Citrus Sinensis ID: 023323


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
cHHHcccccEEEEEEcccccHHHHHcEEEEcccccccccccccccEEEEEEEcccEEEEEEEcccEEEcccccccccccccEEEEcccccHHccccccccEEEEEccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccc
cHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEEcccEEEEEEEEccEEEEEEEccEEEEcccccccccccccEEEEHHHHHHHHHHcccccEEEEEcEEEEEccccEEEEcccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEHHHHHHHHcccccHEccccccccHHHHcccccccccccccccccccHHHHHHHHHHHcc
mletlrgkrmmfvgdslnrgqYISMVCLLHRlvpenaksmetfdSLTVFTAKDYNTTIEfywapfllksnadnavIHRITDRIvrkgsidnhgqhwkgADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKlnmdpkktrvfftsmspthaksiewggepgkncynettpiedpnywgsdcdKRIMQVIGEvfgnskfpitfLNITQLSSYRKDAHTsiykkqwnplspeqvanpvsyadcthwclpglqdtWNELLFTKLFYP
mletlrgkrmmfvgdslnrGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKgsidnhgqhwkgADILVFNTYLWWMTGQKMKIlkgsfddeKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPthaksiewggepgKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
*********MMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFY*
ML***RGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQ***************ADCTHWCLPGLQDTWNELLFTKLFYP
MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiii
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MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
359486373 419 PREDICTED: uncharacterized protein LOC10 1.0 0.677 0.838 1e-145
357461395 433 hypothetical protein MTR_3g071650 [Medic 1.0 0.655 0.841 1e-145
255559543 421 conserved hypothetical protein [Ricinus 1.0 0.674 0.838 1e-143
356569284 436 PREDICTED: uncharacterized protein LOC10 1.0 0.651 0.820 1e-142
449460876 429 PREDICTED: uncharacterized protein LOC10 1.0 0.662 0.823 1e-142
449530089366 PREDICTED: uncharacterized LOC101220068, 1.0 0.775 0.823 1e-142
224098734 425 predicted protein [Populus trichocarpa] 1.0 0.668 0.809 1e-139
356540007 442 PREDICTED: uncharacterized protein LOC10 1.0 0.642 0.809 1e-139
357492809 488 CCP [Medicago truncatula] gi|355518028|g 1.0 0.581 0.813 1e-139
224112437354 predicted protein [Populus trichocarpa] 1.0 0.802 0.785 1e-137
>gi|359486373|ref|XP_002277384.2| PREDICTED: uncharacterized protein LOC100262072 [Vitis vinifera] gi|297736550|emb|CBI25421.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 238/284 (83%), Positives = 266/284 (93%)

Query: 1   MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEF 60
           MLETLRGKRMMFVGDSLNRGQY+SMVCLLH L+PE+AKSMETFDSLT+FTAK+YN TIEF
Sbjct: 136 MLETLRGKRMMFVGDSLNRGQYVSMVCLLHSLIPEDAKSMETFDSLTIFTAKEYNATIEF 195

Query: 61  YWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILK 120
           YWAPFLL+SN+D+AVIHR++DRIVRKGSI+ HG++WKG DILVFNTYLWWMTG KMKIL+
Sbjct: 196 YWAPFLLESNSDDAVIHRVSDRIVRKGSINKHGKYWKGVDILVFNTYLWWMTGLKMKILR 255

Query: 121 GSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEP 180
           GSFDDE K+IVE+ TE+A+RM MKSML+WV+ NMDPKKTRVFFTSMSP+HAKSI+WGGE 
Sbjct: 256 GSFDDEVKDIVEITTEDAFRMAMKSMLKWVEKNMDPKKTRVFFTSMSPSHAKSIDWGGEA 315

Query: 181 GKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIY 240
           GKNCYNETT IEDP YWGSDC K +M+VIGEVF  SK PITFLNITQLSSYR+DAHTSIY
Sbjct: 316 GKNCYNETTMIEDPTYWGSDCRKSVMEVIGEVFSKSKVPITFLNITQLSSYRRDAHTSIY 375

Query: 241 KKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFYP 284
           KKQW+PL+PEQ+ANPVSYADC HWCLPGLQDTWNELLFTKLFYP
Sbjct: 376 KKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFTKLFYP 419




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461395|ref|XP_003600979.1| hypothetical protein MTR_3g071650 [Medicago truncatula] gi|355490027|gb|AES71230.1| hypothetical protein MTR_3g071650 [Medicago truncatula] Back     alignment and taxonomy information
>gi|255559543|ref|XP_002520791.1| conserved hypothetical protein [Ricinus communis] gi|223539922|gb|EEF41500.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356569284|ref|XP_003552833.1| PREDICTED: uncharacterized protein LOC100782397 [Glycine max] Back     alignment and taxonomy information
>gi|449460876|ref|XP_004148170.1| PREDICTED: uncharacterized protein LOC101220068 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449530089|ref|XP_004172029.1| PREDICTED: uncharacterized LOC101220068, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|224098734|ref|XP_002311248.1| predicted protein [Populus trichocarpa] gi|222851068|gb|EEE88615.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356540007|ref|XP_003538483.1| PREDICTED: uncharacterized protein LOC100807879 [Glycine max] Back     alignment and taxonomy information
>gi|357492809|ref|XP_003616693.1| CCP [Medicago truncatula] gi|355518028|gb|AES99651.1| CCP [Medicago truncatula] Back     alignment and taxonomy information
>gi|224112437|ref|XP_002316189.1| predicted protein [Populus trichocarpa] gi|222865229|gb|EEF02360.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
TAIR|locus:2063125425 TBL33 "AT2G40320" [Arabidopsis 0.996 0.665 0.784 5.2e-129
TAIR|locus:2082078487 ESK1 "ESKIMO 1" [Arabidopsis t 0.982 0.572 0.529 3e-78
TAIR|locus:2179172434 TBL3 "TRICHOME BIREFRINGENCE-L 0.985 0.645 0.498 7.1e-77
TAIR|locus:2065069424 TBL28 "TRICHOME BIREFRINGENCE- 0.989 0.662 0.508 1.9e-74
TAIR|locus:2057145410 TBL34 "AT2G38320" [Arabidopsis 0.971 0.673 0.450 1e-68
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.961 0.491 0.375 5.2e-49
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.957 0.447 0.373 3.3e-47
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.947 0.566 0.362 1.2e-42
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.929 0.656 0.372 1.5e-42
TAIR|locus:2080280379 TBL36 "AT3G54260" [Arabidopsis 0.901 0.675 0.339 9.6e-41
TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 222/283 (78%), Positives = 257/283 (90%)

Query:     1 MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEF 60
             MLETLRGKRMM+VGDSLNRG ++SM+CLLHRL+PE+ KS++T  SLTVFTAK+YN TIEF
Sbjct:   142 MLETLRGKRMMYVGDSLNRGMFVSMICLLHRLIPEDQKSIKTNGSLTVFTAKEYNATIEF 201

Query:    61 YWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILK 120
             YWAPFLL+SN+D+A++HRI+DR+VRKGSI+ HG+HWKG DI++FNTYLWWMTG KM IL+
Sbjct:   202 YWAPFLLESNSDDAIVHRISDRVVRKGSINKHGRHWKGVDIIIFNTYLWWMTGLKMNILQ 261

Query:   121 GSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGEP 180
             GSFDD++K IVE+ TE+AYRM MKSMLRWVK NMD KKTRVFFTSMSPTHAK I+WGGEP
Sbjct:   262 GSFDDKEKNIVEVSTEDAYRMGMKSMLRWVKNNMDRKKTRVFFTSMSPTHAKGIDWGGEP 321

Query:   181 GKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHTSIY 240
             G+NCYN+TT IEDP+YWGSDC K IM+VIGEVFG SK PIT LNITQ+S+YRKDAHTSIY
Sbjct:   322 GQNCYNQTTLIEDPSYWGSDCRKSIMKVIGEVFGRSKTPITLLNITQMSNYRKDAHTSIY 381

Query:   241 KKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFY 283
             KKQW+PL+ EQ+ NP SYADC HWCLPGLQDTWNELLF KLFY
Sbjct:   382 KKQWSPLTAEQLENPTSYADCVHWCLPGLQDTWNELLFAKLFY 424




GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00029364001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (339 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-100
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 8e-69
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  293 bits (753), Expect = e-100
 Identities = 116/284 (40%), Positives = 158/284 (55%), Gaps = 25/284 (8%)

Query: 1   MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEF 60
            LE LRGKR++FVGDSL+R Q+ S+VCLL ++ P   K++E    L  F  KDYN TIEF
Sbjct: 9   FLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFKDYNVTIEF 68

Query: 61  YWAPFLLKSNADNAVIHRITDRIVRKGSIDN-HGQHWKGADILVFNTYLWWMTGQKMKIL 119
           YW+PFL++S+           R+++  SID    + W GAD+LVFN+  WW+     K+ 
Sbjct: 69  YWSPFLVESD-----NAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWWLHR---KVY 120

Query: 120 KGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSMSPTHAKSIEWGGE 179
            G    +K    EM   +AYR  +++  +WV +N+ P KTRVFF + SP H +  EW   
Sbjct: 121 IGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSPVHFEGGEWN-- 178

Query: 180 PGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVF--GNSKFPITFLNITQLSSYRKDAHT 237
            G +CY ET P+             ++ ++ EV      K P+  L+IT LS YRKD H 
Sbjct: 179 TGGSCY-ETEPLL--GSEYKGLTPEMIDIVNEVLSRAAMKTPVKLLDITLLSQYRKDGHP 235

Query: 238 SIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKL 281
           S+Y+K   P             DC HWCLPG+ DTWNELL   L
Sbjct: 236 SVYRKPGPPK---------KEQDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 284
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.06
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=4e-96  Score=694.78  Aligned_cols=271  Identities=41%  Similarity=0.734  Sum_probs=235.9

Q ss_pred             CcccccCCceEEEeccccchhHHHHhhhhhccccCCcceeeeeCceEEEEEeccceEEEEEeccccccccCCCccccccc
Q 023323            1 MLETLRGKRMMFVGDSLNRGQYISMVCLLHRLVPENAKSMETFDSLTVFTAKDYNTTIEFYWAPFLLKSNADNAVIHRIT   80 (284)
Q Consensus         1 fL~~~RgK~i~FVGDSl~RNq~eSLlClL~~~~p~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLV~~~~~~~~~~~~~   80 (284)
                      |||+|||||||||||||+|||||||+|||++++|...+.....++..+|+|++||+||+||||||||+.++++      .
T Consensus       114 fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~  187 (387)
T PLN02629        114 FLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------G  187 (387)
T ss_pred             HHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------C
Confidence            8999999999999999999999999999999998766555555678899999999999999999999987543      2


Q ss_pred             ceeeecCcccccccCCCCccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcce
Q 023323           81 DRIVRKGSIDNHGQHWKGADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTR  160 (284)
Q Consensus        81 ~~~l~ld~~~~~~~~w~~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~  160 (284)
                      .++|++|.+|++++.|.++|||||||||||+++.. ...++++++++.++++|++.+||++||+||++||++++++.+++
T Consensus       188 ~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~-~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~  266 (387)
T PLN02629        188 KRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGS-LQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTR  266 (387)
T ss_pred             ceeEEecCcchhhhhhccCCEEEEeCccccCCCCe-eEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcE
Confidence            34799999998899999999999999999998863 34467788888899999999999999999999999999988999


Q ss_pred             EEEEecCCCCCCCCCCCCC---CCCCCCCCCccCCCCCCCCCCCcHHHHHHHHHHhcCCCcceEEeeccccccccccCCC
Q 023323          161 VFFTSMSPTHAKSIEWGGE---PGKNCYNETTPIEDPNYWGSDCDKRIMQVIGEVFGNSKFPITFLNITQLSSYRKDAHT  237 (284)
Q Consensus       161 vf~Rt~sP~Hf~~g~W~~~---~gg~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdiT~ls~~R~DgHp  237 (284)
                      |||||+||+|||||+||++   .+|+|+++|+|+.++++.+  .....+++++++.++++.+|+|||||+||++||||||
T Consensus       267 vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~--~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHP  344 (387)
T PLN02629        267 VFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPG--AYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHP  344 (387)
T ss_pred             EEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccC--cchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCc
Confidence            9999999999999999982   2357989999998766542  2344566888999888999999999999999999999


Q ss_pred             ccccCcCCCCCccccCCCCCCCCcccccCCCchHHHHHHHHHhhcC
Q 023323          238 SIYKKQWNPLSPEQVANPVSYADCTHWCLPGLQDTWNELLFTKLFY  283 (284)
Q Consensus       238 ~~y~~~~~~~~~~~~~~~~~~~DC~HWCLPGv~D~WNelL~~~L~~  283 (284)
                      |+|+.   +.++++++++..++||+||||||||||||||||++|++
T Consensus       345 s~Y~~---~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        345 SIYSG---DLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             ccccC---CCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence            99973   23344556666789999999999999999999999974



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 44/291 (15%), Positives = 88/291 (30%), Gaps = 81/291 (27%)

Query: 1   MLETLRGKRMMFVGDSLN--RGQYISMVCLLHRLVPENAKS-------METFD------- 44
           +L T R K+   V D L+     +IS+      L P+  KS           D       
Sbjct: 268 ILLTTRFKQ---VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 45  ----SLTVFTA--KDYNTTIEFYWAPFLLKSNADNAVIHRITDRIVRKGSIDNHGQHWKG 98
                L++     +D   T + +        N D   +  I +  +       + + +  
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNW-----KHVNCDK--LTTIIESSLNVLEPAEYRKMFD- 376

Query: 99  ADILVF--NTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSML-RWVK---- 151
             + VF  +     +    + ++   + D  K  V +      ++   S++ +  K    
Sbjct: 377 -RLSVFPPSA---HIPTILLSLI---WFDVIKSDVMVVVN---KLHKYSLVEKQPKESTI 426

Query: 152 ----LNMDPKKTRVFFTSMSPTHAKSIEWGGEPGKNCYNETTPIEDPNYWGSDCDKRIMQ 207
               + ++ K       ++   H   ++    P     ++  P     Y+          
Sbjct: 427 SIPSIYLELKVKLENEYAL---HRSIVDHYNIPKTFDSDDLIPPYLDQYF--------YS 475

Query: 208 VIG---------EVFGNSKFPITFLNITQLSSYRKDAHTSIYKKQWNPLSP 249
            IG         E    + F + FL+   L   +K  H S     WN    
Sbjct: 476 HIGHHLKNIEHPERM--TLFRMVFLDFRFLE--QKIRHDST---AWNASGS 519


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 80.95
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
Probab=80.95  E-value=0.64  Score=37.29  Aligned_cols=49  Identities=6%  Similarity=0.035  Sum_probs=30.6

Q ss_pred             CccEEEEecccccccCcccccccccccccccccccCChHHHHHHHHHHHHHHHHhhCCCCcceEEEEec-CCC
Q 023323           98 GADILVFNTYLWWMTGQKMKILKGSFDDEKKEIVEMPTENAYRMVMKSMLRWVKLNMDPKKTRVFFTSM-SPT  169 (284)
Q Consensus        98 ~~DvlV~ntGhWw~~~~~~~~~~g~~~~~~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vf~Rt~-sP~  169 (284)
                      ..|++||..|.-=.       ..+            ...+.|+..++.+++.+.+.    ...|++-++ .|.
T Consensus        66 ~pd~vvi~~G~ND~-------~~~------------~~~~~~~~~~~~~i~~~~~~----~~~vvl~~~~~p~  115 (185)
T 3hp4_A           66 EPTHVLIELGANDG-------LRG------------FPVKKMQTNLTALVKKSQAA----NAMTALMEIYIPP  115 (185)
T ss_dssp             CCSEEEEECCHHHH-------HTT------------CCHHHHHHHHHHHHHHHHHT----TCEEEEECCCCCS
T ss_pred             CCCEEEEEeecccC-------CCC------------cCHHHHHHHHHHHHHHHHHc----CCeEEEEeCCCCC
Confidence            67999999885210       000            12577899999999888663    345555443 444




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query284
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.62
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 91.48
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 89.62
d1pvva2163 Ornithine transcarbamoylase {Archaeon Pyrococcus f 87.52
d1otha2170 Ornithine transcarbamoylase {Human (Homo sapiens) 84.63
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]
Probab=96.62  E-value=0.0034  Score=50.61  Aligned_cols=15  Identities=20%  Similarity=0.255  Sum_probs=13.5

Q ss_pred             ccCCceEEEeccccc
Q 023323            5 LRGKRMMFVGDSLNR   19 (284)
Q Consensus         5 ~RgK~i~FVGDSl~R   19 (284)
                      ++||+|.++|||++-
T Consensus         1 ~~~~ti~~~GDS~~~   15 (208)
T d2o14a2           1 VTNRTIYVGGDSTVC   15 (208)
T ss_dssp             CCCCEEEEEECTTTS
T ss_pred             CCCCEEEEEEccccc
Confidence            589999999999884



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure