRTVHYYWRQFDDSFMRPVFGGRGFVPFVPGSPTERN 531

Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. Can also exchange Li(+) and Cs(+) with a lower affinity. Involved in vacuolar ion compartmentalization necessary for cell volume regulation and cytoplasmic Na(+) detoxification. Required during leaves expansion, probably to stimulate epidermal cell expansion. Confers competence to grow in high salinity conditions.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84WG1|NHX3_ARATH Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana GN=NHX3 PE=2 SV=2

 Score =  303 bits (777), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 160/231 (69%), Positives = 184/231 (79%), Gaps = 12/231 (5%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+L+AYLSYMLAELF+LS ILTVFFCGIVMSHYTWHNVT+ S+VTTKHTFA +SF+AEIF
Sbjct: 257 MMLLAYLSYMLAELFHLSSILTVFFCGIVMSHYTWHNVTDKSKVTTKHTFAAMSFLAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKW  V+ SPG S+  S++L+GLI+ GRAAFVFPLSFL+NL K SP E
Sbjct: 317 IFLYVGMDALDIEKWDVVRNSPGQSIGVSSILLGLILLGRAAFVFPLSFLSNLTKSSPDE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI +K+QV IWWAGLMRGAVSMALAYNQFT SGHT++  NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KIDLKKQVTIWWAGLMRGAVSMALAYNQFTTSGHTKVLGNAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHILS--------DPSTPKSLSQPLLEEGQQDSY 223
           +TKPL++ L P  K ++   L         DP     L +PLL    Q  Y
Sbjct: 437 LTKPLVKHLQPSSKQSSTTALQITLRSSFHDP----ILHEPLLSTQGQSEY 483

May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S397|NHX4_ARATH Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana GN=NHX4 PE=2 SV=2

 Score =  284 bits (726), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 151/273 (55%), Positives = 188/273 (68%), Gaps = 13/273 (4%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           MVLMAYLSYMLAELF LSGILTVFFCG++MSHY  +NVTESSR+T++H FA LSF+AE F
Sbjct: 254 MVLMAYLSYMLAELFSLSGILTVFFCGVLMSHYASYNVTESSRITSRHVFAMLSFIAETF 313

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKK--SP 118
           IFLYVG DALD  KW+    S G ++  S ++  L++ GRAAFVFPLS LTN   +    
Sbjct: 314 IFLYVGTDALDFTKWKTSSLSFGGTLGVSGVITALVLLGRAAFVFPLSVLTNFMNRHTER 373

Query: 119 TEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVF 178
            E I+ K QVIIWWAGLMRGAVS+ALA+ QFT SG T    NA M+T+T  VVLF+T+VF
Sbjct: 374 NESITFKHQVIIWWAGLMRGAVSIALAFKQFTYSGVTLDPVNAAMVTNTTIVVLFTTLVF 433

Query: 179 GLMTKPLIRLLLPH-PKHTTNH--ILSDPSTPK-SLSQPLLEEGQQDSYADLGGPTVPR- 233
           G +TKPL+  LLP    H T +    ++P +PK   + PLL      S+ +       R 
Sbjct: 434 GFLTKPLVNYLLPQDASHNTGNRGKRTEPGSPKEDATLPLL------SFDESASTNFNRA 487

Query: 234 PGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGG 266
             S+  L+  P +T+H YWRKFDD +MRP+FGG
Sbjct: 488 KDSISLLMEQPVYTIHRYWRKFDDTYMRPIFGG 520

May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q552S0|NHE1_DICDI Sodium/hydrogen exchanger 1 OS=Dictyostelium discoideum GN=nhe1 PE=2 SV=1

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 48/267 (17%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           MV+ +Y+SY+LA    +SG+L VFF GI ++ Y  ++++  +++T+   F T +F++E F
Sbjct: 350 MVMFSYMSYVLAGALDISGVLAVFFFGITLNQYGAYSLSPYTKLTSGQLFRTAAFISETF 409

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +FLY G+ +L   +++F  G    S+  + +        RA  VFP+ FL N   K+   
Sbjct: 410 LFLYFGL-SLTAHEFKFDLGLFSWSILFTCL-------ARAISVFPMCFLLNKFLKT--- 458

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI    QV IW+AGL RGA + +L+ +  +   H     NA + T+T+ VV+F+  VFG+
Sbjct: 459 KIPWVIQVAIWFAGL-RGAFAFSLSLDYISEDEHM----NAYIRTNTLLVVVFTIFVFGM 513

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
            T PL+R+L      T   +        ++S+P+ ++ +Q     L              
Sbjct: 514 GTYPLLRVLGIKTSQTDQSL-------DNISKPMSKQTKQKDRTKL-------------- 552

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGR 267
                      +  FDD + +P F  R
Sbjct: 553 -----------YESFDDKYFKPWFRKR 568

Regulation of intracellular pH homeostasis in response to cAMP, which is essential for chemotaxis. Necessary for F-actin localization and the kinetics of actin polymerization during chemotaxis and cell polarity but not for directional sensing.

Dictyostelium discoideum (taxid: 44689)

>sp|Q8R4D1|SL9A8_MOUSE Sodium/hydrogen exchanger 8 OS=Mus musculus GN=Slc9a8 PE=2 SV=1

 Score =  104 bits (259), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 16/189 (8%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct: 297 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 356

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct: 357 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 405

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ K   I+W++GL RGA+  AL+ +     G   + +  ++ T+TI +VLF+ ++ G 
Sbjct: 406 KITPKMMFIMWFSGL-RGAIPYALSLHL----GLEPMEKRQLIGTTTIVIVLFTILLLGG 460

Query: 181 MTKPLIRLL 189
            T PLIRL+
Sbjct: 461 STMPLIRLV 469

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Mus musculus (taxid: 10090)

>sp|Q4L208|SL9A8_RAT Sodium/hydrogen exchanger 8 OS=Rattus norvegicus GN=Slc9a8 PE=2 SV=1

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 16/189 (8%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct: 296 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 355

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct: 356 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 404

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ K   I+W++GL RGA+  AL+ +     G   + +  ++ T+TI +VLF+ ++ G 
Sbjct: 405 KITPKMMFIMWFSGL-RGAIPYALSLHL----GLEPMEKRQLIGTTTIIIVLFTILLLGG 459

Query: 181 MTKPLIRLL 189
            T PLIRL+
Sbjct: 460 STMPLIRLV 468

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Rattus norvegicus (taxid: 10116)

>sp|Q5ZJ75|SL9A8_CHICK Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 16/189 (8%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct: 295 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFMCETC 354

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct: 355 VFAFLGLSIFSFPH-KF-------EMSFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 403

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ K   I+W++GL RGA+  AL+ +     G   + +  ++ T+TI +VLF+ ++ G 
Sbjct: 404 KITPKMMFIMWFSGL-RGAIPYALSLHL----GLEPIEKRQLIGTTTIIIVLFTVLLLGG 458

Query: 181 MTKPLIRLL 189
            T PLIRL+
Sbjct: 459 GTMPLIRLI 467

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Gallus gallus (taxid: 9031)

>sp|Q9Y2E8|SL9A8_HUMAN Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 16/189 (8%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct: 302 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 361

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct: 362 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 410

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ K   I+W++GL RGA+  AL+ +         + +  ++ T+TI +VLF+ ++ G 
Sbjct: 411 KITPKMMFIMWFSGL-RGAIPYALSLHLDLEP----MEKRQLIGTTTIVIVLFTILLLGG 465

Query: 181 MTKPLIRLL 189
            T PLIRL+
Sbjct: 466 STMPLIRLM 474

Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q96T83|SL9A7_HUMAN Sodium/hydrogen exchanger 7 OS=Homo sapiens GN=SLC9A7 PE=1 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 36/277 (12%)

Query: 3   LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIF 62
           LM++ +++LAE    +G++ V FCGI  +HYT++N++  SR  TK  F  L F+AE FIF
Sbjct: 366 LMSWSTFLLAEACGFTGVVAVLFCGITQAHYTYNNLSVESRSRTKQLFEVLHFLAENFIF 425

Query: 63  LYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKI 122
            Y+G+     +K  F   SP   + A       I  GRAA ++PLSF  NL ++    KI
Sbjct: 426 SYMGLALFTFQKHVF---SPIFIIGAFVA----IFLGRAAHIYPLSFFLNLGRR---HKI 475

Query: 123 SIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLMT 182
               Q ++ ++GL RGA++ ALA     R   +  R+  +M T+T+ +V F+  + G  T
Sbjct: 476 GWNFQHMMMFSGL-RGAMAFALA----IRDTASYARQ--MMFTTTLLIVFFTVWIIGGGT 528

Query: 183 KPL-----IRLLLPHPKHTTNH-----ILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVP 232
            P+     IR+ +  P     +            P     P       DS+  L G    
Sbjct: 529 TPMLSWLNIRVGVEEPSEEDQNEHHWQYFRVGVDPDQDPPP-----NNDSFQVLQGDG-- 581

Query: 233 RPGSLRALLTTPTHT-VHYYWRKFDDAFMRPVFGGRG 268
            P S R   T      +   W  FD  +++P+    G
Sbjct: 582 -PDSARGNRTKQESAWIFRLWYSFDHNYLKPILTHSG 617

Mediates electroneutral exchange of protons for Na(+) and K(+) across endomembranes. May contribute to Golgi volume and cation homeostasis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
47679397	542	NHX1 [Citrus reticulata]	1.0	0.527	0.996	1e-166
15812035	542	sodium/proton exchanger [Citrus x paradi	1.0	0.527	0.989	1e-165
47679395	541	NHX1 [Citrus trifoliata]	1.0	0.528	0.982	1e-163
255964361	545	Na+/H+ exchanger 3 [Populus euphratica]	0.979	0.513	0.823	1e-134
166359599	545	Na+/H+ antiporter [Populus euphratica]	0.979	0.513	0.823	1e-134
359487875	539	PREDICTED: sodium/hydrogen exchanger 2-l	0.979	0.519	0.818	1e-133
89277236	545	Na+/H+ antiporter [Populus euphratica]	0.979	0.513	0.816	1e-133
298204985	540	unnamed protein product [Vitis vinifera]	0.979	0.518	0.818	1e-133
224125460	545	sodium proton exchanger [Populus trichoc	0.979	0.513	0.816	1e-133
255542438	544	sodium/hydrogen exchanger, putative [Ric	0.979	0.514	0.823	1e-133

>gi|47679397|gb|AAT36679.1| NHX1 [Citrus reticulata]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 285/286 (99%), Positives = 285/286 (99%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF
Sbjct: 257 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE
Sbjct: 317 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL
Sbjct: 377 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
           MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADL GPTVPRPGSLRAL
Sbjct: 437 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLVGPTVPRPGSLRAL 496

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 286
           LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Sbjct: 497 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 542

Source: Citrus reticulata

Species: Citrus reticulata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15812035|gb|AAK27314.2| sodium/proton exchanger [Citrus x paradisi]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/286 (98%), Positives = 284/286 (99%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF
Sbjct: 257 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
            FLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE
Sbjct: 317 TFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL
Sbjct: 377 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
           MT+PLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADL GPTVPRPGSLRAL
Sbjct: 437 MTEPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLVGPTVPRPGSLRAL 496

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 286
           LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Sbjct: 497 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 542

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47679395|gb|AAT36678.1| NHX1 [Citrus trifoliata]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/286 (98%), Positives = 282/286 (98%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF
Sbjct: 256 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 315

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE
Sbjct: 316 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 375

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KISIKQQVIIWWA LMR + SMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL
Sbjct: 376 KISIKQQVIIWWARLMRESNSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 435

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
           MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADL GPTVPRPGSLRAL
Sbjct: 436 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLVGPTVPRPGSLRAL 495

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 286
           LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ
Sbjct: 496 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVRGGQ 541

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255964361|gb|ACU01854.1| Na+/H+ exchanger 3 [Populus euphratica]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/283 (82%), Positives = 254/283 (89%), Gaps = 3/283 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 257 MILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++L+GL+M GRAAFVFPLSF++NL+KKSP E
Sbjct: 317 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVMVGRAAFVFPLSFVSNLSKKSPHE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI  +QQ IIWWAGLMRGAVSMALAYN+FT +GHT LR NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KIGFRQQFIIWWAGLMRGAVSMALAYNKFTSAGHTNLRANAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHI--LSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLR 238
           MTKPLI +LLPHPK+ +  +   SDP+TPKS + PLL EG QDS  DLGG  +PRP SLR
Sbjct: 437 MTKPLISILLPHPKYQSRSLSFSSDPATPKSFTVPLLGEG-QDSLDDLGGRDIPRPSSLR 495

Query: 239 ALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           ALLTTPTHTVHYYWRKFD+AFMRP+FGGRGF PFVPGSPTER+
Sbjct: 496 ALLTTPTHTVHYYWRKFDNAFMRPMFGGRGFVPFVPGSPTERN 538

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166359599|gb|ABY86892.1| Na+/H+ antiporter [Populus euphratica]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/283 (82%), Positives = 254/283 (89%), Gaps = 3/283 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 257 MILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++L+GL+M GRAAFVFPLSF++NL+KKSP E
Sbjct: 317 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVMVGRAAFVFPLSFVSNLSKKSPHE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI  +QQ IIWWAGLMRGAVSMALAYN+FT +GHT LR NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KIGFRQQFIIWWAGLMRGAVSMALAYNKFTSAGHTNLRANAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHI--LSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLR 238
           MTKPLI +LLPHPK+ +  +   SDP+TPKS + PLL EG QDS  DLGG  +PRP SLR
Sbjct: 437 MTKPLISILLPHPKYQSRSLSFSSDPATPKSFTVPLLGEG-QDSLDDLGGRDIPRPSSLR 495

Query: 239 ALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           ALLTTPTHTVHYYWRKFD+AFMRP+FGGRGF PFVPGSPTER+
Sbjct: 496 ALLTTPTHTVHYYWRKFDNAFMRPMFGGRGFVPFVPGSPTERN 538

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487875|ref|XP_002266345.2| PREDICTED: sodium/hydrogen exchanger 2-like [Vitis vinifera]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/281 (81%), Positives = 254/281 (90%), Gaps = 1/281 (0%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSY+LAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 257 MMLMAYLSYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  +PGTSVA S++L+GL++ GRAAFVFPLSFL+NLAKK+PTE
Sbjct: 317 IFLYVGMDALDIEKWRFVSKTPGTSVAVSSILIGLVLVGRAAFVFPLSFLSNLAKKNPTE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ +QQVIIWWAGLMRGAVS+ALAYNQF RSGHTQLR NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KITFRQQVIIWWAGLMRGAVSVALAYNQFARSGHTQLRSNAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
           MT+PLIR LLPH K+TT+ + SD STPKS + PLLE   Q+S AD+GG   PRP SLR L
Sbjct: 437 MTQPLIRFLLPHSKNTTSMVYSDSSTPKSFAVPLLESA-QNSDADMGGHGFPRPSSLRML 495

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           LTTP+ +VH+YWRKFDDA MRP+FGGRGF PFVPGSPTERS
Sbjct: 496 LTTPSRSVHHYWRKFDDAIMRPMFGGRGFVPFVPGSPTERS 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89277236|gb|ABD66754.1| Na+/H+ antiporter [Populus euphratica]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/283 (81%), Positives = 254/283 (89%), Gaps = 3/283 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 257 MILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++L+GL+M GRAAFVFPLSF++NL+KKSP E
Sbjct: 317 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVMVGRAAFVFPLSFVSNLSKKSPHE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI  +QQ IIWWAGLMRGAVSMALAYN+FT +GHT LR NAIMITSTITVVLFSTVVFG+
Sbjct: 377 KIGFRQQFIIWWAGLMRGAVSMALAYNKFTSAGHTNLRANAIMITSTITVVLFSTVVFGM 436

Query: 181 MTKPLIRLLLPHPKHTTNHI--LSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLR 238
           +TKPLI +LLPHPK+ +  +   SDP+TPKS + PLL EG QDS  DLGG  +PRP SLR
Sbjct: 437 LTKPLISILLPHPKYQSRSLSFSSDPATPKSFTVPLLGEG-QDSLDDLGGRDIPRPSSLR 495

Query: 239 ALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           ALLTTPTHTVHYYWRKFD+AFMRP+FGGRGF PFVPGSPTER+
Sbjct: 496 ALLTTPTHTVHYYWRKFDNAFMRPMFGGRGFVPFVPGSPTERN 538

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204985|emb|CBI34292.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/281 (81%), Positives = 254/281 (90%), Gaps = 1/281 (0%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSY+LAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 258 MMLMAYLSYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 317

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  +PGTSVA S++L+GL++ GRAAFVFPLSFL+NLAKK+PTE
Sbjct: 318 IFLYVGMDALDIEKWRFVSKTPGTSVAVSSILIGLVLVGRAAFVFPLSFLSNLAKKNPTE 377

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI+ +QQVIIWWAGLMRGAVS+ALAYNQF RSGHTQLR NAIMITSTITVVLFSTVVFGL
Sbjct: 378 KITFRQQVIIWWAGLMRGAVSVALAYNQFARSGHTQLRSNAIMITSTITVVLFSTVVFGL 437

Query: 181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL 240
           MT+PLIR LLPH K+TT+ + SD STPKS + PLLE   Q+S AD+GG   PRP SLR L
Sbjct: 438 MTQPLIRFLLPHSKNTTSMVYSDSSTPKSFAVPLLESA-QNSDADMGGHGFPRPSSLRML 496

Query: 241 LTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           LTTP+ +VH+YWRKFDDA MRP+FGGRGF PFVPGSPTERS
Sbjct: 497 LTTPSRSVHHYWRKFDDAIMRPMFGGRGFVPFVPGSPTERS 537

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125460|ref|XP_002319592.1| sodium proton exchanger [Populus trichocarpa] gi|222857968|gb|EEE95515.1| sodium proton exchanger [Populus trichocarpa]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/283 (81%), Positives = 254/283 (89%), Gaps = 3/283 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKH FATLSFVAEIF
Sbjct: 257 MILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++L+GL+M GRAAFVFPLSF++NL+KKSP E
Sbjct: 317 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVMVGRAAFVFPLSFVSNLSKKSPNE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI  +QQ IIWWAGLMRGAVSMALAYN+FT +GHT LR NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KIGFRQQFIIWWAGLMRGAVSMALAYNKFTSAGHTNLRANAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTNHI--LSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLR 238
           MTKPLI +LLPHPK+ +  +   SD +TPKS++ PLL EG QDS  DLGG  +PRP SLR
Sbjct: 437 MTKPLISILLPHPKYQSRSLSFSSDAATPKSVTVPLLGEG-QDSLDDLGGHDIPRPSSLR 495

Query: 239 ALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           ALLTTPTHTVHYYWRKFD+AFMRP+FGGRGF P+VPGSPTER+
Sbjct: 496 ALLTTPTHTVHYYWRKFDNAFMRPMFGGRGFVPYVPGSPTERN 538

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542438|ref|XP_002512282.1| sodium/hydrogen exchanger, putative [Ricinus communis] gi|223548243|gb|EEF49734.1| sodium/hydrogen exchanger, putative [Ricinus communis]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/283 (82%), Positives = 253/283 (89%), Gaps = 3/283 (1%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
           M+LMAYLSYMLAELF+LSGILTVFFCGIVMSHYTWHNVTESSRVT+KH FAT+SFVAEIF
Sbjct: 257 MMLMAYLSYMLAELFFLSGILTVFFCGIVMSHYTWHNVTESSRVTSKHAFATMSFVAEIF 316

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           IFLYVGMDALDIEKWRFV  SPGTSVA S++L+ L+M GRAAFVFPLSF++N  KKSPTE
Sbjct: 317 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLALVMVGRAAFVFPLSFVSNFFKKSPTE 376

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
           KI IKQQ +IWWAGLMRGAVSMALAYN+FT  GHT LR NAIMITSTITVVLFSTVVFGL
Sbjct: 377 KIGIKQQFVIWWAGLMRGAVSMALAYNKFTSLGHTHLRGNAIMITSTITVVLFSTVVFGL 436

Query: 181 MTKPLIRLLLPHPKHTTN--HILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLR 238
           MTKPLIRLLLPHPK T+    I S+P+TPKS++ PLL +  QDS  DLGG  VPRP S+R
Sbjct: 437 MTKPLIRLLLPHPKITSRSMSISSEPTTPKSVTVPLLGD-NQDSLDDLGGNDVPRPSSIR 495

Query: 239 ALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
           ALLTTPTHTVHYYWRKFDD+FMRPVFGGRGF PFVPGSPTERS
Sbjct: 496 ALLTTPTHTVHYYWRKFDDSFMRPVFGGRGFVPFVPGSPTERS 538

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2114810	546	NHX2 "sodium hydrogen exchange	0.979	0.512	0.796	2.3e-117
TAIR|locus:2181246	538	NHX1 "Na+/H+ exchanger 1" [Ara	0.968	0.514	0.755	1.8e-112
TAIR|locus:2081111	503	NHX4 "sodium hydrogen exchange	0.755	0.429	0.718	9.7e-80
TAIR|locus:2173972	529	NHX3 "AT5G55470" [Arabidopsis	0.909	0.491	0.553	2.3e-71
FB|FBgn0026787	649	Nhe1 "Na[+]/H[+] hydrogen exch	0.622	0.274	0.407	5.6e-27
WB|WBGene00003735	681	nhx-8 [Caenorhabditis elegans	0.601	0.252	0.373	9.2e-25
FB|FBgn0028703	711	Nhe3 "Na[+]/H[+] hydrogen exch	0.552	0.222	0.394	2.4e-24
UNIPROTKB|B4DIV9	281	SLC9A8 "cDNA FLJ61281, highly	0.604	0.615	0.343	1.4e-23
UNIPROTKB|B7Z3B1	362	SLC9A8 "cDNA FLJ61631, highly	0.604	0.477	0.343	1.4e-23
MGI|MGI:1924281	576	Slc9a8 "solute carrier family	0.604	0.300	0.349	2.5e-23

TAIR|locus:2114810 NHX2 "sodium hydrogen exchanger 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 227/285 (79%), Positives = 249/285 (87%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M+LMAYLSYMLAELF LSGILTVFFCGIVMSHYTWHNVTESSR+TTKH FATLSF+AE F
Sbjct:   256 MMLMAYLSYMLAELFALSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFLAETF 315

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             IFLYVGMDALDIEKWRFV  SPGTSVA S++LMGL+M GRAAFVFPLSFL+NLAKK  +E
Sbjct:   316 IFLYVGMDALDIEKWRFVSDSPGTSVAVSSILMGLVMLGRAAFVFPLSFLSNLAKKHQSE 375

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KISIKQQV+IWWAGLMRGAVSMALAYN+FTRSGHT+LR NAIMITSTITV LFST+VFG+
Sbjct:   376 KISIKQQVVIWWAGLMRGAVSMALAYNKFTRSGHTELRGNAIMITSTITVCLFSTMVFGM 435

Query:   181 MTKPLIRLLLPHPKHTTN--HILSDPSTPKSLSQPLLEEGQQDSYADLGGP--TVPRPGS 236
             +TKPLIR L+PH K TT+   +LSD STPKS+  PLL+  Q DS+ +L G    VPRP S
Sbjct:   436 LTKPLIRYLMPHQKATTSTTSMLSDDSTPKSIHIPLLDGEQLDSF-ELPGSHQDVPRPNS 494

Query:   237 LRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
             LR  L  PT TVHYYWR+FDDAFMRPVFGGRGF PFVPGSPTERS
Sbjct:   495 LRGFLMRPTRTVHYYWRQFDDAFMRPVFGGRGFVPFVPGSPTERS 539

GO:0005576 "extracellular region" evidence=ISM

GO:0006814 "sodium ion transport" evidence=ISS;RCA

GO:0015081 "sodium ion transmembrane transporter activity" evidence=ISS

GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISS;IDA

GO:0010107 "potassium ion import" evidence=IDA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IDA

GO:0015992 "proton transport" evidence=IDA

GO:0055075 "potassium ion homeostasis" evidence=IGI

GO:0090333 "regulation of stomatal closure" evidence=IGI

GO:0010351 "lithium ion transport" evidence=RCA

TAIR|locus:2181246 NHX1 "Na+/H+ exchanger 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
 Identities = 213/282 (75%), Positives = 244/282 (86%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M+LMAYLSYMLAELF LSGILTVFFCGIVMSHYTWHNVTESSR+TTKHTFATLSF+AE F
Sbjct:   254 MMLMAYLSYMLAELFDLSGILTVFFCGIVMSHYTWHNVTESSRITTKHTFATLSFLAETF 313

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             IFLYVGMDALDI+KWR V  +PGTS+A S++LMGL+M GRAAFVFPLSFL+NLAKK+ +E
Sbjct:   314 IFLYVGMDALDIDKWRSVSDTPGTSIAVSSILMGLVMVGRAAFVFPLSFLSNLAKKNQSE 373

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI+   QV+IWW+GLMRGAVSMALAYN+FTR+GHT +R NAIMITSTITV LFSTVVFG+
Sbjct:   374 KINFNMQVVIWWSGLMRGAVSMALAYNKFTRAGHTDVRGNAIMITSTITVCLFSTVVFGM 433

Query:   181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYAD-LGGPTVPRPGSLRA 239
             +TKPLI  LLPH   TT+ +LSD +TPKS+  PLL+   QDS+ +  G   VPRP S+R 
Sbjct:   434 LTKPLISYLLPHQNATTS-MLSDDNTPKSIHIPLLD---QDSFIEPSGNHNVPRPDSIRG 489

Query:   240 LLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERS 281
              LT PT TVHYYWR+FDD+FMRPVFGGRGF PFVPGSPTER+
Sbjct:   490 FLTRPTRTVHYYWRQFDDSFMRPVFGGRGFVPFVPGSPTERN 531

GO:0005576 "extracellular region" evidence=ISM

GO:0015081 "sodium ion transmembrane transporter activity" evidence=IGI;ISS

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;IGI;ISS;IDA;TAS

GO:0035725 "sodium ion transmembrane transport" evidence=IGI;ISS;IDA;TAS

GO:0000325 "plant-type vacuole" evidence=TAS

GO:0009651 "response to salt stress" evidence=IMP;TAS

GO:0005774 "vacuolar membrane" evidence=TAS

GO:0006814 "sodium ion transport" evidence=IGI;IC;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048366 "leaf development" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0055075 "potassium ion homeostasis" evidence=IGI

GO:0090333 "regulation of stomatal closure" evidence=IGI

GO:0006869 "lipid transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0010351 "lithium ion transport" evidence=IGI;RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2081111 NHX4 "sodium hydrogen exchanger 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 156/217 (71%), Positives = 181/217 (83%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M+L+AYLSYMLAELF+LS ILTVFFCGIVMSHYTWHNVT+ S+VTTKHTFA +SF+AEIF
Sbjct:   257 MMLLAYLSYMLAELFHLSSILTVFFCGIVMSHYTWHNVTDKSKVTTKHTFAAMSFLAEIF 316

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             IFLYVGMDALDIEKW  V+ SPG S+  S++L+GLI+ GRAAFVFPLSFL+NL K SP E
Sbjct:   317 IFLYVGMDALDIEKWDVVRNSPGQSIGVSSILLGLILLGRAAFVFPLSFLSNLTKSSPDE 376

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI +K+QV IWWAGLMRGAVSMALAYNQFT SGHT++  NAIMITSTITVVLFSTVVFGL
Sbjct:   377 KIDLKKQVTIWWAGLMRGAVSMALAYNQFTTSGHTKVLGNAIMITSTITVVLFSTVVFGL 436

Query:   181 MTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEE 217
             +TKPL++ L P  K ++   L   +   S   P+L E
Sbjct:   437 LTKPLVKHLQPSSKQSSTTALQI-TLRSSFHDPILHE 472

GO:0006812 "cation transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA;ISS;RCA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015081 "sodium ion transmembrane transporter activity" evidence=ISS

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0010351 "lithium ion transport" evidence=RCA

TAIR|locus:2173972 NHX3 "AT5G55470" [Arabidopsis thaliana (taxid:3702)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 151/273 (55%), Positives = 188/273 (68%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             MVLMAYLSYMLAELF LSGILTVFFCG++MSHY  +NVTESSR+T++H FA LSF+AE F
Sbjct:   254 MVLMAYLSYMLAELFSLSGILTVFFCGVLMSHYASYNVTESSRITSRHVFAMLSFIAETF 313

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSP-- 118
             IFLYVG DALD  KW+    S G ++  S ++  L++ GRAAFVFPLS LTN   +    
Sbjct:   314 IFLYVGTDALDFTKWKTSSLSFGGTLGVSGVITALVLLGRAAFVFPLSVLTNFMNRHTER 373

Query:   119 TEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVF 178
              E I+ K QVIIWWAGLMRGAVS+ALA+ QFT SG T    NA M+T+T  VVLF+T+VF
Sbjct:   374 NESITFKHQVIIWWAGLMRGAVSIALAFKQFTYSGVTLDPVNAAMVTNTTIVVLFTTLVF 433

Query:   179 GLMTKPLIRLLLPHP-KHTTNHI--LSDPSTPKS-LSQPLLEEGQQDSYADLGGPTVPRP 234
             G +TKPL+  LLP    H T +    ++P +PK   + PLL      S+ +       R 
Sbjct:   434 GFLTKPLVNYLLPQDASHNTGNRGKRTEPGSPKEDATLPLL------SFDESASTNFNRA 487

Query:   235 -GSLRALLTTPTHTVHYYWRKFDDAFMRPVFGG 266
               S+  L+  P +T+H YWRKFDD +MRP+FGG
Sbjct:   488 KDSISLLMEQPVYTIHRYWRKFDDTYMRPIFGG 520

GO:0006814 "sodium ion transport" evidence=ISS;RCA

GO:0015081 "sodium ion transmembrane transporter activity" evidence=ISS

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=ISS;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0055075 "potassium ion homeostasis" evidence=IMP

GO:0010351 "lithium ion transport" evidence=RCA

FB|FBgn0026787 Nhe1 "Na[+]/H[+] hydrogen exchanger 1" [Drosophila melanogaster (taxid:7227)]

 Score = 311 (114.5 bits), Expect = 5.6e-27, P = 5.6e-27
 Identities = 79/194 (40%), Positives = 120/194 (61%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M++  Y  Y+LAE  +LSGI+ + FCGIVMSHYT  N++  +++T + T  TL+F+AE  
Sbjct:   342 MLMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVTQITMQQTMRTLAFIAETC 401

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             +F Y+G+ A+    + F K     S    A+++ LI  GRA  +FPL+FL N   K    
Sbjct:   402 VFAYLGL-AI----FSF-KHQVELSFVIWAIVLCLI--GRACNIFPLAFLVN---KFREH 450

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI+ K Q I+W++GL RGA+S AL+ +    S   Q + + I IT+T+ +VLF+T+V G 
Sbjct:   451 KINNKMQFIMWFSGL-RGAISYALSLHLNLDS---QEKRHVI-ITTTLIIVLFTTLVLGG 505

Query:   181 MTKPLIRLLLPHPK 194
              T P+++ L P  K
Sbjct:   506 STMPVLKYLKPGKK 519

GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS;NAS

GO:0006885 "regulation of pH" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00003735 nhx-8 [Caenorhabditis elegans (taxid:6239)]

 Score = 291 (107.5 bits), Expect = 9.2e-25, P = 9.2e-25
 Identities = 71/190 (37%), Positives = 108/190 (56%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             +++ +Y+ Y  AE   LSGI+ + FCGI MS +T HNV+  +++T +HTF T+SFVAE  
Sbjct:   348 LLIFSYIPYGFAEALDLSGIMAILFCGISMSQFTRHNVSPIAQITFRHTFRTISFVAETS 407

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
              F Y+GM    I K  F       SV        L + GRA  VFPL++L N  +K    
Sbjct:   408 TFAYIGMAFFTI-KLNFAPWLIFWSVV-------LCLLGRACNVFPLAYLVNQCRKDV-- 457

Query:   121 KISIKQQVIIWWAGLMRGAVSMALA-YNQFTRSGHTQLRENAIMITSTITVVLFSTVVFG 179
             +IS+K Q+I+W++G MRGAV  AL  Y    +       + +I++T+ + ++LF+T+  G
Sbjct:   458 QISMKNQIIMWFSG-MRGAVCFALVLYMDLDKE------KKSILLTTVLFLILFTTIFLG 510

Query:   180 LMTKPLIRLL 189
                 P I  +
Sbjct:   511 GSALPFISFI 520

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

FB|FBgn0028703 Nhe3 "Na[+]/H[+] hydrogen exchanger 3" [Drosophila melanogaster (taxid:7227)]

 Score = 275 (101.9 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
 Identities = 67/170 (39%), Positives = 102/170 (60%)

Query:     2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFI 61
             VLM+Y +++LAE   L+G++ V FCGI  +HYT++N++E SR  TK  F  L+F+AE FI
Sbjct:   342 VLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFI 401

Query:    62 FLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEK 121
             F Y+G+      K  F  G   T+   +A+       GRA  V+PLS+L N+ K+ P  K
Sbjct:   402 FSYIGVSMFTFPKHHFDAGFIITAFICAAI-------GRAVNVYPLSWLLNI-KRKP--K 451

Query:   122 ISIKQQVIIWWAGLMRGAVSMALAY-NQFTRSGHTQLRENAIMITSTITV 170
             IS   Q ++++AGL RGA+S ALA  N  +    T L   ++++  T+ +
Sbjct:   452 ISTNFQHMLFFAGL-RGAMSFALAIRNTVSDERQTMLTATSLIVIFTVVI 500

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006885 "regulation of pH" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

UNIPROTKB|B4DIV9 SLC9A8 "cDNA FLJ61281, highly similar to Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 65/189 (34%), Positives = 108/189 (57%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct:     2 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 61

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct:    62 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 110

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI+ K   I+W++GL RGA+  AL+ +         + +  ++ T+TI +VLF+ ++ G 
Sbjct:   111 KITPKMMFIMWFSGL-RGAIPYALSLHLDLEP----MEKRQLIGTTTIVIVLFTILLLGG 165

Query:   181 MTKPLIRLL 189
              T PLIRL+
Sbjct:   166 STMPLIRLM 174

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0051453 "regulation of intracellular pH" evidence=IEA

UNIPROTKB|B7Z3B1 SLC9A8 "cDNA FLJ61631, highly similar to Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 65/189 (34%), Positives = 108/189 (57%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct:    83 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 142

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct:   143 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 191

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI+ K   I+W++GL RGA+  AL+ +         + +  ++ T+TI +VLF+ ++ G 
Sbjct:   192 KITPKMMFIMWFSGL-RGAIPYALSLHLDLEP----MEKRQLIGTTTIVIVLFTILLLGG 246

Query:   181 MTKPLIRLL 189
              T PLIRL+
Sbjct:   247 STMPLIRLM 255

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IEA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IEA

GO:0051453 "regulation of intracellular pH" evidence=IEA

MGI|MGI:1924281 Slc9a8 "solute carrier family 9 (sodium/hydrogen exchanger), member 8" [Mus musculus (taxid:10090)]

 Score = 276 (102.2 bits), Expect = 2.5e-23, P = 2.5e-23
 Identities = 66/189 (34%), Positives = 109/189 (57%)

Query:     1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIF 60
             M++ AYL Y LAE   LSGI+ + F GIVMSHYT HN++  +++  + T  T++F+ E  
Sbjct:   297 MIIFAYLPYGLAEGISLSGIMAILFSGIVMSHYTHHNLSPVTQILMQQTLRTVAFLCETC 356

Query:    61 IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
             +F ++G+        +F        ++     + L++ GRA  +FPLS+L N  +     
Sbjct:   357 VFAFLGLSIFSFPH-KF-------EISFVIWCIVLVLFGRAVNIFPLSYLLNFFRD---H 405

Query:   121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
             KI+ K   I+W++GL RGA+  AL+ +     G   + +  ++ T+TI +VLF+ ++ G 
Sbjct:   406 KITPKMMFIMWFSGL-RGAIPYALSLHL----GLEPMEKRQLIGTTTIVIVLFTILLLGG 460

Query:   181 MTKPLIRLL 189
              T PLIRL+
Sbjct:   461 STMPLIRLV 469

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IDA

GO:0006814 "sodium ion transport" evidence=IDA

GO:0006885 "regulation of pH" evidence=IEA

GO:0015297 "antiporter activity" evidence=IEA

GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA

GO:0015385 "sodium:hydrogen antiporter activity" evidence=IDA

GO:0015386 "potassium:hydrogen antiporter activity" evidence=IDA

GO:0015992 "proton transport" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035725 "sodium ion transmembrane transport" evidence=IDA

GO:0051453 "regulation of intracellular pH" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q56XP4	NHX2_ARATH	No assigned EC number	0.7957	0.9825	0.5146	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
TIGR00840	559	TIGR00840, b_cpa1, sodium/hydrogen exchanger 3	1e-29
COG0025	429	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport	7e-20
pfam00999	370	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang	1e-16
TIGR00831	525	TIGR00831, a_cpa1, Na+/H+ antiporter, bacterial fo	8e-10
COG3263	574	COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antip	3e-06
PRK05326	562	PRK05326, PRK05326, potassium/proton antiporter; R	2e-05
COG0475	397	COG0475, KefB, Kef-type K+ transport systems, memb	0.001

>gnl|CDD|233147 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3

 Score =  116 bits (293), Expect = 1e-29
 Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 22/190 (11%)

Query: 3   LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIF 62
           L++YLSY+ AE  +LSGIL + FCGI M  Y   N++  S+ T K+    LS ++E  IF
Sbjct: 245 LISYLSYLFAETLHLSGILALIFCGITMKKYVEANMSRRSQTTIKYFMKMLSSLSETLIF 304

Query: 63  LYVGMDALD---IEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPT 119
           +++G+  +       W FV          + +   +I   R   V  LS++TN  +    
Sbjct: 305 IFLGVSLVTENHEWNWAFV---------VATLSFCVIY--RVLGVRTLSWITNEFRPVE- 352

Query: 120 EKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFG 179
             I  K Q++I++AGL RGAV+ ALA                + +T+T+ VV F+ +  G
Sbjct: 353 --IPYKDQLVIFYAGL-RGAVAFALALL----LDEKIFPYKFLFVTTTLVVVFFTVIFQG 405

Query: 180 LMTKPLIRLL 189
              KPL+ +L
Sbjct: 406 GTIKPLVEVL 415

The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 559

>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]

 Score = 88.5 bits (220), Expect = 7e-20
 Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 15/189 (7%)

Query: 2   VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYT-WHNVTESSRVTTKHTFATLSFVAEIF 60
           +L+A+ +Y+LAE   +SGIL V   G+V+      +    S+R+     +  L F+    
Sbjct: 231 LLLAFAAYLLAEALGVSGILAVVVAGLVLGEAVRINLSPASARLRLSSFWEVLDFLLNGL 290

Query: 61  IFLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTE 120
           +F+ +G                   +    + +  ++  R  +VF        +     +
Sbjct: 291 LFVLLGAQLPLSLLLALG-------LLGLLVALVAVLLARPLWVFL---SLKGSNLKLRD 340

Query: 121 KISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGL 180
            +  ++++ + WAG  RG VS+ALA                +++     V+LFS +V GL
Sbjct: 341 PLPWRERLFLSWAG-PRGVVSLALA---LLIPLELPGPARELILFIVFLVILFSLLVQGL 396

Query: 181 MTKPLIRLL 189
              PL + L
Sbjct: 397 TLPPLAKKL 405

Length = 429

>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 27/182 (14%)

Query: 2   VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFI 61
           + +A L+ +LAEL  LSGIL  F  G+V+S+Y       ++ ++ K        +     
Sbjct: 216 LALALLAALLAELLGLSGILGAFLAGLVLSNY-----AFANELSEK-LEPFGYGLFLPLF 269

Query: 62  FLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEK 121
           F+ VG+          +     + +    +L+  I+ G+   VF L+ L           
Sbjct: 270 FVSVGLSL-------DLSSLLLSLLLLVLLLLVAILLGKLLGVFLLARLL---------G 313

Query: 122 ISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFSTVVFGLM 181
           +S+++ +I+ + GL RGAVS+ALA       G      +  + T  + VVL +T++  L+
Sbjct: 314 LSLREALIVGFGGLQRGAVSLALAA-----IGLQLGLIDRELYTLLVAVVLLTTLLKPLL 368

Query: 182 TK 183
            K
Sbjct: 369 KK 370

Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. Length = 370

>gnl|CDD|129911 TIGR00831, a_cpa1, Na+/H+ antiporter, bacterial form

 Score = 58.7 bits (142), Expect = 8e-10
 Identities = 39/194 (20%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 2   VLMAYLSYMLAELFYLSGILTVFFCGIVMSHY-TWHNVTESSRVTTKHTFATLSFVAEIF 60
           +L  +  ++LAE F+ SG++ V   G+++++Y    +++ ++R+     ++ + F+    
Sbjct: 215 ILAPFAGFLLAERFHFSGVIAVVAAGLILTNYGRDFSMSPTTRLIALDFWSVIVFLVNGI 274

Query: 61  IFLYVGMD---ALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRA--AFVFPLSFLTNLAK 115
           IF+ +G+     +    W+ +  +P   + A      +I        F++ +   +N   
Sbjct: 275 IFILIGVQTPGTIF-SAWKEILVAPAAVILALFTNAFVIYPVMTYVRFLWTMKPFSNRFL 333

Query: 116 KSPTEKISIKQQVIIWWAGLMRGAVSMA--LAYNQFTRSGHTQLRENAIMITSTITVVLF 173
           K    +   + + ++ WAGL RGA+ +A  L++     SG        ++  +   V+LF
Sbjct: 334 KKKPMEFGTRWKHVVSWAGL-RGAIPLALALSFPNQLLSGMAFPARYELVFLAAG-VILF 391

Query: 174 STVVFGLMTKPLIR 187
           S +V G+     ++
Sbjct: 392 SLLVQGISLPIFVK 405

The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 525

>gnl|CDD|225802 COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 5   AYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLY 64
             L + L      SGIL V+  G+++      N    +R      F  L+++A+I +FL 
Sbjct: 230 GLLIFSLTGAIGGSGILAVYLAGLLLG-----NRPIRARHGILRFFDGLAWLAQILMFLV 284

Query: 65  VGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISI 124
           +G+          V  S    +A  A+L+ L M        PL+    L       + + 
Sbjct: 285 LGL---------LVTPSQLLPIAIPAILLSLWM---IFVARPLAVFLGLIPF----RFNR 328

Query: 125 KQQVIIWWAGLMRGAVSMALA 145
           ++++ + W GL RGAV + LA
Sbjct: 329 REKLFVSWVGL-RGAVPIILA 348

Length = 574

>gnl|CDD|235410 PRK05326, PRK05326, potassium/proton antiporter; Reviewed

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 28/145 (19%)

Query: 4   MAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFL 63
            A L + L      SG L V+  G+V+      N     R +    F  L+++A+I +FL
Sbjct: 231 GALLIFALTAALGGSGFLAVYLAGLVLG-----NRPIRHRHSILRFFDGLAWLAQIGMFL 285

Query: 64  YVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVF---PLSFLTNLAKKSPTE 120
            +G+          V  S    +A  A+L+ L +      +    PL+   +L       
Sbjct: 286 VLGL---------LVTPSRLLDIALPALLLALFL------ILVARPLAVFLSLLPF---- 326

Query: 121 KISIKQQVIIWWAGLMRGAVSMALA 145
           + ++++++ I W GL RGAV + LA
Sbjct: 327 RFNLREKLFISWVGL-RGAVPIVLA 350

Length = 562

>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 42/201 (20%)

Query: 1   MVLMAYLSYMLAELFYLSGILTVFFCGIVMS--HYTWHNVTESSRVTTKHTFATLSFVAE 58
           ++  AYL    AEL  LS IL  F  G+++S   Y  H + E              F   
Sbjct: 231 VLGAAYL----AELLGLSMILGAFLAGLLLSESEYRKHELEEK----------IEPFGDG 276

Query: 59  IFI---FLYVGMDALDIEKWRFVKGSPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAK 115
           +FI   F+ VGM +LD+       G    ++    +L+ L + G+    +  + L   +K
Sbjct: 277 LFIPLFFISVGM-SLDL-------GVLLENLLLILLLVALAILGKILGAYLAARLLGFSK 328

Query: 116 KSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITSTITVVLFST 175
           +           + I       G  +  LA              +  ++T+ + + + +T
Sbjct: 329 RL---------ALGIGLLLRQGGEFAFVLA------GIALGSAISEALLTAVVILSMITT 373

Query: 176 VVFGLMTKPLIRLLLPHPKHT 196
            +  L+T  L++ LL   +  
Sbjct: 374 PILPLLTPILLKRLLKKSEDE 394

Length = 397

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG1965	575	consensus Sodium/hydrogen exchanger protein [Inorg	100.0
KOG1966	670	consensus Sodium/hydrogen exchanger protein [Inorg	100.0
TIGR00840	559	b_cpa1 sodium/hydrogen exchanger 3. This model is	100.0
TIGR00831	525	a_cpa1 Na+/H+ antiporter, bacterial form. This mod	99.97
COG0025	429	NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg	99.94
COG3263	574	NhaP-type Na+/H+ and K+/H+ antiporters with a uniq	99.87
PRK05326	562	potassium/proton antiporter; Reviewed	99.86
TIGR00844	810	c_cpa1 na(+)/h(+) antiporter. This model is specif	99.78
PF00999	380	Na_H_Exchanger: Sodium/hydrogen exchanger family;	99.29
KOG4505	467	consensus Na+/H+ antiporter [Inorganic ion transpo	98.42
PRK03659	601	glutathione-regulated potassium-efflux system prot	98.03
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.65
PRK10669	558	putative cation:proton antiport protein; Provision	97.6
PLN03159	832	cation/H(+) antiporter 15; Provisional	97.48
COG0475	397	KefB Kef-type K+ transport systems, membrane compo	97.29
TIGR00932	273	2a37 transporter, monovalent cation:proton antipor	95.63
TIGR00844	810	c_cpa1 na(+)/h(+) antiporter. This model is specif	91.38

>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.4e-48  Score=376.48  Aligned_cols=274  Identities=43%  Similarity=0.644  Sum_probs=222.6

Q ss_pred             ChhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccC
Q 023173            1 MVLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKG   80 (286)
Q Consensus         1 mll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~   80 (286)
                      |++++|.+|++||.+|+|||+||++|||+|+||+++|+|+++|.++||+|++++|++|++||+|+|+++++.++|.+.  
T Consensus       273 ~ll~sY~sY~lAE~~~lSGIvtVlFcGI~msHYt~~NlS~~Sqit~kh~f~~lsflAEtfIF~Y~Gl~~f~~~k~~~~--  350 (575)
T KOG1965|consen  273 MLLMSYLSYLLAEGCGLSGIVTVLFCGIVMSHYTYHNLSGESQITTKHFFRTLSFLAETFIFIYLGLSAFDFQKHVYK--  350 (575)
T ss_pred             HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccceeee--
Confidence            689999999999999999999999999999999999999999999999999999999999999999999999888653  


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-CCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccc
Q 023173           81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSP-TEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRE  159 (286)
Q Consensus        81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~-~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~  159 (286)
                          ++.+..++.++|+++|++.|||++.+.|+.||.+ ..+++.|+|.+|||+|+||||+++|||+....+.+.   ..
T Consensus       351 ----~~~fv~~~~vlV~lgRa~nvfPLs~L~N~~rr~k~~~~i~~~~q~~~~w~g~lRGAvs~ALa~~~~~~~~~---~~  423 (575)
T KOG1965|consen  351 ----SLQFVFGAGVLVLLGRAANVFPLSFLLNLFRRHKECDLIDDKYQVIMWWAGGLRGAVSFALALGDFTDSPH---TG  423 (575)
T ss_pred             ----chHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccccChHHhhHhHhhhhhhHHHHHHHHhhhcccccc---cc
Confidence                2233456678899999999999999999998643 345999999999999955999999999987543221   14


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCcc-----------------CCCCCCCCCcccccccccccC-
Q 023173          160 NAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHI-----------------LSDPSTPKSLSQPLLEEGQQD-  221 (286)
Q Consensus       160 ~~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~-----------------~~~~~~~~~~~~~ll~~~~~~-  221 (286)
                      +++|+++|..||++|+++.|.++.|++++|.++.+......                 ....+.+++.+.+.....+.. 
T Consensus       424 ~q~i~tttl~vVlfT~lv~Gg~T~pml~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~~i~~~~~~~~~~  503 (575)
T KOG1965|consen  424 GQTIFTTTLVVVLFTVLVFGGSTKPMLSYLMISVGVAADEVDESWRLEPGVEFYLVTKLGVLSLTSSAYITILQLRQAEL  503 (575)
T ss_pred             ccEEEEeeeeeeeeeeeeeCCccHHHHHHhcccccccccccchhhhccccccccccccccccccccccCcchhhhhhhhh
Confidence            68999999999999999999999999999998765433100                 001112334444432221110 


Q ss_pred             CcCCCCCCCCCCCCcccccccCCcchhhchHhhhhccccccccCCCCCCcCCCCCCCccCCC
Q 023173          222 SYADLGGPTVPRPGSLRALLTTPTHTVHYYWRKFDDAFMRPVFGGRGFAPFVPGSPTERSVR  283 (286)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~fd~~ymrp~f~~~~~~~~~~~~~~~~~~~  283 (286)
                      .+|+...++.+++.+.+....++++..|.+||++|+..+++.+++||.+|..|..|.+...+
T Consensus       504 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  565 (575)
T KOG1965|consen  504 FDEPTRSSDSRFLLSLGFFQLTYTSLTHLYGRIFSRTSMRHIFGQRGLVPLKPNPPIRKLPN  565 (575)
T ss_pred             ccccCCccCccccccccceeeeecccccccccccCcchhcccccccCcccCCCCcccccCCc
Confidence            03333333456778899999999999999999999999999999999999999999876543

>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.1e-48  Score=375.72  Aligned_cols=230  Identities=28%  Similarity=0.526  Sum_probs=210.7

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh-hhhhccC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE-KWRFVKG   80 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~-~w~~~~~   80 (286)
                      +++||++|+.||.+|+|||+|+++||+.|++|...|+++++..+.++|.+++|..+|++||+++|+++.+.. +|++   
T Consensus       276 f~~pYlaYL~aEm~hlSgIlAii~CG~~m~~Yv~~Nis~~s~~tvky~~K~lss~sEt~IF~fLGvs~v~~~h~wd~---  352 (670)
T KOG1966|consen  276 FLLPYLAYLTAEMFHLSGILAIIFCGLCMKKYVEANISQKSATTVKYFMKMLSSLSETVIFMFLGVSTVSSNHHWDF---  352 (670)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhccchhhheeehhhhcCCcceeeh---
Confidence            689999999999999999999999999999999999999999999999999999999999999999998763 5653   


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023173           81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN  160 (286)
Q Consensus        81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~  160 (286)
                            .+.++++++|++.|+++|+.+++++|.+|   ..|+++.||++|+++|| ||||+++|.+.++    +...|.+
T Consensus       353 ------~Fi~~T~~fc~~~R~lgv~~lt~~~N~fr---~~k~~~~DQfimsyGGL-RGAiaF~LV~lid----~~~vp~K  418 (670)
T KOG1966|consen  353 ------AFICLTLVFCLIYRAIGVVVLTWFLNKFR---MVKLEFVDQFIMSYGGL-RGAIAFGLVVLID----GAKVPAK  418 (670)
T ss_pred             ------hhhhhHHHHHHHHHHHHhhhhhhhhhhhh---eeeccccceeeeecCCc-chhhheeEEEEec----cccCCcc
Confidence                  34467889999999999999999999987   47999999999999998 9999999999875    2468999


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCccCCCCCCCCCcccccccccccCCcCCCCCCCCCCCCccccc
Q 023173          161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL  240 (286)
Q Consensus       161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
                      ++++++|++||+||+++||+|++|+++||++++++.     .+++..|++|.+++|+.++| +||++|+           
T Consensus       419 ~~Fvttti~VIfFTVflQGiTIkplvk~L~Vk~~~~-----~~~~m~e~i~~~~~dhlm~g-IEDi~G~-----------  481 (670)
T KOG1966|consen  419 NMFVTTTIAVIFFTVFLQGITIKPLVKFLKVKRKNK-----RDPTMNEEIYNRLLDHLMAG-IEDIAGQ-----------  481 (670)
T ss_pred             cceEeeeeEEEeeeeeecccchHHHHHHHccccccc-----cCchhhHHHHHHHHHHHHHH-HHHHhcc-----------
Confidence            999999999999999999999999999999987654     25667899999999999999 9999986           


Q ss_pred             ccCCcchhhchHhhhhccccccccCCC
Q 023173          241 LTTPTHTVHYYWRKFDDAFMRPVFGGR  267 (286)
Q Consensus       241 ~~~~~~~~~~~w~~fd~~ymrp~f~~~  267 (286)
                        +++++..+.|++||++|+||++.++
T Consensus       482 --~gh~~~rdk~~~fn~kylrp~L~r~  506 (670)
T KOG1966|consen  482 --KGHYYWRDKFERFNNKYLRPLLMRH  506 (670)
T ss_pred             --cccchhhhhHHHHHhhhchHHHhhh
Confidence              4678889999999999999999997

>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3

Probab=100.00  E-value=2e-44  Score=358.34  Aligned_cols=231  Identities=29%  Similarity=0.434  Sum_probs=203.2

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh-hhhhhccC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI-EKWRFVKG   80 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~-~~w~~~~~   80 (286)
                      ++++|++|.+||.+|+||++|+++||++|++|...|++++++.+.++||+++++++|+++|+++|+++... ..|+    
T Consensus       244 l~~~yl~Y~lAE~l~~SGiLAvv~aGl~~~~y~~~n~s~~~~~~~~~f~~~ls~l~e~~IFvlLGl~l~~~~~~~~----  319 (559)
T TIGR00840       244 FLISYLSYLFAETLHLSGILALIFCGITMKKYVEANMSRRSQTTIKYFMKMLSSLSETLIFIFLGVSLVTENHEWN----  319 (559)
T ss_pred             HHHHHHHHHHHHHhccchHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH----
Confidence            67899999999999999999999999999999999999999999999999999999999999999987654 2342    


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023173           81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN  160 (286)
Q Consensus        81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~  160 (286)
                           +.+.++++++|+++|+++|++++++.|..+   ..++++++|++++|+|+ ||+||+|||+.++.    ...+.+
T Consensus       320 -----~~~i~~~l~~~ll~R~l~V~~~~~~~~~~~---~~~~~~~e~~il~w~Gl-RGaVa~aLAl~l~~----~~~~~~  386 (559)
T TIGR00840       320 -----WAFVVATLSFCVIYRVLGVRTLSWITNEFR---PVEIPYKDQLVIFYAGL-RGAVAFALALLLDE----KIFPYK  386 (559)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCChhhhhheeeecc-ccHHHHHHHHhCCC----CCcchH
Confidence                 223345677889999999999999998775   46899999999999997 99999999998742    346889


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCCCCccCCCCCCCCCcccccccccccCCcCCCCCCCCCCCCccccc
Q 023173          161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGPTVPRPGSLRAL  240 (286)
Q Consensus       161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
                      ++++++|+.||++|+++||+|++|++++|+++++++     ++++..|++|.+++|+.+.+ .||++|+           
T Consensus       387 ~~i~~~t~~VVl~TvlvqG~T~~pl~~~L~l~~~~~-----~~~~~~e~~~~~~~~~~~~~-ie~~~g~-----------  449 (559)
T TIGR00840       387 FLFVTTTLVVVFFTVIFQGGTIKPLVEVLKVKKGCI-----SKTKINEELHDREFDHLLPG-IEDICGQ-----------  449 (559)
T ss_pred             HHHHHHHHeeehHHHHHHHhhHHHHHHHhCCCCCcc-----chhhHHHHHHHHHHHHHHhH-HHHHhhh-----------
Confidence            999999999999999999999999999999977553     24556789999999999998 9999986           


Q ss_pred             ccCCcchhhchHhhhhccccccccCCCC
Q 023173          241 LTTPTHTVHYYWRKFDDAFMRPVFGGRG  268 (286)
Q Consensus       241 ~~~~~~~~~~~w~~fd~~ymrp~f~~~~  268 (286)
                        .++++..+.|++||+||+||++.++.
T Consensus       450 --~~~~~~~~~~~~~~~~~~~~~l~~~~  475 (559)
T TIGR00840       450 --IGHDRAIDKLNGFDIKYLLKPLIRRN  475 (559)
T ss_pred             --cchHHHHHHHHHHhhhhChHhhcCCc
Confidence              35688889999999999999999963

This model is specific for the eukaryotic members members of this family.

>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form

Probab=99.97  E-value=2.1e-29  Score=249.92  Aligned_cols=190  Identities=19%  Similarity=0.383  Sum_probs=149.4

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhcccccc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh--hhhhc
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWH-NVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE--KWRFV   78 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~-nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~--~w~~~   78 (286)
                      ++++|++|.+||.+|+||++|+++||++++++... +.+++.+...++||+++++++|+++|+++|++++...  .|...
T Consensus       215 l~~~~~~y~lAe~lg~SgilAvv~aGl~l~~~~~~~~~~~~~~~~~~~fw~~l~~ll~~~iFvllGl~l~~~~~~~~~~~  294 (525)
T TIGR00831       215 ILAPFAGFLLAERFHFSGVIAVVAAGLILTNYGRDFSMSPTTRLIALDFWSVIVFLVNGIIFILIGVQTPGTIFSAWKEI  294 (525)
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHHHHHHHccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            57899999999999999999999999999999877 7888999999999999999999999999999987642  23211


Q ss_pred             cCCCc-hHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhc-cC
Q 023173           79 KGSPG-TSV---AASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTR-SG  153 (286)
Q Consensus        79 ~~~~~-~~~---~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~-~~  153 (286)
                      ..... ..+   ...++++..+.+.|+++++.  .+.|+..+++..+++|+++++++|+|+ ||++|+|+|+.+|.. .+
T Consensus       295 ~~~~~~~~~~~~~~~~~i~~~~~~~r~~~~~~--~~~~~~~~~~~~~~~~r~~~v~~w~G~-RG~vslA~al~~p~~~~~  371 (525)
T TIGR00831       295 LVAPAAVILALFTNAFVIYPVMTYVRFLWTMK--PFSNRFLKKKPMEFGTRWKHVVSWAGL-RGAIPLALALSFPNQLLS  371 (525)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcccCCCChhhHHHheeccc-hHHHHHHHHHHccccccC
Confidence            00000 001   11233445566778766554  233443333446789999999999995 999999999998742 33


Q ss_pred             CCcccchhHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCC
Q 023173          154 HTQLRENAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPK  194 (286)
Q Consensus       154 ~~~~~~~~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~  194 (286)
                      +.++|+|+.+++++++||++|+++||+|+||+++++++.++
T Consensus       372 g~~~p~r~~i~~~~~~vVl~TllvqG~tlp~l~r~l~~~~~  412 (525)
T TIGR00831       372 GMAFPARYELVFLAAGVILFSLLVQGISLPIFVKRKFVSEH  412 (525)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCCCC
Confidence            35789999999999999999999999999999999998653

This model is specific for the bacterial members of this family.

>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]

Probab=99.94  E-value=1.1e-25  Score=218.30  Aligned_cols=179  Identities=25%  Similarity=0.369  Sum_probs=149.4

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTE-SSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKG   80 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~-~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~   80 (286)
                      +..++.+|.+||.+|.||++|++++|++++++...+.+. +.|...++|||.+++++|+++|+++|.++.....+..   
T Consensus       231 L~~~~~~~~~a~~l~~SGilAvvvaG~~~~~~~~~~~~~~~~~~~~~~fwe~l~~~ln~~iFiLlG~~i~~~~~~~~---  307 (429)
T COG0025         231 LLLAFAAYLLAEALGVSGILAVVVAGLVLGEAVRINLSPASARLRLSSFWEVLDFLLNGLLFVLLGAQLPLSLLLAL---  307 (429)
T ss_pred             HHHHHHHHHHHHHhCcchHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh---
Confidence            568999999999999999999999999998555556555 4588999999999999999999999999987643221   


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccch
Q 023173           81 SPGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLREN  160 (286)
Q Consensus        81 ~~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~  160 (286)
                          .+...+++.+.++++|+++||+.....+  + +...+.+++++++++|+|+ ||++++|+|+..+....  + +.+
T Consensus       308 ----~~~~~l~~~~~~~v~R~~~V~~~~~~~~--~-~~~~~~~~~~~~~l~w~G~-RG~vsla~al~~p~~~~--~-~~~  376 (429)
T COG0025         308 ----GLLGLLVALVAVLLARPLWVFLSLKGSN--L-KLRDPLPWRERLFLSWAGP-RGVVSLALALLIPLELP--G-PAR  376 (429)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHHHhhcc--c-cccCCCCHHHHHHHhhccc-ccHHHHHHHHHchhhcc--c-hhh
Confidence                1333456678899999999999987655  1 1235789999999999996 99999999999874322  2 679


Q ss_pred             hHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCC
Q 023173          161 AIMITSTITVVLFSTVVFGLMTKPLIRLLLPHPK  194 (286)
Q Consensus       161 ~~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~  194 (286)
                      +.++..++.+|++|+++||.+++|+.+++...++
T Consensus       377 ~~i~~i~~~vIl~Sl~v~g~t~~~l~~~~~~~~~  410 (429)
T COG0025         377 ELILFIVFLVILFSLLVQGLTLPPLAKKLEVSEE  410 (429)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHHhccCcc
Confidence            9999999999999999999999999999988543

>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]

Probab=99.87  E-value=8e-22  Score=186.44  Aligned_cols=169  Identities=22%  Similarity=0.318  Sum_probs=143.1

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      +..+.++|.+++.+|.||++||..||++.+|..     -++|+.+.+|++-++++++..+|+.+|+.+...+.|..    
T Consensus       227 la~~Ll~fs~t~aiGGsG~LaVYl~Gll~GN~~-----i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~i----  297 (574)
T COG3263         227 LAGGLLIFSLTGAIGGSGILAVYLAGLLLGNRP-----IRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPI----  297 (574)
T ss_pred             HHHHHHHHHHHHHhcCcccHHHHHHHHHhCCCc-----chhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhHh----
Confidence            345788999999999999999999999999764     46788999999999999999999999998887776653    


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA  161 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~  161 (286)
                         .+...++.+.+++++|++.||....         ..|.+++|..+++|.|| ||||++.||.....    .+.+...
T Consensus       298 ---avPailL~l~mifvaRP~aV~l~l~---------Pfrf~~~Ek~fvSWvGL-RGAv~IilAifpm~----aglena~  360 (574)
T COG3263         298 ---AIPAILLSLWMIFVARPLAVFLGLI---------PFRFNRREKLFVSWVGL-RGAVPIILAIFPMM----AGLENAR  360 (574)
T ss_pred             ---hHHHHHHHHHHHHHHhHHHHHHhhc---------ccccCccchheeehhhc-ccchhhhHhhhHHh----cCCccce
Confidence               2334456678899999999987642         24588999999999999 99999999986432    2467778


Q ss_pred             HHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCC
Q 023173          162 IMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHT  196 (286)
Q Consensus       162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~  196 (286)
                      +++.+++.||+.|+++||.|++|..+++++..+++
T Consensus       361 l~FNvAF~VVLvSlliQG~tl~~~a~~l~~i~p~~  395 (574)
T COG3263         361 LFFNVAFFVVLVSLLIQGSTLPWAAKKLKVIVPPR  395 (574)
T ss_pred             EEeehhHHHHHHHHHHccCcchHHHHhcccccCCC
Confidence            89999999999999999999999999999876553

>PRK05326 potassium/proton antiporter; Reviewed

Probab=99.86  E-value=7.6e-21  Score=190.28  Aligned_cols=169  Identities=24%  Similarity=0.330  Sum_probs=134.8

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      +.+++++|.+||.+|+||++|+++||+++++...     +.+...+++++.++++++.+.|+++|+.+......+.    
T Consensus       229 l~~~l~~~~~a~~lg~Sg~la~~iaGl~l~n~~~-----~~~~~i~~~~~~l~~l~~~~~Fv~lGl~~~~~~l~~~----  299 (562)
T PRK05326        229 LAGALLIFALTAALGGSGFLAVYLAGLVLGNRPI-----RHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDI----  299 (562)
T ss_pred             HHHHHHHHHHHHHHCCcHHHHHHHHHHHHhCCcc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH----
Confidence            4678999999999999999999999999997532     3345688999999999999999999998754321111    


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA  161 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~  161 (286)
                         .+...++.+++++++|+++++....         ..+++++|+.+++|+|+ ||++++++|.....    ...+..+
T Consensus       300 ---~~~~l~i~~~l~~vaR~l~v~l~~~---------~~~~~~~e~~~i~~~g~-RG~v~i~lA~~~~~----~~~~~~~  362 (562)
T PRK05326        300 ---ALPALLLALFLILVARPLAVFLSLL---------PFRFNLREKLFISWVGL-RGAVPIVLATFPMM----AGLPNAQ  362 (562)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHc---------cCCCCHhhhheeeeecc-hhHHHHHHHHHHHH----cCCCchh
Confidence               1111223345678999999986642         24789999999999997 99999999975421    2356677


Q ss_pred             HHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCCC
Q 023173          162 IMITSTITVVLFSTVVFGLMTKPLIRLLLPHPKHT  196 (286)
Q Consensus       162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~~~~~~  196 (286)
                      .++.+++.+|++|+++||.+++|+++++++.++++
T Consensus       363 ~~~~~~~~vvl~S~~i~g~tl~~~a~~l~l~~~~~  397 (562)
T PRK05326        363 LIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPE  397 (562)
T ss_pred             hhhhhhheeeHHHHHHHHhhHHHHHHHcCCCCCCC
Confidence            88999999999999999999999999999976554

>TIGR00844 c_cpa1 na(+)/h(+) antiporter

Probab=99.78  E-value=2.9e-18  Score=174.43  Aligned_cols=171  Identities=15%  Similarity=0.125  Sum_probs=123.8

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      +.+++++|.+|+.+|+||+||||+||+++++..+.    ..+....+||+.++.++|.++|+++|+.++...... . .-
T Consensus       249 LaLAli~~gla~lLggSGfLAVFVAGl~~gn~~~~----~~~~~~~~f~e~ie~LLn~~lFVlLGa~L~~~~l~~-~-~l  322 (810)
T TIGR00844       249 LILALTCAGFGSMLGVDDLLVSFFAGTAFAWDGWF----AQKTHESNVSNVIDVLLNYAYFVYLGSILPWKDFNN-G-DI  322 (810)
T ss_pred             HHHHHHHHHHHHHhccccHHHHHHHHHHHhcccch----hhhHHHhhHHHHHHHHHHHHHHHHHHHhhCHhhccc-c-hh
Confidence            45789999999999999999999999999987542    112334679999999999999999999876432100 0 00


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhh-cc-CCCc---
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFT-RS-GHTQ---  156 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~-~~-~~~~---  156 (286)
                      ....|...++.++++++.|+..|+.+..+.       +...+++++++++|.|+ ||+.|+..+..... .. +...   
T Consensus       323 ~~~~w~~ilLaL~LifVrRPpaVlll~~li-------~~~~s~rErlFigWFGp-RGIGSIyyl~~A~~~~~~~~~~~~~  394 (810)
T TIGR00844       323 GLDVWRLIILSLVVIFLRRIPAVLILKPLI-------PDIKSWREAMFIGHFGP-IGVGAVFAAILSKSQLESHLTDEET  394 (810)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------ccCCCHHHHHHheeecc-ccHHHHHHHHHHHHhhhcccCcccc
Confidence            011233345667788899998887654322       23468999999999997 99999985554321 01 0000   


Q ss_pred             ---------c---cchhHHHHHHHHHHHHHHhhhhhcHHHHH
Q 023173          157 ---------L---RENAIMITSTITVVLFSTVVFGLMTKPLI  186 (286)
Q Consensus       157 ---------~---~~~~~i~~~t~~vVl~S~lv~G~t~~pl~  186 (286)
                               .   ...+.+..+|..+|+.|++|||+++.|++
T Consensus       395 ~~~~~~~~~~~~~~~~~~lw~iv~f~V~~SIivHG~S~~~l~  436 (810)
T TIGR00844       395 PLNVTPGKGSKHWQLMACIWPITCFSIVTSVIVHGSSVAVIM  436 (810)
T ss_pred             cccccccccchhhhHHHHHHHHHHHHHHHHHhhccccchHHH
Confidence                     0   01468999999999999999999999985

This model is specific for the fungal members of this family.

>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ]

Probab=99.29  E-value=8.4e-13  Score=125.46  Aligned_cols=162  Identities=26%  Similarity=0.354  Sum_probs=20.2

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      +.+++..|.+||.+|.||+++++++|+.+++...+   ++.++..+++++   .+++.+.|+++|+.+....-..     
T Consensus       219 l~~~~~~~~~a~~~g~s~~l~af~~Gl~~~~~~~~---~~~~~~l~~~~~---~~~~~lfF~~iG~~~~~~~l~~-----  287 (380)
T PF00999_consen  219 LALILLLYGLAEILGLSGILGAFIAGLILSNSPFA---ERLEEKLESFWY---GFFIPLFFVFIGMSLDFSSLFN-----  287 (380)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhhhccccccccccccceeeeeehcccccccc---chhhhcccchhh---HHHhhHHhhhhccccccccccc-----
Confidence            56788999999999999999999999999954322   233334555555   8899999999999887321100     


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA  161 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~  161 (286)
                      ....+...++.++.++++|++.++..+..         .+.++|++..++|++..||.++++++......    +....+
T Consensus       288 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~l~la~~~~~~----~~~~~~  354 (380)
T PF00999_consen  288 SPSVIILVLLLLIAILLGKFIGVYLASRL---------FGIPWKEALFIGLGMLPRGEVSLALALIALNL----GIISEQ  354 (380)
T ss_dssp             --------------------------------------------HHHHTTTTSS--HHHHHHHHHHHHH-----------
T ss_pred             chhhhhhHHHHHHHHHHhhhceeehhhhh---------cccccchhHHHHHhhcCccHHHHHHHHHHHhc----CCCCHH
Confidence            01123333455667779999999876542         46899999999999955999999999876431    223334


Q ss_pred             HHHHHHHHHHHHHHhhhhhcHHHHHHH
Q 023173          162 IMITSTITVVLFSTVVFGLMTKPLIRL  188 (286)
Q Consensus       162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~  188 (286)
                      + .+.+..++++|++++|.+++|+++|
T Consensus       355 ~-~~~~~~~vl~t~ii~~~~~~~l~~~  380 (380)
T PF00999_consen  355 M-FTIIIAAVLLTIIIAGIILSPLLRK  380 (380)
T ss_dssp             ---------------------------
T ss_pred             H-HHHheeeeeeHHHHHHHHHHHHhcC
Confidence            4 8888999999999999999999886

These proteins are found in organisms across all domains of life. In archaea, bacteria, yeast and plants, these exchangers provide increased salt tolerance by removing sodium in exchanger for extracellular protons. In mammals they participate in the regulation of cell pH, volume, and intracellular sodium concentration, as well as for the reabsorption of NaCl across renal, intestinal, and other epithelia [, , , ]. Human NHE is also involved in heart disease, cell growth and in cell differentiation []. The removal of intracellular protons in exchange for extracellular sodium effectively eliminates excess acid from actively metabolising cells. In mammalian cells, NHE activity is found in both the plasma membrane and inner mitochondrial membrane. To date, nine mammalian isoforms have been identified (designated NHE1-NHE9) [, ]. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N terminus and a large cytoplasmic region at the C terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. There is some evidence that the exchangers may exist in the cell membrane as homodimers, but little is currently known about the mechanism of their antiport []. This entry represents a number of cation/proton exchangers, including Na+/H+ exchangers, K+/H+ exchangers and Na+(K+,Li+,Rb+)/H+ exchangers.; GO: 0015299 solute:hydrogen antiporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2L0E_A 2HTG_A 2KBV_A 2E30_B 1Y4E_A.

>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism]

Probab=98.42  E-value=5.4e-07  Score=83.98  Aligned_cols=169  Identities=17%  Similarity=0.194  Sum_probs=114.7

Q ss_pred             hHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhh-hhhhccCC
Q 023173            3 LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIE-KWRFVKGS   81 (286)
Q Consensus         3 l~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~-~w~~~~~~   81 (286)
                      .+++.+-.+.+.+|++-.+-.|++|++.+.-.|-  +.++  ...+.-+.+..+++..-|+|.|..++..+ +|...+.+
T Consensus       250 vl~lfc~gigtiiGvddLl~sFfAGi~Fswd~wF--sk~t--~~s~v~~viD~lls~sfF~yfGaiipwsqFn~s~~gl~  325 (467)
T KOG4505|consen  250 VLALFCMGIGTIIGVDDLLVSFFAGIVFSWDEWF--SKKT--KESRVSEVIDLLLSLSFFLYFGAIIPWSQFNLSVEGLP  325 (467)
T ss_pred             HHHHHHhhhhheechhHHHHHHHhhhhcchhHHh--hhhh--hhccHHHHHHHHHHHHHHHHhccccchhhcCCcccCch
Confidence            4566666777889999999999999999976553  2222  23456778889999999999998776432 33322223


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhc--cC--CCcc
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTR--SG--HTQL  157 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~--~~--~~~~  157 (286)
                      .|..++   +.+.++++-|.-.||.+-++..       .-.+|||.+++.|.|+ -|.-++..|+..-..  ..  ....
T Consensus       326 vwrlvi---lsi~iif~RRip~v~l~kp~iP-------dikswkEALFvGhFGP-IGVgAly~allar~~le~~ep~~~i  394 (467)
T KOG4505|consen  326 VWRLVI---LSITIIFIRRIPAVYLMKPLIP-------DIKSWKEALFVGHFGP-IGVGALYYALLARKELETLEPEKSI  394 (467)
T ss_pred             HHHHHH---HHHHHHHhcccceEEEeccCCc-------chhhHHHHHHhccCCC-ccHHHHHHHHHHHhhhccCCccccc
Confidence            333332   3344556677766665544332       2348999999999997 999999988753210  00  0111


Q ss_pred             c--------chhHHHHHHHHHHHHHHhhhhhcHHHHH
Q 023173          158 R--------ENAIMITSTITVVLFSTVVFGLMTKPLI  186 (286)
Q Consensus       158 ~--------~~~~i~~~t~~vVl~S~lv~G~t~~pl~  186 (286)
                      +        -.+.++..+..+|+.|++|||.+.+-+.
T Consensus       395 ~~~e~~~w~li~~iwpivsf~vlsSIiVHG~sv~~~t  431 (467)
T KOG4505|consen  395 YESETVFWTLIEIIWPIVSFTVLSSIIVHGSSVAMYT  431 (467)
T ss_pred             CCccccchhhhhhhhhhhHHHHHHHHHhccchhhHHH
Confidence            1        1366888899999999999999986543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=98.03  E-value=0.00031  Score=71.48  Aligned_cols=119  Identities=13%  Similarity=0.113  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCc
Q 023173            4 MAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPG   83 (286)
Q Consensus         4 ~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~   83 (286)
                      +.+++-+++|.+|+|.++.+|++|+++++..   ..++.....+.|    .-++-.+.|+.+|+.+....-++       
T Consensus       224 ~vl~~a~l~~~~Gls~~LGAFlaGl~l~~s~---~~~~l~~~i~pf----~~lll~lFFi~vGm~id~~~l~~-------  289 (601)
T PRK03659        224 LVLGSALFMDALGLSMALGTFIAGVLLAESE---YRHELEIAIEPF----KGLLLGLFFISVGMALNLGVLYT-------  289 (601)
T ss_pred             HHHHHHHHHHHhCccHHHHHHHHHHHhcCCc---hHHHHHHHHHHH----HHHHHHHHHHHHhhhccHHHHHH-------
Confidence            4455556789999999999999999999732   122323333343    34566999999998775422111       


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhh-hcccchhHHHHHHHhh
Q 023173           84 TSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIW-WAGLMRGAVSMALAYN  147 (286)
Q Consensus        84 ~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~-w~GLmRGavslaLA~~  147 (286)
                       .+...+.++++.+++|++.++.....         .+.++++...++ +-.. ||-.++.++-.
T Consensus       290 -~~~~il~~~~~~l~~K~~~~~~~~~~---------~g~~~~~al~~g~~L~~-~Gef~~vl~~~  343 (601)
T PRK03659        290 -HLLWVLISVVVLVAVKGLVLYLLARL---------YGLRSSERMQFAGVLSQ-GGEFAFVLFSA  343 (601)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHhc-cccHHHHHHHH
Confidence             11112333456778999998876542         356787876555 3465 99888886654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.65  E-value=0.0012  Score=67.50  Aligned_cols=121  Identities=16%  Similarity=0.107  Sum_probs=78.3

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      +++++++.+++|.+|+|.++.+|++|+++++...       ++....-.+-+..++-.+-|+.+|+.+....-.+     
T Consensus       225 l~lv~~~a~la~~~Gls~~lGAFlAGl~l~~~~~-------~~~le~~i~pf~~lll~lFFi~vG~~id~~~l~~-----  292 (621)
T PRK03562        225 LFLVFGFGLLMEEVGLSMALGAFLAGVLLASSEY-------RHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLE-----  292 (621)
T ss_pred             HHHHHHHHHHHHHhCccHHHHHHHHHHHhcCCcc-------HHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHH-----
Confidence            4556778889999999999999999999996321       2223333333345666899999999774321111     


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHh
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAY  146 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~  146 (286)
                        ..+.+ +..+++.++++++.++....+         .++++++...+++.=--||-.++.++.
T Consensus       293 --~~~~i-l~~~~~~~~~K~~~~~~~~~~---------~g~~~~~a~~~gl~L~~~Gef~~vl~~  345 (621)
T PRK03562        293 --NPLRI-LILLLGFLAIKIAMLWLLARP---------LGVPRKQRRWFAVLLGQGGEFAFVVFG  345 (621)
T ss_pred             --HHHHH-HHHHHHHHHHHHHHHHHHHHH---------hCCCHhHHHHHHHHHhccccHHHHHHH
Confidence              01111 233445778999988876543         356788888877743226777777653

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.60  E-value=0.003  Score=63.61  Aligned_cols=141  Identities=18%  Similarity=0.140  Sum_probs=81.9

Q ss_pred             HHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCchHHH
Q 023173            8 SYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPGTSVA   87 (286)
Q Consensus         8 sY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~~~~~   87 (286)
                      ++..+|.+|+|.+++++++|++++...   ..++...   + ..-+..++-.+-|+.+|+.+.....++.        ..
T Consensus       239 a~~~~~~lGls~~lGAflaGl~l~~~~---~~~~~~~---~-~~~~~~~f~plFFv~~G~~~d~~~l~~~--------~~  303 (558)
T PRK10669        239 AFGAVELFDVSFALGAFFAGMVLNESE---LSHRAAH---D-TLPLRDAFAVLFFVSVGMLFDPMILIQQ--------PL  303 (558)
T ss_pred             HHHHHHHcCccHHHHHHHHHHHHhCCh---hHHHHHH---H-HhhHHHHHHHHHHHHhhhhcCHHHHHHH--------HH
Confidence            455679999999999999999998631   1111111   1 1112345677889999998754322221        11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchhHHHHHH
Q 023173           88 ASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENAIMITST  167 (286)
Q Consensus        88 ~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~~i~~~t  167 (286)
                      ..+..+++.+++|++.++.....         .+.++|+.+.++.+=--||..++.++..-.. .+.    -.+......
T Consensus       304 ~~~~~~~~~~v~K~~~~~~~~~~---------~g~~~~~a~~~gl~l~~~Gef~lii~~~~~~-~gi----i~~~~~~~~  369 (558)
T PRK10669        304 AVLATLAIIVFGKSLAAFFLVRL---------FGHSRRTALTIAASLAQIGEFAFILAGLGMA-LNL----LPQAGQNLV  369 (558)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---------hCCChhhHHHHHHHHhcccchHHHHHHHHHh-CCC----CCHHHHHHH
Confidence            11233455788999988865543         3456777777766422378888776654321 121    112233344


Q ss_pred             HHHHHHHHhh
Q 023173          168 ITVVLFSTVV  177 (286)
Q Consensus       168 ~~vVl~S~lv  177 (286)
                      ..++++|+++
T Consensus       370 v~~~~~t~~~  379 (558)
T PRK10669        370 LAGAILSIML  379 (558)
T ss_pred             HHHHHHHHHH
Confidence            5555666666

>PLN03159 cation/H(+) antiporter 15; Provisional

Probab=97.48  E-value=0.005  Score=65.07  Aligned_cols=123  Identities=11%  Similarity=0.108  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhccCCCc
Q 023173            4 MAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDIEKWRFVKGSPG   83 (286)
Q Consensus         4 ~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~~~w~~~~~~~~   83 (286)
                      +.+++.+++|.+|+|.++.+|++|+++.+-      +..+...+.+-.....++--+-|+..|+.+.-...+      ..
T Consensus       280 ~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~------~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~------~~  347 (832)
T PLN03159        280 GVMISGFITDAIGTHSVFGAFVFGLVIPNG------PLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQ------GP  347 (832)
T ss_pred             HHHHHHHHHHHhCccHHHHHHHHhhccCCc------chHHHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhc------Cc
Confidence            345667789999999999999999998841      111112223333334566778899999876432111      01


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhh
Q 023173           84 TSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYN  147 (286)
Q Consensus        84 ~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~  147 (286)
                      ..+.+.++++++.++++++..+....+         .++++++.+.+++.=-.||.+.+.++..
T Consensus       348 ~~~~~~~~liv~a~~gK~~g~~l~a~~---------~g~~~~eal~lG~lm~~kG~~~Lii~~i  402 (832)
T PLN03159        348 ATWGLLVLVIIMASAGKIMGTIIIAFF---------YTMPFREGITLGFLMNTKGLVEMIVLNV  402 (832)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHhcccHHHHHHHHH
Confidence            122222334455667888777655432         4688999988887533499988886654

>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]

Probab=97.29  E-value=0.018  Score=55.81  Aligned_cols=160  Identities=19%  Similarity=0.217  Sum_probs=91.0

Q ss_pred             hHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHH-HHHHHHHHHHhhcchhhhhhhhccCC
Q 023173            3 LMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSF-VAEIFIFLYVGMDALDIEKWRFVKGS   81 (286)
Q Consensus         3 l~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~-l~e~~IF~~lGl~~~~~~~w~~~~~~   81 (286)
                      .+.+.+=+++|.+|+|-++..|.+|+.++....+      ++..++-.+-+.. ++-.+-|+.+|+++....-++     
T Consensus       229 ~i~l~~a~l~e~~gls~ilGAFlaGl~ls~~~~~------~~~l~~~i~~~~~~~fiplFFi~vG~~~dl~~l~~-----  297 (397)
T COG0475         229 LLVLGAAYLAELLGLSMILGAFLAGLLLSESEYR------KHELEEKIEPFGDGLFIPLFFISVGMSLDLGVLLE-----  297 (397)
T ss_pred             HHHHHHHHHHHHhChhHHHHHHHHHHHhcccccc------hHHHHHHHHhHHhHHHHHHHHHHhhHHcCHHHHhc-----
Confidence            4455666789999999999999999999975422      1233344444455 777888999999886432111     


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCchhhhhhhhcccchhHHHHHHHhhhhhccCCCcccchh
Q 023173           82 PGTSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKKSPTEKISIKQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRENA  161 (286)
Q Consensus        82 ~~~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~~~~~~i~~~~~~ii~w~GLmRGavslaLA~~~~~~~~~~~~~~~~  161 (286)
                         .+...+....+..+.+.+..+....+.         +.+.+++...++..  |+...++++..-.   + .+....+
T Consensus       298 ---~~~~~l~~~~~~i~~K~~~~~~~~~~~---------g~~~~~~~~~g~~~--~~~ge~~~v~~~~---~-~~~~i~~  359 (397)
T COG0475         298 ---NLLLILLLVALAILGKILGAYLAARLL---------GFSKRLALGIGLLL--RQGGEFAFVLAGI---A-LGSAISE  359 (397)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCcHHHHHHHHhhh--hhhhHHHHHHHHh---c-ccchhHH
Confidence               111234455667788888777665432         34566666666654  5554444443321   1 1112233


Q ss_pred             HHHHHHHHHHHHHHhhhhhcHHHHHHHhCC
Q 023173          162 IMITSTITVVLFSTVVFGLMTKPLIRLLLP  191 (286)
Q Consensus       162 ~i~~~t~~vVl~S~lv~G~t~~pl~~~L~~  191 (286)
                      .+...+..+.++++.+--...+.+.++...
T Consensus       360 ~~~~~~v~~smi~t~i~~~~~~~~~~~~~~  389 (397)
T COG0475         360 ALLTAVVILSMITTPILPLLTPILLKRLLK  389 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            344433333444444333445555555443

>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family

Probab=95.63  E-value=0.043  Score=49.96  Aligned_cols=61  Identities=28%  Similarity=0.426  Sum_probs=47.0

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDA   69 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~   69 (286)
                      +.+.++.+.+||.+|.|++++++++|+.+++...       ++...+..+.+..+..-+-|+++|+.+
T Consensus       212 l~~~~~~~~la~~~g~s~~lgaf~aGl~~~~~~~-------~~~l~~~l~~~~~~f~plFF~~~G~~~  272 (273)
T TIGR00932       212 LLLMFGSAYFADLLGLSMALGAFLAGVVLSESEY-------RHKLESDLEPIGGVLLPLFFISVGMSV  272 (273)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHcCCch-------HHHHHHHHHhHHHHHHHHHHHHhCccC
Confidence            3467788899999999999999999999997421       223455555566777888889999754

>TIGR00844 c_cpa1 na(+)/h(+) antiporter

Probab=91.38  E-value=12  Score=39.69  Aligned_cols=71  Identities=11%  Similarity=0.133  Sum_probs=48.8

Q ss_pred             hhHHHHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 023173            2 VLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVAEIFIFLYVGMDALDI   72 (286)
Q Consensus         2 ll~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls~l~e~~IF~~lGl~~~~~   72 (286)
                      +++++++.+++|-+.+|..+..+.+|++++......+.+..-......+-.++.++-.++-+-.|+.+...
T Consensus        23 ll~~l~s~~lkeRl~Ls~~~v~Ll~GiilGP~~l~~idP~~~g~~d~i~leIteIvL~I~LFa~Gl~L~~~   93 (810)
T TIGR00844        23 SIFSLVSLFVKEKLYIGESMVASIFGLIVGPHCLNWFNPLSWGNTDSITLEISRILLCLQVFAVSVELPRK   93 (810)
T ss_pred             HHHHHHHHHHHhhcCCcHHHHHHHHHHHhhhhhhccCChhhcccchHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence            57889999999999999999999999999987654444432111122222266566666666667776543

This model is specific for the fungal members of this family.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
2k3c_A	33	TMIX peptide; membrane peptide, dodecylphosphochol	6e-05

>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle, NHE1, Na+/H+ transporter, metal transport; NMR {Synthetic} Length = 33

 Score = 38.5 bits (89), Expect = 6e-05
 Identities = 13/26 (50%), Positives = 21/26 (80%)

Query: 5  AYLSYMLAELFYLSGILTVFFCGIVM 30
          +Y++Y+ AELF+LSGI+ +   G+VM
Sbjct: 3  SYMAYLSAELFHLSGIMALIASGVVM 28

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
2k3c_A	33	TMIX peptide; membrane peptide, dodecylphosphochol	98.89
2kbv_A	28	Sodium/hydrogen exchanger 1; transmembrane, peptid	98.33
1zcd_A	388	Na(+)/H(+) antiporter 1; membrane protein; 3.45A {	94.37
2bec_B	43	Sodium/hydrogen exchanger 1; calcineurin-homologou	87.13

>2k3c_A TMIX peptide; membrane peptide, dodecylphosphocholine micelle, NHE1, Na+/H+ transporter, metal transport; NMR {Synthetic}

Probab=98.89  E-value=6.1e-12  Score=77.99  Aligned_cols=32  Identities=41%  Similarity=0.721  Sum_probs=29.8

Q ss_pred             hHHHHHHHHHHhhccchHHHHHHHHHHhcccc
Q 023173            3 LMAYLSYMLAELFYLSGILTVFFCGIVMSHYT   34 (286)
Q Consensus         3 l~aylsY~lAE~l~~SGIlAvv~~Gi~m~~y~   34 (286)
                      ++||++|++||.+|+|||+|+++||++|+||.
T Consensus         1 l~~y~~Yl~AE~~~lSGIlavv~~Gi~~~~y~   32 (33)
T 2k3c_A            1 XKSYMAYLSAELFHLSGIMALIASGVVMRPKK   32 (33)
T ss_dssp             -CCSTTTGGGSSSTTTTTTTTTTTTSCCCCCC
T ss_pred             ChhHHHHHHHHHhCcChHHHHHHHHHHHhhcc
Confidence            46899999999999999999999999999986

>2kbv_A Sodium/hydrogen exchanger 1; transmembrane, peptide, NHE1, micelle, alternative splicing, antiport, glycoprotein, ION transport, membrane; NMR {Synthetic}

Probab=98.33  E-value=2e-07  Score=55.10  Aligned_cols=24  Identities=46%  Similarity=0.699  Sum_probs=22.1

Q ss_pred             hhhhhhhhcccchhHHHHHHHhhhh
Q 023173          125 KQQVIIWWAGLMRGAVSMALAYNQF  149 (286)
Q Consensus       125 ~~~~ii~w~GLmRGavslaLA~~~~  149 (286)
                      ++|++|||+|| ||||+++|++..+
T Consensus         2 ~~Q~i~~~~GL-RGAvafaL~~~l~   25 (28)
T 2kbv_A            2 KDQFIIAYGGL-RGAIAFSLGYLLD   25 (28)
T ss_dssp             CHHHHTTTTSS-CHHHHHHHHHHHH
T ss_pred             CceeEEEeecc-hHHHHHHHHHhcc
Confidence            58999999998 9999999999875

>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A

Probab=94.37  E-value=0.074  Score=50.14  Aligned_cols=134  Identities=12%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             HHHHHHHHhhccchHHHHHHHHHHhccccccCCChhhHHHHHHHHHHHH--HHHHHHHHHHHhhcchhhhhhhhccCCCc
Q 023173            6 YLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLS--FVAEIFIFLYVGMDALDIEKWRFVKGSPG   83 (286)
Q Consensus         6 ylsY~lAE~l~~SGIlAvv~~Gi~m~~y~~~nls~~s~~~~~~f~~~ls--~l~e~~IF~~lGl~~~~~~~w~~~~~~~~   83 (286)
                      ...++.+|..|+..+++.|.+|+++.+..++..++  .+..+|-.+-++  ++.=.|-|...|+.+.... .+..    .
T Consensus       213 l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~--~~~le~~l~p~v~~~ilPlFaFanaGv~l~~~~-~~~l----~  285 (388)
T 1zcd_A          213 VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSP--AKRLEHVLHPWVAYLILPLFAFANAGVSLQGVT-LDGL----T  285 (388)
T ss_dssp             HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCH--HHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSC-CCTH----H
T ss_pred             HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCH--HHHHHHHHHHHHHHHHHHHHHHHhcCeeecccc-hhhc----c
Confidence            35556668889999999999999999754322222  344555555544  3445555888999885321 0000    0


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CCCCCCCchhhhhhhh-cccchhHHHHHHHhhhh
Q 023173           84 TSVAASAMLMGLIMAGRAAFVFPLSFLTNLAKK-SPTEKISIKQQVIIWW-AGLMRGAVSMALAYNQF  149 (286)
Q Consensus        84 ~~~~~~~~~~~~~lv~R~l~V~~~~~l~n~~~~-~~~~~i~~~~~~ii~w-~GLmRGavslaLA~~~~  149 (286)
                      ..+.  +.+.+.++++.++.++..+++.-+++. +..++.+|+|..-+++ +| +||.+++..+-.-+
T Consensus       286 ~~~~--lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~g-igftmsL~Ia~laf  350 (388)
T 1zcd_A          286 SILP--LGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCG-IGFTMSIFIASLAF  350 (388)
T ss_dssp             HHSS--TTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTT-CCHHHHHHHHHHHS
T ss_pred             ChHH--HHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhc-cchHHHHHHHHHhc
Confidence            0010  112334578999998887776543321 1234688999877666 78 59999998776543

>2bec_B Sodium/hydrogen exchanger 1; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} PDB: 2e30_B

Probab=87.13  E-value=0.0068  Score=39.26  Aligned_cols=38  Identities=18%  Similarity=0.275  Sum_probs=22.2

Q ss_pred             HHHhCCCCCCCCCccCCCCCCCCCcccccccccccCCcCCCCCC
Q 023173          186 IRLLLPHPKHTTNHILSDPSTPKSLSQPLLEEGQQDSYADLGGP  229 (286)
Q Consensus       186 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~  229 (286)
                      +++|.+++++.     .+++..|+++.+++|+.+.| +||++|+
T Consensus         1 V~~L~Vkr~~~-----~~~t~~e~ih~~~~dhlmaG-iEdi~G~   38 (43)
T 2bec_B            1 VDLLAVKKKQE-----TKRSINEEIHTQFLDHLLTG-IEDICGH   38 (43)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHH-HHHHHCC
T ss_pred             Ccceeeecccc-----ccccHHHHHhhhhhhhhhhc-hHhhcCC
Confidence            35777766543     24566789999999999999 9999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00