Citrus Sinensis ID: 023262


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLSTNNMTASEEQTNSRNNFDDKNEHEQANDQHEKARESCNQDPLNKC
ccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHEEEEEEcccccccccccccccccccEEEEcccccccccccccccccccccccccccccHHHHHcccccccccccc
cccHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcHcHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHcccccccHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccHHHcccc
mtmfsthdpsvfafgLLGNIVSFIVflapmptfyrvckkkstegfqSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEdvnkvpehTVDVVKLStnnmtaseeqtnsrnnfddkneheqANDQHEKARescnqdplnkc
mtmfsthdPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEdvnkvpehtvdvvklstnnmtaseeqtnsrnnfddknEHEQANdqhekarescnqdplnkc
MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARlytlrlllllnfggfgsilllshflAKGSAARLRLLGWVCvvfsvsvfaaPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLSTNNMTASEEQTNSRNNFDDKNEHEQANDQHEKARESCNQDPLNKC
*********SVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVK***********************************************
***********FAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYR*********************************************************************
MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLSTNNM*********RNNFDD**************************
****STHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVV*******EHTVDVVKLST********************************************
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLSTNNMTASEEQTNSRNNFDDxxxxxxxxxxxxxxxxxxxxxPLNKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query285 2.2.26 [Sep-21-2011]
O82587285 Bidirectional sugar trans yes no 0.957 0.957 0.555 8e-87
Q9FGQ2294 Bidirectional sugar trans no no 0.824 0.799 0.645 1e-83
Q9SMM5289 Bidirectional sugar trans no no 0.954 0.941 0.529 2e-82
Q9SW25281 Bidirectional sugar trans no no 0.943 0.957 0.571 2e-82
B8BKP4303 Bidirectional sugar trans N/A no 0.936 0.881 0.562 1e-80
Q2R3P9303 Bidirectional sugar trans yes no 0.842 0.792 0.613 2e-80
A2X5B4319 Bidirectional sugar trans N/A no 0.771 0.689 0.604 3e-75
P93332268 Bidirectional sugar trans N/A no 0.919 0.977 0.551 3e-75
Q6K602319 Bidirectional sugar trans no no 0.771 0.689 0.604 4e-75
Q9FY94292 Bidirectional sugar trans no no 0.982 0.958 0.477 1e-74
>sp|O82587|SWT12_ARATH Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana GN=SWEET12 PE=2 SV=1 Back     alignment and function desciption
 Score =  320 bits (820), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 160/288 (55%), Positives = 211/288 (73%), Gaps = 15/288 (5%)

Query: 1   MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLW 60
           M +F TH+   F FGLLGN++SF VFL+P+PTFYR+CKKK+TEGFQS+PYVVALFSAMLW
Sbjct: 1   MALFDTHNTWAFVFGLLGNLISFAVFLSPVPTFYRICKKKTTEGFQSIPYVVALFSAMLW 60

Query: 61  IYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILL 120
           +YYA  KKD FLL+TIN+FGC IETIY+++++ FA K+AR+ T++LLLL+NFGGF  ILL
Sbjct: 61  LYYATQKKDVFLLVTINSFGCFIETIYISIFVAFASKKARMLTVKLLLLMNFGGFCLILL 120

Query: 121 LSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAV 180
           L  FLAKG+  R +++G +CV FSV VFAAPLSI+R V++TKSVE+MPF LSL LT++AV
Sbjct: 121 LCQFLAKGT-TRAKIIGGICVGFSVCVFAAPLSIIRTVIKTKSVEYMPFSLSLTLTISAV 179

Query: 181 MWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRV--VVE---DVNKVPEHTVD 235
           +W  YGL LKD+YVA PNV+GF+ G +QMILY +Y+  +    +VE   +  K+PE ++D
Sbjct: 180 IWLLYGLALKDIYVAFPNVIGFVLGALQMILYVVYKYCKTPSDLVEKELEAAKLPEVSID 239

Query: 236 VVKLSTNNMTASE-------EQTNSRNNFDDKNEHEQANDQHEKARES 276
           +VKL T  +T+ E          N+ N  D   E E        A  +
Sbjct: 240 MVKLGT--LTSPEPVAITVVRSVNTCNCNDRNAEIENGQGVRNSAATT 285




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FGQ2|SWT13_ARATH Bidirectional sugar transporter SWEET13 OS=Arabidopsis thaliana GN=SWEET13 PE=2 SV=1 Back     alignment and function description
>sp|Q9SMM5|SWT11_ARATH Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana GN=SWEET11 PE=1 SV=1 Back     alignment and function description
>sp|Q9SW25|SWT14_ARATH Bidirectional sugar transporter SWEET14 OS=Arabidopsis thaliana GN=SWEET14 PE=3 SV=1 Back     alignment and function description
>sp|B8BKP4|SWT14_ORYSI Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. indica GN=SWEET14 PE=2 SV=1 Back     alignment and function description
>sp|Q2R3P9|SWT14_ORYSJ Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. japonica GN=SWEET14 PE=2 SV=1 Back     alignment and function description
>sp|A2X5B4|SWT15_ORYSI Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. indica GN=SWEET15 PE=3 SV=1 Back     alignment and function description
>sp|P93332|NOD3_MEDTR Bidirectional sugar transporter N3 OS=Medicago truncatula GN=N3 PE=2 SV=1 Back     alignment and function description
>sp|Q6K602|SWT15_ORYSJ Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica GN=SWEET15 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY94|SWT15_ARATH Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
255540123297 conserved hypothetical protein [Ricinus 0.964 0.925 0.665 1e-99
449503339291 PREDICTED: bidirectional sugar transport 0.901 0.883 0.634 5e-92
224136248275 predicted protein [Populus trichocarpa] 0.954 0.989 0.591 8e-91
449454808291 PREDICTED: bidirectional sugar transport 0.901 0.883 0.630 2e-90
357464993311 Protein RUPTURED POLLEN GRAIN [Medicago 0.964 0.884 0.553 2e-90
449503337294 PREDICTED: bidirectional sugar transport 0.957 0.928 0.580 6e-89
449472119295 PREDICTED: bidirectional sugar transport 0.870 0.840 0.612 2e-87
449454810295 PREDICTED: bidirectional sugar transport 0.870 0.840 0.608 5e-87
356516515309 PREDICTED: bidirectional sugar transport 0.950 0.877 0.573 2e-86
147776011273 hypothetical protein VITISV_023352 [Viti 0.926 0.967 0.607 4e-86
>gi|255540123|ref|XP_002511126.1| conserved hypothetical protein [Ricinus communis] gi|223550241|gb|EEF51728.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 187/281 (66%), Positives = 227/281 (80%), Gaps = 6/281 (2%)

Query: 1   MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLW 60
           M +F+TH+PSVF FGLLGNIVSF+VFLAP+PTF RVCKKKSTEGFQS PYVV+LFSAMLW
Sbjct: 1   MAIFNTHNPSVFVFGLLGNIVSFVVFLAPVPTFLRVCKKKSTEGFQSFPYVVSLFSAMLW 60

Query: 61  IYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILL 120
           +YYA +K DAFLLITIN+ GC+IETIY+ L+IT+APKQAR+ TL++LLLLNFGGF  ILL
Sbjct: 61  LYYASLKSDAFLLITINSVGCLIETIYITLFITYAPKQARITTLKILLLLNFGGFCLILL 120

Query: 121 LSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAV 180
           LSHFLAKGS  R  +LGWVCV+FSVSVFAAPLS+MR+V+RTKSVEFMPFYLS FLTL+A+
Sbjct: 121 LSHFLAKGS-ERATILGWVCVIFSVSVFAAPLSVMRIVIRTKSVEFMPFYLSFFLTLSAI 179

Query: 181 MWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLS 240
           MW FYGL LKD+Y+AVPN+LG +FGV+QMILY IY+N + VV E   K+PEH VD VKLS
Sbjct: 180 MWLFYGLLLKDLYIAVPNILGLVFGVLQMILYVIYKNVKTVVEEP--KLPEHNVDNVKLS 237

Query: 241 TNNMTASEEQ--TNSRNNFDDKNEHEQANDQHEKARESCNQ 279
                  +++  + S+ N DD   H +    H+    +  +
Sbjct: 238 AVITCEVQQEVCSQSQPNGDD-GAHNKEQKMHDNPANAVTE 277




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503339|ref|XP_004161953.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224136248|ref|XP_002322282.1| predicted protein [Populus trichocarpa] gi|222869278|gb|EEF06409.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449454808|ref|XP_004145146.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] gi|449472123|ref|XP_004153502.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357464993|ref|XP_003602778.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355491826|gb|AES73029.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] Back     alignment and taxonomy information
>gi|449503337|ref|XP_004161952.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449472119|ref|XP_004153501.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454810|ref|XP_004145147.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356516515|ref|XP_003526939.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Glycine max] Back     alignment and taxonomy information
>gi|147776011|emb|CAN71371.1| hypothetical protein VITISV_023352 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
TAIR|locus:2157951294 SWEET13 [Arabidopsis thaliana 0.835 0.809 0.555 1.1e-68
UNIPROTKB|P93332268 N3 "Bidirectional sugar transp 0.919 0.977 0.490 9.4e-66
TAIR|locus:2171721285 SWEET12 [Arabidopsis thaliana 0.859 0.859 0.513 1.2e-65
TAIR|locus:2117263281 SWEET14 [Arabidopsis thaliana 0.943 0.957 0.503 2.9e-64
UNIPROTKB|B8BKP4303 SWEET14 "Bidirectional sugar t 0.838 0.788 0.529 2.6e-63
UNIPROTKB|Q2R3P9303 SWEET14 "Bidirectional sugar t 0.838 0.788 0.529 2.6e-63
TAIR|locus:2114540289 SWEET11 [Arabidopsis thaliana 0.842 0.830 0.504 3.8e-62
UNIPROTKB|A2X5B4319 SWEET15 "Bidirectional sugar t 0.831 0.742 0.502 1.3e-61
UNIPROTKB|Q6K602319 SWEET15 "Bidirectional sugar t 0.831 0.742 0.502 1.3e-61
TAIR|locus:2179867292 SAG29 "senescence-associated g 0.838 0.818 0.470 1.5e-60
TAIR|locus:2157951 SWEET13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 667 (239.9 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
 Identities = 135/243 (55%), Positives = 167/243 (68%)

Query:     3 MFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIY 62
             M  T++   F FG+LGNI+SF+VFLAP+PTF R+CKKKSTEGFQSLPYV ALFSAMLWIY
Sbjct:     1 MALTNNLWAFVFGILGNIISFVVFLAPVPTFVRICKKKSTEGFQSLPYVSALFSAMLWIY 60

Query:    63 YAMMKKD-AFLLITINAFGCVIETIYLALYITFAPKQARXXXXXXXXXXXXXXXXXXXXX 121
             YAM K   AFLLITINAFGCVIETIY+ L++++A K+ R                     
Sbjct:    61 YAMQKDGTAFLLITINAFGCVIETIYIVLFVSYANKKTRISTLKVLGLLNFLGFAAIVLV 120

Query:   122 XXXXAKGSAARLRLLGWVCXXXXXXXXXXPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVM 181
                  KGS  R ++LG +C          PLSIMR+VVRT+SVEFMPF LSLFLT++AV 
Sbjct:   121 CELLTKGST-REKVLGGICVGFSVSVFAAPLSIMRVVVRTRSVEFMPFSLSLFLTISAVT 179

Query:   182 WFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNK---VPEHTVDVVK 238
             W FYGL +KD YVA+PNVLG   G VQMILY I++ Y+  V +  +K   V +H++D+ K
Sbjct:   180 WLFYGLAIKDFYVALPNVLGAFLGAVQMILYIIFKYYKTPVAQKTDKSKDVSDHSIDIAK 239

Query:   239 LST 241
             L+T
Sbjct:   240 LTT 242


GO:0005886 "plasma membrane" evidence=ISM
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
GO:0008515 "sucrose transmembrane transporter activity" evidence=IDA
GO:0015770 "sucrose transport" evidence=IDA
UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] Back     alignment and assigned GO terms
TAIR|locus:2171721 SWEET12 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117263 SWEET14 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|B8BKP4 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q2R3P9 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2114540 SWEET11 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P93332NOD3_MEDTRNo assigned EC number0.55130.91920.9776N/Ano
Q2R3P9SWT14_ORYSJNo assigned EC number0.61320.84210.7920yesno
O82587SWT12_ARATHNo assigned EC number0.55550.95780.9578yesno
B8BKP4SWT14_ORYSINo assigned EC number0.56290.93680.8811N/Ano
Q9FPN0NEC1_PETHYNo assigned EC number0.50780.85960.9245N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00017991001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (270 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 2e-31
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 3e-30
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score =  111 bits (281), Expect = 2e-31
 Identities = 43/86 (50%), Positives = 59/86 (68%)

Query: 135 LLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYV 194
           LLG +CVVFSV+VF +PLSI+R V++TKSVE MPF   L   L+A +W  YGL  KD Y+
Sbjct: 2   LLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGYI 61

Query: 195 AVPNVLGFIFGVVQMILYAIYRNYRR 220
            +PN +G + G + +IL+ IY   + 
Sbjct: 62  IIPNGVGCVLGTIYLILFIIYPPKKA 87


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 285
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.85
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.85
KOG1623243 consensus Multitransmembrane protein [General func 99.48
COG409589 Uncharacterized conserved protein [Function unknow 99.18
COG409589 Uncharacterized conserved protein [Function unknow 99.14
TIGR00951220 2A43 Lysosomal Cystine Transporter. 98.81
PF0419361 PQ-loop: PQ loop repeat 98.27
KOG3211230 consensus Predicted endoplasmic reticulum membrane 98.07
PF0419361 PQ-loop: PQ loop repeat 97.82
KOG2913260 consensus Predicted membrane protein [Function unk 96.5
TIGR00951220 2A43 Lysosomal Cystine Transporter. 95.2
PRK01021 608 lpxB lipid-A-disaccharide synthase; Reviewed 94.89
smart0067932 CTNS Repeated motif present between transmembrane 94.88
PHA02246192 hypothetical protein 94.87
smart0067932 CTNS Repeated motif present between transmembrane 91.5
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 90.16
PHA02246192 hypothetical protein 88.98
PF10688163 Imp-YgjV: Bacterial inner membrane protein; InterP 88.74
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 82.58
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=6.1e-51  Score=366.16  Aligned_cols=229  Identities=49%  Similarity=0.892  Sum_probs=200.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCcCCccchhHHHHHHHHHHHHHHhhhcC-CceeEEeehhHHHHHHH
Q 023262            7 HDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKK-DAFLLITINAFGCVIET   85 (285)
Q Consensus         7 ~~~~~~~~g~lg~i~si~m~lSPlp~i~~I~K~Kst~~~s~~p~v~~l~n~~lWl~YG~l~~-d~~~li~~N~~G~~l~~   85 (285)
                      ++....++|.+|+++++.+|++|+|+++||+|+||+|++|+.||+++++||++|+.||.+++ |. .++.+|.+|+++++
T Consensus         2 ~~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~-llitIN~~G~~ie~   80 (243)
T KOG1623|consen    2 GNVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDY-LLITINGIGLVIET   80 (243)
T ss_pred             cchHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCce-EEEEEehhcHHHHH
Confidence            56778999999999999999999999999999999999999999999999999999999888 65 68999999999999


Q ss_pred             HHHHhHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhheecchhHHHHhhhhhHHHHHHHHhhcccchhheeeecCccc
Q 023262           86 IYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVE  165 (285)
Q Consensus        86 ~y~~vf~~y~~~k~r~~~~~~~~~~~~~~~~~i~l~t~~~~~~~~~~~~i~G~i~~v~si~~~~sPL~~i~~VirtKs~~  165 (285)
                      +|+..|+.|+++|+...   .....+.++++++++++....++++.|.+.+|++|.+++++||+|||..+|+|||+||+|
T Consensus        81 ~Yi~~f~~ya~~k~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE  157 (243)
T KOG1623|consen   81 VYISIFLYYAPKKKTVK---IVLALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVE  157 (243)
T ss_pred             HHHHHHheecCchheeE---eeehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCcee
Confidence            99999999999876221   222233456666677778888888788999999999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHhhhcccCeeEEechhHHHHHHHHHhhheeEEcCCccchhcccccCCCccccceec
Q 023262          166 FMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKL  239 (285)
Q Consensus       166 ~~p~~~~~~~~~n~~lW~~YGll~~D~~i~ipN~iG~~l~~~ql~l~~iy~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      +||++++++.++++..|++||++++|.|+.+||++|++++++||++|++|++++.+.....++..|++.+..+.
T Consensus       158 ~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~~~~~~~~~~~~~~~~~~~~  231 (243)
T KOG1623|consen  158 YMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTEKIVPPKQNKKDVVVDEVLL  231 (243)
T ss_pred             eechHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcccccccccccCCcccccccc
Confidence            99999999999999999999999999999999999999999999999999988754433334445555555553



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 25/131 (19%)

Query: 2   TMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYR-----VCKKKSTEGFQSL-------- 48
            + +T    V  F L     + I       T        +  K      Q L        
Sbjct: 268 ILLTTRFKQVTDF-LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 49  PYVVALFSAML------WIYYAMMKKDAFLLITINAFGCVIE-TIYLALYITFA--PKQA 99
           P  +++ +  +      W  +  +  D  L   I +   V+E   Y  ++   +  P  A
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDK-LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 100 RLYTLRLLLLL 110
            +    LL L+
Sbjct: 386 HI-PTILLSLI 395


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00