Citrus Sinensis ID: 023208

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccEEEEccccHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHcccccccccccccccccccEEEcccEEccccccccccccHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mrnsnhligLLNFFTFLLSipiigggiwlssranntdclkflqwpliVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAvtdkgsgrpvmdraysEYHLEDYsgwlkdrvtddsywgkisscirdskvcpkmrrvingapetadmfslrklnpvqsgcckppadcgfvyenetlwnpggglvgsnpdctrwsndqeqlcyqcdsckagVLASLKKSWRKVSVINIVVLIILVIFYVIGCAafrnnrridndepygearmtksrpsriqf
Flexible Loop (DISEMBL)
MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKIsscirdskvcpkmRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAafrnnrridndepygearmtksrpsriqf
Low Complexity Region (SEG)
MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMffiiaaligfiifayaVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKvsvinivvliilvifyviGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF
Disordered region (IsUnstruct)
*****HLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNN************************
Disordered Region (DISOPRED)
*R*SNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWN********NPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNNR***********************
Disordered Region (DISEMBL)
MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNNRRIDNDEPYG**************
Disordered Region (DISPRO)
*RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNNRRI*N*******************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	285	2.2.26 [Sep-21-2011]
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	yes	no	1.0	1.0	0.778	1e-129
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.971	0.847	0.736	1e-104
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.929	0.974	0.461	1e-69
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	no	no	0.936	0.978	0.476	3e-69
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.898	0.973	0.492	1e-67
Q9C7C1	282	Tetraspanin-6 OS=Arabidop	no	no	0.915	0.925	0.464	1e-57
Q9ZUN5	270	Tetraspanin-2 OS=Arabidop	no	no	0.933	0.985	0.439	6e-56
Q9FIQ5	269	Protein TORNADO 2 OS=Arab	no	no	0.936	0.992	0.457	1e-55
Q84WF6	281	Tetraspanin-5 OS=Arabidop	no	no	0.933	0.946	0.408	1e-54
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.905	0.952	0.409	1e-52

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/285 (77%), Positives = 242/285 (84%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGL+NF TFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLIVIG+SIMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRN  LM  YL VM  IIAALIGFIIFAYAVTDKGSGR V++R Y +Y+LEDYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRV+DDSYWGKISSC+RDS  C K+ R  NG PETADMF LR+L+PV+SGCCKPP D
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y NET W+  GG++G N DC  WSNDQ  LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IVVLIILVIFYVI  AA+RN +RIDNDEP GEARMTKS PS    
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score =  378 bits (970), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/277 (73%), Positives = 234/277 (84%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR+ ++LIGL+NFFTFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLI+IG+SIMV+SLAG
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
            AGACY+N  LM  YLF MFF+IAALIGF IFAY VTDKGSGR VM+R Y +Y+L DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRVTD+ YW  I SC+RDS VC K+ R +NG PETA MF  R L+PV+SGCCKPP D
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CG+ Y NET+W PGG +VG NPDC  W+NDQ  LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTK 277
           IVV+IILVIFYVI CAA++N +R+ NDEP GEARMT 
Sbjct: 241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTN 277

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  263 bits (672), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/273 (46%), Positives = 175/273 (64%), Gaps = 8/273 (2%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           +R SN L+G+LNFF FLLS+PI+  GIWLS +A  T C +FL  P+I +GV +M++++AG
Sbjct: 2   VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKAT-TQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
             G+C R T L+  YLFVMFF+I  ++ F IFA+ VT KGSG  +  +AY EY LE YS 
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL+ RV +  +W  I SC+ +SK C  +  V   A  T   F    L   +SGCCKP  D
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVT--ANHTVSDFYKEDLTAFESGCCKPSND 178

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           C F Y   T WN   G    N DC  W N++ +LCY C +CKAG L +LK +W++V+++N
Sbjct: 179 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 237

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEA 273
           I+ L++LV+ Y +GC AFRNN+    ++ YG +
Sbjct: 238 IIFLVLLVVVYAMGCCAFRNNK----EDRYGRS 266

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  261 bits (668), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/271 (47%), Positives = 177/271 (65%), Gaps = 4/271 (1%)

Query: 2   RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
           R SN+L+G+LNF  FLLSIPI+ GGIWLS + + T+C +FL  P+I +GV +MVV++AG 
Sbjct: 3   RCSNNLVGILNFLVFLLSIPILAGGIWLSQKGS-TECERFLDKPVIALGVFLMVVAIAGL 61

Query: 62  AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
            G+C R T L+  YLFVMF +I  +    +FA+ VT+KG+G  +  + Y EY L DYS W
Sbjct: 62  IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 121

Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
           L+ RV +   W KI SC+ +SKVC K+       P   + F    L  +QSGCCKP  +C
Sbjct: 122 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 179

Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
           GF Y N T W        +NPDC  W N +E+LC+ C SCKAG+L ++K +W+KV+++NI
Sbjct: 180 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 239

Query: 242 VVLIILVIFYVIGCAAFRNNRRIDN-DEPYG 271
           V L+ L+I Y +GC AFRNN+R D+    YG
Sbjct: 240 VFLVFLIIVYSVGCCAFRNNKRDDSYSRTYG 270

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score =  256 bits (654), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/260 (49%), Positives = 166/260 (63%), Gaps = 4/260 (1%)

Query: 4   SNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAG 63
           SN+L+G+LNFFTFLLSIPI+  GIWL   A  T+C +FL  P++V+G+ +M VS+AG  G
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAA-TECERFLDKPMVVLGIFLMFVSIAGLVG 63

Query: 64  ACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLK 123
           AC R + L+  YLF MF +I     F IFA+AVT++G+G  + DR Y EYH+ DYS WL+
Sbjct: 64  ACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQ 123

Query: 124 DRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGF 183
            RV +   W +I SC+  S VC   R     A    + F    LN +QSGCCKP  DC F
Sbjct: 124 KRVNNAKNWERIRSCLMYSDVCSTYR--TRYASINVEDFYKSNLNALQSGCCKPSNDCNF 181

Query: 184 VYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINIVV 243
            Y N T W    G    N DC  W N    LCY C++CKAG+L ++K SW+KV+ +NIV 
Sbjct: 182 TYVNPTTWTKTPGPY-KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query: 244 LIILVIFYVIGCAAFRNNRR 263
           LI L+I Y +GC AFRNNR+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1

 Score =  223 bits (568), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/280 (46%), Positives = 166/280 (59%), Gaps = 19/280 (6%)

Query: 2   RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
           R SN +IG+LN  T L SIPIIG  ++ +   ++T C  FLQ PL+VIG  I++VSLAGF
Sbjct: 3   RFSNTVIGVLNLLTLLASIPIIGTALYKAR--SSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 62  AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
            GAC+     +  YL VM F+IA L+G  +F   VT +G G  V  R Y EY L DY  W
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
           L++RV D  YW  I SCI  SK C K+      +  T D F  R +  VQSGCCKPP  C
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIE-----SWTTLDYFQ-RDMTSVQSGCCKPPTAC 174

Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
              YE         G+V    DC RW+N  E LCY+CD+CKAGVL  ++  WRK+SV+NI
Sbjct: 175 --TYE--------AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNI 224

Query: 242 VVLIILVIFYVIGCAAFRNNRRIDND-EPYGEARMTKSRP 280
           +VL++L+  Y  GC AF N R   +   P  + RMT+ RP
Sbjct: 225 LVLVLLIAVYAAGCCAFHNTRHAAHPYHPSDDNRMTRVRP 264

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1

 Score =  217 bits (553), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/273 (43%), Positives = 169/273 (61%), Gaps = 7/273 (2%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           M  +N+L  +LN    L SIPI   GIWL+S+ +N +C+  L+WP++V+GV I+VVS  G
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDN-ECVNLLRWPVVVLGVLILVVSATG 59

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           F GA      L+  YL  M  +I  L+  +IFA+ VT       V  R Y EY LE +S 
Sbjct: 60  FIGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSN 119

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLK+ V D   WG++ +C+ D+ VCPK+ +    A +    FS  K+ P+QSGCCKPP  
Sbjct: 120 WLKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQ---FFSSSKITPLQSGCCKPPTA 176

Query: 181 CGFVYENETLW-NPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVI 239
           CG+ + N TLW NP    + ++ DC  WSNDQ QLCY C+SCKAG+L +L+K WRK ++I
Sbjct: 177 CGYNFVNPTLWLNPTN--MAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLI 234

Query: 240 NIVVLIILVIFYVIGCAAFRNNRRIDNDEPYGE 272
            I+ +++L+  YVI C+AFRN +  D    Y +
Sbjct: 235 LIITVVVLIWVYVIACSAFRNAQTEDLFRKYKQ 267

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1

 Score =  216 bits (550), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/273 (45%), Positives = 167/273 (61%), Gaps = 6/273 (2%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           M  SN++IG +NF T LLSIP+IG GIWL+    N+ C+K LQWP+I++GV I++V LAG
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNS-CVKLLQWPVIILGVLILLVGLAG 59

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           F G  +R T L+  YL  M  +I  L   + F Y VT +GSG P   RAY EY L+D+SG
Sbjct: 60  FIGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSG 119

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL+ RV     W +I +C+  + +CP++    N     A  F    L+P+QSGCCKPP  
Sbjct: 120 WLRRRVQRSYKWERIRTCLSTTTICPEL----NQRYTLAQDFFNAHLDPIQSGCCKPPTK 175

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF + N T W     +  ++ DC  WSNDQ  LCY CDSCKAG+LA++K  W K  +  
Sbjct: 176 CGFTFVNPTYWISPIDM-SADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFL 234

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEA 273
           ++ LI L+I Y+IGC AFRN    D    Y + 
Sbjct: 235 LLALIGLIIVYIIGCCAFRNAETEDIFRKYKQG 267

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1

 Score =  213 bits (543), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 169/284 (59%), Gaps = 18/284 (6%)

Query: 2   RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
           R SN +IG LN  T + SI ++G  +W+    + T C  FLQ PL+++G++I+++S+AG 
Sbjct: 3   RMSNTVIGFLNILTLISSIVLLGSALWMGR--SKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 62  AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
            GAC     ++  YLF M FII AL+G  +F + VT    G  V  R Y E+ LE Y  W
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120

Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
           LK RV D +YW  I +C+  S  C K+      A  T   +  + L+P+QSGCCKPP  C
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKL------ALWTPLDYLQKDLSPLQSGCCKPPTSC 174

Query: 182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVINI 241
             VY  +T       ++  +PDC RW+N    LCY CD+C+AGVL ++++ W K+S++N+
Sbjct: 175 --VYNTDT-------VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNV 225

Query: 242 VVLIILVIFYVIGCAAFRNNRRIDN-DEPYGEARMTKSRPSRIQ 284
           +V+I L+  Y +GC AF+N +R  +   PYG   M+KSRP   Q
Sbjct: 226 IVVIFLIAVYCVGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQ 269

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score =  206 bits (525), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/264 (40%), Positives = 151/264 (57%), Gaps = 6/264 (2%)

Query: 2   RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
           R SN ++GL N    L+    IG  I++      TDC   ++ PL+  G+ + +VSL G 
Sbjct: 3   RVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGV 62

Query: 62  AGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGW 121
            G+C++    M  YL ++F  I AL+ F IF + VT+KG+GR V  R Y EY   D+S W
Sbjct: 63  IGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW 122

Query: 122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
           L   V     W  I SC+ ++ VC  +        + AD F  + L+P+QSGCCKPP+DC
Sbjct: 123 LNGFV-GGKRWVGIRSCLAEANVCDDLSD--GRVSQIADAFYHKNLSPIQSGCCKPPSDC 179

Query: 182 GFVYENETLWNP---GGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSV 238
            F + N T W P       V  N DC  WSN Q +LC+ C++CKAGVLA++++ WR + V
Sbjct: 180 NFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLV 239

Query: 239 INIVVLIILVIFYVIGCAAFRNNR 262
            NI +LI+L+  Y  GC A RNNR
Sbjct: 240 FNICLLILLITVYSCGCCARRNNR 263

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
255570765	284	conserved hypothetical protein [Ricinus	0.996	1.0	0.828	1e-128
449459074	285	PREDICTED: uncharacterized protein LOC10	0.985	0.985	0.779	1e-128
15231187	285	tetraspanin3 [Arabidopsis thaliana] gi|7	1.0	1.0	0.778	1e-127
297819078	285	hypothetical protein ARALYDRAFT_905722 [	1.0	1.0	0.771	1e-127
297793579	285	hypothetical protein ARALYDRAFT_358240 [	0.996	0.996	0.767	1e-126
449463673	285	PREDICTED: uncharacterized protein LOC10	0.996	0.996	0.75	1e-125
356542559	285	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.796	1e-125
359806810	285	uncharacterized protein LOC100788977 [Gl	1.0	1.0	0.8	1e-125
225435207	285	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.775	1e-122
224106724	284	predicted protein [Populus trichocarpa]	0.996	1.0	0.785	1e-122

>gi|255570765|ref|XP_002526335.1| conserved hypothetical protein [Ricinus communis] gi|223534294|gb|EEF36006.1| conserved hypothetical protein [Ricinus communis]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/285 (82%), Positives = 255/285 (89%), Gaps = 1/285 (0%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR+SNHLIGLLNF TFLLSIPI+GGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG
Sbjct: 1   MRSSNHLIGLLNFITFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LM  YLFVMFFIIAALIGFIIFAYAVTDKGSGRPV +RAY +Y+L+DYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVSNRAYLDYYLQDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL++RV  DSYW KISSCIRDSKVC KM   +NG PETADMF  RKLNP+QSGCCKPP+D
Sbjct: 121 WLEERVASDSYWSKISSCIRDSKVCAKMGVTVNGVPETADMFFQRKLNPIQSGCCKPPSD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y NET+W   GG+V  NPDC  WSNDQEQLCY C+SCKAGVL S++KSWRKVSVIN
Sbjct: 181 CGFAYVNETVWTSVGGVV-YNPDCNNWSNDQEQLCYSCNSCKAGVLGSIRKSWRKVSVIN 239

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IV+LIILVI YVIGCAAFRNNRRIDNDEPYGEARMTK++PSRI  
Sbjct: 240 IVILIILVIAYVIGCAAFRNNRRIDNDEPYGEARMTKAQPSRIHL 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459074|ref|XP_004147271.1| PREDICTED: uncharacterized protein LOC101215618 [Cucumis sativus] gi|449501210|ref|XP_004161308.1| PREDICTED: uncharacterized LOC101215618 [Cucumis sativus]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/281 (77%), Positives = 243/281 (86%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGLLNF TFLLS+PIIGGG+WLSSRAN TDCLKFLQWPLI IGV+IM+VSLAG
Sbjct: 1   MRASNHLIGLLNFITFLLSLPIIGGGVWLSSRANTTDCLKFLQWPLISIGVAIMIVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           F GACYRNT LM FYLFVMFF+I AL+GFIIFAYAVT+KGSGRP+ +R Y +Y+L+DYSG
Sbjct: 61  FGGACYRNTFLMWFYLFVMFFVIGALVGFIIFAYAVTEKGSGRPLPNRNYFDYYLQDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL+DRV DD+YWGKISSC+RDS+ C K+ R I+G PET DMF  R L PV+SGCCKPP  
Sbjct: 121 WLRDRVADDTYWGKISSCVRDSQACRKIGRTISGVPETVDMFYRRHLTPVESGCCKPPTV 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CG+VY NET+W+ GGGLVG  PDC RWSNDQ QLCY CDSCKA VLASLKKSWRKVSVIN
Sbjct: 181 CGYVYVNETMWDFGGGLVGGEPDCGRWSNDQRQLCYACDSCKAAVLASLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPS 281
           I+ LIILVI YVIG AAFRNNRRIDNDEP   ARMTKS+PS
Sbjct: 241 IIALIILVISYVIGYAAFRNNRRIDNDEPASTARMTKSKPS 281

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231187|ref|NP_190146.1| tetraspanin3 [Arabidopsis thaliana] gi|75264554|sp|Q9M1E7.1|TET3_ARATH RecName: Full=Tetraspanin-3 gi|14423446|gb|AAK62405.1|AF386960_1 putative protein [Arabidopsis thaliana] gi|6996263|emb|CAB75489.1| putative protein [Arabidopsis thaliana] gi|30023774|gb|AAP13420.1| At3g45600 [Arabidopsis thaliana] gi|332644528|gb|AEE78049.1| tetraspanin3 [Arabidopsis thaliana]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/285 (77%), Positives = 242/285 (84%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGL+NF TFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLIVIG+SIMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRN  LM  YL VM  IIAALIGFIIFAYAVTDKGSGR V++R Y +Y+LEDYSG
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRV+DDSYWGKISSC+RDS  C K+ R  NG PETADMF LR+L+PV+SGCCKPP D
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y NET W+  GG++G N DC  WSNDQ  LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IVVLIILVIFYVI  AA+RN +RIDNDEP GEARMTKS PS    
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPSHFHL 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819078|ref|XP_002877422.1| hypothetical protein ARALYDRAFT_905722 [Arabidopsis lyrata subsp. lyrata] gi|297323260|gb|EFH53681.1| hypothetical protein ARALYDRAFT_905722 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/285 (77%), Positives = 241/285 (84%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGL+NF TFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLIVIG+SIMVVSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRN  LM  YL  M  IIAALIGFIIFAYAVTDKGSGR V++R Y +Y+L+DYSG
Sbjct: 61  FAGACYRNKFLMWLYLVAMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLQDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRV+DDSYWGKISSC+RDS  C K+ R  NG PETADMF LR+L+PV+SGCCKPP D
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y NET W+  GG++G N DC  WSNDQ  LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IVVLIILVIFYVI  AA+RN +RIDNDEP GEARMTKS PS    
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPVGEARMTKSHPSHFHL 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297793579|ref|XP_002864674.1| hypothetical protein ARALYDRAFT_358240 [Arabidopsis lyrata subsp. lyrata] gi|297310509|gb|EFH40933.1| hypothetical protein ARALYDRAFT_358240 [Arabidopsis lyrata subsp. lyrata]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/284 (76%), Positives = 244/284 (85%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR+SN+LIGL+NFFTFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLI+IG+SIMVVSLAG
Sbjct: 1   MRSSNNLIGLVNFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
            AGACY+N  LM  YLF MFF+IAALIGFIIFAYAVTDKGSGR VM+R Y +Y+L DYSG
Sbjct: 61  IAGACYQNKFLMWLYLFAMFFVIAALIGFIIFAYAVTDKGSGRFVMNRRYLDYYLHDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRVTD+ YW +I SC+RDS VC K+RR +NG PET  MF  RKL+PV+SGCCKPP D
Sbjct: 121 WLKDRVTDNGYWNEIGSCVRDSGVCKKIRRDLNGVPETPQMFYFRKLSPVESGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CG+ Y NET+W PGG +VG NPDC  W+NDQ  LCYQC SCKAGVL SLKKSWRKVSVIN
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQ 284
           IVVLIILVIFYVI  AA+RN +RIDNDEP GEARMTKS PS  Q
Sbjct: 241 IVVLIILVIFYVIAYAAYRNIKRIDNDEPVGEARMTKSHPSHFQ 284

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463673|ref|XP_004149556.1| PREDICTED: uncharacterized protein LOC101215313 [Cucumis sativus] gi|449521579|ref|XP_004167807.1| PREDICTED: uncharacterized protein LOC101229032 [Cucumis sativus]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/284 (75%), Positives = 246/284 (86%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGLLNF TF+LSIPI+ GGIWLSS+AN+T+CL+FLQWPLI+IGV+IMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFVLSIPILAGGIWLSSKANSTECLRFLQWPLIIIGVAIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LM  YLFVMFF+I ALI FI+FAYAVTDKGSGR V  R Y +Y+L+DYSG
Sbjct: 61  FAGACYRNTFLMWLYLFVMFFVIVALIVFIVFAYAVTDKGSGRTVPSRVYLDYYLQDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRV ++SYW KISSC+RDSKVC KM R++ G PE+ +MF+LRKL+P++SGCCKPP+D
Sbjct: 121 WLKDRVAEESYWEKISSCVRDSKVCKKMGRIVGGVPESVEMFNLRKLSPIESGCCKPPSD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y+NET+W    G+V  N DCT W+NDQ +LCY CDSCKAGVLASLK+SWRKVSVIN
Sbjct: 181 CGFSYQNETVWTGVEGMVLFNSDCTNWNNDQSELCYNCDSCKAGVLASLKRSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQ 284
           IVVLIILVI YVIG AAFRNNRRIDN+E  GEARM K+RPS I 
Sbjct: 241 IVVLIILVIAYVIGIAAFRNNRRIDNEEASGEARMEKARPSWIH 284

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542559|ref|XP_003539734.1| PREDICTED: uncharacterized protein LOC100798336 [Glycine max]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/285 (79%), Positives = 252/285 (88%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGLLNF TFLLSIPI+GGGIWLSSRANNTDCLKFLQWPLI+IGVSIMVVSLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LMR YL VMF +IA LIGFIIFAY VTDKGSGR VM+RAY EY+LEDYSG
Sbjct: 61  FAGACYRNTFLMRLYLVVMFLVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYYLEDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL++RV  +SYWGKI+SCIRDSKVC +M R +NG P+T DMF L  L P+QSGCCKPP D
Sbjct: 121 WLEERVASESYWGKIASCIRDSKVCGRMGRTVNGMPQTPDMFYLTHLTPIQSGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CG+VY+NET+W PG GL+G+N DCTRWSNDQEQLCY CDSCKAGVLASLKKSWRKVSVIN
Sbjct: 181 CGYVYQNETVWIPGSGLMGTNADCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IVV+IILVI Y+I  AA+RNNR++DNDEPYGEARMTK++PS    
Sbjct: 241 IVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806810|ref|NP_001241564.1| uncharacterized protein LOC100788977 [Glycine max] gi|255645175|gb|ACU23085.1| unknown [Glycine max]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/285 (80%), Positives = 251/285 (88%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGLLNF TFLLSIPI+GGGIWLSSRANNTDCLKFLQWPLI+IGVSIMVVSLAG
Sbjct: 1   MRKSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LMR YL VMF +IA LIGFIIFAY VTDKGSGR VM+RAY EY+LEDYSG
Sbjct: 61  FAGACYRNTFLMRLYLVVMFLVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYYLEDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL++RV  DSYWGKI SC+RDSK C +M   ING PET DMF +R L P+QSGCCKPP D
Sbjct: 121 WLEERVASDSYWGKIVSCVRDSKACGRMGITINGMPETPDMFYIRHLTPIQSGCCKPPTD 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CG+VY+NET+W PG GL+G+NPDCTRWSNDQEQLCY CDSCKAGVLASLKKSWRKVSVIN
Sbjct: 181 CGYVYQNETVWIPGSGLMGANPDCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IVV+IILVI Y+I  AA+RNNR++DNDEPYGEARMTK++PS    
Sbjct: 241 IVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435207|ref|XP_002284871.1| PREDICTED: uncharacterized protein LOC100260311 isoform 1 [Vitis vinifera]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/285 (77%), Positives = 252/285 (88%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR SNHLIGLLNF TFLLSIPI+GGGIWLSSRANNTDC+KFLQWPLI+IGV+IMV+SLAG
Sbjct: 1   MRTSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCMKFLQWPLIIIGVAIMVISLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LM FYL+ MFF+IAAL+GF+IFAYAVTDKGSGR + +R Y +Y+L+DYSG
Sbjct: 61  FAGACYRNTFLMWFYLWAMFFVIAALVGFVIFAYAVTDKGSGRAMPNRVYLDYYLQDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WL++RV+DDSYW KISSC+RDSK C KM R I G PE+AD+F  RKL+P++SGCCKPP +
Sbjct: 121 WLEERVSDDSYWRKISSCVRDSKECAKMGRNIGGVPESADLFYRRKLSPIESGCCKPPTE 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           C +VY NET+W  G G+VGSN DC  WSNDQ QLCY C+SCKAGVLASLKKSWRKVSVIN
Sbjct: 181 CDYVYVNETVWTTGNGMVGSNSDCYSWSNDQGQLCYSCNSCKAGVLASLKKSWRKVSVIN 240

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IV+LIILVI YV+ CAAFRNNRRIDNDE YGE RMTKS+PSRIQF
Sbjct: 241 IVILIILVIVYVVACAAFRNNRRIDNDEAYGETRMTKSQPSRIQF 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106724|ref|XP_002314262.1| predicted protein [Populus trichocarpa] gi|118487628|gb|ABK95639.1| unknown [Populus trichocarpa] gi|222850670|gb|EEE88217.1| predicted protein [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/285 (78%), Positives = 250/285 (87%), Gaps = 1/285 (0%)

Query: 1   MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
           MR+SNHLIG+LNF TFLLSIPI+GGGIWLSSRANNTDCLKFLQWPLI+IG+SIMVVSLAG
Sbjct: 1   MRSSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGISIMVVSLAG 60

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
           FAGACYRNT LM  YLFVMFFIIAAL+GFIIFAY VTDKGSGRP+ +RAYS+Y+L DYSG
Sbjct: 61  FAGACYRNTFLMWAYLFVMFFIIAALLGFIIFAYVVTDKGSGRPLPNRAYSDYYLHDYSG 120

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           WLKDRV  DSYW KI SCIRDSKVC KM R  +G PETAD F  RKL+ ++SGCCKPP +
Sbjct: 121 WLKDRVASDSYWHKIGSCIRDSKVCGKMGRTTSGVPETADTFYSRKLSSIESGCCKPPTE 180

Query: 181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSVIN 240
           CGF Y NET W+  GG+V S  DC  W+NDQE+LCY C+SCKAG+LA+L+KSWRKVSVIN
Sbjct: 181 CGFTYMNETFWSSSGGVVYST-DCNTWNNDQERLCYSCNSCKAGLLANLRKSWRKVSVIN 239

Query: 241 IVVLIILVIFYVIGCAAFRNNRRIDNDEPYGEARMTKSRPSRIQF 285
           IV+LIILVI YV+GCAAFRNNRRIDNDEPYGEARMTKS+PSRI  
Sbjct: 240 IVILIILVIAYVVGCAAFRNNRRIDNDEPYGEARMTKSQPSRIHL 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.985	0.985	0.676	9.8e-103
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.968	0.844	0.630	4.7e-96
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.936	0.978	0.431	1.9e-58
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.898	0.973	0.430	1.8e-55
TAIR|locus:2178570	269	TRN2 "AT5G46700" [Arabidopsis	0.877	0.929	0.437	4.8e-55
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.929	0.974	0.410	9.9e-55
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.901	0.951	0.417	3.8e-53
TAIR|locus:2099272	282	TET6 "AT3G12090" [Arabidopsis	0.915	0.925	0.417	5.8e-50
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.905	0.952	0.356	4.5e-43
TAIR|locus:2038488	284	TET10 "tetraspanin10" [Arabido	0.8	0.802	0.333	2.1e-36

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
 Identities = 190/281 (67%), Positives = 210/281 (74%)

Query:     1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
             MR SNHLIGL+NF TFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLIVIG+SIMVVSLAG
Sbjct:     1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query:    61 FAGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSG 120
             FAGACYRN  LM  YL VM                VTDKGSGR V++R Y +Y+LEDYSG
Sbjct:    61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query:   121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
             WLKDRV+DDSYWGKISSC+RDS  C K+ R  NG PETADMF LR+L+PV+SGCCKPP D
Sbjct:   121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query:   181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXX 240
             CGF Y NET W+  GG++G N DC  WSNDQ  LCYQC SCKAGVL SLKKSWRK     
Sbjct:   181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query:   241 XXXXXXXXXXXXXGCAAFRNNRRIDNDEPYGEARMTKSRPS 281
                            AA+RN +RIDNDEP GEARMTKS PS
Sbjct:   241 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHPS 281

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 174/276 (63%), Positives = 202/276 (73%)

Query:     1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
             MR+ ++LIGL+NFFTFLLSIPI+GGGIWLSSRAN+TDCL+FLQWPLI+IG+SIMV+SLAG
Sbjct:     1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query:    61 FAGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSG 120
              AGACY+N  LM  YLF M                VTDKGSGR VM+R Y +Y+L DYSG
Sbjct:    61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query:   121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
             WLKDRVTD+ YW  I SC+RDS VC K+ R +NG PETA MF  R L+PV+SGCCKPP D
Sbjct:   121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query:   181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXX 240
             CG+ Y NET+W PGG +VG NPDC  W+NDQ  LCYQC SCKAGVL SLKKSWRK     
Sbjct:   181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query:   241 XXXXXXXXXXXXXGCAAFRNNRRIDNDEPYGEARMT 276
                           CAA++N +R+ NDEP GEARMT
Sbjct:   241 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMT 276

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 117/271 (43%), Positives = 155/271 (57%)

Query:     2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
             R SN+L+G+LNF  FLLSIPI+ GGIWLS + + T+C +FL  P+I +GV +MVV++AG 
Sbjct:     3 RCSNNLVGILNFLVFLLSIPILAGGIWLSQKGS-TECERFLDKPVIALGVFLMVVAIAGL 61

Query:    62 AGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSGW 121
              G+C R T L+  YLFVM                VT+KG+G  +  + Y EY L DYS W
Sbjct:    62 IGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTW 121

Query:   122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
             L+ RV +   W KI SC+ +SKVC K+       P   + F    L  +QSGCCKP  +C
Sbjct:   122 LQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVP--VNSFYKEHLTALQSGCCKPSDEC 179

Query:   182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXXX 241
             GF Y N T W        +NPDC  W N +E+LC+ C SCKAG+L ++K +W+K      
Sbjct:   180 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 239

Query:   242 XXXXXXXXXXXXGCAAFRNNRRIDN-DEPYG 271
                         GC AFRNN+R D+    YG
Sbjct:   240 VFLVFLIIVYSVGCCAFRNNKRDDSYSRTYG 270

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 112/260 (43%), Positives = 144/260 (55%)

Query:     4 SNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAG 63
             SN+L+G+LNFFTFLLSIPI+  GIWL   A  T+C +FL  P++V+G+ +M VS+AG  G
Sbjct:     5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAA-TECERFLDKPMVVLGIFLMFVSIAGLVG 63

Query:    64 ACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSGWLK 123
             AC R + L+  YLF M                VT++G+G  + DR Y EYH+ DYS WL+
Sbjct:    64 ACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQ 123

Query:   124 DRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGF 183
              RV +   W +I SC+  S VC   R     A    + F    LN +QSGCCKP  DC F
Sbjct:   124 KRVNNAKNWERIRSCLMYSDVCSTYRT--RYASINVEDFYKSNLNALQSGCCKPSNDCNF 181

Query:   184 VYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXXXXX 243
              Y N T W    G    N DC  W N    LCY C++CKAG+L ++K SW+K        
Sbjct:   182 TYVNPTTWTKTPGPY-KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query:   244 XXXXXXXXXXGCAAFRNNRR 263
                       GC AFRNNR+
Sbjct:   241 LIFLIIVYSVGCCAFRNNRK 260

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2178570 TRN2 "AT5G46700" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 113/258 (43%), Positives = 150/258 (58%)

Query:     4 SNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAG 63
             SN++IG +NF T LLSIP+IG GIWL+    N+ C+K LQWP+I++GV I++V LAGF G
Sbjct:     4 SNNVIGCINFITVLLSIPVIGAGIWLAIGTVNS-CVKLLQWPVIILGVLILLVGLAGFIG 62

Query:    64 ACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSGWLK 123
               +R T L+  YL  M                VT +GSG P   RAY EY L+D+SGWL+
Sbjct:    63 GFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLR 122

Query:   124 DRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGF 183
              RV     W +I +C+  + +CP++ +    A    D F+   L+P+QSGCCKPP  CGF
Sbjct:   123 RRVQRSYKWERIRTCLSTTTICPELNQRYTLAQ---DFFNAH-LDPIQSGCCKPPTKCGF 178

Query:   184 VYENETLW-NPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXXXX 242
              + N T W +P    + ++ DC  WSNDQ  LCY CDSCKAG+LA++K  W K       
Sbjct:   179 TFVNPTYWISPID--MSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLL 236

Query:   243 XXXXXXXXXXXGCAAFRN 260
                        GC AFRN
Sbjct:   237 ALIGLIIVYIIGCCAFRN 254

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0010015 "root morphogenesis" evidence=RCA;IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 112/273 (41%), Positives = 149/273 (54%)

Query:     1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
             +R SN L+G+LNFF FLLS+PI+  GIWLS +A  T C +FL  P+I +GV +M++++AG
Sbjct:     2 VRFSNSLVGILNFFVFLLSVPILSTGIWLSLKAT-TQCERFLDKPMIALGVFLMIIAIAG 60

Query:    61 FAGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSG 120
               G+C R T L+  YLFVM                VT KGSG  +  +AY EY LE YS 
Sbjct:    61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query:   121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
             WL+ RV +  +W  I SC+ +SK C  +  V   A  T   F    L   +SGCCKP  D
Sbjct:   121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVT--ANHTVSDFYKEDLTAFESGCCKPSND 178

Query:   181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXX 240
             C F Y   T WN   G    N DC  W N++ +LCY C +CKAG L +LK +W++     
Sbjct:   179 CDFTYITSTTWNKTSG-THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVN 237

Query:   241 XXXXXXXXXXXXXGCAAFRNNRRIDNDEPYGEA 273
                          GC AFRNN+    ++ YG +
Sbjct:   238 IIFLVLLVVVYAMGCCAFRNNK----EDRYGRS 266

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 112/268 (41%), Positives = 149/268 (55%)

Query:     1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
             M  +N+L  +LN    L SIPI   GIWL+S+ +N +C+  L+WP++V+GV I+VVS  G
Sbjct:     1 MALANNLTAILNLLALLCSIPITASGIWLASKPDN-ECVNLLRWPVVVLGVLILVVSATG 59

Query:    61 FAGAC-YRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYS 119
             F GA  Y+ T L+  YL  M                VT       V  R Y EY LE +S
Sbjct:    60 FIGAYKYKET-LLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFS 118

Query:   120 GWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMF-SLRKLNPVQSGCCKPP 178
              WLK+ V D   WG++ +C+ D+ VCPK+ +       TAD F S  K+ P+QSGCCKPP
Sbjct:   119 NWLKENVVDSKNWGRLRACLADTNVCPKLNQEFI----TADQFFSSSKITPLQSGCCKPP 174

Query:   179 ADCGFVYENETLW-NPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXX 237
               CG+ + N TLW NP    + ++ DC  WSNDQ QLCY C+SCKAG+L +L+K WRK  
Sbjct:   175 TACGYNFVNPTLWLNPTN--MAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKAN 232

Query:   238 XXXXXXXXXXXXXXXXGCAAFRNNRRID 265
                              C+AFRN +  D
Sbjct:   233 LILIITVVVLIWVYVIACSAFRNAQTED 260

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2099272 TET6 "AT3G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 117/280 (41%), Positives = 144/280 (51%)

Query:     2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
             R SN +IG+LN  T L SIPIIG  ++  +R++ T C  FLQ PL+VIG  I++VSLAGF
Sbjct:     3 RFSNTVIGVLNLLTLLASIPIIGTALY-KARSSTT-CENFLQTPLLVIGFIILIVSLAGF 60

Query:    62 AGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSGW 121
              GAC+     +  YL VM                VT +G G  V  R Y EY L DY  W
Sbjct:    61 IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query:   122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
             L++RV D  YW  I SCI  SK C K+      +  T D F  R +  VQSGCCKPP  C
Sbjct:   121 LRERVRDPEYWNSIRSCILSSKTCTKIE-----SWTTLDYFQ-RDMTSVQSGCCKPPTAC 174

Query:   182 GFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXXXXX 241
                YE         G+V    DC RW+N  E LCY+CD+CKAGVL  ++  WRK      
Sbjct:   175 --TYE--------AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNI 224

Query:   242 XXXXXXXXXXXXGCAAFRNNRRIDND-EPYGEARMTKSRP 280
                         GC AF N R   +   P  + RMT+ RP
Sbjct:   225 LVLVLLIAVYAAGCCAFHNTRHAAHPYHPSDDNRMTRVRP 264

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 94/264 (35%), Positives = 131/264 (49%)

Query:     2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGF 61
             R SN ++GL N    L+    IG  I++      TDC   ++ PL+  G+ + +VSL G 
Sbjct:     3 RVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGV 62

Query:    62 AGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSGW 121
              G+C++    M  YL ++                VT+KG+GR V  R Y EY   D+S W
Sbjct:    63 IGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW 122

Query:   122 LKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADC 181
             L   V     W  I SC+ ++ VC  +        + AD F  + L+P+QSGCCKPP+DC
Sbjct:   123 LNGFV-GGKRWVGIRSCLAEANVCDDLSD--GRVSQIADAFYHKNLSPIQSGCCKPPSDC 179

Query:   182 GFVYENETLWNPGGG---LVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKXXX 238
              F + N T W P       V  N DC  WSN Q +LC+ C++CKAGVLA++++ WR    
Sbjct:   180 NFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLV 239

Query:   239 XXXXXXXXXXXXXXXGCAAFRNNR 262
                            GC A RNNR
Sbjct:   240 FNICLLILLITVYSCGCCARRNNR 263

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2038488 TET10 "tetraspanin10" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/234 (33%), Positives = 123/234 (52%)

Query:     1 MRNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAG 60
             M  S  +I  +N  T LL++ +I  G+W+S+  +N  C + L +P+I +G  I ++S+ G
Sbjct:     3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMST--HNDGCRRSLTFPVIALGGFIFLISIIG 60

Query:    61 FAGACYRNTHLMRFYLFVMXXXXXXXXXXXXXXXXVTDKGSGRPVMDRAYSEYHLEDYSG 120
             F GAC R+  L+  YL V+                VT+ GSG       Y EY L DYS 
Sbjct:    61 FLGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSS 120

Query:   121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
             W   ++ + S W ++ SC+  S+ C K+ +      +T       +L P+++GCC+PP++
Sbjct:   121 WFLKQLNNTSNWIRLKSCLVKSEQCRKLSKKY----KTIKQLKSAELTPIEAGCCRPPSE 176

Query:   181 CGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWR 234
             CG+   N + ++     + SN DC  + N +   CY CDSCKAGV   +K  WR
Sbjct:   177 CGYPAVNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWR 230

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M1E7	TET3_ARATH	No assigned EC number	0.7789	1.0	1.0	yes	no
Q9LSS4	TET4_ARATH	No assigned EC number	0.7364	0.9719	0.8470	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	1e-28

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score =  108 bits (272), Expect = 1e-28
 Identities = 51/262 (19%), Positives = 91/262 (34%), Gaps = 54/262 (20%)

Query: 7   LIGLLNFFTFLLSIPIIGGGIWLSSRANN------TDCLKFLQWPLIVIGVSIMVVSLAG 60
           L+ LLN    LL + ++  GIWL   A +       D ++ L   +IV+GV I++V   G
Sbjct: 5   LLFLLNLLFLLLGLALLAVGIWLLVIAKDYLAIALNDSIRALYILIIVLGVIILLVGFLG 64

Query: 61  FAGACYRNTHLMRFYLFVMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSG 120
             GA   +  L+  Y  ++  +    I   I A+   DK               L++   
Sbjct: 65  CCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYRDKLESS-----------LKEGLN 113

Query: 121 WLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPAD 180
           +      DD    +    ++ S  C                                   
Sbjct: 114 YKDKSYNDDPNLTEAIDELQKSLEC----------------------------------- 138

Query: 181 CGFV--YENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRKVSV 238
           CG     +              + DC  W+ND   L    + CK  +L  LKK+ + +  
Sbjct: 139 CGVNSYTDWLDSQYFSPSSSNPDSDCCCWNNDTSNLNIYTEGCKEKLLEFLKKNLKIIGG 198

Query: 239 INIVVLIILVIFYVIGCAAFRN 260
           + + + +I ++  ++ C   R+
Sbjct: 199 VGLGIAVIQLLGIILACCLCRS 220

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
KOG3882	237	consensus Tetraspanin family integral membrane pro	100.0
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.92
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	99.39
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	99.37
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	99.37
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	99.36
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	99.35
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	99.33
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	99.32
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	99.3
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	99.28
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	99.27
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	99.27
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	99.26
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	99.19
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	99.18
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	99.11
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	98.97
cd03151	84	CD81_like_LEL Tetraspanin, extracellular domain or	98.46
PF05640	200	NKAIN: Na,K-Atpase Interacting protein; InterPro:	90.73
PRK12585	197	putative monovalent cation/H+ antiporter subunit G	86.78
PF11297	69	DUF3098: Protein of unknown function (DUF3098); In	86.73
PF10724	100	DUF2516: Protein of unknown function (DUF2516); In	86.19
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	84.98
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	83.69
PF03729	72	DUF308: Short repeat of unknown function (DUF308);	83.4
PF04103	150	CD20: CD20-like family; InterPro: IPR007237 This f	82.69
PF05915	115	DUF872: Eukaryotic protein of unknown function (DU	81.53
KOG4433	526	consensus Tweety transmembrane/cell surface protei	81.53

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=100.00  E-value=1.1e-39  Score=286.99  Aligned_cols=221  Identities=18%  Similarity=0.291  Sum_probs=176.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhhcccCcchhhh---hhhhh--HHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q 023208            2 RNSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLK---FLQWP--LIVIGVSIMVVSLAGFAGACYRNTHLMRFYL   76 (285)
Q Consensus         2 ~~~K~~L~~~N~lf~i~Gi~ll~~Gi~~~~~~~~~~~~~---~~~~~--li~~G~~i~iis~lGc~Ga~~es~~lL~~Y~   76 (285)
                      +++||+++++|+++|++|++++++|+|++.++.......   ++..+  ++++|++++++|++||+||.|||+|+|.+|+
T Consensus         7 ~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y~   86 (237)
T KOG3882|consen    7 SCLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSYF   86 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHHH
Confidence            689999999999999999999999999999987542110   22233  9999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhheeccCCCCccc-c--ccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCC
Q 023208           77 FVMFFIIAALIGFIIFAYAVTDKGSGRPV-M--DRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVIN  153 (285)
Q Consensus        77 ~ll~vl~i~ei~~~i~~~~~~~~~~~~~~-~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~  153 (285)
                      +++++++++|++++++++++++++++... .  ++.++.|..++         +.+++||.+|+    +++|||++|   
T Consensus        87 ~~l~l~~i~e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~---------~~~~~~d~~Q~----~~~CCG~~~---  150 (237)
T KOG3882|consen   87 ILLLLLFIAELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDP---------DLGEAWDKLQR----ELKCCGVNG---  150 (237)
T ss_pred             HHHHHHHHHHHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCc---------cHHHHHHHHHH----hccCCcCCC---
Confidence            99999999999999999999998866553 1  33333343322         22378999999    999999999   


Q ss_pred             CCCCchhhhhhcCCCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          154 GAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       154 ~~~~~~~dw~~~~~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                        |.   ||...+...||+|||++....      .             .......+.|.      +||.+++.+++++++
T Consensus       151 --~~---~~~~~~~~~vP~SCC~~~~~~------~-------------~~~~~~~~~~~------~GC~~~~~~~~~~~~  200 (237)
T KOG3882|consen  151 --YS---DYFNCSSNNVPPSCCKRTRRQ------K-------------FPQDVPDNIYT------EGCLEKLSSWLESNL  200 (237)
T ss_pred             --ch---HHhcCCCCCCCcccCCCcccc------c-------------ccccchhhhhc------cccHHHHHHHHHHhh
Confidence              75   888764322999999872100      0             00001123455      577799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCC
Q 023208          234 RKVSVINIVVLIILVIFYVIGCAAFRNNRRIDNDE  268 (285)
Q Consensus       234 ~~v~~~~~~i~~iqii~~~~a~~l~~~~~~~~~~~  268 (285)
                      ..+++++++++++|++++++|+++.+++|+.++..
T Consensus       201 ~~i~~~~~~i~~~~~~~~~~a~~l~~~i~~~~~~~  235 (237)
T KOG3882|consen  201 LIIGGVGLGIAVLELLGMILACCLANAIRNQRDRR  235 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999998876543

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.92  E-value=2e-27  Score=203.50  Aligned_cols=214  Identities=20%  Similarity=0.386  Sum_probs=41.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhcccCcchh--hhh---hhhhHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Q 023208            3 NSNHLIGLLNFFTFLLSIPIIGGGIWLSSRANNTDC--LKF---LQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLF   77 (285)
Q Consensus         3 ~~K~~L~~~N~lf~i~Gi~ll~~Gi~~~~~~~~~~~--~~~---~~~~li~~G~~i~iis~lGc~Ga~~es~~lL~~Y~~   77 (285)
                      ++|++++++|++++++|++++++|+|++......+.  ...   ....++++|+++++++++|++|+.++||+++.+|.+
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~   80 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYII   80 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Confidence            589999999999999999999999999422221111  111   112277799999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhheeccCCCCccccccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCCCCCC
Q 023208           78 VMFFIIAALIGFIIFAYAVTDKGSGRPVMDRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPE  157 (285)
Q Consensus        78 ll~vl~i~ei~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~  157 (285)
                      +++++++++++++++++.++++......  +.+..+....+    .+++..++.||.+|+    +++|||.++     ++
T Consensus        81 ~~~~~~v~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~iq~----~~~CCG~~~-----~~  145 (221)
T PF00335_consen   81 LLILLFVLELVVGIVAFSYRDQLNSSLK--DGLSLRCMKSY----NSNESFSEAWDNIQE----KFECCGVNS-----PD  145 (221)
T ss_dssp             -------------------HHHHHHHHH--HHHHHHHHHSS----TT-CHHHHHHHHHHH----HHT--SSTT-----CH
T ss_pred             chhhHHHHHHHHHHhhhhcccccccccc--ccccchhhhcc----ccccchhhheecccc----cccccCCCC-----Cc
Confidence            9999999999999999999887643321  11100000011    112256889999999    999999999     76


Q ss_pred             chhhhhhcCC--CCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHhhHH
Q 023208          158 TADMFSLRKL--NPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSWRK  235 (285)
Q Consensus       158 ~~~dw~~~~~--~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~~~  235 (285)
                         ||.....  .+.|+.|.....                     ..+++..+..+      .+||.+++.++++++...
T Consensus       146 ---d~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~------~~gC~~~l~~~~~~~~~~  195 (221)
T PF00335_consen  146 ---DWFTSKWSSCSSPDSCPDCQC---------------------PDDCSSENSIY------TRGCYDKLREYLRSYLKY  195 (221)
T ss_dssp             ---HHHHHHHHT---------TCS----------------------TTCCCCHCCT------ST-HHHHHHHHHCT----
T ss_pred             ---ccccccccccccccccccccc---------------------ccccccccccc------CCChHHHHHHHHHHHHHH
Confidence               7754321  111111100000                     00111111223      368889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023208          236 VSVINIVVLIILVIFYVIGCAAFRNN  261 (285)
Q Consensus       236 v~~~~~~i~~iqii~~~~a~~l~~~~  261 (285)
                      +++++++++++|++++++|+++.|++
T Consensus       196 ~~~~~~~~~~l~~~~~~~a~~l~~~~  221 (221)
T PF00335_consen  196 IGIVSLAILVLQLIGIILACCLCRHI  221 (221)
T ss_dssp             --------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999988874

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=99.39  E-value=7.3e-14  Score=107.37  Aligned_cols=94  Identities=15%  Similarity=0.270  Sum_probs=58.9

Q ss_pred             heeccCCCCcccc--ccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC-----
Q 023208           94 YAVTDKGSGRPVM--DRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK-----  166 (285)
Q Consensus        94 ~~~~~~~~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~-----  166 (285)
                      +++++++...+..  .+.+++|..++         ..+.+||.+|+    +|+|||+++     |+   ||....     
T Consensus         2 ~v~~~~v~~~~~~~~~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~   60 (105)
T cd03163           2 YVYRAKVEDELNPSIDKVFNKYNGTN---------AESRAVDYLQR----QLQCCGIHN-----YT---DWENTPWFKES   60 (105)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHH----hCcccCCCC-----HH---HHhhchhhhcC
Confidence            5666666444321  33444443221         35789999999    999999999     76   885421     


Q ss_pred             -CCCCCCCCCCCC-CCCCcccccCcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          167 -LNPVQSGCCKPP-ADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       167 -~~~vP~SCC~~~-~~C~~~~~~~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                       ...||.|||... ..|+....                   ....+|.      +||.+++.+++++++
T Consensus        61 ~~~~vP~SCC~~~~~~C~~~~~-------------------~~~~i~~------~GC~~~~~~~~~~~~  104 (105)
T cd03163          61 KNNSVPLSCCKETFTSCTGSLT-------------------QPKDLYQ------EGCEAKLVKKLQEVM  104 (105)
T ss_pred             CCCccCcCccCCCCCCcccCCC-------------------CCCchhh------hccHHHHHHHHHHHh
Confidence             246999999643 23532100                   0013455      467799999999886

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=99.37  E-value=1.6e-13  Score=105.09  Aligned_cols=75  Identities=11%  Similarity=0.133  Sum_probs=50.4

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC---CCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCc
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK---LNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPD  203 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~---~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~  203 (285)
                      ..+.+||.+|+    +|+|||+++     |+   ||....   ...||.|||.....|+......            .  
T Consensus        27 ~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~vP~SCC~~~~~C~~~~~~~------------~--   80 (104)
T cd03161          27 ERSDAVDTVQR----TLHCCGVEN-----YT---DWLNSPYFLEKGIPLSCCKNRSDCSPQDLKN------------L--   80 (104)
T ss_pred             hHHHHHHHHHh----cCcCcCCCC-----hh---hhhccccccCCCcCcccccCCCCCCcccccc------------c--
Confidence            35679999999    999999999     77   886431   1469999997655565321100            0  


Q ss_pred             cccccCccccccccCcchHHHHHHHHHHhh
Q 023208          204 CTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       204 c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                      .....++|.      +||.+++.+++++++
T Consensus        81 ~~~~~~i~~------~GC~~~~~~~~~~n~  104 (104)
T cd03161          81 TKAATKVYQ------QGCFTLVTSFMEANM  104 (104)
T ss_pred             cccccccch------hccHHHHHHHHHHhC
Confidence            000123555      466799999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=99.37  E-value=1.1e-13  Score=105.35  Aligned_cols=97  Identities=14%  Similarity=0.016  Sum_probs=62.3

Q ss_pred             HHhhheeccCCCCcccc--ccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCC
Q 023208           90 IIFAYAVTDKGSGRPVM--DRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKL  167 (285)
Q Consensus        90 ~i~~~~~~~~~~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~  167 (285)
                      ||++|++++++...+..  .+.+++|..++        ...+.+||.+|+    +|+|||+++     +.   ||+.   
T Consensus         1 gi~~~v~r~~i~~~i~~~~~~~i~~y~~~~--------~~~~~~~d~lQ~----~l~CCG~~~-----~~---d~~~---   57 (100)
T cd03154           1 GIVGAVYKPKIENELKEKNTKLLSLLGQNA--------KSVKKSLEKFQK----ELKCCGLVN-----GA---DDWG---   57 (100)
T ss_pred             CEEEEEeHHHHHHHHHHHHHHHHHHcCCCh--------HHHHHHHHHHHH----cCCCCCCCC-----ch---hhcc---
Confidence            46789999988655421  44555553221        135789999999    999999999     65   7764   


Q ss_pred             CCCCCCCCCC-CCCCCcccccCcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          168 NPVQSGCCKP-PADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       168 ~~vP~SCC~~-~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                      ..||+|||+. ...|...                 ..+ ....+|+      +||.+++.+|+++++
T Consensus        58 ~~vP~SCcc~~~~~c~~~-----------------~~~-~~~~~~~------~GC~~~i~~~~~~~~  100 (100)
T cd03154          58 NDIPASCNCTTTQSDCVV-----------------AYY-GGSNVYK------EPCISKIKDFLKKNL  100 (100)
T ss_pred             CCCCCCCcCCCCCCCccc-----------------ccC-CCcCccc------cccHHHHHHHHHhhC
Confidence            3699999643 3333210                 000 0123455      466699999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=99.36  E-value=1.4e-13  Score=107.81  Aligned_cols=102  Identities=15%  Similarity=0.162  Sum_probs=61.2

Q ss_pred             heeccCCCCcccc--ccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC-----
Q 023208           94 YAVTDKGSGRPVM--DRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK-----  166 (285)
Q Consensus        94 ~~~~~~~~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~-----  166 (285)
                      +++++++...+..  .+.+++|+..+.      +...+.+||.+|+    +|+|||+++     |+   ||....     
T Consensus         2 ~v~r~~v~~~i~~~l~~~i~~y~~~~~------~~~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~   63 (117)
T cd03160           2 YFQRDKLKQEMGDIVEKVIQNYGGNPE------NKTAEEAWDYVQF----QLQCCGWTG-----PQ---DWTDNSLIKNS   63 (117)
T ss_pred             ceeHHHHHHHHHHHHHHHHHhcCCCCC------CchHHHHHHHHHh----hCcccCCCC-----ch---hHHhchhccCC
Confidence            5667766544321  344555543211      1246789999999    999999999     77   775321     


Q ss_pred             -CCCCCCCCCCCCCC-CCcccccCcccCCCCCCCCCCCccccc----cCccccccccCcchHHHHHHHHHHhh
Q 023208          167 -LNPVQSGCCKPPAD-CGFVYENETLWNPGGGLVGSNPDCTRW----SNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       167 -~~~vP~SCC~~~~~-C~~~~~~~t~~~~~~~~~~~~~~c~~~----~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                       ...||.|||..... ++..              .....|...    ..+|+      +||.+++.+|+++++
T Consensus        64 ~~~~vP~SCC~~~~~~~~~~--------------~~~~~C~~~~~~~~~iy~------~GC~~~l~~~~~~n~  116 (117)
T cd03160          64 SEPLYPCSCCNSSATADSPR--------------PSKGFCEAPASLDWPVYQ------EGCMEKLQSWLNENL  116 (117)
T ss_pred             CCCCCCHhhhcCCccccccC--------------CCCcccCCCCccccchHH------HhhHHHHHHHHHHhc
Confidence             13699999975321 1100              011234211    12444      577799999999986

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=99.35  E-value=1.5e-13  Score=101.84  Aligned_cols=59  Identities=15%  Similarity=0.348  Sum_probs=47.3

Q ss_pred             chhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCCCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCccccc
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRW  207 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~  207 (285)
                      .+.+||.+|+    .|+|||+++     |+   ||.    ..+|+|||...  |                          
T Consensus        28 ~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~----~~vP~SCC~~~--~--------------------------   63 (86)
T cd03164          28 TSEAWDMIQS----NLQCCGING-----TT---DWG----SGVPSSCCSSD--T--------------------------   63 (86)
T ss_pred             HHHHHHHHHH----HhcCCCCCC-----hh---hhC----CCCChhhcCCC--C--------------------------
Confidence            4789999999    999999999     87   995    36999999631  1                          


Q ss_pred             cCccccccccCcchHHHHHHHHHHhhHHHH
Q 023208          208 SNDQEQLCYQCDSCKAGVLASLKKSWRKVS  237 (285)
Q Consensus       208 ~~~~~~gC~~~~GC~~~l~~~l~~~~~~v~  237 (285)
                       ++|.      +||.+++.+++++++.+++
T Consensus        64 -~~~~------~GC~~~~~~~~~~~~~iig   86 (86)
T cd03164          64 -EYKV------EGCYKKLKNWFESNFLYTG   86 (86)
T ss_pred             -cccc------ccHHHHHHHHHHHHHHHhC
Confidence             2344      4777999999999998764

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=99.33  E-value=2.8e-13  Score=106.93  Aligned_cols=76  Identities=14%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC------------CCCCCCCCCCCC-------CCCCccccc
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK------------LNPVQSGCCKPP-------ADCGFVYEN  187 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~------------~~~vP~SCC~~~-------~~C~~~~~~  187 (285)
                      ..+.+||.+|+    +|+|||++|     |+   ||....            ...||.|||...       ..|+.....
T Consensus        27 ~~~~~~D~iQ~----~l~CCG~~~-----~~---DW~~~~~~~~~~~~~~~~~~~vP~SCC~~~~~~~~~~~~C~~~~~~   94 (121)
T cd03159          27 DLQNLIDFLQE----YWQCCGARG-----PD---DWNLNIYFNCTDSNPSRERCGVPFSCCVKDPAEDVVNTQCGYDVRK   94 (121)
T ss_pred             HHHHHHHHHHH----hccCCCCCC-----hH---HhcccccccccCCCCCCCCCCCCcccccCCcccccccCccCccccc
Confidence            35789999999    999999999     76   775321            125999999732       235321100


Q ss_pred             CcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          188 ETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       188 ~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                      .     +        ......++|.      +||.+++.+|+++++
T Consensus        95 ~-----~--------~~~~~~~i~~------~GC~~~l~~~~~~n~  121 (121)
T cd03159          95 K-----P--------ELELQHHIHT------KGCVQAFEKWLQDNL  121 (121)
T ss_pred             c-----c--------cccccCCchH------hhCHHHHHHHHHhcC
Confidence            0     0        0001123555      467799999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=99.32  E-value=3.1e-13  Score=102.73  Aligned_cols=69  Identities=14%  Similarity=0.232  Sum_probs=48.3

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC---CCCCCCCCCCCC-CCCCcccccCcccCCCCCCCCCCC
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK---LNPVQSGCCKPP-ADCGFVYENETLWNPGGGLVGSNP  202 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~---~~~vP~SCC~~~-~~C~~~~~~~t~~~~~~~~~~~~~  202 (285)
                      ..+.+||.+|+    +|+|||+++     |+   ||....   ...||.|||... ..|+...                 
T Consensus        27 ~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~vP~SCC~~~~~~C~~~~-----------------   77 (99)
T cd03166          27 DFRKILDRMQK----DLKCCGANN-----YT---DWENIPSLDTDSVPDSCCINVTKGCGINF-----------------   77 (99)
T ss_pred             HHHHHHHHHHH----HhcccCCCC-----hh---hhhcccCCCCCCCCcCccCcCCCCcccCC-----------------
Confidence            35789999999    999999999     87   886431   246999999642 2343210                 


Q ss_pred             ccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          203 DCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       203 ~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                         ....+|.      +||.+++.+|+++++
T Consensus        78 ---~~~~~y~------~GC~~~~~~~~~~~~   99 (99)
T cd03166          78 ---DEKVIHL------EGCVTKIEGWLKKNI   99 (99)
T ss_pred             ---CccchHH------hcCHHHHHHHHHHhC
Confidence               0113455      466799999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=99.30  E-value=6.4e-13  Score=102.90  Aligned_cols=72  Identities=15%  Similarity=0.138  Sum_probs=47.8

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC--------CCCCCCCCCCCCC-CCCcccccCcccCCCCCC
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK--------LNPVQSGCCKPPA-DCGFVYENETLWNPGGGL  197 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~--------~~~vP~SCC~~~~-~C~~~~~~~t~~~~~~~~  197 (285)
                      ..+.+||.+|+    +|+|||+++     |+   ||....        ...||.|||.... .|+...            
T Consensus        30 ~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~~~~~~vP~SCC~~~~~~c~~~~------------   85 (110)
T cd03155          30 ALTLTVDELQQ----EFKCCGSNN-----YT---DWQDSEWINSNEANGRLVPDSCCKTVVDRCGCLR------------   85 (110)
T ss_pred             HHHHHHHHHHH----hCcCcCCCC-----hh---hhhhccccccCCCCCCCCCccccCCCCCCccccc------------
Confidence            46789999999    999999999     76   886431        1469999997532 332100            


Q ss_pred             CCCCCccccccCccccccccCcchHHHHHHHHHHhh
Q 023208          198 VGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       198 ~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                             ....++|.    +.+||.+++.+|+++++
T Consensus        86 -------~~~~~~~~----~~~GC~~~~~~~~~~~~  110 (110)
T cd03155          86 -------DHPSNIYK----VEGGCIPKLEDFLYDHL  110 (110)
T ss_pred             -------CChhcccc----ccCChHHHHHHHHHHhC
Confidence                   00012343    01467799999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=99.28  E-value=7.9e-13  Score=104.04  Aligned_cols=40  Identities=13%  Similarity=0.071  Sum_probs=31.0

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC----------CCCCCCCCCCCC
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK----------LNPVQSGCCKPP  178 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~----------~~~vP~SCC~~~  178 (285)
                      ..+.+||.+|.    +|+|||+++     |+   ||....          ...||.|||...
T Consensus        27 ~~~~~~d~lQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~~~~~~~~vP~SCC~~~   76 (119)
T cd03158          27 DLQNIIDFVQK----EFKCCGGDD-----YR---DWSKNMYFNCSSPNPEACGVPYSCCIRA   76 (119)
T ss_pred             HHHHHHHHHHH----HccCCCCCC-----hh---hcccccccccCCCCCcCCCcCcCcccCC
Confidence            46789999999    999999999     76   775311          135999999753

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=99.27  E-value=7.5e-13  Score=100.31  Aligned_cols=68  Identities=18%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC-CCCCCCCCCCCC-CCCCcccccCcccCCCCCCCCCCCcc
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK-LNPVQSGCCKPP-ADCGFVYENETLWNPGGGLVGSNPDC  204 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~-~~~vP~SCC~~~-~~C~~~~~~~t~~~~~~~~~~~~~~c  204 (285)
                      ..+.+||.+|+    +|+|||+++     |+   ||.... ...||.|||... ..|+..                    
T Consensus        29 ~~~~~~d~~Q~----~l~CCG~~~-----~~---Dw~~~~~~~~vP~SCC~~~~~~C~~~--------------------   76 (98)
T cd03165          29 GLTNAWDITQT----EFRCCGVTN-----YT---DWYEVLGENRVPDSCCQEDSQDCGRN--------------------   76 (98)
T ss_pred             HHHHHHHHHHH----hCcCcCCCC-----hh---HHHHhcCCCCCCHhhcCCCccccccC--------------------
Confidence            35789999999    999999999     87   886531 246999999642 234211                    


Q ss_pred             ccccCccccccccCcchHHHHHHHHHHhh
Q 023208          205 TRWSNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       205 ~~~~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                       ....+|.      +||.+++.+|+++++
T Consensus        77 -~~~~~~~------~GC~~~~~~~~~~~~   98 (98)
T cd03165          77 -PTELWWK------TGCYEKVQQWLVDNL   98 (98)
T ss_pred             -CccchHH------hhhHHHHHHHHHhcC
Confidence             0012444      577799999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=99.27  E-value=1.2e-12  Score=103.17  Aligned_cols=40  Identities=10%  Similarity=0.179  Sum_probs=30.7

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC----------CCCCCCCCCCCC
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK----------LNPVQSGCCKPP  178 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~----------~~~vP~SCC~~~  178 (285)
                      ..+.+||.+|+    +|+|||+++     |+   ||....          ...||.|||...
T Consensus        27 ~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~~~~~~~~vP~SCC~~~   76 (120)
T cd03167          27 DLRFLIDQVQL----GLQCCGASS-----YQ---DWQQNLYFNCSSPGVQACSLPASCCIDP   76 (120)
T ss_pred             hHHHHHHHHHH----hccCCCCCC-----hH---HhcccccccCCCCCCCCCCCCcCccCCC
Confidence            34679999999    999999999     76   775321          126999999643

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=99.26  E-value=6.7e-13  Score=103.13  Aligned_cols=40  Identities=23%  Similarity=0.449  Sum_probs=32.3

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhc---------CCCCCCCCCCCCC
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLR---------KLNPVQSGCCKPP  178 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~---------~~~~vP~SCC~~~  178 (285)
                      ..+.+||.+|+    +|+|||++|     |+   ||...         ....||.|||...
T Consensus        30 ~~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~~~~~~~~~~~~~~~vP~SCC~~~   78 (114)
T cd03156          30 AITSTWNRVMI----ELKCCGVNG-----PT---DFVDSTSFFRQKNEPNSPYPESCCKRN   78 (114)
T ss_pred             HHHHHHHHHHh----cccCcCCCC-----cH---HHHhhhHHhccCCCCCCcCCHHHcCcc
Confidence            46889999999    999999999     77   77543         1257999999753

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=99.19  E-value=5.6e-12  Score=101.82  Aligned_cols=98  Identities=15%  Similarity=0.144  Sum_probs=55.7

Q ss_pred             ccccccccccccccccccccCchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhh-----cC---------------
Q 023208          107 DRAYSEYHLEDYSGWLKDRVTDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSL-----RK---------------  166 (285)
Q Consensus       107 ~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~-----~~---------------  166 (285)
                      .+.++.|+.+++..    +...+.+||.+|+    +|+|||++|     |+   ||..     +.               
T Consensus        16 ~~~i~~Y~~~~~~~----~~~~~~~~D~lQ~----~fkCCG~~~-----y~---DW~~~~w~~n~y~~~~~~~~~~~~~~   79 (143)
T cd03162          16 KNAMKFYKDTDTPG----RCFLKKTIDMLQI----EFQCCGNNG-----YR---DWFEIQWISNRYLDFSSKEVKDRIKS   79 (143)
T ss_pred             HHHHHHhcCCcccc----hhhHHHHHHHHHH----hccCCCCCC-----hh---hhhhhhhhcccccCCCccchhhhhhc
Confidence            45566665433211    1136789999999    999999999     55   5532     11               


Q ss_pred             -------CCCCCCCCCCCC--CCCCcccccCcccCCCCCCCCCCCccccccCccccccccCcchHHHHHHHHHHh
Q 023208          167 -------LNPVQSGCCKPP--ADCGFVYENETLWNPGGGLVGSNPDCTRWSNDQEQLCYQCDSCKAGVLASLKKS  232 (285)
Q Consensus       167 -------~~~vP~SCC~~~--~~C~~~~~~~t~~~~~~~~~~~~~~c~~~~~~~~~gC~~~~GC~~~l~~~l~~~  232 (285)
                             ...||.|||.+.  ..|........    .+..  ..+.-+...++|+      +||.+++.+|+++.
T Consensus        80 ~~~~~~~~~~vP~SCc~~~~~~~C~~~~~~~~----~a~~--~~~~~~~~~~i~~------~GC~~~l~~~~~~~  142 (143)
T cd03162          80 NVDGRYLTDGVPFSCCNPSSPRPCIQHQITDN----SAHY--NYDYQTEELNLWT------RGCREALLEYYTSK  142 (143)
T ss_pred             ccccccccCCcCCcccCCCCCCchhhhccccc----cccc--ccccCcccccchH------HHHHHHHHHHHHhc
Confidence                   147999999864  34543211000    0000  0000011124555      57889999999864

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=99.18  E-value=2e-11  Score=93.58  Aligned_cols=69  Identities=10%  Similarity=0.200  Sum_probs=47.0

Q ss_pred             chhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcC-CCCCCCCCCCCCC-CCCcccccCcccCCCCCCCCCCCccc
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRK-LNPVQSGCCKPPA-DCGFVYENETLWNPGGGLVGSNPDCT  205 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~-~~~vP~SCC~~~~-~C~~~~~~~t~~~~~~~~~~~~~~c~  205 (285)
                      .+.+||.+|+    +|+|||+++     |+   ||.... ...||.|||.... .|+.....                 .
T Consensus        31 ~~~~~D~iQ~----~l~CCG~~~-----~~---DW~~~~~~~~vP~SCC~~~~~~C~~~~~~-----------------~   81 (103)
T cd03157          31 LTHAWNSFQT----EFKCCGVIY-----FT---DWLEMTEMEWPPDSCCSNQYPGCARQAHY-----------------N   81 (103)
T ss_pred             HHHHHHHHHH----hccCccCCC-----hh---HHhccCCCCCCCccccCCCCCCcCcCCCC-----------------c
Confidence            5789999999    999999999     87   996531 1359999997532 45422100                 0


Q ss_pred             cccCccccccccCcchHHHHHHHHHH
Q 023208          206 RWSNDQEQLCYQCDSCKAGVLASLKK  231 (285)
Q Consensus       206 ~~~~~~~~gC~~~~GC~~~l~~~l~~  231 (285)
                      ....+|+      +||.+++.++++.
T Consensus        82 ~~~~iy~------~GC~~~i~~~l~~  101 (103)
T cd03157          82 DLSDLYQ------EGCGPKIYSFIRG  101 (103)
T ss_pred             ccccccc------cchHHHHHHHHHh
Confidence            0013455      4677999999975

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=99.11  E-value=1.6e-11  Score=91.01  Aligned_cols=63  Identities=19%  Similarity=0.307  Sum_probs=46.3

Q ss_pred             CchhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCCCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCcccc
Q 023208          127 TDDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTR  206 (285)
Q Consensus       127 ~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~  206 (285)
                      ..+.+||.+|.    +|+|||++|     ++   ||.... ..||.|||.... +                     .|. 
T Consensus        27 ~~~~~~d~iq~----~l~CCG~~~-----~~---D~~~~~-~~vP~SCc~~~~-~---------------------~~~-   70 (90)
T cd03127          27 DFQEAMDALQS----TFECCGVNG-----PT---DYLDLR-LLVPSSCCKGTD-G---------------------NCG-   70 (90)
T ss_pred             hHHHHHHHHHH----hCcCcCCCC-----hH---HHccCC-CCCCHhhcCCCC-C---------------------CCc-
Confidence            35789999999    999999999     77   886532 579999996432 0                     111 


Q ss_pred             ccCccccccccCcchHHHHHHHHHHh
Q 023208          207 WSNDQEQLCYQCDSCKAGVLASLKKS  232 (285)
Q Consensus       207 ~~~~~~~gC~~~~GC~~~l~~~l~~~  232 (285)
                       ...|.      +||.+++.+++.++
T Consensus        71 -~~~~~------~GC~~~~~~~~~~~   89 (90)
T cd03127          71 -LNLYT------EGCLEKLVDFLRSN   89 (90)
T ss_pred             -cchhh------HccHHHHHHHHHhh
Confidence             12444      57779999999876

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=98.97  E-value=9e-11  Score=86.58  Aligned_cols=55  Identities=15%  Similarity=0.024  Sum_probs=40.6

Q ss_pred             chhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCCCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCccccc
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRW  207 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~  207 (285)
                      .+.+||.+|+    .|+|||++|     |.   ||      .||.||++.+.        .                   
T Consensus        30 ~~~~~d~iQ~----~l~CCG~~~-----~~---D~------~vP~SC~~~~~--------~-------------------   64 (84)
T cd03152          30 LKETLKAIHF----ALDCCGPTG-----GL---EQ------FVTDTCPKKEG--------L-------------------   64 (84)
T ss_pred             HHHHHHHHHH----HHcCCCCCC-----Cc---cc------ccCCCCCCCCc--------h-------------------
Confidence            3468999999    999999999     87   88      38999853111        0                   


Q ss_pred             cCccccccccCcchHHHHHHHHHHhh
Q 023208          208 SNDQEQLCYQCDSCKAGVLASLKKSW  233 (285)
Q Consensus       208 ~~~~~~gC~~~~GC~~~l~~~l~~~~  233 (285)
                      ..+|.      +||.+++.+++++++
T Consensus        65 ~~~~~------~gC~~~i~~~~~~~~   84 (84)
T cd03152          65 ENLIT------KSCPDAIDDVFNSKL   84 (84)
T ss_pred             hhhcc------CCCcHHHHHHHHccC
Confidence            12344      466699999998874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

>cd03151 CD81_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily

Probab=98.46  E-value=2.6e-08  Score=73.46  Aligned_cols=33  Identities=9%  Similarity=-0.038  Sum_probs=26.6

Q ss_pred             chhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCCCCCCCCCC
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCC  175 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~~~vP~SCC  175 (285)
                      .+.+||.+|+    .|+|||++|     ++   |+..   ..+|.+|.
T Consensus        30 ~~~~~d~iQ~----~l~CCG~~~-----~~---d~~~---~~~~~~C~   62 (84)
T cd03151          30 GTAVLKTFHS----TLDCCGKGN-----LT---ALLS---LLSTDLCP   62 (84)
T ss_pred             HHHHHHHHHH----hcCCCCCCC-----Cc---chHH---HHHhCCCC
Confidence            5678999999    999999999     77   6653   35777874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).

>PF05640 NKAIN: Na,K-Atpase Interacting protein; InterPro: IPR008516 NKAIN (Na,K-Atpase INteracting) proteins are a family of evolutionary conserved transmembrane proteins that localise to neurons, that are critical for neuronal function, and that interact with the beta subunits, beta1 in vertebrates and beta in Drosophila, of Na,K-ATPase

Probab=90.73  E-value=6.7  Score=33.39  Aligned_cols=48  Identities=17%  Similarity=0.249  Sum_probs=36.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Q 023208           43 QWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIGFI   90 (285)
Q Consensus        43 ~~~li~~G~~i~iis~lGc~Ga~~es~~lL~~Y~~ll~vl~i~ei~~~   90 (285)
                      +++-|.+-.+-+++-++|.+||..-++..+.+|.+-..+-+.--+-..
T Consensus        33 qWaPIl~NF~hIi~vIlGlFG~~QyR~ryi~~Y~vW~~~Wv~wNvfii   80 (200)
T PF05640_consen   33 QWAPILANFLHIIFVILGLFGAIQYRPRYIIVYAVWTALWVTWNVFII   80 (200)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhheeecchHHHHHHHHHHHHHHHhHHHH
Confidence            344555666667777899999999999999999988777666555443

NKAINs have highly conserved trans-membrane domains but otherwise no other characterised domains. NKAINs may function as subunits of pore or channel structures in neurons or they may affect the function of other membrane proteins. They are likely to function within the membrane bilayer [].

>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed

Probab=86.78  E-value=9.2  Score=32.36  Aligned_cols=53  Identities=13%  Similarity=0.092  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccCcchhhhhhhhh--HHHHHHHHHHHHHHHHH
Q 023208            8 IGLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWP--LIVIGVSIMVVSLAGFA   62 (285)
Q Consensus         8 L~~~N~lf~i~Gi~ll~~Gi~~~~~~~~~~~~~~~~~~--li~~G~~i~iis~lGc~   62 (285)
                      +-++-.+|+++|..++.+|...+.....+ ..+. ..+  .-.+|+.++++|.++.+
T Consensus         5 ~eiI~~vLLliG~~f~ligaIGLlRfPD~-YtRL-HAATKa~TLGv~LILlgv~l~~   59 (197)
T PRK12585          5 IEIIISIMILIGGLLSILAAIGVIRLPDV-YTRT-HAAGISNTFGVSLLLFATVGYF   59 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcH-HHHh-hccccchhhhHHHHHHHHHHHH
Confidence            44566678888999999998888876421 1121 122  55566666666655544

>PF11297 DUF3098: Protein of unknown function (DUF3098); InterPro: IPR021448 This bacterial family of proteins has no known function

Probab=86.73  E-value=0.8  Score=32.17  Aligned_cols=47  Identities=23%  Similarity=0.405  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccCcch----------hhhhhhhh-HHHHHHHHHHHH
Q 023208           11 LNFFTFLLSIPIIGGGIWLSSRANNTD----------CLKFLQWP-LIVIGVSIMVVS   57 (285)
Q Consensus        11 ~N~lf~i~Gi~ll~~Gi~~~~~~~~~~----------~~~~~~~~-li~~G~~i~iis   57 (285)
                      -|.+++.+|++++++|-++.+-....+          ..+....| ++..|.++.+.+
T Consensus         6 ~Nyill~iG~~vIilGfilMsg~~s~dp~~fn~~Ifs~~rI~vAPiv~~~Gf~~~i~A   63 (69)
T PF11297_consen    6 KNYILLAIGIAVIILGFILMSGGGSDDPNVFNPDIFSFRRITVAPIVVLIGFVIIIYA   63 (69)
T ss_pred             HHHHHHHHHHHHHHHHHHheeCCCCCCccccCccccceeeEEehhHHHHHHHHHHhhe
Confidence            599999999999999999988654322          11223356 566666555543

>PF10724 DUF2516: Protein of unknown function (DUF2516); InterPro: IPR019662 This entry represents a conserved protein in Actinobacteria

Probab=86.19  E-value=6.4  Score=29.82  Aligned_cols=30  Identities=17%  Similarity=0.298  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcccCc
Q 023208            6 HLIGLLNFFTFLLSIPIIGGGIWLSSRANN   35 (285)
Q Consensus         6 ~~L~~~N~lf~i~Gi~ll~~Gi~~~~~~~~   35 (285)
                      .+..+.+.+++++.++.+++++|.+.+--.
T Consensus         3 ~l~~~~~~i~~~l~~~~~~~~v~Alv~aa~   32 (100)
T PF10724_consen    3 FLFQIQGWILLALSLVALVLAVWALVDAAR   32 (100)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            566778899999999999999999988643

The function is not known.

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=84.98  E-value=1.2  Score=35.33  Aligned_cols=36  Identities=19%  Similarity=0.411  Sum_probs=20.4

Q ss_pred             HHHHHHHHHHHHHHh-hhhhcccccCCCCCccccccc
Q 023208          241 IVVLIILVIFYVIGC-AAFRNNRRIDNDEPYGEARMT  276 (285)
Q Consensus       241 ~~i~~iqii~~~~a~-~l~~~~~~~~~~~~~~~~~~~  276 (285)
                      ++++++-++.+++.+ +..|+.||++.++-||+.-|+
T Consensus         5 ~~iii~~i~l~~~~~~~~~rRR~r~G~~P~~gt~w~~   41 (130)
T PF12273_consen    5 FAIIIVAILLFLFLFYCHNRRRRRRGLQPIYGTRWMA   41 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCceecC
Confidence            333333333333333 334444555788999999998

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=83.69  E-value=3  Score=35.06  Aligned_cols=22  Identities=23%  Similarity=0.418  Sum_probs=11.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhc
Q 023208           10 LLNFFTFLLSIPIIGGGIWLSS   31 (285)
Q Consensus        10 ~~N~lf~i~Gi~ll~~Gi~~~~   31 (285)
                      +.+++..++|+++++.|+-++.
T Consensus         6 i~~i~~iilgilli~~gI~~Lv   27 (191)
T PF04156_consen    6 IISIILIILGILLIASGIAALV   27 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555543

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins

Probab=83.40  E-value=11  Score=25.74  Aligned_cols=48  Identities=21%  Similarity=0.279  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHhhhcccCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 023208           17 LLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNT   69 (285)
Q Consensus        17 i~Gi~ll~~Gi~~~~~~~~~~~~~~~~~~li~~G~~i~iis~lGc~Ga~~es~   69 (285)
                      +.|++.+.+|+++...++..     .......+|..+++.|......+.++++
T Consensus         1 i~Gil~iv~Gi~~l~~p~~~-----~~~~~~i~g~~~i~~Gi~~l~~~~~~~~   48 (72)
T PF03729_consen    1 ISGILFIVLGILLLFNPDAS-----LAALAIILGIWLIISGIFQLISAFRRRK   48 (72)
T ss_pred             CHHHHHHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            46889999999999988522     2233788899999999999988888543

It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).

>PF04103 CD20: CD20-like family; InterPro: IPR007237 This family includes the CD20 protein and the beta subunit of the high affinity receptor for IgE Fc

Probab=82.69  E-value=0.39  Score=38.42  Aligned_cols=72  Identities=19%  Similarity=0.201  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHhhhcccCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 023208           14 FTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAALIG   88 (285)
Q Consensus        14 lf~i~Gi~ll~~Gi~~~~~~~~~~~~~~~~~~li~~G~~i~iis~lGc~Ga~~es~~lL~~Y~~ll~vl~i~ei~   88 (285)
                      +-.++|++.+.+|+.+.......  ...... -+-.|++.++.|.+|..+..|.+++++..+.++-++.++.-++
T Consensus         5 ~qI~lGi~~i~lGi~~~~~~~~~--~~~~~~-piW~G~~fiisG~l~i~s~k~~~~~lv~~~l~lsi~s~~~a~~   76 (150)
T PF04103_consen    5 IQILLGILSIVLGIIALSLSSSV--LVYIGY-PIWGGIFFIISGILGIASEKKPTKCLVIASLVLSIVSALLALA   76 (150)
T ss_dssp             ---------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHH--HHHhcc-cHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHH
Confidence            45678888888998888765431  111222 3445889999999999999999999998888776666655443

The high affinity receptor for IgE is a tetrameric structure consisting of a single IgE-binding alpha subunit, a single beta subunit, and two disulphide-linked gamma subunits. The alpha subunit of Fc epsilon RI and most Fc receptors are homologous members of the Ig superfamily. By contrast, the beta and gamma subunits from Fc epsilon RI are not homologous to the Ig superfamily. Both molecules have four putative transmembrane segments and a probably topology where both amino- and carboxy termini protrude into the cytoplasm []. This family also includes LR8 like proteins from humans, mice and rats. The function of the human LR8 protein is unknown although it is known to be strongly expressed in the lung fibroblasts []. This family also includes sarcospan is a transmembrane component of dystrophin-associated glycoprotein. Loss of the sarcoglycan complex and sarcospan alone is sufficient to cause muscular dystrophy. The role of the sarcoglycan complex and sarcospan is thought to be to strengthen the dystrophin axis connecting the basement membrane with the cytoskeleton []. ; GO: 0016021 integral to membrane; PDB: 2OSL_Q 3BKY_P 3PP4_P.

>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins

Probab=81.53  E-value=3.6  Score=32.04  Aligned_cols=49  Identities=18%  Similarity=0.318  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccCcchhhhhhhhhHHHHHHHHHHHHHH
Q 023208            9 GLLNFFTFLLSIPIIGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLA   59 (285)
Q Consensus         9 ~~~N~lf~i~Gi~ll~~Gi~~~~~~~~~~~~~~~~~~li~~G~~i~iis~l   59 (285)
                      +.+-++++++|.+++++|+.+....-..+  .--.++++++|+++++=|+-
T Consensus        44 I~la~~Lli~G~~li~~g~l~~~~~i~~~--~~~~~~llilG~L~fIPG~Y   92 (115)
T PF05915_consen   44 IALAVFLLIFGTVLIIIGLLLFFGHIDGD--RDRGWALLILGILCFIPGFY   92 (115)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCCC--CcccchHHHHHHHHHhccHH
Confidence            45567788999999999999888762111  11245689999998876654

The function of this currently unknown.

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=81.53  E-value=3.8  Score=39.33  Aligned_cols=43  Identities=16%  Similarity=0.337  Sum_probs=34.3

Q ss_pred             hhh-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 023208           43 QWP-LIVIGVSIMVVSLAGFAGACYRNTHLMRFYLFVMFFIIAA   85 (285)
Q Consensus        43 ~~~-li~~G~~i~iis~lGc~Ga~~es~~lL~~Y~~ll~vl~i~   85 (285)
                      .+| .++.=.+.+++.+++++|.+|+|||++++|.++=++.+++
T Consensus       209 RW~~~v~lL~l~LvvC~v~vlglak~Skc~li~fsv~Gll~lvi  252 (526)
T KOG4433|consen  209 RWLAYVLLLTLLLVVCLVLVLGLAKRSKCLLIVFSVCGLLALVI  252 (526)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHH
Confidence            455 6666678889999999999999999999988765554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	99.07

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=99.07  E-value=1.3e-12  Score=96.47  Aligned_cols=59  Identities=8%  Similarity=0.141  Sum_probs=44.1

Q ss_pred             chhhHHHhhhccccCCCcCCCcccCCCCCCchhhhhhcCCCCCCCCCCCCCCCCCcccccCcccCCCCCCCCCCCccccc
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRRVINGAPETADMFSLRKLNPVQSGCCKPPADCGFVYENETLWNPGGGLVGSNPDCTRW  207 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~~~~~dw~~~~~~~vP~SCC~~~~~C~~~~~~~t~~~~~~~~~~~~~~c~~~  207 (285)
                      .+.+||.+|+    .|+|||++|     |+   ||..   ..||.|||.....                       +.  
T Consensus        31 ~~~~~d~iQ~----~l~CCG~~~-----~~---Dw~~---~~vP~ScC~~~~~-----------------------~~--   70 (90)
T 1g8q_A           31 AKAVVKTFHE----TLDCCGSST-----LT---ALTT---SVLKNNLCPSGSN-----------------------II--   70 (90)
T ss_dssp             HHHHHHHHHH----HHTCCSCTT-----CG---GGHH---HHHHTTCSCTTCC-----------------------HH--
T ss_pred             HHHHHHHHHH----hhcCCCCCC-----hh---hhcc---CCCCCCCCCCCCC-----------------------Cc--
Confidence            4789999999    999999999     87   9964   2489999964211                       11  


Q ss_pred             cCccccccccCcchHHHHHHHHHHh
Q 023208          208 SNDQEQLCYQCDSCKAGVLASLKKS  232 (285)
Q Consensus       208 ~~~~~~gC~~~~GC~~~l~~~l~~~  232 (285)
                      +.+|.      +||.+++.+|++++
T Consensus        71 ~~~~~------~GC~~~i~~~~~~n   89 (90)
T 1g8q_A           71 SNLFK------EDCHQKIDDLFSGK   89 (90)
T ss_dssp             HHHTS------CCHHHHHHHHHHTC
T ss_pred             ccCcc------CCcHHHHHHHHHhC
Confidence            13455      46779999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	285
d1g8qa_	90	CD81 extracellular domain {Human (Homo sapiens) [T	85.06

>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Tetraspanin
superfamily: Tetraspanin
family: Tetraspanin
domain: CD81 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.06  E-value=0.017  Score=40.09  Aligned_cols=19  Identities=5%  Similarity=-0.004  Sum_probs=16.4

Q ss_pred             chhhHHHhhhccccCCCcCCCcc
Q 023208          128 DDSYWGKISSCIRDSKVCPKMRR  150 (285)
Q Consensus       128 ~~~~~d~iQ~~~~~~~~CCG~~~  150 (285)
                      .++.+..+|.    .|+|||..|
T Consensus        31 ~k~tLk~fH~----~L~CCG~~~   49 (90)
T d1g8qa_          31 AKAVVKTFHE----TLDCCGSST   49 (90)
T ss_dssp             HHHHHHHHHH----HHTCCSCTT
T ss_pred             HHHHHHHHHH----HHccCCCCC
Confidence            4557889999    999999998