Citrus Sinensis ID: 023413

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEccc
Coil and Loop (DISEMBL)
mvsfkefwTKKTLLGLGLGQFLSLLITstgfssselarkginaptsqsfFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFsdvhagdrgsgssprkgDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Flexible Loop (DISEMBL)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSdvhagdrgsgssprkGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Low Complexity Region (SEG)
MVSFKEFWTKKTllglglgqflsllITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKItgvvvcvaglvtvIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Disordered region (IsUnstruct)
***FKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA************DALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVC**
Disordered Region (DISOPRED)
*VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA***GSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Disordered Region (DISEMBL)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA***********GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Disordered Region (DISPRO)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q8IXU6	374	Solute carrier family 35	yes	no	0.939	0.708	0.450	2e-60
Q5T1Q4	408	Solute carrier family 35	no	no	0.971	0.671	0.414	2e-60
Q8BGK5	408	Solute carrier family 35	yes	no	0.971	0.671	0.418	6e-60
Q7TML3	375	Solute carrier family 35	no	no	0.936	0.704	0.444	1e-58
Q0V9U2	391	Solute carrier family 35	no	no	0.971	0.700	0.377	2e-53
O59785	505	Uncharacterized solute ca	yes	no	0.936	0.522	0.400	2e-45

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/273 (45%), Positives = 177/273 (64%), Gaps = 8/273 (2%)

Query: 6   EFWTKKTLLGLGLGQFLSLLITSTGFSSSELA-RKGINAPTSQSFFNYVLLAIVYGSLML 64
           + +T   L  + LGQ LSL I  T  +S  LA R  +N P  QSF NY LL ++Y  ++ 
Sbjct: 33  KLFTWNILKTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLA 92

Query: 65  YRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT 118
           +R         LK KW+ Y++LGL DVE N+++V+AYQYT+LTSV LLDC+ IP +M L+
Sbjct: 93  FRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALS 152

Query: 119 WIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVS 177
           W  L  +YR      V VC+ G+ T++ +D+ AG +  SGS    GD LV+ GA+LYA+S
Sbjct: 153 WFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAIS 212

Query: 178 NVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAM 237
           NV EE++VKK  R E +  +GLFG IIS +Q+ I+E K++ SIHW    AL F  +AL M
Sbjct: 213 NVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCM 272

Query: 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLI 270
           F  YSF+P+++K   AT +NL +LT+D++++ +
Sbjct: 273 FCLYSFMPLVIKVTSATSVNLGILTADLYSLFV 305

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  232 bits (591), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 117/282 (41%), Positives = 181/282 (64%), Gaps = 8/282 (2%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++   ++ L+ + LGQ LSLLI   G +S  L+     N P  QSF NY+LL +VY + +
Sbjct: 53  RKVLNREMLISVALGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTL 112

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        L+ +W+ Y+ILGLID+E N+LVVKAYQYT+LTS+ LLDC+ IP V+ L
Sbjct: 113 AVRQGEENLLAILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILL 172

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W FL  +Y+     G+VVC+ G+  ++ +DV  G  +G+G +   GD LV+ GATLY +
Sbjct: 173 SWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGI 232

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE++++   R+E +  +GLFG   S +Q++I+E KEL  + W     L + G++  
Sbjct: 233 SNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSAC 292

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278
           MF  YSF+P+++K   AT +NLSLLT+D++++   +  +H K
Sbjct: 293 MFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYK 334

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  231 bits (588), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/282 (41%), Positives = 180/282 (63%), Gaps = 8/282 (2%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++   ++ L+ + LGQ LSLL+   G +S  LA     N P  QSF NY+LL +VY + +
Sbjct: 53  RKVLNREMLISVALGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTL 112

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        L+ +W+ Y+ILGLID+E N+LVVKAYQYT+LTSV LLDC+ IP V+ L
Sbjct: 113 AVRQGEENLLAILRRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILL 172

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W FL  +Y+     G+VVC+ G+  ++ +DV  G  +G+G +   GD LV+ GATLY +
Sbjct: 173 SWFFLLIRYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGI 232

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE +++   R+E +  +GLFG   S +Q++I+E KEL  + W     L + G++  
Sbjct: 233 SNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSAC 292

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278
           MF  YSF+P+++K   AT +NLSLLT+D++++   +  +H K
Sbjct: 293 MFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYK 334

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/272 (44%), Positives = 176/272 (64%), Gaps = 8/272 (2%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           ++ +T   L  + LGQ LSL I  T  +S  LA K  +N P  QSF NY LL +VY  ++
Sbjct: 32  RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query: 64  LYRR------QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
            ++       + L+ KW+ Y +LGL DVE N+L+V+AYQYT+LTSV LLDC+ IP +M L
Sbjct: 92  AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAV 176
           +W  L+ +Y+      V VC+ G+ T++ +D+ AG +  SGS    GD LV+ GA+LYAV
Sbjct: 152 SWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAV 211

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SNV EE++VKK  R E +  +GLFG IIS +Q+ I+E K++  I W    AL F  +AL 
Sbjct: 212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALC 271

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAV 268
           MF  YSF+P+++K   AT +NL +LT+D++++
Sbjct: 272 MFCLYSFMPLVIKVTSATSVNLGILTADLYSL 303

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  209 bits (531), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 170/286 (59%), Gaps = 12/286 (4%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLM 63
           +  ++++ LL + LGQ LSLLI     +S  L+     N P  QSF NY+LL +VY + +
Sbjct: 32  RNVFSREMLLSVALGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTL 91

Query: 64  LYRRQP------LKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             R+        LK +W+ Y+ LG+ID+E  +LVVKA+QYT+  S+ LL+C+ IP V+ L
Sbjct: 92  AVRQGEENLLAILKRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILL 151

Query: 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV-----HAGDRGSGSSPRKGDALVIAGAT 172
           +W FL  +Y+     G + C+ G+  +  +DV       GD   G S   GD LV+ GAT
Sbjct: 152 SWFFLLVRYKVLHFIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGAT 211

Query: 173 LYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFG 232
           LY +S+V +E++V+   R+EL+  +GLFG   S +Q++I+E KEL  + W     L + G
Sbjct: 212 LYGISSVCQEYIVRNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVG 271

Query: 233 YALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278
           +   MF  YSF+P+++K   AT +NLS+LT++++     +  +H K
Sbjct: 272 FTACMFGLYSFMPVVIKKTSATAINLSMLTAELYTFFCGLFLFHYK 317

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  182 bits (463), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 18/282 (6%)

Query: 5   KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGI-NAPTSQSFFNYVLLAIVYGSLM 63
           K FW     +   LGQ LSL IT+T   +  ++  GI N P  Q+F  Y LL +VY    
Sbjct: 139 KRFW-----IVFFLGQVLSLCITATNTFNGYMS--GISNIPAFQTFLVYALLTLVYTPYT 191

Query: 64  LYR-------RQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMF 116
           ++R           +  W Y +I    DVEGN+ VV AYQYT++ S  LLD W    V+ 
Sbjct: 192 VFRMGFKKYFEMIFRHGWKY-IIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVI 250

Query: 117 LTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAV 176
           L++IFLK +Y + +I GVV C+ GLV ++ SDV +    S  +P  GD  +I GAT Y V
Sbjct: 251 LSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMIIGATCYGV 310

Query: 177 SNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236
           SN  EE+   K     ++  L L+G IIS +Q  I +R  L ++HW++       G+ L 
Sbjct: 311 SNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGYLAGFILV 370

Query: 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIG--AYH 276
           MFL YS  PIL + + AT  N+SLLTSD W+++I I    YH
Sbjct: 371 MFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYH 412

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
255579398	398	conserved hypothetical protein [Ricinus	0.985	0.698	0.827	1e-134
388515617	346	unknown [Lotus japonicus]	0.985	0.803	0.802	1e-133
388521913	346	unknown [Lotus japonicus]	0.985	0.803	0.798	1e-133
357501455	344	Solute carrier family 35 member F1 [Medi	0.989	0.811	0.802	1e-132
356534508	329	PREDICTED: solute carrier family 35 memb	0.989	0.848	0.813	1e-131
356569103	346	PREDICTED: solute carrier family 35 memb	1.0	0.815	0.804	1e-131
363807970	343	uncharacterized protein LOC100805326 [Gl	0.982	0.807	0.812	1e-130
255645683	346	unknown [Glycine max]	1.0	0.815	0.801	1e-130
224065016	307	predicted protein [Populus trichocarpa]	1.0	0.918	0.819	1e-128
224131572	306	predicted protein [Populus trichocarpa]	0.989	0.911	0.825	1e-127

>gi|255579398|ref|XP_002530543.1| conserved hypothetical protein [Ricinus communis] gi|223529905|gb|EEF31834.1| conserved hypothetical protein [Ricinus communis]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/278 (82%), Positives = 257/278 (92%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           ++FKEF TKKTL+GL LGQFLSLLIT+TGF+SSEL++KGINAPTSQSF NYVLLAIVYG 
Sbjct: 26  MTFKEFCTKKTLIGLALGQFLSLLITATGFTSSELSKKGINAPTSQSFLNYVLLAIVYGG 85

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           +MLYR+Q LKAKWYYY+ILGL+DVE NFLVVKAYQYTS+TSVMLLDCW+IP VM LTWIF
Sbjct: 86  VMLYRKQKLKAKWYYYVILGLVDVEANFLVVKAYQYTSITSVMLLDCWSIPSVMLLTWIF 145

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           L TKYR+KKI GVVVCVAGLV ++FSDVH+ DR +GS+PRKGDALVIAGATLYAVSNVSE
Sbjct: 146 LHTKYRFKKIAGVVVCVAGLVMIVFSDVHSADRSAGSNPRKGDALVIAGATLYAVSNVSE 205

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFLVK ADRIELM+ LG FG I+SA+QISILER EL+SI WSAGAALPFFG+ALAMFLFY
Sbjct: 206 EFLVKNADRIELMSLLGFFGAIVSAIQISILERSELKSIQWSAGAALPFFGFALAMFLFY 265

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           SFVP+LLK NG+TMLNLSLLTSDMWAVLIRI AYH+KV
Sbjct: 266 SFVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHDKV 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515617|gb|AFK45870.1| unknown [Lotus japonicus]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 223/278 (80%), Positives = 256/278 (92%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           + F++FWT+  L+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L IVYGS
Sbjct: 3   MDFRKFWTRNMLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLVIVYGS 62

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           ++LYRR+PLKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWIF
Sbjct: 63  ILLYRRKPLKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWIF 122

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           LKTKYR+ KITGV+VC+AGLV V+FSDVHAGDR  GS+PRKGD +V AGATLYA+SNVSE
Sbjct: 123 LKTKYRFLKITGVIVCIAGLVLVVFSDVHAGDRAGGSNPRKGDTIVFAGATLYAISNVSE 182

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFL+K ADR+ELM  LGLFGGI+SA+QIS+LER EL+SIHWSAGAALPF G+++AMF+FY
Sbjct: 183 EFLIKNADRVELMGMLGLFGGIVSAIQISVLERNELKSIHWSAGAALPFVGFSVAMFMFY 242

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           S VP+LLK NG+TMLNLSLLTSDMWAV+IRI AYHEKV
Sbjct: 243 SLVPVLLKINGSTMLNLSLLTSDMWAVVIRIFAYHEKV 280

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521913|gb|AFK49018.1| unknown [Lotus japonicus]

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/278 (79%), Positives = 256/278 (92%)

Query: 2   VSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGS 61
           + F++FWT+  L+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L IVYGS
Sbjct: 3   MDFRKFWTRNMLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLVIVYGS 62

Query: 62  LMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF 121
           ++LYRR+PLKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWIF
Sbjct: 63  ILLYRRKPLKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWIF 122

Query: 122 LKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSE 181
           LKTKYR+ KITGV+VC+AGLV V+FSD+HAGDR  GS+PRKGDA+V AGATLYA+SNVSE
Sbjct: 123 LKTKYRFLKITGVIVCIAGLVLVVFSDIHAGDRAGGSNPRKGDAIVFAGATLYAISNVSE 182

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFL+K ADR+ELM  LGLFGGI+SA+QIS+LER EL+SIHWSAGAALPF G+++AMF+FY
Sbjct: 183 EFLIKNADRVELMGMLGLFGGIVSAIQISVLERNELKSIHWSAGAALPFVGFSVAMFMFY 242

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           S VP+LLK NG+TMLNL LLTSDMWAV+IRI AYHEKV
Sbjct: 243 SLVPVLLKINGSTMLNLPLLTSDMWAVVIRIFAYHEKV 280

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501455|ref|XP_003621016.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355496031|gb|AES77234.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/279 (80%), Positives = 256/279 (91%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           ++  K++WTK TL+GL LGQFLSLLIT+TGF+SS+LA+KGINAPTSQSF NYV L I+YG
Sbjct: 2   IIDIKKYWTKNTLIGLALGQFLSLLITATGFASSDLAKKGINAPTSQSFLNYVFLMIIYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+PLKAKWYYY++LGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM LTWI
Sbjct: 62  TILLYRRKPLKAKWYYYILLGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLLTWI 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGV+VC+AGLV V+FSDVHAGDR  GS+PR GD LVIAGATLYA SNVS
Sbjct: 122 FLKTKYRFKKITGVIVCIAGLVLVVFSDVHAGDRAGGSNPRLGDVLVIAGATLYAFSNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR ELMA LGLFGGIISA+QI+ILER EL+SIHWSAGAA PFFG+++AMFLF
Sbjct: 182 EEFLVKNADREELMAMLGLFGGIISAIQIAILERNELKSIHWSAGAAFPFFGFSVAMFLF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           YS VP+LLK NG+TMLNLSLLTSDMW+VLIRI AYHEKV
Sbjct: 242 YSLVPVLLKLNGSTMLNLSLLTSDMWSVLIRIFAYHEKV 280

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534508|ref|XP_003535795.1| PREDICTED: solute carrier family 35 member F1-like [Glycine max]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/279 (81%), Positives = 254/279 (91%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M +F++FW++KTLLGL LGQFLSLLITSTGF+SS LA+KGINAPTSQSF NYV LAIVYG
Sbjct: 1   MATFEQFWSRKTLLGLALGQFLSLLITSTGFTSSLLAKKGINAPTSQSFLNYVFLAIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
            ++LYRR+ LKAKWYYY++LGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IPCVM  TWI
Sbjct: 61  IIVLYRREALKAKWYYYILLGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPCVMLFTWI 120

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKY +KK+TGVVVC+AGLV V+FSDVHAGDR  GS+P  GD LVIAGATLYAVSNVS
Sbjct: 121 FLKTKYGFKKVTGVVVCIAGLVLVVFSDVHAGDRAGGSNPSIGDILVIAGATLYAVSNVS 180

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGLFGGIISA+QISILER EL+SIHWSAGA LPF G+A+AMF+F
Sbjct: 181 EEFLVKNADRVELMAMLGLFGGIISAIQISILERNELKSIHWSAGAVLPFVGFAVAMFMF 240

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           YS VP+LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKV
Sbjct: 241 YSLVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKV 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569103|ref|XP_003552745.1| PREDICTED: solute carrier family 35 member F1-like [Glycine max]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/282 (80%), Positives = 254/282 (90%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M  F   WT  TL+GLGLGQFLSLLITSTGF+SS+LA+KGINAPTSQSF NYV L++VYG
Sbjct: 2   MFDFGRIWTPNTLIGLGLGQFLSLLITSTGFTSSQLAKKGINAPTSQSFLNYVFLSLVYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+
Sbjct: 62  TILLYRRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWL 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVS
Sbjct: 122 FLKTKYRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+F
Sbjct: 182 EEFLVKNADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAEAALPFVGFAVAMFMF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM 282
           YS VP+LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKV  M
Sbjct: 242 YSLVPVLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVDWM 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807970|ref|NP_001242713.1| uncharacterized protein LOC100805326 [Glycine max] gi|255639600|gb|ACU20094.1| unknown [Glycine max]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/277 (81%), Positives = 252/277 (90%)

Query: 6   EFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY 65
           + WT+ TL+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV   +VYG+++LY
Sbjct: 4   QIWTRNTLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFSTLVYGTVLLY 63

Query: 66  RRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTK 125
           RR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+FLKTK
Sbjct: 64  RRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWLFLKTK 123

Query: 126 YRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLV 185
           YR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVSEEFLV
Sbjct: 124 YRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVSEEFLV 183

Query: 186 KKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP 245
           K ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+FYS VP
Sbjct: 184 KSADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAKAALPFVGFAVAMFMFYSLVP 243

Query: 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM 282
           +LLK NG+TMLNLSLLTSDMWAVLIRI AYHEKV  M
Sbjct: 244 VLLKINGSTMLNLSLLTSDMWAVLIRIFAYHEKVDWM 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645683|gb|ACU23335.1| unknown [Glycine max]

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/282 (80%), Positives = 252/282 (89%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M  F   WT+ TL+GLGLGQFLSLLITSTGF+SSELA+KGINAPTSQSF NYV L +VYG
Sbjct: 2   MFDFARIWTRNTLIGLGLGQFLSLLITSTGFTSSELAKKGINAPTSQSFLNYVFLTLVYG 61

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           +++LYRR+ LKAKWYYY+ILGL+DVE NFLVVKAYQYTSLTSVMLLDCW+IP VM LTW+
Sbjct: 62  TVLLYRRKALKAKWYYYIILGLVDVEANFLVVKAYQYTSLTSVMLLDCWSIPSVMLLTWL 121

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FLKTKYR+KKITGVVVCVAGLV V+FSDVH+GDR  GS+PRKGD LVIAGATLYA+SNVS
Sbjct: 122 FLKTKYRFKKITGVVVCVAGLVLVVFSDVHSGDRAGGSNPRKGDLLVIAGATLYAISNVS 181

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELMA LGL GGIISA+QISILER EL+SIHWSA AALPF G+A+AMF+F
Sbjct: 182 EEFLVKSADRVELMAMLGLSGGIISAIQISILERNELKSIHWSAEAALPFVGFAVAMFMF 241

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM 282
           YS VP+LLK NG+ MLNL LLTSDMWAVLIRI AYHEKV  M
Sbjct: 242 YSLVPVLLKINGSIMLNLFLLTSDMWAVLIRIFAYHEKVDWM 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065016|ref|XP_002301631.1| predicted protein [Populus trichocarpa] gi|222843357|gb|EEE80904.1| predicted protein [Populus trichocarpa]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/282 (81%), Positives = 254/282 (90%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M+SFKEFWTKKTL+ LGLGQFLSLLITSTGFSSSELAR+GINAPTSQSF NYV LAIVYG
Sbjct: 1   MLSFKEFWTKKTLVALGLGQFLSLLITSTGFSSSELARRGINAPTSQSFLNYVFLAIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120
           S+M YR+Q LKAKWYYY IL L+DVE NFLVVKAYQYTS+TSVMLLDCW+IP VM LTW 
Sbjct: 61  SIMFYRKQALKAKWYYYAILSLVDVEANFLVVKAYQYTSITSVMLLDCWSIPSVMVLTWF 120

Query: 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180
           FL TKYR+KKI GV VCVAGLV V+FSDVH GDR  GS+PRKGDALVIAGATLYA+SNVS
Sbjct: 121 FLSTKYRFKKIAGVAVCVAGLVMVVFSDVHTGDRSGGSNPRKGDALVIAGATLYAISNVS 180

Query: 181 EEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF 240
           EEFLVK ADR+ELM+ LG FG IISA+QISILER E++SIHWSAGAALPFFG+++AMFLF
Sbjct: 181 EEFLVKNADRVELMSLLGFFGAIISAIQISILERNEVKSIHWSAGAALPFFGFSVAMFLF 240

Query: 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM 282
           YS VPILLK +G+TMLNLSLLTSDMWAV+IRI AYHEKV  M
Sbjct: 241 YSLVPILLKISGSTMLNLSLLTSDMWAVVIRIFAYHEKVDWM 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131572|ref|XP_002321120.1| predicted protein [Populus trichocarpa] gi|222861893|gb|EEE99435.1| predicted protein [Populus trichocarpa]

 Score =  458 bits (1179), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/280 (82%), Positives = 254/280 (90%), Gaps = 1/280 (0%)

Query: 1   MVSFKEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG 60
           M+SFKEF T KTL+ LGLGQFLSLLITSTGFSSSELAR+GINAPTSQSF NYV L IVYG
Sbjct: 1   MLSFKEFCTTKTLVALGLGQFLSLLITSTGFSSSELARRGINAPTSQSFLNYVFLVIVYG 60

Query: 61  SLMLYRRQPLKAKWYYYLILGLIDVEGNFL-VVKAYQYTSLTSVMLLDCWTIPCVMFLTW 119
           S+MLYR+Q LKAKWYYY IL L+DVE NFL VVKAYQYTS+TSVMLLDCW+IPCVM LTW
Sbjct: 61  SIMLYRKQALKAKWYYYAILSLVDVEANFLAVVKAYQYTSITSVMLLDCWSIPCVMVLTW 120

Query: 120 IFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNV 179
            FL TKYR+KKI GVVVCVAGLV V+FSDVHAGD+  GS+PRKGDALVIAGATLYA+SNV
Sbjct: 121 FFLSTKYRFKKIAGVVVCVAGLVMVVFSDVHAGDQSGGSNPRKGDALVIAGATLYAISNV 180

Query: 180 SEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL 239
           SEEFLVK ADR+ELM+ LG FG IISA+QISILER E++SIHWSAGAALPFFG+A+AMFL
Sbjct: 181 SEEFLVKNADRVELMSLLGFFGAIISAIQISILERNEVKSIHWSAGAALPFFGFAVAMFL 240

Query: 240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           FYS VPILLK +G+TMLNLSLLTSDMWAV+IRI AYHEKV
Sbjct: 241 FYSLVPILLKISGSTMLNLSLLTSDMWAVMIRIFAYHEKV 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.960	0.813	0.653	3.4e-93
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.982	0.817	0.610	3.3e-86
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.822	0.639	0.656	2.7e-77
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.868	0.587	0.454	2.6e-54
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.868	0.655	0.434	7.2e-52
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.897	0.674	0.417	3.6e-50
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.897	0.620	0.398	7.4e-50
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.897	0.620	0.402	1.2e-49
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.868	0.571	0.424	2.9e-48
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.978	0.691	0.333	2.3e-39

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 177/271 (65%), Positives = 207/271 (76%)

Query:     9 TKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ 68
             TKKT              TS  F+SSELARKGINAPTSQ+F +Y LLA+VYG +MLYRR 
Sbjct:    13 TKKTLIGLGLGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRP 72

Query:    69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRY 128
              +K KWY+Y +L L+DVEGNFLVVKA QYTS+TS+MLLDCW IPCV+ LTW+FLKTKYR 
Sbjct:    73 TIKGKWYHYFLLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRL 132

Query:   129 KKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA 188
              KI             +FSDVHAG R  GS+P KGD LV+AGATLYAVSN +EEFLVK A
Sbjct:   133 MKISGVFICIAGVVMVLFSDVHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNA 192

Query:   189 DRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILL 248
             D +ELM F+GLFG IISA+Q++I E+ EL++IHWSA A  PF  +A+ MFLFYS +PILL
Sbjct:   193 DTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILL 252

Query:   249 KTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
             +TNG+TM  LSLLTSDMWAVLIRI AYHEKV
Sbjct:   253 RTNGSTMFTLSLLTSDMWAVLIRIFAYHEKV 283

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 169/277 (61%), Positives = 201/277 (72%)

Query:     3 SFKEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSL 62
             +F E  TKKT              T     +SE+ARKGI+APTSQ+F  YV LAIVYG +
Sbjct:     5 NFNEMKTKKTLIGLGLGQIISLLSTLIASIASEIARKGISAPTSQTFLGYVSLAIVYGGI 64

Query:    63 MLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL 122
             MLYRR  +K KWY+Y +L ++DVE NFLVVKA+Q TS+TS+MLLDCW IPCV+ LTW+FL
Sbjct:    65 MLYRRSAIKVKWYHYFLLAVVDVEANFLVVKAFQNTSMTSIMLLDCWAIPCVLVLTWVFL 124

Query:   123 KTKYRYKKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEE 182
             KT+YR  KI             +FSDVHAGDR  GS+P KGD LVIAGATLYAVSNV+EE
Sbjct:   125 KTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEE 184

Query:   183 FLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS 242
             FLVK AD  ELMAFLGLFG II+A+QISI ER  +++I WS  A L + G AL +FLFY+
Sbjct:   185 FLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVRAIQWSTEAILLYIGGALGLFLFYT 244

Query:   243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
              + IL+K NG+TM NLSLLTSDMWA+LIR   YHEKV
Sbjct:   245 LITILIKNNGSTMFNLSLLTSDMWAILIRTFGYHEKV 281

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
 Identities = 153/233 (65%), Positives = 172/233 (73%)

Query:     5 KEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLML 64
             KE  TKKT              TS GF+SSELARKGIN PTSQ F NYVLLAIVYGS+ML
Sbjct:     6 KEIRTKKTLIGLGLGQLLSLLATSNGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIML 65

Query:    65 YRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKT 124
             YRR  +KAKWYYY +L  +DVE NFLVVKAYQYTSLTSVMLLDCW IPCV+ LTW +LKT
Sbjct:    66 YRRSDIKAKWYYYFLLAFVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKT 125

Query:   125 KYRYKKIXXXXXXXXXXXXXIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFL 184
             KYR  KI             +FSDVHAGDR  GS+P KGD LV+AGATLYAVSN SEEFL
Sbjct:   126 KYRLMKISGVFICIVGVFMVVFSDVHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFL 185

Query:   185 VKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAM 237
             VK AD +ELM FLG FG IISA+Q+SILER EL++IHWS GA + F   A+++
Sbjct:   186 VKNADTVELMTFLGFFGAIISAIQVSILERDELKAIHWSTGA-VGFLAMAISI 237

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 115/253 (45%), Positives = 165/253 (65%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR----QPLKAKWYYYLIL 80
             I  TG  S  L +K G+N PT+QS  NY+LL  VY  L+L +R    + +K K  Y+  L
Sbjct:    41 IAGTGIFSQLLVKKYGVNIPTTQSLLNYILLC-VY-LLVLVKRGVLWETIKTKSIYFAPL 98

Query:    81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXXXX 140
              L+D+E N++VVKAYQYT++TSVMLLDC+TIPCV+ L+ IFLKT++ +  I         
Sbjct:    99 ALVDLEANYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHIIAVLIALAG 158

Query:   141 XXXXIFSDVHAGDRGSG-SSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGL 199
                 + SD+  G+  +G S+P  GD L +A +  YA+SNV +E  VKK DR+  +A +GL
Sbjct:   159 MAILVVSDIIEGESANGGSNPLLGDFLCLASSVCYAISNVGQEATVKKYDRVTYLAMIGL 218

Query:   200 FGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLS 259
             +G I   +QI+ILER EL ++ WS G      G+AL +F+ YSF P +++  GAT++NLS
Sbjct:   219 YGSIFCGIQIAILERNELATMAWSGGVVGYIVGFALCLFIMYSFTPTMMEIAGATVMNLS 278

Query:   260 LLTSDMWAVLIRI 272
             LLTSDM+ +++ I
Sbjct:   279 LLTSDMFGIIVAI 291

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 110/253 (43%), Positives = 158/253 (62%)

Query:    26 ITSTGFSSSELA-RKGINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             I  T  +S  LA R  +N P  QSF NY LL ++Y  ++ +R         LK KW+ Y+
Sbjct:    53 ICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYI 112

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             +LGL DVE N+++V+AYQYT+LTSV LLDC+ IP +M L+W  L  +YR           
Sbjct:   113 LLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCL 172

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +D+ AG +  SGS    GD LV+ GA+LYA+SNV EE++VKK  R E +  +
Sbjct:   173 LGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMV 232

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG IIS +Q+ I+E K++ SIHW    AL F  +AL MF  YSF+P+++K   AT +N
Sbjct:   233 GLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVN 292

Query:   258 LSLLTSDMWAVLI 270
             L +LT+D++++ +
Sbjct:   293 LGILTADLYSLFV 305

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 109/261 (41%), Positives = 159/261 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYYYL 78
             I  T  +S  LA K  +N P  QSF NY LL +VY  ++ ++       + L+ KW+ Y 
Sbjct:    53 ICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEILRRKWWKYT 112

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             +LGL DVE N+L+V+AYQYT+LTSV LLDC+ IP +M L+W  L+ +Y+           
Sbjct:   113 LLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCL 172

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +D+ AG +  SGS    GD LV+ GA+LYAVSNV EE++VKK  R E +  +
Sbjct:   173 LGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMV 232

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG IIS +Q+ I+E K++  I W    AL F  +AL MF  YSF+P+++K   AT +N
Sbjct:   233 GLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVN 292

Query:   258 LSLLTSDMWAVLIRIGAYHEK 278
             L +LT+D++++   +  +  K
Sbjct:   293 LGILTADLYSLFFGLFLFEYK 313

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 104/261 (39%), Positives = 158/261 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             I   G +S  L+     N P  QSF NY+LL +VY + +  R+        L+ +W+ Y+
Sbjct:    74 ICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYM 133

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             ILGLID+E N+LVVKAYQYT+LTS+ LLDC+ IP V+ L+W FL  +Y+           
Sbjct:   134 ILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCI 193

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +DV  G  +G+G +   GD LV+ GATLY +SNV EE++++   R+E +  +
Sbjct:   194 LGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMI 253

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG   S +Q++I+E KEL  + W     L + G++  MF  YSF+P+++K   AT +N
Sbjct:   254 GLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVN 313

Query:   258 LSLLTSDMWAVLIRIGAYHEK 278
             LSLLT+D++++   +  +H K
Sbjct:   314 LSLLTADLYSLFCGLFLFHYK 334

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 105/261 (40%), Positives = 157/261 (60%)

Query:    26 ITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYL 78
             +   G +S  LA     N P  QSF NY+LL +VY + +  R+        L+ +W+ Y+
Sbjct:    74 VCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYM 133

Query:    79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXX 138
             ILGLID+E N+LVVKAYQYT+LTSV LLDC+ IP V+ L+W FL  +Y+           
Sbjct:   134 ILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCI 193

Query:   139 XXXXXXIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL 197
                   + +DV  G  +G+G +   GD LV+ GATLY +SNV EE +++   R+E +  +
Sbjct:   194 LGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMI 253

Query:   198 GLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLN 257
             GLFG   S +Q++I+E KEL  + W     L + G++  MF  YSF+P+++K   AT +N
Sbjct:   254 GLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVN 313

Query:   258 LSLLTSDMWAVLIRIGAYHEK 278
             LSLLT+D++++   +  +H K
Sbjct:   314 LSLLTADLYSLFCGLFLFHYK 334

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 109/257 (42%), Positives = 156/257 (60%)

Query:    26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQP------LKAKWYYYLI 79
             +  TG SS  L  + +NAP +Q+F NY LL  VY   +  +         L+ + + YLI
Sbjct:    74 LCGTGVSSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDENGLVVVLRKRGWRYLI 133

Query:    80 LGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIXXXXXXXX 139
             L +IDVE N+++VKAYQYT+LTSV LLDC TIP V+FL+W+FL  +Y    I        
Sbjct:   134 LAIIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSVRYLASHILGVTICII 193

Query:   140 XXXXXIFSDVHAGDRGS---GSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAF 196
                  I++D   GD+G+   GS+   GD L +A A +YA+ NV+EEFLVK+  R E +  
Sbjct:   194 GIACVIWADA-LGDKGALDGGSNKVLGDILCLAAAVMYAICNVAEEFLVKQHSRTEYLGM 252

Query:   197 LGLFGGIISAVQISILERKELQSIHWSAGAALPFFG-YALAMFLFYSFVPILLKTNGATM 255
             LGLFG I+S VQ ++ E++ L  I W  G  + +F  +A +MF+FYS V ++L+   A M
Sbjct:   253 LGLFGCIVSGVQTAVFEQEALSKIVWD-GTIVSYFALFAFSMFIFYSLVTVVLQKTSALM 311

Query:   256 LNLSLLTSDMWAVLIRI 272
              NLS LT+D +++L  I
Sbjct:   312 FNLSTLTADFYSLLFGI 328

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 95/285 (33%), Positives = 143/285 (50%)

Query:     4 FKEFWTKKTXXXXXXXXXXXXXITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLM 63
             F  F TK+               T T   ++ LA K  N P  Q+FFNY LL I++ S  
Sbjct:    52 FAYFRTKEFYVTLLLGQFLAIANTGTNTFNTLLANKNTNIPAFQTFFNYSLLNIIFTSYT 111

Query:    64 LYRR------QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117
             +Y+       + L  + + Y+IL   DVEGN+ +V AY+YT++ S  L++ W I  V+ +
Sbjct:   112 IYKYGIKGWFEMLWKRGWKYIILSFCDVEGNYFMVLAYEYTTMMSAQLINFWAIVVVVVV 171

Query:   118 TWIFLKTKYRYKKIXXXXXXXXXXXXXIFSDVHAGDRG---SGSSPRKGDALVIAGATLY 174
             +++FL+ +Y   ++             I SD   G  G   S  +  KGD   + GA+ Y
Sbjct:   172 SFLFLRVRYHISQVLGILICIGGMGILIASDHIQGTNGGDISRGNQIKGDLFALLGASFY 231

Query:   175 AVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYA 234
              ++N  EEF V  A   E++  +G FG II+ VQ +I +RK +Q  HW         GY 
Sbjct:   232 GLANTGEEFFVSTAPVYEVIGQMGFFGMIINGVQAAIFDRKSIQHAHWDGQVGGYLTGYT 291

Query:   235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
             L + +FYS  P+L +   A   N+SLLT + W V+I I  +H  V
Sbjct:   292 LCLSIFYSTAPLLFRLASAAFFNISLLTMNFWGVIIGIRVFHYSV 336

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	1e-136

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  388 bits (998), Expect = e-136
 Identities = 163/278 (58%), Positives = 196/278 (70%), Gaps = 7/278 (2%)

Query: 9   TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR- 67
           TK+TL+GL LGQ LSL IT T  +S  LA KG+NAP  Q+F NY LL +VY  ++ +RR 
Sbjct: 9   TKRTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRG 68

Query: 68  -----QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL 122
                  +K KW+ Y+IL LIDVE N+LVVKAYQYT+LTSV LLDCW IP V+ L+W FL
Sbjct: 69  EKNLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFL 128

Query: 123 KTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG-SGSSPRKGDALVIAGATLYAVSNVSE 181
           K +YR   I GVV+C+ G+V V+ SDV AG R   GS+P  GD LV+AGATLYAVSNV+E
Sbjct: 129 KVRYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTE 188

Query: 182 EFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241
           EFLVKK  R E +  LGLFG IIS +Q +I ERK L  IHW     L F G+AL MFL Y
Sbjct: 189 EFLVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLY 248

Query: 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKV 279
           S +PIL+K   ATM NLSLLTSD W++LI I  +H KV
Sbjct: 249 SLMPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKV 286

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
KOG2766	336	consensus Predicted membrane protein [Function unk	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.94
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.88
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.82
COG2962	293	RarD Predicted permeases [General function predict	99.82
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.8
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.75
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.66
KOG2765	416	consensus Predicted membrane protein [Function unk	99.66
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.64
COG2510	140	Predicted membrane protein [Function unknown]	99.61
KOG1581	327	consensus UDP-galactose transporter related protei	99.51
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.35
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.3
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.27
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.24
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.2
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.16
KOG1580	337	consensus UDP-galactose transporter related protei	99.12
PRK11272	292	putative DMT superfamily transporter inner membran	99.05
PLN00411	358	nodulin MtN21 family protein; Provisional	99.02
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.01
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.99
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.96
PRK11689	295	aromatic amino acid exporter; Provisional	98.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.87
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.87
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.87
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.82
KOG1582	367	consensus UDP-galactose transporter related protei	98.81
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.79
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.77
PRK13499	345	rhamnose-proton symporter; Provisional	98.76
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.67
PRK15430	296	putative chloramphenical resistance permease RarD;	98.66
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.62
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.61
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.57
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.57
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.56
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.55
COG2510	140	Predicted membrane protein [Function unknown]	98.5
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.43
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.42
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.34
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.21
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.14
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.06
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.99
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.81
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.63
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.54
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.54
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.52
PRK11431	105	multidrug efflux system protein; Provisional	97.49
COG2076	106	EmrE Membrane transporters of cations and cationic	97.49
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.47
COG2962	293	RarD Predicted permeases [General function predict	97.42
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.36
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.34
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.3
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.01
KOG1581	327	consensus UDP-galactose transporter related protei	96.92
KOG1580	337	consensus UDP-galactose transporter related protei	96.43
KOG2765	416	consensus Predicted membrane protein [Function unk	96.35
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.34
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.02
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.99
PF13536	113	EmrE: Multidrug resistance efflux transporter	95.8
PRK13499	345	rhamnose-proton symporter; Provisional	95.51
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.27
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.77
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	94.51
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.01
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.06
KOG1443	349	consensus Predicted integral membrane protein [Fun	92.91
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.67
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	92.06
KOG1582	367	consensus UDP-galactose transporter related protei	91.39
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	91.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	90.5
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	90.36
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	88.79
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	88.65
COG1742	109	Uncharacterized conserved protein [Function unknow	87.84
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	87.7
PRK02237	109	hypothetical protein; Provisional	87.51
KOG4831	125	consensus Unnamed protein [Function unknown]	85.77

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=2.4e-33  Score=239.94  Aligned_cols=280  Identities=56%  Similarity=0.891  Sum_probs=254.7

Q ss_pred             chhhh-hhHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc------CCcchhH
Q 023413            3 SFKEF-WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ------PLKAKWY   75 (282)
Q Consensus         3 ~~~~~-~~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~~~~~~~   75 (282)
                      +.|++ ++||.+++++++..+++|-+.++..++++.++|...|...++..|....+++.+...+|+.      ..+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w   80 (334)
T PF06027_consen    1 RFKSFLFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWW   80 (334)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHH
Confidence            45775 8999999999999999999999999999999988889999999999999888887766642      3468899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCC-
Q 023413           76 YYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDR-  154 (282)
Q Consensus        76 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~-  154 (282)
                      ++++.+++...+|++...|++|++.+.++++..+..+++++++++++|||.++.|++|+.+++.|+.++...|..++++ 
T Consensus        81 ~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~  160 (334)
T PF06027_consen   81 KYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDS  160 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998876554333 


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHH
Q 023413          155 GSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYA  234 (282)
Q Consensus       155 ~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
                      ..+.++.+|+++++.++++||++++..|+..++.|+.+..+...+.+.++..+.....|..+++..+|+......+.+..
T Consensus       161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~  240 (334)
T PF06027_consen  161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA  240 (334)
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH
Confidence            24567789999999999999999999999999999999999999999999988888889888888889888777888888


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccCC
Q 023413          235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM  282 (282)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~~  282 (282)
                      ++.+.+|.......+..++...++...+..+.+++++++++||+++|+
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l  288 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL  288 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH
Confidence            888899999999999999999999999999999999999999999873

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.97  E-value=1.3e-27  Score=205.07  Aligned_cols=262  Identities=16%  Similarity=0.104  Sum_probs=196.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc--cCCcchhHHHHHHHHHHH
Q 023413            8 WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDV   85 (282)
Q Consensus         8 ~~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~   85 (282)
                      +.||..--+.......++|+.++...|...+  +.+|...+++|+..+.++++++...++  ++++++++.....|.++.
T Consensus         2 ~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~   79 (292)
T PRK11272          2 RFRQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLL   79 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence            4455555556677888999999999998774  678999999999999999888876554  234566777778888765


Q ss_pred             HH-HHHHHHHh-hccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchh
Q 023413           86 EG-NFLVVKAY-QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKG  163 (282)
Q Consensus        86 ~~-~~~~~~al-~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G  163 (282)
                      .. +.+++.+. ++++++.++++.++.|+++.+++.+ +|||+++++++|+.+++.|+.++..++..      + ....|
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~------~-~~~~G  151 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL------S-GNPWG  151 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc------c-cchHH
Confidence            55 67777888 9999999999999999999999985 79999999999999999999988643211      1 23479


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHH
Q 023413          164 DALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF  243 (282)
Q Consensus       164 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (282)
                      ++++++++++||.|++..||..++ ++...+.+++..+...+.+.....+.......+.+.+....+.+...+. ..+..
T Consensus       152 ~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~-~~~~l  229 (292)
T PRK11272        152 AILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSI-IAISA  229 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHH-HHHHH
Confidence            999999999999999999986543 4455667788888777766543332221111122333333444432222 22244


Q ss_pred             HHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          244 VPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       244 ~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +.+..++.++...+...++||+++++++++++||++++
T Consensus       230 ~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~  267 (292)
T PRK11272        230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP  267 (292)
T ss_pred             HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence            55567888889999999999999999999999999985

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=1.2e-26  Score=199.44  Aligned_cols=258  Identities=13%  Similarity=0.064  Sum_probs=183.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH-HHHHH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVV   92 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~   92 (282)
                      +++.++....++|+.+....|...  ++.+|....++|+..+.+++.++.. + ++.++++++....+.++... +.+++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~   79 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTVG-F-PRLRQFPKRYLLAGGLLFVSYEICLA   79 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHcc-c-cccccccHHHHHHHhHHHHHHHHHHH
Confidence            445678889999999999999866  4688999999999999988887642 2 22233334445556555555 55566


Q ss_pred             HHhh----ccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCC---CCCCCcchhHH
Q 023413           93 KAYQ----YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDR---GSGSSPRKGDA  165 (282)
Q Consensus        93 ~al~----~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~---~~~~~~~~G~~  165 (282)
                      .+++    +.++++++++.++.|+++.+++++++|||++++++.|+.+++.|++++..++...+..   ....+...|+.
T Consensus        80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~  159 (295)
T PRK11689         80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG  159 (295)
T ss_pred             HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence            6665    4678889999999999999999999999999999999999999999998754311100   01112346999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q 023413          166 LVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP  245 (282)
Q Consensus       166 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (282)
                      +++++++|||.|++..||..++.|+.....   ..+...+.+.. ..++.+..+.+++.+..+.+.+.  +....|..+.
T Consensus       160 ~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~~~--~t~~~~~l~~  233 (295)
T PRK11689        160 LAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKY-FLSPQPAMVFSLPAIIKLLLAAA--AMGFGYAAWN  233 (295)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHH-HHhcCccccCCHHHHHHHHHHHH--HHHHHHHHHH
Confidence            999999999999999999887777765432   22223332322 22222112223333333334332  2333446667


Q ss_pred             HHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +..++.++...+...+++|+++++++++++||++++
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~  269 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF  269 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence            788888999999999999999999999999999985

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=2.5e-26  Score=200.73  Aligned_cols=270  Identities=14%  Similarity=0.142  Sum_probs=202.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---cC---CcchhHHHHHHH
Q 023413            8 WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QP---LKAKWYYYLILG   81 (282)
Q Consensus         8 ~~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~---~~~~~~~~~~~g   81 (282)
                      +|| ..+.+..++..-++.+....++|...+.| .+|....++|+.++++++.++.+.++   ++   .++++..+.+.|
T Consensus         8 ~~~-~~~~~~~~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          8 WRR-EAVFLTAMLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhh-ccchHHHHHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence            455 44777888889999999999999999755 56789999999999999998876432   11   234556677788


Q ss_pred             HHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHH------hhcccchhhhhhHHHhhhcceeeEeecCCCC---
Q 023413           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF------LKTKYRYKKITGVVVCVAGLVTVIFSDVHAG---  152 (282)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~------l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~---  152 (282)
                      .++...+.+++.|++|+++++++++.++.|+++.++++++      +|||+++++++|+++++.|+.++..+++...   
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            8874336678899999999999999999999999999999      6999999999999999999998875332110   


Q ss_pred             --------------CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccChh-HHHHHHHHHHHHHHHHHHHHHhhccc
Q 023413          153 --------------DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRI-ELMAFLGLFGGIISAVQISILERKEL  217 (282)
Q Consensus       153 --------------~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (282)
                                    +.....+...|+.++++++++||+|++++||..+++++. ..++++..++.....+.....+..+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence                          000111124599999999999999999999988887654 56667777777766555555443221


Q ss_pred             cc--cccccch-hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          218 QS--IHWSAGA-ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       218 ~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..  ..++... .+++.+.. +. ..|..+.+..++.++...+...+++|+++++++++++||++++
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~-t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~  310 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAII-TS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL  310 (358)
T ss_pred             ccceeccchHHHHHHHHHHH-HH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcH
Confidence            11  1122221 13333332 32 3446778888999999999999999999999999999999986

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.96  E-value=1.4e-26  Score=195.79  Aligned_cols=243  Identities=18%  Similarity=0.152  Sum_probs=186.8

Q ss_pred             HHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH-HHHHHHHhhccchhhHh
Q 023413           26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAYQYTSLTSVM  104 (282)
Q Consensus        26 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~  104 (282)
                      |+.++...|...+ +..|+....+.|...+.+.+.+...++  +++++++++...|.++... +.+++.|++++++++++
T Consensus         1 Wg~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         1 WGTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             CcchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            6778888888665 467888999999999888887765544  4566777888888887777 77888999999999999


Q ss_pred             hhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHh
Q 023413          105 LLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFL  184 (282)
Q Consensus       105 ~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~  184 (282)
                      ++.++.|+++.+++.+++|||+++++++|+.+++.|+.++..++..       ..+..|+.+++.++++|+.+++..|+.
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~-------~~~~~G~~~~l~a~~~~a~~~~~~k~~  150 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL-------SINPAGLLLGLGSGISFALGTVLYKRL  150 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc-------cccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            9999999999999999999999999999999999999998753311       233689999999999999999999998


Q ss_pred             hcccCh--hHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHH
Q 023413          185 VKKADR--IELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLT  262 (282)
Q Consensus       185 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  262 (282)
                      .++.|+  .....+.+..+.+...+.....+..  ...+...+....+.+... ....+..+.+..++.++...+...++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG-TALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            877774  4555567777777776664333222  122222332233333222 22223445566788889899999999


Q ss_pred             HHHHHHHHHHHHhcccccC
Q 023413          263 SDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       263 ~pi~a~l~~~~~~~E~~s~  281 (282)
                      +|+++.+++++++||+++.
T Consensus       228 ~pv~~~ll~~~~~~E~~~~  246 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSL  246 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCH
Confidence            9999999999999999985

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=2.9e-26  Score=197.09  Aligned_cols=253  Identities=13%  Similarity=0.050  Sum_probs=180.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccC-----CcchhH--HHHHH
Q 023413            8 WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQP-----LKAKWY--YYLIL   80 (282)
Q Consensus         8 ~~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~--~~~~~   80 (282)
                      |.+++.+|.++.++++++|+..+.+.|...   +.+|....++|+.++.+++.+....+++.     ..++++  .....
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLIY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAV   78 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHH
Confidence            455677899999999999999999998753   47899999999999998777766543211     011222  22345


Q ss_pred             HHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCC
Q 023413           81 GLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSS  159 (282)
Q Consensus        81 g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~  159 (282)
                      +.+.... +.++++|++++++++++++.++.|+++.+++++++|||+++++|.|+++++.|+.++..++++        .
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~--------~  150 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS--------L  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC--------c
Confidence            5555555 778889999999999999999999999999999999999999999999999999998743211        1


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcccC--hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc---chhHHHHHHH
Q 023413          160 PRKGDALVIAGATLYAVSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQSIHWSA---GAALPFFGYA  234 (282)
Q Consensus       160 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  234 (282)
                          ..++++++++||.|.+..||..++..  ....+.++...+.....+.   .+.. ....+.+.   +......+. 
T Consensus       151 ----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~g~-  221 (296)
T PRK15430        151 ----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TSHMGQNPMSLNLLLIAAGI-  221 (296)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-cccccCCcHHHHHHHHHHHH-
Confidence                14688899999999999998643222  2333344444443332111   1111 11111111   112222222 


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+. ..+..+.+..++.++...+...+.+|+++++++++++||++++
T Consensus       222 ~t~-i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~  267 (296)
T PRK15430        222 VTT-VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGA  267 (296)
T ss_pred             HHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence            222 3346667788999999999999999999999999999999986

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=1.5e-25  Score=192.96  Aligned_cols=253  Identities=15%  Similarity=0.095  Sum_probs=178.9

Q ss_pred             HHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH-HHHHHHHh
Q 023413           17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAY   95 (282)
Q Consensus        17 ~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al   95 (282)
                      ++.+..+++|+.++..+|...  ++.+|....++|+.++.+.+.++..++    +++++.....|.+.... ..+++.++
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~--~~~~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~   80 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGL--HNMPPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAI   80 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            457788999999999999876  468899999999999887666554322    22344455556655555 44566888


Q ss_pred             hc-cchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHH
Q 023413           96 QY-TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLY  174 (282)
Q Consensus        96 ~~-~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  174 (282)
                      ++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++.++     ...+..|+.+++.++++|
T Consensus        81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-----~~~~~~G~~l~l~aal~~  155 (299)
T PRK11453         81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG-----QHVAMLGFMLTLAAAFSW  155 (299)
T ss_pred             HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-----cchhHHHHHHHHHHHHHH
Confidence            88 688999999999999999999999999999999999999999999988532221     122357999999999999


Q ss_pred             HHHHHHHHHhhcccChh---HHHHHHHHHHHHHHHHHHHHHhhcc-----ccccccccchhHHHHHHHHHHHHHHHHHHH
Q 023413          175 AVSNVSEEFLVKKADRI---ELMAFLGLFGGIISAVQISILERKE-----LQSIHWSAGAALPFFGYALAMFLFYSFVPI  246 (282)
Q Consensus       175 a~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (282)
                      +.|++.+||..++.++.   ....+....+.+.........++.+     ..+.+++.+..+.+.+...+... |..+.+
T Consensus       156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~-~~l~~~  234 (299)
T PRK11453        156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVG-YGIWGT  234 (299)
T ss_pred             HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence            99999999976654432   3344444444433333322333221     11223333444455553333222 244455


Q ss_pred             HHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       247 ~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..++.++...+...++||+++.+++++++||++++
T Consensus       235 ~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~  269 (299)
T PRK11453        235 LLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG  269 (299)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence            66777777777788889999999999999999985

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.95  E-value=6.4e-29  Score=197.95  Aligned_cols=277  Identities=67%  Similarity=1.131  Sum_probs=251.5

Q ss_pred             Cchhhhh-hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHH
Q 023413            2 VSFKEFW-TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLIL   80 (282)
Q Consensus         2 ~~~~~~~-~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   80 (282)
                      .|++|+| ++|.++|+.++...++|.+..++.++++++++...|...+|..+...+++..+...+|++..+..|+.+++.
T Consensus         5 ~~~~eik~tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYill   84 (336)
T KOG2766|consen    5 FNFNEIKSTKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILL   84 (336)
T ss_pred             hhHHHhhhchhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhhe
Confidence            4789999 888899999999999999999999999999988999999999999999999999998876667888889999


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCc
Q 023413           81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSP  160 (282)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  160 (282)
                      ++...-+|++...|.||++...++++-.-..+.+.+++|+++|.|.++.++.|+++++.|+.+++..|...++...+.++
T Consensus        85 a~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp  164 (336)
T KOG2766|consen   85 AFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNP  164 (336)
T ss_pred             eEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999988877666678888


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHH
Q 023413          161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLF  240 (282)
Q Consensus       161 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
                      .+|+.+.+++|-+||+.++..+...|+.|..+.+....++|+++..+. .+++..+.....|++.. ..++...++++++
T Consensus       165 ~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i-~~yl~f~L~MFll  242 (336)
T KOG2766|consen  165 VKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAI-FLYLRFALTMFLL  242 (336)
T ss_pred             ccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHH-HHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999887 67887777777787443 4446688889999


Q ss_pred             HHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccCC
Q 023413          241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCKM  282 (282)
Q Consensus       241 ~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~~  282 (282)
                      |.....+.+..+++..|+..+++-+.+.+.  ..||.+++|+
T Consensus       243 Ysl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL  282 (336)
T KOG2766|consen  243 YSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL  282 (336)
T ss_pred             HHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh
Confidence            999999999999999999988888888887  4567777764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=2.2e-25  Score=191.34  Aligned_cols=256  Identities=15%  Similarity=0.049  Sum_probs=189.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cCCcchhHHHHHHHHHHHHH
Q 023413            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus         9 ~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~   87 (282)
                      +.++.+|+.+..+..++|+..+.+.|+...  +.+|....++|+.++.+++.++...++ +.++++++..+..|++....
T Consensus         7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (293)
T PRK10532          7 KLPVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGM   84 (293)
T ss_pred             ccccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHH
Confidence            334578889999999999999999999885  478999999999999998887765433 34466777778888876555


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHH
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALV  167 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~  167 (282)
                      +.++++|++|++++.++++.++.|+++.+++    +||+++.  .++.+++.|+.++..++.+.     +.....|++++
T Consensus        85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~-----~~~~~~G~ll~  153 (293)
T PRK10532         85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDV-----SHVDLTGAALA  153 (293)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCc-----ccCChHHHHHH
Confidence            8888899999999999999999999998876    3665544  45677899999887533221     11235799999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHH
Q 023413          168 IAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPIL  247 (282)
Q Consensus       168 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (282)
                      ++++++||.|.+..||..++.++... .+....+.+++.+.....+.  ....+++.+....+.+...+ ...|..+.+.
T Consensus       154 l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t-~~~~~l~~~~  229 (293)
T PRK10532        154 LGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILST-ALPYSLEMIA  229 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            99999999999999998877777665 45556666665555433221  11122222222334443333 2223455667


Q ss_pred             HHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          248 LKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       248 ~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .++.++...+...++||+++.+++++++||++++
T Consensus       230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~  263 (293)
T PRK10532        230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL  263 (293)
T ss_pred             HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence            8888889999999999999999999999999985

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.94  E-value=4.9e-25  Score=190.22  Aligned_cols=243  Identities=9%  Similarity=0.075  Sum_probs=186.0

Q ss_pred             hhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHH--hhc--cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhh
Q 023413           30 GFSSSELARKGINAPTSQSFFNYVLLAIVYGSLML--YRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVML  105 (282)
Q Consensus        30 ~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~--~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~  105 (282)
                      ++.-|+..+ +..+|...++.|+..+.+...+...  .++  +.++++++.....|+++.....+.+.|++|++++.+++
T Consensus        18 ~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~l   96 (302)
T TIGR00817        18 NIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHT   96 (302)
T ss_pred             HHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            344444443 4578999999999998877665521  111  34567888889999997555778889999999999999


Q ss_pred             hccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhh
Q 023413          106 LDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLV  185 (282)
Q Consensus       106 l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~  185 (282)
                      +.++.|+++.+++++++|||++++++.++.+++.|+.+....+        .+....|++++++++++|++|++..||..
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~  168 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE--------LSFNWAGFLSAMISNITFVSRNIFSKKAM  168 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc--------ccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999998754211        11235799999999999999999999988


Q ss_pred             c--ccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----cch-hH---HHHHHHHHHHHHHHHHHHHHHHhhHH
Q 023413          186 K--KADRIELMAFLGLFGGIISAVQISILERKELQSIHWS-----AGA-AL---PFFGYALAMFLFYSFVPILLKTNGAT  254 (282)
Q Consensus       186 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~a~  254 (282)
                      +  +.|+.+.+.++...+.+.+.|.....++.+....++.     ... ..   .......++..++.......++.++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~  248 (302)
T TIGR00817       169 TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL  248 (302)
T ss_pred             ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence            8  7899999999999999888887655543221111110     111 11   11112224445555666788999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          255 MLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       255 ~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..++..+++|++++++|++++||++|+
T Consensus       249 t~sv~~~l~pv~~~~~~~~~lge~lt~  275 (302)
T TIGR00817       249 THSVGNCMKRVVVIVVSILFFGTKISP  275 (302)
T ss_pred             HHHHHhhhhhhheeeeehhhcCCCCch
Confidence            999999999999999999999999986

specificities overlap.

>TIGR00688 rarD rarD protein

Probab=99.93  E-value=1.5e-23  Score=176.74  Aligned_cols=242  Identities=14%  Similarity=-0.013  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc----------CCcch-hHHHHHHHH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ----------PLKAK-WYYYLILGL   82 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----------~~~~~-~~~~~~~g~   82 (282)
                      +|+.+...++++|+..+.+.|.+.   +.+|.+++++|+.++.+++.++...+++          ..+++ +......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            588899999999999999999843   4789999999999999887776533211          11222 223455666


Q ss_pred             HHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcch
Q 023413           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRK  162 (282)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~  162 (282)
                      +....+.++++|++++++++++++.++.|+++++++++++|||+++++|+++.+++.|+.++..++ .      + .   
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-~------~-~---  147 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-G------S-L---  147 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-C------C-c---
Confidence            655447788899999999999999999999999999999999999999999999999999876421 1      1 1   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhcccccccc-ccchhHHHHHHHHHHHHHH
Q 023413          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHW-SAGAALPFFGYALAMFLFY  241 (282)
Q Consensus       163 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  241 (282)
                       ...++++++|||.|.+..||..++ +..+.... .........+.....+..+....+. ..|....+.+. .+ ...|
T Consensus       148 -~~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~t-~i~~  222 (256)
T TIGR00688       148 -PWEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGL-IT-GTPL  222 (256)
T ss_pred             -hHHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHH-HH-HHHH
Confidence             135789999999999999986543 33322221 1111112111111111111111112 13334444443 23 2344


Q ss_pred             HHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHH
Q 023413          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGA  274 (282)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~  274 (282)
                      ..+.+..++.++...+...++||+++.+++.+.
T Consensus       223 ~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       223 LAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            667778899999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.92  E-value=6.7e-23  Score=179.73  Aligned_cols=259  Identities=12%  Similarity=0.037  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhhcCCCc-hHHHHHHHHHHHHHHHHHHHHh--hccC----CcchhHHHHHHHHHHH
Q 023413           13 LLGLGLGQFLSLLITSTGFSSSELARKGINA-PTSQSFFNYVLLAIVYGSLMLY--RRQP----LKAKWYYYLILGLIDV   85 (282)
Q Consensus        13 ~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~--~~~~----~~~~~~~~~~~g~~~~   85 (282)
                      ++-..+....-.+........|.+.+  ..+ |..++.+|+.++.++...+...  ++++    .+++++..+..|+++.
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            34444443333444444555555553  356 9999999999998766554322  2111    1346778889999998


Q ss_pred             HHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHH
Q 023413           86 EGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDA  165 (282)
Q Consensus        86 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~  165 (282)
                      ..+...+.|+++++++.++++.++.|+++++++++++|||++++++.++++++.|+.+....+.       + ....|++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~-~~~~G~~  197 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------H-FTWLAFW  197 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------h-hHHHHHH
Confidence            8877788999999999999999999999999999999999999999999999999999875221       1 2367999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccc-------ChhHHHHHHHHHHHHHHHHHHHHHhhccccc------cccccc--hhH--
Q 023413          166 LVIAGATLYAVSNVSEEFLVKKA-------DRIELMAFLGLFGGIISAVQISILERKELQS------IHWSAG--AAL--  228 (282)
Q Consensus       166 ~~l~a~~~~a~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~--  228 (282)
                      +++++++++|++++..|+..++.       ++.+...+....+.+.++|.....|......      .+++.+  ...  
T Consensus       198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~  277 (350)
T PTZ00343        198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF  277 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH
Confidence            99999999999999999987653       3555666668888888887765555321110      011111  111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          229 PFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .....++.+++++.......++.++...++...++|+++++.|++++||++|+
T Consensus       278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~  330 (350)
T PTZ00343        278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL  330 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCch
Confidence            12224666677776666788899999999999999999999999999999986

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.91  E-value=4.6e-23  Score=176.07  Aligned_cols=253  Identities=15%  Similarity=0.085  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhh--c---cCCcchhHHHHHHHHH-HHHHHH
Q 023413           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR--R---QPLKAKWYYYLILGLI-DVEGNF   89 (282)
Q Consensus        16 ~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~--~---~~~~~~~~~~~~~g~~-~~~~~~   89 (282)
                      +.+.+.++++|+..+...|...++  .++  ..+++.....+.+.++..++  +   ++.+++++.....+.+ ....+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            467789999999999999977653  233  34777777777777776553  1   2223444444444444 444488


Q ss_pred             HHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHH
Q 023413           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA  169 (282)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~  169 (282)
                      ++++|+++.++++++++.++.|+++.+++++++|||+++++|+|+.+++.|+.++..++..       ..+..|+.++++
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-------~~~~~g~~~~l~  151 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-------QHRRKAYAWALA  151 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-------ccchhHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999999988753321       122468889999


Q ss_pred             HHHHHHHHHHHHHHhhcccChhH----HHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q 023413          170 GATLYAVSNVSEEFLVKKADRIE----LMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP  245 (282)
Q Consensus       170 a~~~~a~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (282)
                      ++++|+.|++..|+..++.++..    ...+..........+.....+..+....+.+. ....+.+...+ ...|..+.
T Consensus       152 aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s-~l~~~l~~  229 (281)
T TIGR03340       152 AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQI-LPSATLGGLMI-GGAYALVL  229 (281)
T ss_pred             HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHH-HHHHHHHHHHH-HHHHHHHH
Confidence            99999999999997655444332    22222222212111211111211111111111 12222332222 22234445


Q ss_pred             HHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       246 ~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +..++.++...+...+++|+++.+++++++||++++
T Consensus       230 ~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~  265 (281)
T TIGR03340       230 WAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYL  265 (281)
T ss_pred             HHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccH
Confidence            566777777777778888999999999999999985

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.88  E-value=1e-19  Score=155.77  Aligned_cols=260  Identities=20%  Similarity=0.219  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---cCCcchhHHHHHHHHHHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~   87 (282)
                      +...+.....+.++.|+......+...+. ..++....+.|...+.....+...+++   ++..+++++....+.+....
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLAL   82 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHH
Confidence            34466677778889999999988888763 355666667799999887444444332   22233344566666666666


Q ss_pred             -HHHHHHHhhccchhhHhhhccchhHHHHHHHH-HHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHH
Q 023413           88 -NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTW-IFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDA  165 (282)
Q Consensus        88 -~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~-l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~  165 (282)
                       ..+++.++++++++.++++.++.|+++.++++ +++|||++++++.++.+++.|+.++..++..+.    .. +..|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~----~~-~~~g~~  157 (292)
T COG0697          83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG----IL-SLLGLL  157 (292)
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch----hH-HHHHHH
Confidence             77888999999999999999999999999997 667999999999999999999999998655421    00 468999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccChhHHHH-HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHH
Q 023413          166 LVIAGATLYAVSNVSEEFLVKKADRIELMA-FLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFV  244 (282)
Q Consensus       166 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (282)
                      +++.++++++++.+..|+.. +.++..... ++.. +....... ......+ .+.++..+....+.+...+. ..+..+
T Consensus       158 ~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~g~~~~~-i~~~~~  232 (292)
T COG0697         158 LALAAALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLLL-FFLSGFG-APILSRAWLLLLYLGVFSTG-LAYLLW  232 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHHH-HHhcccc-ccCCHHHHHHHHHHHHHHHH-HHHHHH
Confidence            99999999999999999877 666666555 4444 22221111 1111111 12233333333334432221 223444


Q ss_pred             HHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+..+..++...+...+++|+++++++++++||+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~  269 (292)
T COG0697         233 YYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP  269 (292)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence            5567777777777777888999999999999999975

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.86  E-value=9.2e-22  Score=158.22  Aligned_cols=269  Identities=17%  Similarity=0.213  Sum_probs=200.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc---CCcchhHHHHHHHH
Q 023413            6 EFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ---PLKAKWYYYLILGL   82 (282)
Q Consensus         6 ~~~~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~g~   82 (282)
                      +..++++-+|+.+.-++ ..+..+.+.++...   +.+|....-.|++.-.++..|...++++   .++.+.++++++|+
T Consensus        30 ri~~d~p~~gl~l~~vs-~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~  105 (346)
T KOG4510|consen   30 RISKDKPNLGLLLLTVS-YFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGF  105 (346)
T ss_pred             HhhcCCCccCceehhhH-HHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehh
Confidence            34445666788777777 55666666665555   3568888888987777777776655541   12233344789999


Q ss_pred             HHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCC-----CC
Q 023413           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG-----SG  157 (282)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~-----~~  157 (282)
                      .+..+.+..|+|++|++.++++++.+++|.++.+++|.++|||.++...++..+.+.|+++++.|..-.+++.     .+
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~  185 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ  185 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998653322221     11


Q ss_pred             -CCcchhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHH
Q 023413          158 -SSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA  236 (282)
Q Consensus       158 -~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
                       ..+.+|...++.++..-|.-.++.|+.-|+.|......|..+.+.+...+..........+ ..+.+++....+|  ..
T Consensus       186 ~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lG--vf  262 (346)
T KOG4510|consen  186 VEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLG--VF  262 (346)
T ss_pred             ccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEeh--hh
Confidence             3346799999999999998899999888999988777777788877776554333222222 3444444433333  23


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       237 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+..+......++...+.-.+++.+++.+++.+|...+|||.||+
T Consensus       263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~  307 (346)
T KOG4510|consen  263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTI  307 (346)
T ss_pred             hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChH
Confidence            344445556677888888888999999999999999999999986

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.82  E-value=9.3e-18  Score=143.63  Aligned_cols=250  Identities=15%  Similarity=0.106  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHH----HHHHHHHHHHHHH
Q 023413           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYY----LILGLIDVEGNFL   90 (282)
Q Consensus        15 g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~   90 (282)
                      +++++++.+++|+..+...|+..  + .++.+..  |..++.+++..+....+++. ++.+..    +..|..-..++.+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g-~~~~~~~--~~~~g~l~~~~~~~~~~~~~-~~~~~~~~~g~l~G~~w~ig~~~   75 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--G-GPYSQTL--GTTFGALILSIAIAIFVLPE-FWALSIFLVGLLSGAFWALGQIN   75 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--C-CHHHHHH--HHHHHHHHHHHHHHHHhCCc-ccccHHHHHHHHHHHHHHhhhhh
Confidence            57889999999999999999876  3 4444443  77777776665543332211 222223    3333333334789


Q ss_pred             HHHHhhccchhhHhhhcc-chhHHHHHHHHHHhhcccchhh----hhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHH
Q 023413           91 VVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKK----ITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDA  165 (282)
Q Consensus        91 ~~~al~~~~~~~~~~l~~-~~p~~~~il~~l~l~ek~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~  165 (282)
                      ++.|+++.+++.+..+.+ +.|++..+.+.+++|||.++++    ++|+++++.|++++...++++.++....+..+|+.
T Consensus        76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~  155 (290)
T TIGR00776        76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL  155 (290)
T ss_pred             HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence            999999999999999999 7888899999999999999999    99999999999999775433211110023368999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccChhHHH---HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHH--HHHHHHHH
Q 023413          166 LVIAGATLYAVSNVSEEFLVKKADRIELM---AFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFG--YALAMFLF  240 (282)
Q Consensus       166 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  240 (282)
                      +++.++++|+.|.+..|+.  +.||.+..   .+....+..+..+..  .+.+   +...+........|  .+.++.+|
T Consensus       156 ~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~Gi~~~ia~~~y  228 (290)
T TIGR00776       156 LLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAK---PLKKYAILLNILPGLMWGIGNFFY  228 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--hccc---chHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999975  47787773   433344444332221  1111   11111111112233  23333333


Q ss_pred             HHHHHHHHH-HhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          241 YSFVPILLK-TNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       241 ~~~~~~~~~-~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                          ....+ +.++...+.....||+.+.+++++++||+.+.
T Consensus       229 ----~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~  266 (290)
T TIGR00776       229 ----LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTK  266 (290)
T ss_pred             ----HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence                33344 66777777777788999999999999999875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.82  E-value=9.8e-18  Score=137.63  Aligned_cols=250  Identities=16%  Similarity=0.084  Sum_probs=183.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHh-hc-------cCCcchhHHHHHHH
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY-RR-------QPLKAKWYYYLILG   81 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~-------~~~~~~~~~~~~~g   81 (282)
                      ++..+|+++++.+.++|+....+.|.+.   ..++.++...|...+..+....+.. |+       .++++.+.. ...+
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~-~~l~   78 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLM-LALT   78 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHH-HHHH
Confidence            4456899999999999999999999997   4778999999999988887766543 22       122223322 3444


Q ss_pred             HHHHHHHHHHH-HHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCc
Q 023413           82 LIDVEGNFLVV-KAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSP  160 (282)
Q Consensus        82 ~~~~~~~~~~~-~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  160 (282)
                      ......|+..| +|.++..+-++++-++..|++.++++.+++|||+++.||+++.++.+||.......++        -+
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~--------lp  150 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS--------LP  150 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC--------Cc
Confidence            44555566555 9999999999999999999999999999999999999999999999999988764332        22


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhcc--ccccccccchhHHHHH--HHHH
Q 023413          161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKE--LQSIHWSAGAALPFFG--YALA  236 (282)
Q Consensus       161 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~  236 (282)
                          ..++.-+++|+.|...-|+.  +.|+.+-.+.....-....+......+..+  ..+-+.+.+..+...|  +...
T Consensus       151 ----wval~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavp  224 (293)
T COG2962         151 ----WVALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVP  224 (293)
T ss_pred             ----HHHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHH
Confidence                34555678899999877754  366777777777666666655544443332  1112333333444444  3444


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       237 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..+|.    ..-++.+-...+..+|.+|.+-.+++.+++||+++.
T Consensus       225 L~lf~----~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~  265 (293)
T COG2962         225 LLLFA----AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDS  265 (293)
T ss_pred             HHHHH----HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            44442    246777888899999999999999999999999873

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.80  E-value=7e-17  Score=139.35  Aligned_cols=254  Identities=19%  Similarity=0.217  Sum_probs=194.4

Q ss_pred             HHhhhhHHhhhcCCCc--hHHHHHHHHHHHHHHHHHHHHhhc--cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 023413           28 STGFSSSELARKGINA--PTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSV  103 (282)
Q Consensus        28 ~~~~~~~~l~~~~~~~--p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~  103 (282)
                      ..+...+.+.+++...  |..+++.++....+...+.....+  ++++.+++.+...+.+......+.+.|++|.+....
T Consensus        14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~   93 (303)
T PF08449_consen   14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQ   93 (303)
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence            3566666776664444  899999999998887777665433  556778888999999998889999999999999999


Q ss_pred             hhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCC--CCCCcchhHHHHHHHHHHHHHHHHHH
Q 023413          104 MLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG--SGSSPRKGDALVIAGATLYAVSNVSE  181 (282)
Q Consensus       104 ~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~G~~~~l~a~~~~a~~~v~~  181 (282)
                      .+..++.|+.+++++.+++|||.+++|+.++++..+|+++....|..+..+.  ...+...|+.+.+.+.++.|.+.+.+
T Consensus        94 ~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~q  173 (303)
T PF08449_consen   94 IVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQ  173 (303)
T ss_pred             HHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988665433222  11122349999999999999999999


Q ss_pred             HHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHh-h--ccc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 023413          182 EFLVKKA--DRIELMAFLGLFGGIISAVQISILE-R--KEL-QSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATM  255 (282)
Q Consensus       182 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  255 (282)
                      ||..+++  ++.+.+.+....+.+...+.....+ +  .+. +....+......++...++.......+....+..++..
T Consensus       174 e~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~  253 (303)
T PF08449_consen  174 EKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALT  253 (303)
T ss_pred             HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence            9988754  4788999999999888876655521 1  111 11111122222223333333333455566788899999


Q ss_pred             HHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          256 LNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       256 ~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .++...++.+.+++++..++||++++
T Consensus       254 ~t~v~t~Rk~~sillS~~~f~~~~~~  279 (303)
T PF08449_consen  254 TTIVTTLRKFLSILLSVIIFGHPLSP  279 (303)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCcCCh
Confidence            99999999999999999999999886

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.75  E-value=1.2e-15  Score=122.27  Aligned_cols=236  Identities=16%  Similarity=0.056  Sum_probs=179.9

Q ss_pred             HhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhh-ccCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhc
Q 023413           29 TGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR-RQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLD  107 (282)
Q Consensus        29 ~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~  107 (282)
                      -..+.|-+.  ....|...+.+|...+.++++.+.+.+ ++..+++++.....|......|.++|.|++..|.+.+..+.
T Consensus        27 Gas~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE  104 (292)
T COG5006          27 GASFAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE  104 (292)
T ss_pred             hHHHHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence            355566666  356688999999999999999877543 37778899999999999888899999999999999999999


Q ss_pred             cchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 023413          108 CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKK  187 (282)
Q Consensus       108 ~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~  187 (282)
                      ++.|+....++.    +|.  +....+.+++.|+.++...+.+ .    +.....|..+++.++.||+.|.+..||.-+.
T Consensus       105 F~GPL~vA~~~s----Rr~--~d~vwvaLAvlGi~lL~p~~~~-~----~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~  173 (292)
T COG5006         105 FTGPLAVALLSS----RRL--RDFVWVALAVLGIWLLLPLGQS-V----WSLDPVGVALALGAGACWALYIVLGQRAGRA  173 (292)
T ss_pred             hccHHHHHHHhc----cch--hhHHHHHHHHHHHHhheeccCC-c----CcCCHHHHHHHHHHhHHHHHHHHHcchhccc
Confidence            999998877643    443  4445566678888888763322 1    2233589999999999999999999998877


Q ss_pred             cChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Q 023413          188 ADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGY-ALAMFLFYSFVPILLKTNGATMLNLSLLTSDMW  266 (282)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~  266 (282)
                      .|..+-+...+..+.++..|+.....+.    .-+++.....-++. .++...=|..-...+++.+...+++...+||.+
T Consensus       174 ~~g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~  249 (292)
T COG5006         174 EHGTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPAL  249 (292)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhhhhcch----hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHH
Confidence            7778888888999998888875322221    11222222222232 344455566677788899999999999999999


Q ss_pred             HHHHHHHHhcccccC
Q 023413          267 AVLIRIGAYHEKVCK  281 (282)
Q Consensus       267 a~l~~~~~~~E~~s~  281 (282)
                      +.+.|+.++||++|+
T Consensus       250 aAl~G~i~L~e~ls~  264 (292)
T COG5006         250 AALSGLIFLGETLTL  264 (292)
T ss_pred             HHHHHHHHhcCCCCH
Confidence            999999999999985

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.66  E-value=1.3e-15  Score=129.40  Aligned_cols=244  Identities=12%  Similarity=0.146  Sum_probs=196.1

Q ss_pred             HhhhhHHhhhc-CCCchHHHHHHHHHHHHHHHHHHHHhhc-c----CCcchhHHHHHHHHHHHHHHHHHHHHhhccchhh
Q 023413           29 TGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS  102 (282)
Q Consensus        29 ~~~~~~~l~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  102 (282)
                      .+...|++.++ ++..|...+..+...+.+........+. +    .++..+...+..|++...++++.+.|+++.+++.
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF  111 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSF  111 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhH
Confidence            45566666665 6777899999988887776665544432 1    1345778889999999999999999999999999


Q ss_pred             HhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 023413          103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEE  182 (282)
Q Consensus       103 ~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~  182 (282)
                      .+.+..+.|+++.++++++.+|+.+++.+..+...+.|+.+....+.+        -++.|...++++.+..+..+++.|
T Consensus       112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~--------fn~~G~i~a~~s~~~~al~~I~~~  183 (316)
T KOG1441|consen  112 YQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELS--------FNLFGFISAMISNLAFALRNILSK  183 (316)
T ss_pred             HHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecccc--------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999873332        447999999999999999999999


Q ss_pred             Hhhc----ccChhHHHHHHHHHHHHHHH-HHHHHHhhccc---cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 023413          183 FLVK----KADRIELMAFLGLFGGIISA-VQISILERKEL---QSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGAT  254 (282)
Q Consensus       183 ~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  254 (282)
                      +..+    +.|+.+...++..++...++ |+....|+...   ...+|+.......... ...++.|.....++.+.++.
T Consensus       184 ~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSal  262 (316)
T KOG1441|consen  184 KLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSAL  262 (316)
T ss_pred             HhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCch
Confidence            8874    36799999999999999988 65544444433   2224443322222223 66677788889999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          255 MLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       255 ~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..++...++-.+.+..++.+|+|++|+
T Consensus       263 T~~V~g~~K~~~vi~~s~~iF~~pvt~  289 (316)
T KOG1441|consen  263 TYSVAGHMKRIVVIVVSWLIFGNPVTF  289 (316)
T ss_pred             hhhhhccceEEEEEEeEeeeecCCCch
Confidence            999999999999999999999998876

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=1.6e-14  Score=122.08  Aligned_cols=269  Identities=18%  Similarity=0.209  Sum_probs=186.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcC-CCchHHHHHHHHHHHHHHHHHHH-----H----hh-c-------c--
Q 023413            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKG-INAPTSQSFFNYVLLAIVYGSLM-----L----YR-R-------Q--   68 (282)
Q Consensus         9 ~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~-~~~p~~~~~~r~~~~~l~l~~~~-----~----~~-~-------~--   68 (282)
                      +++...|+.+..+..++|-.+....+.+..++ +..|+..++.....-.+-+.++.     +    .| +       .  
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            45667899999999999999999999999873 33577777655333322222211     0    01 0       0  


Q ss_pred             ----------------------------------------------------CCcc------------hhH-HHHHHHHH
Q 023413           69 ----------------------------------------------------PLKA------------KWY-YYLILGLI   83 (282)
Q Consensus        69 ----------------------------------------------------~~~~------------~~~-~~~~~g~~   83 (282)
                                                                          ...+            +.. .-+..+.+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                                                0001            111 12344444


Q ss_pred             HHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchh
Q 023413           84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKG  163 (282)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G  163 (282)
                      =+..++.++.|+.+++++..+++.+++-+||..++.++.+||+++.+.+++.+.+.|++++..++.+.+++..+.+...|
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG  248 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG  248 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence            45558889999999999999999999999999999999999999999999999999999999976655444455566899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccc----ChhHHHHHHHHHHHHHHHHHHHHHhhcccccccc--ccch----hHHHHHH
Q 023413          164 DALVIAGATLYAVSNVSEEFLVKKA----DRIELMAFLGLFGGIISAVQISILERKELQSIHW--SAGA----ALPFFGY  233 (282)
Q Consensus       164 ~~~~l~a~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~  233 (282)
                      .++++.+|+.||+|.++.||...+.    |-....++..++..++++|...+.+....+.++.  +...    ..-++++
T Consensus       249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligt  328 (416)
T KOG2765|consen  249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGT  328 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHH
Confidence            9999999999999999999877655    3445667777777787776655544322232222  1111    1224455


Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          234 ALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .++=++|..+    .-..++.+..+.+.++...+++.+.++-|..+|+
T Consensus       329 vvSDylW~~a----~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  329 VVSDYLWAKA----VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA  372 (416)
T ss_pred             HHHHHHHHHH----HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence            6665665443    3444555555555555667999999887887775

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.64  E-value=1.2e-13  Score=114.75  Aligned_cols=209  Identities=18%  Similarity=0.164  Sum_probs=153.0

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      ..+++..++...+++....|.+.+.++++.+++..+++.++..++|++++.+++|+|++++||.++.+.+.|+.++..++
T Consensus        12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            34567778888899988889999999999999999999999999999999999999999999999999999999997754


Q ss_pred             CCCCCCC---------CCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccC--hhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 023413          149 VHAGDRG---------SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKEL  217 (282)
Q Consensus       149 ~~~~~~~---------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (282)
                      ....++.         .+.+...|....+.++++-++..++.+|..|+.+  ....+......+.+..++.....++.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~  171 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAI  171 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            4331111         1234568999999999999999999999998764  3344555555566655554433333222


Q ss_pred             cc----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          218 QS----IHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       218 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+    ..++.+.+........+.    .......++.+...-+.....+.+++.+.++.+||+++|.
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gG----llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~  235 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGG----LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL  235 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhh----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            21    123333332222212221    2233356777777777777777999999999999999985

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.61  E-value=2e-14  Score=103.43  Aligned_cols=129  Identities=16%  Similarity=0.200  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---c---CCcchhHHHHHHHHHHHHHHH
Q 023413           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---Q---PLKAKWYYYLILGLIDVEGNF   89 (282)
Q Consensus        16 ~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~---~~~~~~~~~~~~g~~~~~~~~   89 (282)
                      .++++++|+.++...++.|.--+  ..+|...++.|..+...++..++...+   .   ..++.|.+..+.|+.+.....
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            47789999999999999988763  567899999999999988888877654   2   356778888888877777688


Q ss_pred             HHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ++|+|++...++.+.++..++|.++.+++++++|||+|.++|+|+.++.+|+.++..
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999998753

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.51  E-value=3.9e-11  Score=99.21  Aligned_cols=237  Identities=14%  Similarity=0.198  Sum_probs=183.1

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhc--cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHH
Q 023413           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL  117 (282)
Q Consensus        40 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il  117 (282)
                      .+.+|.++.+.+.+.+.+.-..++..++  ...+++|+.+...+..+....++-+.|++|++-....+-.++..+-++++
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm  126 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM  126 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence            4457889999998888877655554433  44567888899999999888999999999999999999999999999999


Q ss_pred             HHHHhhcccchhhhhhHHHhhhcceeeEeecCCC-CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcc--cChhHHH
Q 023413          118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA-GDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKK--ADRIELM  194 (282)
Q Consensus       118 ~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~-~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~  194 (282)
                      +.++.|+|.+..+.....++-.|+.+....+..+ .......+...|..+....-+.-++.+..++++.++  .++.+++
T Consensus       127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM  206 (327)
T KOG1581|consen  127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM  206 (327)
T ss_pred             HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence            9999999999999999999999999887754333 222344567899999999999999999999999885  4588999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccccc-----ccccchhHHHHH-H-HHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Q 023413          195 AFLGLFGGIISAVQISILERKELQSI-----HWSAGAALPFFG-Y-ALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWA  267 (282)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a  267 (282)
                      .+..+.+.+..... .+.++...+..     +.+....+.+.. . .+++    ..+.+.++..++.....++.++-+++
T Consensus       207 ~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ----~FI~~TI~~FGslt~t~I~ttRk~~s  281 (327)
T KOG1581|consen  207 FGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQ----LFIFYTIERFGSLTFTTIMTTRKMVS  281 (327)
T ss_pred             HHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhh----heehhhHhhcccHHHHHHHHHHHHHH
Confidence            99999998887655 34333222211     111111222222 1 2333    33445678889999999999999999


Q ss_pred             HHHHHHHhcccccC
Q 023413          268 VLIRIGAYHEKVCK  281 (282)
Q Consensus       268 ~l~~~~~~~E~~s~  281 (282)
                      ++++.+.+|+++++
T Consensus       282 i~lS~i~f~h~~s~  295 (327)
T KOG1581|consen  282 IMLSCIVFGHPLSS  295 (327)
T ss_pred             HHHHHHHhCCccch
Confidence            99999999999886

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.40  E-value=6.5e-13  Score=99.17  Aligned_cols=118  Identities=24%  Similarity=0.446  Sum_probs=97.6

Q ss_pred             HHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-----cCCcchhHHHHHHHHHHHHH-HHHHHHHhhc
Q 023413           24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYLILGLIDVEG-NFLVVKAYQY   97 (282)
Q Consensus        24 ~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~   97 (282)
                      ++|+......|+..++  .+|...+++|+..+.+ ..+.....+     +.+++++......|.+.... +.++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            4688888889888863  7799999999999997 444443322     33455666677778775444 8888899999


Q ss_pred             cchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413           98 TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        98 ~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      .+++.++++.++.|+++.+++++++|||+++++++|+.+++.|++++
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998765

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.35  E-value=2.3e-11  Score=102.70  Aligned_cols=132  Identities=18%  Similarity=0.174  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---cCCcchhHHHHHHHHHHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~   87 (282)
                      ...+|..+++.++++|+......|+..++.+.++.....+++..+.+++.+.....+   ..+.+++...+..+.++...
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            446799999999999999999999988643333455666789999988888766543   22234455566677776555


Q ss_pred             -HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcce
Q 023413           88 -NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLV  142 (282)
Q Consensus        88 -~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~  142 (282)
                       ..++++++++.+++.++.+.++.|+++.+++++++|||++++++.|..+.+.|+.
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence             7778899999999999999999999999999999999999999999999999863

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.35  E-value=3.2e-09  Score=90.26  Aligned_cols=261  Identities=15%  Similarity=0.117  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHhhhhHHhhhcC--CCchHHHHHHHHHHHHHHHHHHHHhh-----c----------cCCcchhHHHHH
Q 023413           17 GLGQFLSLLITSTGFSSSELARKG--INAPTSQSFFNYVLLAIVYGSLMLYR-----R----------QPLKAKWYYYLI   79 (282)
Q Consensus        17 ~~~~~~a~~~~~~~~~~~~l~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~-----~----------~~~~~~~~~~~~   79 (282)
                      +........++......++..+++  ...|...++.-=..-.++....+++.     +          ...+++..+..+
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            444556666776777777777654  13344444443222222222222221     1          111223445566


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCC--C-CCC
Q 023413           80 LGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG--D-RGS  156 (282)
Q Consensus        80 ~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~--~-~~~  156 (282)
                      .+++...-|-+.+.++.+.+++..++..++..+-|.++..+++++|++++||.++.+...|+.++-.+.....  . ...
T Consensus        98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~  177 (345)
T KOG2234|consen   98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESS  177 (345)
T ss_pred             HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCc
Confidence            6777766676889999999999999999999999999999999999999999999999999999973322211  1 223


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHhhcccC--hhHHHHHHHHHHHHHHHHHHHHHhhcccc----ccccccchhHHH
Q 023413          157 GSSPRKGDALVIAGATLYAVSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQ----SIHWSAGAALPF  230 (282)
Q Consensus       157 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  230 (282)
                      +.++..|....+.++++-++..++.++..|+.+  ....+-....+|.+..+......++....    ...|+...+...
T Consensus       178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vV  257 (345)
T KOG2234|consen  178 AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVV  257 (345)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHH
Confidence            556678999999999999999999999997644  33333334445555554443333333221    112333333333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          231 FGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +.-+.+...    .....++.+...-........+++.+.++.++|-++|.
T Consensus       258 l~~a~gGLl----vs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~  304 (345)
T KOG2234|consen  258 LLNAVGGLL----VSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTL  304 (345)
T ss_pred             HHHhccchh----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence            322222211    12244555555555555555888899998888888763

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.30  E-value=1.1e-11  Score=91.15  Aligned_cols=101  Identities=18%  Similarity=0.429  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHhhc-------cCCcchhHHHHHHHHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHH
Q 023413           49 FFNYVLLAIVYGSLMLYRR-------QPLKAKWYYYLILGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI  120 (282)
Q Consensus        49 ~~r~~~~~l~l~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l  120 (282)
                      .+|+..+.+.+......++       ...++++.+....|.++... +.++++|.++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5788899888888776543       11235566667778887745 777779999999 58899999999999999999


Q ss_pred             HhhcccchhhhhhHHHhhhcceeeEeecCC
Q 023413          121 FLKTKYRYKKITGVVVCVAGLVTVIFSDVH  150 (282)
Q Consensus       121 ~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~  150 (282)
                      ++|||++++++.++.++++|+.++..++..
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999885543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.27  E-value=2.1e-09  Score=87.97  Aligned_cols=172  Identities=25%  Similarity=0.284  Sum_probs=131.7

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhc-----------------cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhh
Q 023413           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR-----------------QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS  102 (282)
Q Consensus        40 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  102 (282)
                      ++..|...+..-++-=.+++..+...|.                 .+++.+.+.++.-+++...+..+.+.++.+++++.
T Consensus        35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs  114 (372)
T KOG3912|consen   35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS  114 (372)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence            4556666655444444444444443322                 11133344456688999999999999999999999


Q ss_pred             HhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCC--CCCCcchhHHHHHHHHHHHHHHHHH
Q 023413          103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG--SGSSPRKGDALVIAGATLYAVSNVS  180 (282)
Q Consensus       103 ~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~G~~~~l~a~~~~a~~~v~  180 (282)
                      .+.+.....+|+-+++.-+++.+++.+||.|+.....|++.+...|.....+.  .-.+...|+++.+.+-+.-|+..+.
T Consensus       115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987654433222  2234568999999999999999999


Q ss_pred             HHHhhcc--cChhHHHHHHHHHHHHHHHHHHHH
Q 023413          181 EEFLVKK--ADRIELMAFLGLFGGIISAVQISI  211 (282)
Q Consensus       181 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  211 (282)
                      .+|..++  .+|.+..++...+|.+.+......
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~  227 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP  227 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence            9988775  569999999999997766554433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.24  E-value=2.1e-09  Score=90.04  Aligned_cols=258  Identities=14%  Similarity=0.062  Sum_probs=167.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHH--HHHHHHHHHHHHHHHhhc----cCCcchhHHHHHHHHHHHHH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSF--FNYVLLAIVYGSLMLYRR----QPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~----~~~~~~~~~~~~~g~~~~~~   87 (282)
                      ..+.-++.-.+......+.-|+.-. .+..|..+..  .+++.+.+.+...-..+-    +.+++..++++...++..+.
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls-~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLS-SYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence            3333333334444444444555444 3333555554  888888876665443332    34456677778888887666


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHH
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALV  167 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~  167 (282)
                      .+.-..+++|.++...+++....|+++++.+.+++|.|+++..|.++....+|......+|..        ....|..++
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s--------f~~~gY~w~  162 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS--------FNLRGYSWA  162 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce--------ecchhHHHH
Confidence            666679999999999999999999999999999999999999999999999998888775544        113599999


Q ss_pred             HHHHHHHHHHHHHHHHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHhhcc-c--cccccccc-hhHH-HHHHHHHHHHH
Q 023413          168 IAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKE-L--QSIHWSAG-AALP-FFGYALAMFLF  240 (282)
Q Consensus       168 l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~-~~~~-~~~~~~~~~~~  240 (282)
                      +...++-+.+.+..||..+..  +......|-.+.+.....+.....+..+ +  +..+|... .... .++..+++..-
T Consensus       163 ~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~is  242 (314)
T KOG1444|consen  163 LANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGIS  242 (314)
T ss_pred             HHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHH
Confidence            999999999999999987654  3567777777777777665554444322 1  11112211 1111 12222222222


Q ss_pred             HHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       241 ~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                       +......+..++..........-..+.+-+.++.|+++++
T Consensus       243 -y~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~  282 (314)
T KOG1444|consen  243 -YTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTF  282 (314)
T ss_pred             -HHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceech
Confidence             2223334455555555554444555666666677777776

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.20  E-value=4.2e-09  Score=87.58  Aligned_cols=201  Identities=11%  Similarity=0.067  Sum_probs=132.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHH-HHHHHHHHhhcccchhhhh----hHHHhhhcceeeEe
Q 023413           72 AKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPC-VMFLTWIFLKTKYRYKKIT----GVVVCVAGLVTVIF  146 (282)
Q Consensus        72 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~-~~il~~l~l~ek~~~~~~~----g~~l~~~Gv~l~~~  146 (282)
                      ..+..-++.|++=..++...+.|+++.+++.+.++..-..+. +.+++.++++|--+..+++    ++++.++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            555566777777777799999999999999999999777766 8899999999987777755    88888999999988


Q ss_pred             ecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccch
Q 023413          147 SDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGA  226 (282)
Q Consensus       147 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
                      .|+++++.+.+.+..+|....+.+.+.|..|.+..|.  .+.|+.+...-+..--.+-..++....+....+...|....
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil  200 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNIL  200 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhH
Confidence            6665443223445568999999999999999999884  34666665554432222222222211111111222233322


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhccccc
Q 023413          227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVC  280 (282)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s  280 (282)
                      .....  +.+...+..+..    ..+.........+.++++.+.|.+++||+=+
T Consensus       201 ~G~~w--~ignl~~~is~~----~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt  248 (269)
T PF06800_consen  201 TGLIW--GIGNLFYLISAQ----KNGVATAFTLSQLGVVISTLGGIFILKEKKT  248 (269)
T ss_pred             HHHHH--HHHHHHHHHhHH----hccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence            22222  333344444433    3333333334444599999999999999743

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.16  E-value=8.8e-09  Score=85.45  Aligned_cols=250  Identities=15%  Similarity=0.130  Sum_probs=164.4

Q ss_pred             HHHHHHhhhhHHhhhc---CCCchHHHHHHHHHHHHHHHHHHHHhhc-----cCCcchhHHHH---HHHHHHHHH-HHHH
Q 023413           24 LLITSTGFSSSELARK---GINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYL---ILGLIDVEG-NFLV   91 (282)
Q Consensus        24 ~~~~~~~~~~~~l~~~---~~~~p~~~~~~r~~~~~l~l~~~~~~~~-----~~~~~~~~~~~---~~g~~~~~~-~~~~   91 (282)
                      +.|=+..+..++..++   .+.-|...+.++..+-.++.......++     .+...+|..++   ....+..+. ..+.
T Consensus        22 l~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLS  101 (349)
T KOG1443|consen   22 LLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLS  101 (349)
T ss_pred             HHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccc
Confidence            4444444444444433   5677999998887776665554433222     12234455443   233333344 6677


Q ss_pred             HHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHH
Q 023413           92 VKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGA  171 (282)
Q Consensus        92 ~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~  171 (282)
                      +.|++|++.+..+...+++++|+.+++.++.=||+++.-..-+.++..|+++.+..+..        -...|..+...+.
T Consensus       102 N~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq--------f~i~Gf~lv~~aS  173 (349)
T KOG1443|consen  102 NWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ--------FNIEGFFLVLAAS  173 (349)
T ss_pred             cceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc--------eeehhHHHHHHHH
Confidence            89999999999999999999999999999888999999999999999999999873221        2346888888777


Q ss_pred             HHHHHHHHHHHHhhccc-----ChhHHHHHHHHHHHHHHHHHHHHHhhcccc--cccccc-------chhHHHHHHHHHH
Q 023413          172 TLYAVSNVSEEFLVKKA-----DRIELMAFLGLFGGIISAVQISILERKELQ--SIHWSA-------GAALPFFGYALAM  237 (282)
Q Consensus       172 ~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~  237 (282)
                      .+-++--...++..++.     +|............+.+++..+.+|+....  ...++.       +....+...+...
T Consensus       174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la  253 (349)
T KOG1443|consen  174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA  253 (349)
T ss_pred             HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence            77666555555555443     477777777777777777777778874322  111111       1111111122222


Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +..-..-..+....++...++....+-+...+++..+.+|.+|.
T Consensus       254 F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~  297 (349)
T KOG1443|consen  254 FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSL  297 (349)
T ss_pred             HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhh
Confidence            33323334456677777778888888899999999999998873

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.12  E-value=3.5e-10  Score=90.28  Aligned_cols=252  Identities=13%  Similarity=0.163  Sum_probs=172.9

Q ss_pred             HHHHHHhhhhHHhhhcCC----------CchHHHHHHHHHHHHHHHHHHHHhhc--cCCcchhHHHHHHHHHHHHHHHHH
Q 023413           24 LLITSTGFSSSELARKGI----------NAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLV   91 (282)
Q Consensus        24 ~~~~~~~~~~~~l~~~~~----------~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~   91 (282)
                      +|.-..++.-..+.+..+          -....+++.++..-.++.=++...|+  +.++.+-+.+...+..........
T Consensus        23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVss  102 (337)
T KOG1580|consen   23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSS  102 (337)
T ss_pred             heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhc
Confidence            455556677777665411          12344566666666655444443343  445566667777777776768888


Q ss_pred             HHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHH
Q 023413           92 VKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGA  171 (282)
Q Consensus        92 ~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~  171 (282)
                      +.|++|.+-....+-.++.|+-+++++.++.+++.+|+++..++.++.|+++....+.. ....++.....|.++.+++-
T Consensus       103 N~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K-v~g~e~~t~g~GElLL~lSL  181 (337)
T KOG1580|consen  103 NQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK-VGGAEDKTFGFGELLLILSL  181 (337)
T ss_pred             cchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc-cCCCcccccchHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999874333 22223444568999999999


Q ss_pred             HHHHHHHHHHHHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHhhcccc------ccccccchh-HHHHHHHHHHHHHHH
Q 023413          172 TLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKELQ------SIHWSAGAA-LPFFGYALAMFLFYS  242 (282)
Q Consensus       172 ~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~  242 (282)
                      -.-++....++|..+.+  +..+++.+..+.+.+.+.....+ .+...+      ..+..+|.. ++-+...+++    .
T Consensus       182 ~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lf-TGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ----~  256 (337)
T KOG1580|consen  182 AMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLF-TGELWEFFYFVQRHPYVFWDLTLLAIASCLGQ----W  256 (337)
T ss_pred             HhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhhee-hhhHHHHHHHHHhccHHHHHHHHHHHHHHhhh----H
Confidence            99999999998876543  34567777777777665443322 111111      111111111 1112234444    3


Q ss_pred             HHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       243 ~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .++......++..-++...++-.++++.+.++++++++.
T Consensus       257 fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~  295 (337)
T KOG1580|consen  257 FIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG  295 (337)
T ss_pred             HHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH
Confidence            344566777777778888888999999999999999874

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.05  E-value=2.9e-09  Score=91.55  Aligned_cols=132  Identities=11%  Similarity=-0.091  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-c----CCcchhHHHHHHHHHHHH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVE   86 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~   86 (282)
                      ...|.++++.++++|+......|+..+ .  ++...+.++...+.+.+.++..... .    .+.++|......++++..
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~  224 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLPL-P--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSI  224 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCC-C--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHH
Confidence            356999999999999999999888764 2  2455677888888887777655432 1    223456666677777655


Q ss_pred             H-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           87 G-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        87 ~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      . ..++++++++.+++.++++.++.|++++++++++++|++++.+++|..+.+.|+.+...
T Consensus       225 ~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        225 IAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            5 77788999999999999999999999999999999999999999999999999988755

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.02  E-value=5e-09  Score=92.12  Aligned_cols=137  Identities=13%  Similarity=0.142  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcc------hhH--HHHHHHHH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKA------KWY--YYLILGLI   83 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~------~~~--~~~~~g~~   83 (282)
                      ...|..+.+.++++|+...+..|...++ ..++...+++...++.+...+.....++....      +..  ..+..++.
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~  265 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH
Confidence            3568899999999999999999887753 33445666676666665554443332211111      111  12223333


Q ss_pred             HHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecC
Q 023413           84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV  149 (282)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~  149 (282)
                      ......+.++++++.+++.+++..++.|+++.++++++++|++++.+++|.++++.|+++...++.
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            323366677999999999999999999999999999999999999999999999999999876443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.01  E-value=8e-09  Score=88.82  Aligned_cols=134  Identities=10%  Similarity=0.011  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc---CCcchhHHHHHHHHHHHHH-
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ---PLKAKWYYYLILGLIDVEG-   87 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~g~~~~~~-   87 (282)
                      ...|.++++.++++|+......|+..++  .+|.... +....+.+.+.++......   .+...+...+..|++.... 
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGAE--HGPATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcc--CCchHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHH
Confidence            3569999999999999999999988642  3454544 4445566666665554332   1122233345677776666 


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      +.++++++++.+++.++++.++.|+++.++++++++|+++..+++|.++++.|++......
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            6677899999999999999999999999999999999999999999999999998886543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.99  E-value=1e-08  Score=79.90  Aligned_cols=103  Identities=18%  Similarity=0.258  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCc
Q 023413           81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSP  160 (282)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  160 (282)
                      .++=...++.+..+++..++++++.+..+...++.+++++++|+|+.-.++++..+++.|++++...|..      ..+.
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~------~a~e  133 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE------HADE  133 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch------hhhh
Confidence            3333445999999999999999999999999999999999999999999999999999999999864433      4456


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023413          161 RKGDALVIAGATLYAVSNVSEEFLVKKAD  189 (282)
Q Consensus       161 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  189 (282)
                      +.|+..+..+++.-|+|.+.-|+...+.+
T Consensus       134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnAn  162 (290)
T KOG4314|consen  134 IIGIACAVGSAFMAALYKVLFKMFIGNAN  162 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            89999999999999999999998876655

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.96  E-value=1.6e-08  Score=80.31  Aligned_cols=239  Identities=12%  Similarity=0.040  Sum_probs=170.6

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHH
Q 023413           40 GINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT  118 (282)
Q Consensus        40 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~  118 (282)
                      |+.-.+...+.+.+++.+-++.+-+.|- .-+..+.++++..+.+.....+..-.+++|.++...++..++..+..+..+
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            5555567788888888877766544332 222445555666777666656666799999999999999999999999999


Q ss_pred             HHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhcc--cChhHHHHH
Q 023413          119 WIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKK--ADRIELMAF  196 (282)
Q Consensus       119 ~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~  196 (282)
                      .+++|.|.+-.+.....+.+..-+.-..+|.... .......+.|.+|+..-++.-+.+....|+..+-  ....+.++|
T Consensus       113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~-~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfY  191 (309)
T COG5070         113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS-AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFY  191 (309)
T ss_pred             HHHhcCccchhhHHHHHHHHHHHHHhccchhhHH-HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHH
Confidence            9999999999999999998888887777554321 1122244579999999999999999999988763  446788999


Q ss_pred             HHHHHHHHHHHHHHHHhhccccccccccc--h--hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHH
Q 023413          197 LGLFGGIISAVQISILERKELQSIHWSAG--A--ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRI  272 (282)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~  272 (282)
                      ..+.+..++.....++|..+..+..-+..  .  +..+.| ..+...- ++-.+..+...+...++...+.-.-..+.|.
T Consensus       192 nNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg-l~svgiS-y~saWcvrVtSSTtySMvGALNKlp~alaGl  269 (309)
T COG5070         192 NNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG-LCSVGIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGL  269 (309)
T ss_pred             hhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH-HHHhhhh-hccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence            99999999888877776543332221111  1  122222 1111111 2223456677777777877777888899999


Q ss_pred             HHhcccccC
Q 023413          273 GAYHEKVCK  281 (282)
Q Consensus       273 ~~~~E~~s~  281 (282)
                      ++|+|+.++
T Consensus       270 vffdap~nf  278 (309)
T COG5070         270 VFFDAPVNF  278 (309)
T ss_pred             hhcCCchhH
Confidence            999999875

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.92  E-value=1.7e-08  Score=86.87  Aligned_cols=130  Identities=15%  Similarity=0.055  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc----cCCcchhHHHHHHHHHHHHHH
Q 023413           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----QPLKAKWYYYLILGLIDVEGN   88 (282)
Q Consensus        13 ~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~   88 (282)
                      ..|.++++.++++|+...+..|+..++  .++.....   ..+.+.+.+.....+    ..+...+......|......+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHH
Confidence            458899999999999999999998643  23443322   222333333222222    122334544555554443347


Q ss_pred             HHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEee
Q 023413           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (282)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~  147 (282)
                      .++++++++.+++.++...+..|++..++++++++|+++..+++|.++++.|+.+....
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            78889999999999999999999999999999999999999999999999999887653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.87  E-value=2e-08  Score=85.80  Aligned_cols=131  Identities=19%  Similarity=0.186  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhhc-C-CCchHHHHHHHHHHHHHHHHHHHHhhc-c---CCcchhHHHHHHHHHHHH
Q 023413           13 LLGLGLGQFLSLLITSTGFSSSELARK-G-INAPTSQSFFNYVLLAIVYGSLMLYRR-Q---PLKAKWYYYLILGLIDVE   86 (282)
Q Consensus        13 ~~g~~~~~~~a~~~~~~~~~~~~l~~~-~-~~~p~~~~~~r~~~~~l~l~~~~~~~~-~---~~~~~~~~~~~~g~~~~~   86 (282)
                      ..|..+++.++++|+......|...++ + ..+......+......+.+......++ +   ....++......+.+...
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  222 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIG  222 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHH
Confidence            457778888999999888877765321 1 011122233333333222222222121 1   112233333444444444


Q ss_pred             -HHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhccee
Q 023413           87 -GNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVT  143 (282)
Q Consensus        87 -~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l  143 (282)
                       .+.++++++++.+++.++...++.|++..+++++++||++++.+++|..+++.|+.+
T Consensus       223 l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       223 GAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence             477888999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.87  E-value=4.8e-08  Score=84.25  Aligned_cols=137  Identities=12%  Similarity=0.041  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCC-chHHHHHHHHHHHHHHHHHHHHh-hc---------cCCcchhHHHHHH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGIN-APTSQSFFNYVLLAIVYGSLMLY-RR---------QPLKAKWYYYLIL   80 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~-~p~~~~~~r~~~~~l~l~~~~~~-~~---------~~~~~~~~~~~~~   80 (282)
                      ...|..+++.++++|+......|+..++... .......+....+.+........ .+         ..+...+...+..
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            3579999999999999999999997653222 22233344444443333222111 11         1223446566677


Q ss_pred             HHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           81 GLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        81 g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      |++.... ..++++++++.+++.++.+..+.|++..++++++++|+++..+++|..+++.|+++...++
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            7777766 6667799999999999999999999999999999999999999999999999998876533

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.87  E-value=7.1e-08  Score=74.64  Aligned_cols=129  Identities=19%  Similarity=0.186  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHhhhc-----CCCchHHHHHHHHHHHHHHHHHHHHhhcc-----------C-----Ccch
Q 023413           15 GLGLGQFLSLLITSTGFSSSELARK-----GINAPTSQSFFNYVLLAIVYGSLMLYRRQ-----------P-----LKAK   73 (282)
Q Consensus        15 g~~~~~~~a~~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-----------~-----~~~~   73 (282)
                      |+++++.+.++.+..++..|+..++     ...+|.....+....+.+++.+.....+.           .     ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6778889999999999999998887     57889999999999999998887665330           0     1122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhccee
Q 023413           74 WYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVT  143 (282)
Q Consensus        74 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l  143 (282)
                      +...+..|++....++..+..++++++...+++.....+.+.+++.++++|+++.+++.|+.+++.|+.+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            3344566677777799999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.82  E-value=2e-08  Score=82.16  Aligned_cols=251  Identities=14%  Similarity=0.125  Sum_probs=173.8

Q ss_pred             hhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cCCcchhHHHHHHHHHHHHHHHHHHHHhhc-cchhhHhhhcc
Q 023413           31 FSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQY-TSLTSVMLLDC  108 (282)
Q Consensus        31 ~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~~l~~  108 (282)
                      ++...+.+++......+++.++++-+.--+++--+.. .+++.+.+.+...-...+..+.+.++++++ .+...-.+..+
T Consensus        20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs   99 (330)
T KOG1583|consen   20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS   99 (330)
T ss_pred             HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence            3444555544444567888888777654444331111 334455666665555555559999999999 77788888888


Q ss_pred             chhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCC------CC---CCCc--chhHHHHHHHHHHHHHH
Q 023413          109 WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDR------GS---GSSP--RKGDALVIAGATLYAVS  177 (282)
Q Consensus       109 ~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~------~~---~~~~--~~G~~~~l~a~~~~a~~  177 (282)
                      ..++.++++++++.|+|.+.+|+.++++.-+|+++....+..+..+      .+   ++..  ..|+.+...+-+.-|..
T Consensus       100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999998754443221      11   1111  25888888888889999


Q ss_pred             HHHHHHhhccc--ChhHHHHHHHHHHHHHHHHHHH-H-------Hhhcc--ccccccc-cchhHHHHHHHHHHHHHHHHH
Q 023413          178 NVSEEFLVKKA--DRIELMAFLGLFGGIISAVQIS-I-------LERKE--LQSIHWS-AGAALPFFGYALAMFLFYSFV  244 (282)
Q Consensus       178 ~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  244 (282)
                      .+.+++..|++  |+-+.++|....+....+...- +       .....  .+..... +..+..+++..+.++....+.
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgV  259 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGV  259 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhh
Confidence            99998777654  5889999999988877643310 0       00010  0111111 222344555677777776777


Q ss_pred             HHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       245 ~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..+....++..+++...++-.++.+++...|++++++
T Consensus       260 y~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~  296 (330)
T KOG1583|consen  260 YILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTP  296 (330)
T ss_pred             hhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCH
Confidence            7777777888888888889999999999999998875

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.81  E-value=1.1e-07  Score=77.81  Aligned_cols=244  Identities=14%  Similarity=0.137  Sum_probs=171.1

Q ss_pred             hhhhHHhhhc-CCC-chHHHHHHHHHHHHHHHHHHHH-hhccCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhh
Q 023413           30 GFSSSELARK-GIN-APTSQSFFNYVLLAIVYGSLML-YRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLL  106 (282)
Q Consensus        30 ~~~~~~l~~~-~~~-~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l  106 (282)
                      +..-.+..+. |+. -.+.+++.++.+-..+-+.-+. ++.++...+|+.+..++.+..+.+.+..-|+.|..-..-.+.
T Consensus        59 Gy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviF  138 (367)
T KOG1582|consen   59 GYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIF  138 (367)
T ss_pred             HHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHHH
Confidence            4444445554 443 3466777777766544444332 223556678999998888877778888889999888777788


Q ss_pred             ccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhc
Q 023413          107 DCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVK  186 (282)
Q Consensus       107 ~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~  186 (282)
                      ..+.-+-+++.+.++-++|.++....+..+...|.++....|....    +.-+..|+.+.-+|-++-|.-.-++++..+
T Consensus       139 KccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s----PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~  214 (367)
T KOG1582|consen  139 KCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS----PNFNLIGVMMISGALLADAVIGNVQEKAMK  214 (367)
T ss_pred             HhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC----CCcceeeHHHHHHHHHHHHHhhHHHHHHHh
Confidence            8888888999999999999999999999999999999988655422    334468999999999999998888888777


Q ss_pred             cc--ChhHHHHHHHHHHHHHHHHHHHHHhhccccc------cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 023413          187 KA--DRIELMAFLGLFGGIISAVQISILERKELQS------IHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNL  258 (282)
Q Consensus       187 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  258 (282)
                      ..  +..++.++....|.+.++........ -.+.      .++.  ......-..++.++.........+..++.+...
T Consensus       215 ~~~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~--tyGy~~~~s~~gylG~~~VLalI~~fGA~~aat  291 (367)
T KOG1582|consen  215 MNPASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVR--TYGYAFLFSLAGYLGIVFVLALIKLFGALIAAT  291 (367)
T ss_pred             hCCCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHh--HHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHH
Confidence            54  46778888888888887666533321 1111      1121  112211122233333334444567777777777


Q ss_pred             HhHHHHHHHHHHHHHHhccccc
Q 023413          259 SLLTSDMWAVLIRIGAYHEKVC  280 (282)
Q Consensus       259 ~~~~~pi~a~l~~~~~~~E~~s  280 (282)
                      ....+--+++++++++|.+++|
T Consensus       292 vTTaRKavTi~lSfllFsKPfT  313 (367)
T KOG1582|consen  292 VTTARKAVTILLSFLLFSKPFT  313 (367)
T ss_pred             HHHhHhHHHHHHHHHHHcCchH
Confidence            7777889999999999999876

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.79  E-value=3.1e-08  Score=73.59  Aligned_cols=105  Identities=24%  Similarity=0.261  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH---HHHHHHHHHHHHHHH
Q 023413          172 TLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGY---ALAMFLFYSFVPILL  248 (282)
Q Consensus       172 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  248 (282)
                      ++||.+.+..|+..++.|+.....+.+..+.+ ..+.....+..+....+.+.+....+.+.   ..++.++    .+..
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLY----FYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHH----HHHH
Confidence            47899999999999999999999999999997 55555444443323333433333333332   3444444    4456


Q ss_pred             HHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          249 KTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       249 ~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ++.++...+....++|+++.+++++++||++++
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~  108 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSW  108 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            777777888888888999999999999999985

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.77  E-value=5.1e-08  Score=84.22  Aligned_cols=135  Identities=13%  Similarity=0.105  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cC-Ccc---------h---hHH-
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP-LKA---------K---WYY-   76 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~-~~~---------~---~~~-   76 (282)
                      ...|.++++.++++|+......|+..+++..+|...+.+....+.+.+.|+....+ .. ...         .   ... 
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            45699999999999999999998877533456788899999888888888765432 11 010         0   111 


Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           77 YLILGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        77 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ....+...... +...+.+++++++..+++.....|+++.++++++++|+++..+++|..+++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            11222211222 44566899999999999999999999999999999999999999999999999988765

specificities overlap.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.76  E-value=2.4e-06  Score=74.10  Aligned_cols=166  Identities=13%  Similarity=0.071  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHH--HHHHHHHHHHHHHHHHhhc------cCCcchhHHHHHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQS--FFNYVLLAIVYGSLMLYRR------QPLKAKWYYYLILGL   82 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~--~~r~~~~~l~l~~~~~~~~------~~~~~~~~~~~~~g~   82 (282)
                      +...|++...+.++||+..+.-.|+ .++.+...++.+  ++..++.......+.. +.      ..+...+..-++.|+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~-~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWSVGGIFSWLILPWLIAALLL-PDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHhcCHHHHHHHHHHHH
Confidence            4578999999999999998888888 443322222221  1111111111111111 11      344555666677777


Q ss_pred             HHHHHHHHHHHHhhccchhhHhhhccchh-HHHHHHHHHHhhccc---c----hhhhhhHHHhhhcceeeEe----ecCC
Q 023413           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTI-PCVMFLTWIFLKTKY---R----YKKITGVVVCVAGLVTVIF----SDVH  150 (282)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p-~~~~il~~l~l~ek~---~----~~~~~g~~l~~~Gv~l~~~----~~~~  150 (282)
                      +=..++..++.++++.+++.+..+..-.- +...++..++++|-.   +    ....+|+++.++|+.+...    .|.+
T Consensus        82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~  161 (345)
T PRK13499         82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK  161 (345)
T ss_pred             HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            77777999999999999999988865544 458888888888643   2    2346788889999999876    3332


Q ss_pred             CCCC-CCCCCcchhHHHHHHHHHHHHHHH
Q 023413          151 AGDR-GSGSSPRKGDALVIAGATLYAVSN  178 (282)
Q Consensus       151 ~~~~-~~~~~~~~G~~~~l~a~~~~a~~~  178 (282)
                      ..++ ..+.+..+|+..++.+++.++.|+
T Consensus       162 ~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        162 MGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             cccccccccchHhHHHHHHHHHHHHHHHH
Confidence            2211 223456789999999999999999

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.67  E-value=5.4e-08  Score=79.62  Aligned_cols=235  Identities=11%  Similarity=0.079  Sum_probs=147.1

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhh-c-------cCCcch---hHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccc
Q 023413           41 INAPTSQSFFNYVLLAIVYGSLMLYR-R-------QPLKAK---WYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCW  109 (282)
Q Consensus        41 ~~~p~~~~~~r~~~~~l~l~~~~~~~-~-------~~~~~~---~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~  109 (282)
                      -..|...++.++++...+...+-... +       +....|   .+......+.........+++++|++++-..+-.++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            34689999999999887766654321 1       111112   223334444444444555699999999999999999


Q ss_pred             hhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHhhccc-
Q 023413          110 TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA-  188 (282)
Q Consensus       110 ~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~-  188 (282)
                      ..+|+.+++++++|+|-+..-..+..+++.|-.+=+.+++.     .+...+.|.+++..+.++-|+..+..||..... 
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~-----~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~  212 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS-----TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVG  212 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheeccccccc-----cCccchhhhHHHHHHHHHHHHHHHhhheeccccc
Confidence            99999999999999999999999999888886655543322     234557899999999999999999999755432 


Q ss_pred             C-hhHHHHHHHHHHHHHHHHHHHHHhh-ccccc--cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHH
Q 023413          189 D-RIELMAFLGLFGGIISAVQISILER-KELQS--IHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSD  264 (282)
Q Consensus       189 ~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~p  264 (282)
                      | -...+.|-.+.+.++.+|...+... .....  ..+..+.+....-.++..+..++....=++..++..-+++..-+-
T Consensus       213 ~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka  292 (347)
T KOG1442|consen  213 DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKA  292 (347)
T ss_pred             CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHH
Confidence            2 4567778788888877766533221 11111  112222222211111111111121111233444445555554555


Q ss_pred             HHHHHHHHHHhccccc
Q 023413          265 MWAVLIRIGAYHEKVC  280 (282)
Q Consensus       265 i~a~l~~~~~~~E~~s  280 (282)
                      ....+++..+++|.-+
T Consensus       293 ~aQTvlAv~~y~E~ks  308 (347)
T KOG1442|consen  293 AAQTVLAVAYYSETKS  308 (347)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            5666777777888654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.66  E-value=3.3e-07  Score=78.92  Aligned_cols=130  Identities=10%  Similarity=0.067  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cCCcch---hHHHHHHHHHHHHHHHHHHH
Q 023413           18 LGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAK---WYYYLILGLIDVEGNFLVVK   93 (282)
Q Consensus        18 ~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~---~~~~~~~g~~~~~~~~~~~~   93 (282)
                      .++.++++|+......|+..++....+...+.+-...+.....+...... .....+   +......|+.....+.++++
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~  232 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTA  232 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35566777777777766654322222233333333333332221111000 111111   22333445555455888889


Q ss_pred             HhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEee
Q 023413           94 AYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (282)
Q Consensus        94 al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~  147 (282)
                      ++++.+++.++++.+..|++..++++++++|++++.++.|..+++.|+.+...+
T Consensus       233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988877653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.62  E-value=8.3e-07  Score=78.21  Aligned_cols=133  Identities=10%  Similarity=0.058  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcC-----CCchHHHHHHHHHHHHHHHHHHHHhhcc----C-------C--cch
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKG-----INAPTSQSFFNYVLLAIVYGSLMLYRRQ----P-------L--KAK   73 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~-----~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~-------~--~~~   73 (282)
                      +..|.++++.++++|+..++..|++.++.     ..++.....+-...+.++++|+....+.    .       .  ...
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            46799999999999999999999988652     2345545555577788788877653220    0       0  001


Q ss_pred             hHHH---H-HHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413           74 WYYY---L-ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        74 ~~~~---~-~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      +...   + ..++.....+...+++++++++...++.....|+++.++++++++|+++..+++|.++++.|+++.
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            1111   1 112222222444457999999999999999999999999999999999999999999999998764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.61  E-value=3.5e-07  Score=78.44  Aligned_cols=130  Identities=12%  Similarity=0.023  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHH----HHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYV----LLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~   87 (282)
                      ..+|++.+++++++++......|...    .+|...++....    .+.++..++ .+.++...++.+..++.|++....
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIG  224 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHH
Confidence            36799999999999999888888753    456666544443    333333333 111222233444455678775444


Q ss_pred             HHHHHHHhh-ccchhhHhhhccchhHHHHHHHHHHhhcccchhhh----hhHHHhhhcceeeEe
Q 023413           88 NFLVVKAYQ-YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIF  146 (282)
Q Consensus        88 ~~~~~~al~-~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~----~g~~l~~~Gv~l~~~  146 (282)
                      +.+++.+.+ +.+++.++++.+..|+...+.+.+++||+.+++|+    +|.++.+.|+.+...
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            777889999 99999999999999999999999999999999999    999999999887643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.57  E-value=1.5e-06  Score=74.09  Aligned_cols=132  Identities=20%  Similarity=0.236  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHH-HHHHHHHHHHHHHHHhhc--cCCcchhHHHHHHHHHHHHH-
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSF-FNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEG-   87 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-   87 (282)
                      ...|..+++.++++|+......++.. +  .++..... +..........+......  +....++......|+++... 
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-R--LGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            56899999999999999898888876 2  22334444 333322222222222221  23345666777888887754 


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      +.+.+++++..+++.++.+.++.|++..++++++++|+++.++++|..+.+.|+.+...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            88888999999999999999999999999999999999999999999999999988765

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.57  E-value=2.2e-06  Score=66.21  Aligned_cols=119  Identities=19%  Similarity=0.189  Sum_probs=93.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc-------cChhHHHHHHHHHHHHHHHHHHHHHhhcccccccc---------ccch
Q 023413          163 GDALVIAGATLYAVSNVSEEFLVKK-------ADRIELMAFLGLFGGIISAVQISILERKELQSIHW---------SAGA  226 (282)
Q Consensus       163 G~~~~l~a~~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  226 (282)
                      |..+++.+.++.|++.+..|+..++       .|+.+...+....+.+.+.+.....|..+......         +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999987655       45889999999999999988877777654221111         1122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ...+...+...+.++.......+..++...++....+.+..++.|++++||++|+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~  135 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP  135 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH
Confidence            2333334566677788888899999999999999999999999999999999885

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.56  E-value=1.8e-07  Score=68.17  Aligned_cols=66  Identities=14%  Similarity=0.077  Sum_probs=58.2

Q ss_pred             HHHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeE
Q 023413           80 LGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI  145 (282)
Q Consensus        80 ~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~  145 (282)
                      .+.++... .++...+++..|.+.+..+.++.|+++.+++++++|||++++|++|+.+++.|++++.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33354555 6666799999999999999999999999999999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.55  E-value=1.6e-06  Score=74.35  Aligned_cols=123  Identities=15%  Similarity=0.159  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHH-HH
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVE-GN   88 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~   88 (282)
                      ++...|+.+++.++++-+......|+-.++....+.     |--           .++++..++..|  ..|..... +.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~-----~~~-----------~~~~~~l~~~~W--~~G~~~~~~g~   64 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSL-----RAG-----------SGGRSYLRRPLW--WIGLLLMVLGE   64 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----ccc-----------chhhHHHhhHHH--HHHHHHHhcch
Confidence            456789999999888888777777666554211110     000           000111122223  33433333 37


Q ss_pred             HHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCC
Q 023413           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVH  150 (282)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~  150 (282)
                      .+.+.|+.+.|.+..+++....-++..+++..++|||++++++.|..+++.|..++...+++
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~  126 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK  126 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC
Confidence            77789999999999999999999999999999999999999999999999999988764443

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.50  E-value=1.9e-06  Score=62.60  Aligned_cols=115  Identities=16%  Similarity=0.054  Sum_probs=81.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccc-cccccccchhHHHHH--HHHHHHH
Q 023413          163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKEL-QSIHWSAGAALPFFG--YALAMFL  239 (282)
Q Consensus       163 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~  239 (282)
                      ...+++++++++++..+..|-..++.||...+..........+..+.......+. ..++...+..+.+.|  .+.+..+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~   83 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998888887777655433322211 123444555555555  3555555


Q ss_pred             HHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      |+.+    .+..+++.+....-++|+++++++++++||++|.
T Consensus        84 Yf~A----Lk~G~as~VvPldk~svvl~~lls~lfL~E~ls~  121 (140)
T COG2510          84 YFRA----LKKGKASRVVPLDKTSVVLAVLLSILFLGERLSL  121 (140)
T ss_pred             HHHH----HhcCCcceEEEcccccHHHHHHHHHHHhcCCCCH
Confidence            5554    4444444444444555999999999999999984

>TIGR00803 nst UDP-galactose transporter

Probab=98.43  E-value=7.6e-06  Score=67.45  Aligned_cols=172  Identities=11%  Similarity=0.044  Sum_probs=89.4

Q ss_pred             hhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcc--------------------eeeEeecCCCCCCCCCCCcchh
Q 023413          104 MLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGL--------------------VTVIFSDVHAGDRGSGSSPRKG  163 (282)
Q Consensus       104 ~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv--------------------~l~~~~~~~~~~~~~~~~~~~G  163 (282)
                      ....+..++++++.++...+||.++.|+++.++...|+                    .....++..+ ......+...|
T Consensus         8 ~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~-~~~~~g~~~~g   86 (222)
T TIGR00803         8 IIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA-KTLMFGNPVVG   86 (222)
T ss_pred             HHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc-cccccccHHHH
Confidence            34444555555555555555555555555555544444                    4443211110 01112244678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccChh-HHHHHHH-HHHHHHHHHHHHHHhh-cccccc----ccccchhHHHHHHHHH
Q 023413          164 DALVIAGATLYAVSNVSEEFLVKKADRI-ELMAFLG-LFGGIISAVQISILER-KELQSI----HWSAGAALPFFGYALA  236 (282)
Q Consensus       164 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~  236 (282)
                      ....+.+.++-+...+..++..|+.+.. .....+. ..+.+..... ...+. ....+.    .++...+...+.....
T Consensus        87 ~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  165 (222)
T TIGR00803        87 LSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSV-LLWSDGTLISNFGFFIGYPTAVWIVGLLNVGG  165 (222)
T ss_pred             HHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHH-HhhcccchhhccCcccCCchHHHHHHHHHHhc
Confidence            8888888888889999999876654422 1111111 1222211111 11111 111111    1112222221111222


Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       237 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                          ........++.++...+....++++++.+++.++|||+++.
T Consensus       166 ----~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~  206 (222)
T TIGR00803       166 ----GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS  206 (222)
T ss_pred             ----CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence                23345577888888999999999999999999999999874

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00688 rarD rarD protein

Probab=98.42  E-value=8.3e-06  Score=68.72  Aligned_cols=117  Identities=10%  Similarity=0.146  Sum_probs=78.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhc-----cccccccccch-hHHHHHHHH
Q 023413          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERK-----ELQSIHWSAGA-ALPFFGYAL  235 (282)
Q Consensus       162 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~  235 (282)
                      +|..+.++++++|+...+..|. ..+.||.+..++.+..+.+.+.+........     .....+.+.+. .....+.. 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            5899999999999999999997 5679999999999999988775554332211     01111111111 12222221 


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                       ...++.......++.++...+...++.|+++.+++.+++||++++
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~  124 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR  124 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence             222233334455666666666777777999999999999999985

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.34  E-value=3.6e-08  Score=79.49  Aligned_cols=254  Identities=13%  Similarity=0.071  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cCCcchhHHHHHHHHHHHHHHHHHH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVV   92 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~   92 (282)
                      .+++.+++-++.|++...+..+..    ..|.+.+.---+-+.++...+.+... ....+.+..-++.|++=..++...+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qf   77 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQF   77 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhh
Confidence            356778899999999888777654    23555555444444433333333332 2233334344455555445577788


Q ss_pred             HHhhccchhhHhhhccchhHH-HHHHHHHHhhcccchhhh----hhHHHhhhcceeeEeecCCCCCCCCCCCcchhHHHH
Q 023413           93 KAYQYTSLTSVMLLDCWTIPC-VMFLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALV  167 (282)
Q Consensus        93 ~al~~~~~~~~~~l~~~~p~~-~~il~~l~l~ek~~~~~~----~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~~~  167 (282)
                      .|+++.+++.+.++..-.-+. +.+++.+.++|-.+..|.    +++++.+.|+++....|+++.+.++..+..+|....
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            999999999999998888777 888899999998887775    477788999999998776544444455567899999


Q ss_pred             HHHHHHHHHHHHHHHHhh-cccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 023413          168 IAGATLYAVSNVSEEFLV-KKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPI  246 (282)
Q Consensus       168 l~a~~~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (282)
                      +.+.+.|-.|.+..+... +..|..--.+..+..+++.+...   .+........|.+......-  +.+...+..+...
T Consensus       158 ~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~---~~~~~~~K~t~~nii~G~~W--a~GNl~ml~a~~~  232 (288)
T COG4975         158 LISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFF---KMEKRFNKYTWLNIIPGLIW--AIGNLFMLLAAQK  232 (288)
T ss_pred             eeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhc---ccccchHHHHHHHHhhHHHH--HhhHHHHHHhhhh
Confidence            999999999999887432 22334444445555555443211   11111112222222222211  2233333333333


Q ss_pred             HHHHhhHHHHHHHhHHHHHHHHHHHHHHhccccc
Q 023413          247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVC  280 (282)
Q Consensus       247 ~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s  280 (282)
                      .+...+=+..++.    .+.+.+-|.++++|+=|
T Consensus       233 ~GvAt~FSlSQlg----ViisTiGGIl~L~ekKt  262 (288)
T COG4975         233 VGVATSFSLSQLG----VIISTIGGILFLGEKKT  262 (288)
T ss_pred             hceeeeeeHhhhe----eeeeecceEEEEeccCc
Confidence            3333333333444    67788888899988744

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.21  E-value=3.1e-05  Score=57.82  Aligned_cols=71  Identities=20%  Similarity=0.297  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHH--HhhcccchhhhhhHHHhhhcceeeEee
Q 023413           77 YLILGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI--FLKTKYRYKKITGVVVCVAGLVTVIFS  147 (282)
Q Consensus        77 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l--~l~ek~~~~~~~g~~l~~~Gv~l~~~~  147 (282)
                      ++..|+..... ..+..++++..+++.+..+.+..+..+.+.++.  ++||++|++|++|+.+++.|++++..+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            45666666666 666779999999999999999998888888885  899999999999999999999998763

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.14  E-value=4.2e-05  Score=62.34  Aligned_cols=129  Identities=11%  Similarity=-0.005  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcch---hHHHHHHHHHHHHH-HH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAK---WYYYLILGLIDVEG-NF   89 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~g~~~~~~-~~   89 (282)
                      .|..+++..+.||+..-+..++..+  ..+.-.-+..-+.++.++.+|+-.-...+...+   ...-+..++++... +.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchH
Confidence            5888899999999988888888775  233456777888999999888765443222222   22335667777777 55


Q ss_pred             HHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413           90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      +-..+++..+....+++.++.|.+..+.++++++|++|..||.++..++.+..=.
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            6679999999999999999999999999999999999999999999988876633

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.06  E-value=6.7e-05  Score=64.88  Aligned_cols=133  Identities=18%  Similarity=0.215  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHh--hc---------cCCcchhHHHHHHHH
Q 023413           14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR---------QPLKAKWYYYLILGL   82 (282)
Q Consensus        14 ~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~---------~~~~~~~~~~~~~g~   82 (282)
                      .|+++..+..++-+..+..-+++.++...++.+..++-...+.+...+....  .+         ...+..+...+..++
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            3999999999999999999999998877788999999988888888776655  22         112233445567777


Q ss_pred             HHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ++..+..+.+.-.+..++...+++..+--+++.+++.+++++++++.+|.|+.+.+.|..+-..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            7777777777778999999999999999999999999999999999999999999999887654

; GO: 0055085 transmembrane transport

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.99  E-value=0.00011  Score=61.99  Aligned_cols=124  Identities=19%  Similarity=0.213  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH-H
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-N   88 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~   88 (282)
                      +++.+|.+++..+++.-+.+-..-|+-.++-     .....|.--+           +.+..+.  +....|.+.... .
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~-----~~~~~ra~~g-----------g~~yl~~--~~Ww~G~ltm~vGe   78 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRA-----GASGLRAGEG-----------GYGYLKE--PLWWAGMLTMIVGE   78 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHH-----hhhcccccCC-----------Ccchhhh--HHHHHHHHHHHHHh
Confidence            3456788888888877776666665544320     0011111000           0111122  223446655555 8


Q ss_pred             HHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCCC
Q 023413           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHA  151 (282)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~~  151 (282)
                      ...+-|+.+.|.+..+++-.++.+...+++..++|||+++...+|.+++++|-.+++...++.
T Consensus        79 i~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   79 IANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            888999999999999999999999999999999999999999999999999999998866553

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.95  E-value=0.00026  Score=61.53  Aligned_cols=139  Identities=14%  Similarity=0.053  Sum_probs=98.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHh--hc-----cCCcchhHHHHHHH
Q 023413            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR-----QPLKAKWYYYLILG   81 (282)
Q Consensus         9 ~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~-----~~~~~~~~~~~~~g   81 (282)
                      .++..+|=++++.++.+.+.+++.-+++.++  .++.....+=-+.+.++..+.+..  ++     +.+.+....++..+
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~  240 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA  240 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH
Confidence            3467899999999999999999999998864  345555555555555555554332  11     11222222222223


Q ss_pred             HHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecC
Q 023413           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV  149 (282)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~  149 (282)
                      ++.+..+.+.-..+++.++....+=..++.++.++.+.+++++++++..++|.++++.|.++....+.
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            32222233444778888888888777889999999999999999999999999999999999976443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.81  E-value=0.00034  Score=58.59  Aligned_cols=128  Identities=14%  Similarity=0.117  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHH-HHHHh-hccCCcchhHHHHHHHHHHHHH
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG-SLMLY-RRQPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~   87 (282)
                      ++..+|+...+.+++-+.....+-+..    +.+|....+=+ .++.++-. .+... +++...++.++-++.|++-..+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ig  208 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQ-AIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIG  208 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHH-HHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHH
Confidence            455778888888888887766666653    34555544433 22222222 22221 2222333344446778877777


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhh----hHHHhhhcce
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIT----GVVVCVAGLV  142 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~----g~~l~~~Gv~  142 (282)
                      +.+++.|.+..+.+.+-.+.++.+++..+.+.+++|||-+++++.    |+++.+.|.+
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999999999999999988764    5555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.63  E-value=0.00024  Score=52.18  Aligned_cols=68  Identities=18%  Similarity=0.183  Sum_probs=56.8

Q ss_pred             HHHHHHH-HHHHHHHhhccchhhHhhhc-cchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           81 GLIDVEG-NFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        81 g~~~~~~-~~~~~~al~~~~~~~~~~l~-~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      .+..... .+++..++++.|.+.+..+. ....+.+.+++.+++||++++.|++|+.+.+.|++.+-..+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3333444 66777999999999999886 47778899999999999999999999999999998886533

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.54  E-value=0.00053  Score=49.57  Aligned_cols=109  Identities=12%  Similarity=0.103  Sum_probs=76.9

Q ss_pred             HHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHhhccch
Q 023413           21 FLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSL  100 (282)
Q Consensus        21 ~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~  100 (282)
                      +.+++|+.++.+.|.-++..+...-. .  |..--...           ...+|++.+ -=+++..+...+++.+...+.
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~--~~~~~~~~-----------Ll~n~~y~i-pf~lNq~GSv~f~~~L~~~dl   67 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKAS-L--QLLQEIKF-----------LLLNPKYII-PFLLNQSGSVLFFLLLGSADL   67 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccch-H--HHHHHHHH-----------HHHhHHHHH-HHHHHHHHHHHHHHHHhcCCc
Confidence            46789999999999988763222211 1  21111111           123343333 223455668889999999999


Q ss_pred             hhHhhhc-cchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413          101 TSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus       101 ~~~~~l~-~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      +.+.++. ++.=++|.+.++++.+|..++++++|+.+++.|+.+.
T Consensus        68 SlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   68 SLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             eeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            9999995 6666779999988777888999999999999999875

Many members are annotated as potential transmembrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.54  E-value=0.0003  Score=50.95  Aligned_cols=66  Identities=17%  Similarity=0.310  Sum_probs=55.2

Q ss_pred             HHHHHHH-HHHHHHHhhccchhhHhhhcc-chhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           81 GLIDVEG-NFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        81 g~~~~~~-~~~~~~al~~~~~~~~~~l~~-~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      .+..... .+++..+++..|.+.+..+.. .....+.+.+++++||++++.|++|+.+.+.|++.+-.
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3344444 556679999999999988854 56777999999999999999999999999999999855

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.52  E-value=0.0003  Score=50.75  Aligned_cols=58  Identities=21%  Similarity=0.265  Sum_probs=50.3

Q ss_pred             HHHHHHHHhhccchhhHhhhccc-hhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413           87 GNFLVVKAYQYTSLTSVMLLDCW-TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~l~~~-~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      ..+++..++++.|.+.+-.+..- ....+.+.+.+++||++++.|++++.+.+.|+..+
T Consensus        48 sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         48 AFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            36677799999999998887764 44568999999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.49  E-value=0.00043  Score=49.61  Aligned_cols=59  Identities=10%  Similarity=0.074  Sum_probs=51.5

Q ss_pred             HHHHHHHhhccchhhHhhhcc-chhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           88 NFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~-~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      .+++..+++..|.+.+-.+.. .....+.+.+.+++||++++.|++++.+.+.|++.+-.
T Consensus        43 f~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         43 MALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            667779999999999888777 45566999999999999999999999999999988743

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.49  E-value=0.00029  Score=50.09  Aligned_cols=59  Identities=12%  Similarity=0.146  Sum_probs=51.2

Q ss_pred             HHHHHHHhhccchhhHhhhccchhHH-HHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPC-VMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~-~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ..++-.|+++.|.+.+..+-.-.-.. +.+.+++++||+.+..+++++.+.+.|++.+-.
T Consensus        44 f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          44 FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            66777999999999988776665544 899999999999999999999999999987744

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.47  E-value=6.5e-05  Score=61.77  Aligned_cols=132  Identities=13%  Similarity=0.087  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHh----hccCCcchhHHHHHHHHHHHHHH
Q 023413           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY----RRQPLKAKWYYYLILGLIDVEGN   88 (282)
Q Consensus        13 ~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~   88 (282)
                      ..|...++.+++..+...++.+++.|+.+.  ...+.+-..++.+...+.+..    ..+...+||+...-+|++++.++
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~--~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQ  267 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNAHA--IMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQ  267 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccccE--EEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHH
Confidence            345566666666677779999999876321  222233333333333332221    12667888888888999999999


Q ss_pred             HHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      .+...|+|.-.++-+++..++..++..+...++++|-+|++.|.|.++.+...+.+..
T Consensus       268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            9999999999999999999999999999999999999999999998877766555543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.42  E-value=0.0022  Score=53.70  Aligned_cols=120  Identities=16%  Similarity=0.143  Sum_probs=79.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhh-ccccccccccchhHHHHHHHHHHHH
Q 023413          161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILER-KELQSIHWSAGAALPFFGYALAMFL  239 (282)
Q Consensus       161 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
                      ..|+++++.+-+.|+.-..+.| ..+..++.++..+....+...+......... ++..+.-.+++....+...+.-...
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~   84 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL   84 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            4799999999999999999999 5688899999999999988887655444322 2222211222222222211111111


Q ss_pred             HHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      -+....+..++..+.-.++-.+..|++.+++|.+++||++|.
T Consensus        85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~  126 (293)
T COG2962          85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR  126 (293)
T ss_pred             HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH
Confidence            112223355666666677777778999999999999999985

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.36  E-value=0.00039  Score=59.77  Aligned_cols=136  Identities=11%  Similarity=0.112  Sum_probs=108.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhh--cCCCchHHHHHHHHHHHHHHHH-HHHHhhcc--C-------CcchhHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELAR--KGINAPTSQSFFNYVLLAIVYG-SLMLYRRQ--P-------LKAKWYYYL   78 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~--~-------~~~~~~~~~   78 (282)
                      -++.|+..+..+.+..+..+++.+.+.+  +...+++....+-...+...++ |+....+.  .       ..-+.....
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL  239 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence            4678999999999999999999999995  3456778888887788888888 77665431  1       111222334


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        79 ~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ..+++....|...+..+..+++-..++.....-.++...++++++|+.++.+..|..+++.|+++-..
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            44566666688889999999999999999999999999999999999999999999999999987643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.34  E-value=0.0049  Score=46.66  Aligned_cols=126  Identities=15%  Similarity=0.214  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc-----CCcchhHHHHHHHHHHHHHHHH
Q 023413           16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ-----PLKAKWYYYLILGLIDVEGNFL   90 (282)
Q Consensus        16 ~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~   90 (282)
                      +++++....+-+....+-..+.++ ..+|...++..+..+.+....+....++     ....+|+. ..-|.++...-.+
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~   80 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLS   80 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHH
Confidence            355666677777777777777764 2258999999999999888877765442     11233433 3467777776777


Q ss_pred             HHHHhhccchhhHhhhccchhHH-HHHHHHH----HhhcccchhhhhhHHHhhhccee
Q 023413           91 VVKAYQYTSLTSVMLLDCWTIPC-VMFLTWI----FLKTKYRYKKITGVVVCVAGLVT  143 (282)
Q Consensus        91 ~~~al~~~~~~~~~~l~~~~p~~-~~il~~l----~l~ek~~~~~~~g~~l~~~Gv~l  143 (282)
                      ...+....+++.+..+.-..-++ ..++..+    .-|+|++++|.+|+.+.+.|+.+
T Consensus        81 ~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   81 NIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            78999999998888877666665 5555553    34678999999999999999864

>TIGR00803 nst UDP-galactose transporter

Probab=97.30  E-value=0.0031  Score=51.87  Aligned_cols=65  Identities=15%  Similarity=0.243  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhccee
Q 023413           79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVT  143 (282)
Q Consensus        79 ~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l  143 (282)
                      ...+.+.....+....++|.+....+....+.++++.+++.++++|+++..++.|..+.+.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33444444466677999999999999999999999999999999999999999999999999764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.01  E-value=0.002  Score=45.27  Aligned_cols=50  Identities=14%  Similarity=0.137  Sum_probs=29.0

Q ss_pred             HHHHHHHhhccchhhHhhhcc-chhHHHHHHHHHHhhcccchhhhhhHHHh
Q 023413           88 NFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVC  137 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~-~~p~~~~il~~l~l~ek~~~~~~~g~~l~  137 (282)
                      .+++..++++.|.+.+-.+.. ...+.+.+.+..++||++|+.|+.|+.++
T Consensus        43 ~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   43 FYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            566679999999999977754 78888999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.92  E-value=0.0055  Score=51.61  Aligned_cols=137  Identities=13%  Similarity=0.124  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---------cCCcchhHHHHHH
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------QPLKAKWYYYLIL   80 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~   80 (282)
                      .+...|+.++...-+.=++++..-..+.++-..++....+.-.+...+.-...+...+         +..++-++..++.
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            3557888887777777788888888888775567788777766666666555554433         2334556677888


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      +.++..++.+.++-++.-++-.-+.+..+=-+++++++.+.++.++++.||.|+.+.+.|..+=..
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            999999988888788877777777777888899999999999999999999999999988876543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.43  E-value=0.025  Score=45.98  Aligned_cols=132  Identities=11%  Similarity=0.146  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc---------cCCcchhHHHHHHHHHHHHH
Q 023413           17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------QPLKAKWYYYLILGLIDVEG   87 (282)
Q Consensus        17 ~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~   87 (282)
                      ++.+++--.=+.++.+-..+............+.-.+.+.+.+..-+.+.+         .+.+..|+.+.++++.+..+
T Consensus       175 lLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LG  254 (337)
T KOG1580|consen  175 LLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLG  254 (337)
T ss_pred             HHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence            333333333344455544444332222344555555555555554443322         34456777888999999999


Q ss_pred             HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      +++.+.-..+-++-.-+++..+--.|+.+.+.++++..++.+||+|..+.+.|...=..++
T Consensus       255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            9999988888888888888889999999999999999999999999999999877655433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.35  E-value=0.055  Score=47.09  Aligned_cols=140  Identities=21%  Similarity=0.169  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhhc-CCCchHHHHHH-HHHHHHHHHHHHHH----hhc----cCCcchhHHHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFF-NYVLLAIVYGSLML----YRR----QPLKAKWYYYLIL   80 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~~-~~~~p~~~~~~-r~~~~~l~l~~~~~----~~~----~~~~~~~~~~~~~   80 (282)
                      +...|-++++++|++.+......|+-..+ |........+. =-++..+++.|.++    .+.    -|...+....+..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            56789999999999999877777665544 22222222221 12222233332222    221    2223334445677


Q ss_pred             HHHHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCC
Q 023413           81 GLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVH  150 (282)
Q Consensus        81 g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~  150 (282)
                      ++++... .++...|.-.+++-.+++-...+.+..++.-.++-++++++..++|...+++|-+.+...+..
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            7887777 999999999999999999999999999999999889999999999999999999998775443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.34  E-value=0.08  Score=44.22  Aligned_cols=127  Identities=13%  Similarity=0.115  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc--cCC----cchhHHHHHHHH-
Q 023413           10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPL----KAKWYYYLILGL-   82 (282)
Q Consensus        10 ~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~----~~~~~~~~~~g~-   82 (282)
                      .+...|+...+..+++-++.++...++.|++..+.+.....=+..+.++.++....++  +..    .+.+-.....-+ 
T Consensus       110 ~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~  189 (244)
T PF04142_consen  110 QNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIF  189 (244)
T ss_pred             chhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHH
Confidence            4567899999999999999999999999886665555555556666655555543332  111    112222222222 


Q ss_pred             HHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHH
Q 023413           83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVV  136 (282)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l  136 (282)
                      ....+..+.-.-++|.+...=......+.+++.+++..+++.+++....+|..+
T Consensus       190 ~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  190 LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            233334455588999998888888889999999999999999999988887653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.02  E-value=0.18  Score=36.54  Aligned_cols=42  Identities=17%  Similarity=0.223  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+..+....++.+.........+.++.+.++|+++|||++|+
T Consensus        50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~   91 (111)
T PRK15051         50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSP   91 (111)
T ss_pred             HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            334445566777777777776788999999999999999986

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.99  E-value=0.16  Score=37.94  Aligned_cols=101  Identities=18%  Similarity=0.062  Sum_probs=59.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHH
Q 023413          162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY  241 (282)
Q Consensus       162 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
                      .|.++.+.+.++-+.+++.-|+..++.+..+.... .    . ..... ..  +      ...+....+.+.++++..|.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~----~-~~~~~-~~--~------p~~~i~lgl~~~~la~~~w~   66 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F----I-AALLA-FG--L------ALRAVLLGLAGYALSMLCWL   66 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H----H-HHHHH-Hh--c------cHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999998877654332221 0    0 00000 00  0      00123333444566666665


Q ss_pred             HHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHH--HhcccccC
Q 023413          242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIG--AYHEKVCK  281 (282)
Q Consensus       242 ~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~--~~~E~~s~  281 (282)
                      ..    .+..+...........++...+.++.  ++||++|+
T Consensus        67 ~a----L~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~  104 (129)
T PRK02971         67 KA----LRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL  104 (129)
T ss_pred             HH----HHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            54    45555555554444457777777774  79999986

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=95.80  E-value=0.13  Score=37.37  Aligned_cols=42  Identities=19%  Similarity=0.320  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..+..++.+    .++.++ .......+.|+++.+++.+++||+++.
T Consensus        47 ~~~~~~~~a----~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~   88 (113)
T PF13536_consen   47 VAYLLFFYA----LSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSP   88 (113)
T ss_pred             HHHHHHHHH----HHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence            444444444    444443 444555667999999999999999875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.51  E-value=0.3  Score=42.78  Aligned_cols=137  Identities=13%  Similarity=0.045  Sum_probs=75.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHh-------hhhHHhhhcCCCchHHHHHHHHH---HHHHHHH-HHHH---hhccC----
Q 023413            8 WTKKTLLGLGLGQFLSLLITSTG-------FSSSELARKGINAPTSQSFFNYV---LLAIVYG-SLML---YRRQP----   69 (282)
Q Consensus         8 ~~~~~~~g~~~~~~~a~~~~~~~-------~~~~~l~~~~~~~p~~~~~~r~~---~~~l~l~-~~~~---~~~~~----   69 (282)
                      ++++..||++.++++.+..++.+       ..-+.....+.. |.....-.+.   .+..+.- .++.   .|+++    
T Consensus       168 ~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~  246 (345)
T PRK13499        168 EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLK  246 (345)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc
Confidence            34566899999998888877766       322222222433 3333333333   4443333 2222   12111    


Q ss_pred             -Ccc----hhHHH----HHHHHHHHHHHHHHHHHhhccchhhHhh---hc-cchhHHHHHHHHHHhhcccc------hhh
Q 023413           70 -LKA----KWYYY----LILGLIDVEGNFLVVKAYQYTSLTSVML---LD-CWTIPCVMFLTWIFLKTKYR------YKK  130 (282)
Q Consensus        70 -~~~----~~~~~----~~~g~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~p~~~~il~~l~l~ek~~------~~~  130 (282)
                       +++    ++.+-    .+-|++=...+.++..|-+..+...+..   +. ++..++..+.+. ++||+-+      +.-
T Consensus       247 ~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l  325 (345)
T PRK13499        247 ADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVL  325 (345)
T ss_pred             hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHH
Confidence             111    11222    3334443344666667777775554444   55 555577777777 5999877      444


Q ss_pred             hhhHHHhhhcceeeEe
Q 023413          131 ITGVVVCVAGLVTVIF  146 (282)
Q Consensus       131 ~~g~~l~~~Gv~l~~~  146 (282)
                      ++|+++.+.|..++..
T Consensus       326 ~~G~vliI~g~~lig~  341 (345)
T PRK13499        326 SLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            7788888888877754

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.27  E-value=0.38  Score=36.70  Aligned_cols=130  Identities=17%  Similarity=0.244  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc-cC-----CcchhHHHHHHHHHHHH
Q 023413           13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP-----LKAKWYYYLILGLIDVE   86 (282)
Q Consensus        13 ~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~-----~~~~~~~~~~~g~~~~~   86 (282)
                      ...++.++....+-...+.+-..+++. ..+|....+..+.++++.+..+.+.++ ++     .+.+|+. ..-|.++..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~-~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~-~~GG~lGa~   81 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARY-LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWA-WIGGLLGAI   81 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHH-HHccchhhh
Confidence            455677777888888888888888874 346889999999999888887766543 11     1223433 333444444


Q ss_pred             HHHHHHHHhhccchhhHhhhc-cchhHHHHHHHHHHh----hcccchhhhhhHHHhhhcceee
Q 023413           87 GNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFL----KTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~l~-~~~p~~~~il~~l~l----~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      .-..........+++....+. .-+-+..+++..+=.    +++++..+++|+++.++|+++.
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            333333555555555444433 333333444433211    3679999999999999995444

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.77  E-value=1.3  Score=33.44  Aligned_cols=53  Identities=17%  Similarity=0.004  Sum_probs=43.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccC-hhHHHHHHHHHHHHHHHHHHHHHhhc
Q 023413          163 GDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERK  215 (282)
Q Consensus       163 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (282)
                      ..++++.++.+-++....+.++.++.+ |.......+..+.+.+.+.....+..
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~   55 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP   55 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            357889999999999999999888765 99999999999999887776555543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.51  E-value=0.057  Score=45.03  Aligned_cols=131  Identities=13%  Similarity=0.128  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc--------cCC--cchhHHHHHHH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--------QPL--KAKWYYYLILG   81 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--------~~~--~~~~~~~~~~g   81 (282)
                      .+.|.++|.+++++-+.-.+..|+..-.-...-+.++++....+.++++|.+...+        +..  ..-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            47899999999999998888887655432233577889999999999999887644        111  12233344556


Q ss_pred             HHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcce
Q 023413           82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLV  142 (282)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~  142 (282)
                      ++++..++.-..=++.+++-.-.+=-.-....-.+++..+++|..+-..|-+-.+.+.|..
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~  323 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSL  323 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence            6665555544444555555433333333344556788888999988888877666655543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.01  E-value=0.43  Score=40.83  Aligned_cols=132  Identities=11%  Similarity=0.052  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhcc-----------CCcchhHHHHHHHHH
Q 023413           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ-----------PLKAKWYYYLILGLI   83 (282)
Q Consensus        15 g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-----------~~~~~~~~~~~~g~~   83 (282)
                      |+......-+.-+.-....|.-.+......+...++..+.+.+.+.......+.           .....+-...+.|++
T Consensus       158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~  237 (314)
T KOG1444|consen  158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM  237 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence            333333333333333344444333344456677888888888777766543321           112224456677788


Q ss_pred             HHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ++..+++.+...+..++...++.-...-..+.+-..++.+++.++...+|+.+++.|-.+-..
T Consensus       238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            888899999999999998888887555555667677777789999999999999988776544

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.06  E-value=5.6  Score=34.67  Aligned_cols=168  Identities=12%  Similarity=0.100  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc----------cCCcchhHHHHHH
Q 023413           11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLIL   80 (282)
Q Consensus        11 ~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~----------~~~~~~~~~~~~~   80 (282)
                      +...|++.-.+.+++-+..++-.|+..+  .  +++..+.-..+-.-+..|++.-.-          ..+.....+..+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--W--sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG--W--SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC--c--cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            3467888888888888888887777652  2  234333333333334455443211          2222344455666


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHhhh-ccchhHHHHHHHHHHhh-------cccchhhhhhHHHhhhcceeeEeecCCC-
Q 023413           81 GLIDVEGNFLVVKAYQYTSLTSVMLL-DCWTIPCVMFLTWIFLK-------TKYRYKKITGVVVCVAGLVTVIFSDVHA-  151 (282)
Q Consensus        81 g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~il~~l~l~-------ek~~~~~~~g~~l~~~Gv~l~~~~~~~~-  151 (282)
                      |++=..+...+-.+++|.+.+..+-+ ..+...+-.++-.++.+       ++-....++|+++.++|+.+....+... 
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            76655556667799999777655433 23333444444444433       2334567889999999999986532111 


Q ss_pred             ---CCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 023413          152 ---GDRGSGSSPRKGDALVIAGATLYAVSNVSEE  182 (282)
Q Consensus       152 ---~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~  182 (282)
                         +++.++.+..+|.+.++.+++.-|..++-.+
T Consensus       160 ~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  160 KELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             hhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence               1222445556899999999999888887654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=92.91  E-value=1.1  Score=38.21  Aligned_cols=133  Identities=19%  Similarity=0.146  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHhhhcC---CCchHHHHHHHHHHHHHHHHHHHHhhc------------cCCcc-hhH
Q 023413           12 TLLGLGLGQFLSLLITSTGFSSSELARKG---INAPTSQSFFNYVLLAIVYGSLMLYRR------------QPLKA-KWY   75 (282)
Q Consensus        12 ~~~g~~~~~~~a~~~~~~~~~~~~l~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~~------------~~~~~-~~~   75 (282)
                      +..|..+...++++-+.-+.+.+++.+++   ..+|....+--.....+.++|..+..+            ..+.. .++
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r  241 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR  241 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence            45688899999999999999999999873   356666666555555555555444322            11111 122


Q ss_pred             HHHHHHHHHHHH---HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceee
Q 023413           76 YYLILGLIDVEG---NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV  144 (282)
Q Consensus        76 ~~~~~g~~~~~~---~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~  144 (282)
                      ..-.+++.+...   -...+.=...++.-..++..-..-+.+.+++..+.+++++...|.|..++..|+.+-
T Consensus       242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            222222222222   222333344455555555555666779999999999999999999999999998877

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.67  E-value=3.6  Score=31.45  Aligned_cols=114  Identities=15%  Similarity=0.026  Sum_probs=66.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccC-hhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Q 023413          161 RKGDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL  239 (282)
Q Consensus       161 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
                      ....+.+++++.+-.+++-++.|+.+..+ |.......+..|++++.+...+.+..+......+..++...-|...+.+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence            46788899999999999999998888655 88888889999988887776564443222211221122221221111111


Q ss_pred             HHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHh
Q 023413          240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAY  275 (282)
Q Consensus       240 ~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~  275 (282)
                      . .......+...+........-+.+.+.+.+.+=+
T Consensus        84 t-~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~  118 (150)
T COG3238          84 T-SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGW  118 (150)
T ss_pred             h-hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            1 2222233344444444444556677777776543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=92.06  E-value=6.1  Score=33.17  Aligned_cols=127  Identities=15%  Similarity=0.062  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 023413           15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKA   94 (282)
Q Consensus        15 g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a   94 (282)
                      |++.+++++++++...+-.|.... +  +++..-++......+.-......++.+..  ..+-++-|.+=..+|.+..-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~-g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f--~p~amlgG~lW~~gN~~~vpi   75 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT-G--DGFFFQWVMCSGIFLVGLVVNLILGFPPF--YPWAMLGGALWATGNILVVPI   75 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC-C--CcHHHHHHHHHHHHHHHHHHHHhcCCCcc--eeHHHhhhhhhhcCceeehhH
Confidence            456677888888877777776653 3  34444443333332222222233332222  222345556655568888999


Q ss_pred             hhccchhhHhhhccchhHHHHHH-HHH-Hhhcc-----cchhhhhhHHHhhhcceeeEe
Q 023413           95 YQYTSLTSVMLLDCWTIPCVMFL-TWI-FLKTK-----YRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        95 l~~~~~~~~~~l~~~~p~~~~il-~~l-~l~ek-----~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      ++..+.+...++-.+.-.++--. +.+ +++++     -++..++|++++++|..+...
T Consensus        76 i~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen   76 IKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence            99999999999877755543322 222 33332     355668899999999887765

The region concerned is approximately 280 residues long.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.39  E-value=0.7  Score=38.73  Aligned_cols=124  Identities=10%  Similarity=0.167  Sum_probs=81.4

Q ss_pred             HHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc----------cCCcchhHHHHHHHHHHHHHHHHHHHHhh
Q 023413           27 TSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLILGLIDVEGNFLVVKAYQ   96 (282)
Q Consensus        27 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~al~   96 (282)
                      ++.+-.-....+....+....+++.+.++.+.++..+...+          +.+.+.....++.+..+..+......=++
T Consensus       203 A~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~  282 (367)
T KOG1582|consen  203 AVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIK  282 (367)
T ss_pred             HHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHH
Confidence            33444444444444445567778888888777776655433          22333444445555555554333333344


Q ss_pred             ccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeecCC
Q 023413           97 YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVH  150 (282)
Q Consensus        97 ~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~~~  150 (282)
                      .-++..++.+...--..|.+++.+++.++++-+..-+..+.+.|+++-..++.+
T Consensus       283 ~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n  336 (367)
T KOG1582|consen  283 LFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN  336 (367)
T ss_pred             HhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence            456666666666666889999999999999999999999999999998876543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=91.12  E-value=0.12  Score=42.52  Aligned_cols=77  Identities=21%  Similarity=0.291  Sum_probs=59.6

Q ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhh----hHHHhhhccee
Q 023413           68 QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIT----GVVVCVAGLVT  143 (282)
Q Consensus        68 ~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~----g~~l~~~Gv~l  143 (282)
                      ++..+.-..-+..|..-..+|..+++|.+..+.+.+--+.++..+...+-+.+++|||-+++++.    |+.+.+.|..+
T Consensus       203 ~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         203 KRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             cchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            33334444456778887777999999999999988888889999999999999999999999965    45555555544


Q ss_pred             e
Q 023413          144 V  144 (282)
Q Consensus       144 ~  144 (282)
                      +
T Consensus       283 l  283 (288)
T COG4975         283 L  283 (288)
T ss_pred             h
Confidence            4

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=90.50  E-value=6.9  Score=34.20  Aligned_cols=138  Identities=9%  Similarity=0.029  Sum_probs=88.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHhhc--cCCcc----hhHHHHHHHH
Q 023413            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKA----KWYYYLILGL   82 (282)
Q Consensus         9 ~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~----~~~~~~~~g~   82 (282)
                      ..+...|+...+...++.++.++...++.+++..+-+....-=+.++.++.+.-++..+  +...+    .|-.....-+
T Consensus       178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vV  257 (345)
T KOG2234|consen  178 AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVV  257 (345)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHH
Confidence            34567888888888888888999999998865544333333334555544444444332  11111    1223333333


Q ss_pred             HHHHH-HHHHHHHhhccchhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           83 IDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        83 ~~~~~-~~~~~~al~~~~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      +.... ..+.-.-.+|.+-..=..-.+.+.+++.+.+..+++.+++..-.+|..+.+..+.+-..
T Consensus       258 l~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  258 LLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             HHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence            33333 33333566676665555555678889999999999999999999999999988887763

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=90.36  E-value=4.4  Score=28.22  Aligned_cols=46  Identities=15%  Similarity=0.150  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHH-hHHHHHHHHHHHHHHhcccccC
Q 023413          232 GYALAMFLFYSFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      +.+.+++++..+    .++.+..+.... .-...+...+.|.++|||++|+
T Consensus        38 ~~~~s~~~l~~a----l~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~   84 (93)
T PF00893_consen   38 GYGLSFYFLSLA----LKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSL   84 (93)
T ss_dssp             HHHHHHHHHHHH----H-------HHHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHHHHHH----HhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            445555554443    344443333222 2244788899999999999986

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=88.79  E-value=2.1  Score=36.95  Aligned_cols=101  Identities=16%  Similarity=-0.001  Sum_probs=55.7

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Q 023413          159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMF  238 (282)
Q Consensus       159 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
                      +...|..+++.++++.+.+..++||..++.+....-.-..               ..+.- .+..||.....  .+.+..
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~---------------~~~~l-~~~~W~~G~~~--~~~g~~   65 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSG---------------GRSYL-RRPLWWIGLLL--MVLGEI   65 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccch---------------hhHHH-hhHHHHHHHHH--HhcchH
Confidence            4468999999999999999999998765433210000000               00000 01112211111  122222


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHHHHhcccccC
Q 023413          239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       239 ~~~~~~~~~~~~~~a~~~~~~~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ....    .....++.+.+......-+++.+++.+++||+++.
T Consensus        66 ~~~~----Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~  104 (300)
T PF05653_consen   66 LNFV----ALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR  104 (300)
T ss_pred             HHHH----HHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH
Confidence            1112    33444555555555555889999999999999874

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=88.65  E-value=2.7  Score=35.41  Aligned_cols=134  Identities=16%  Similarity=0.154  Sum_probs=87.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhHHhhhcCCCchHHHHHHHHHHHHHHHHHHHHh--------hc-c---------CC
Q 023413            9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--------RR-Q---------PL   70 (282)
Q Consensus         9 ~~~~~~g~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--------~~-~---------~~   70 (282)
                      ......|+.+..++.+.-+..++.-....++....+-...++--++....++....-        ++ +         +.
T Consensus       159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~v  238 (330)
T KOG1583|consen  159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKV  238 (330)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccc
Confidence            334567888888888888888999999998844446677777777666554433210        00 0         11


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcc----chhhHhhhccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           71 KAKWYYYLILGLIDVEGNFLVVKAYQYT----SLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        71 ~~~~~~~~~~g~~~~~~~~~~~~al~~~----~~~~~~~l~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      +..|..+    ++....++.+..+....    ++-.+++...+==.+..+++.+.++...+++.|+|..+.+.|..+-..
T Consensus       239 P~~~~yL----l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  239 PSMWVYL----LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             cHHHHHH----HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            1222222    22333355565555443    333444555556678889999999999999999999999999887654

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=87.84  E-value=7.7  Score=27.45  Aligned_cols=37  Identities=19%  Similarity=0.501  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEee
Q 023413          111 IPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (282)
Q Consensus       111 p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~  147 (282)
                      .....+..+.+-|.|+++..|+|..++++|+.++..+
T Consensus        69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~  105 (109)
T COG1742          69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG  105 (109)
T ss_pred             HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence            3446677888889999999999999999999888774

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=87.70  E-value=2.6  Score=34.39  Aligned_cols=98  Identities=13%  Similarity=0.116  Sum_probs=68.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCc--------ch-hHHHHHHHHHHHHHHHHHHHHhhccchhhHhhhccchhHHH
Q 023413           44 PTSQSFFNYVLLAIVYGSLMLYRRQPLK--------AK-WYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCV  114 (282)
Q Consensus        44 p~~~~~~r~~~~~l~l~~~~~~~~~~~~--------~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~  114 (282)
                      ...-.++..+.+..++..+-...+..++        .| .-...+.|++.++..++.-+..+-++.+..+.+-.+.-...
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~  264 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI  264 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence            4566777888887777766544331111        12 22556778888777888888888888888888877777777


Q ss_pred             HHHHHHHhhcccchhhhhhHHHhhhcc
Q 023413          115 MFLTWIFLKTKYRYKKITGVVVCVAGL  141 (282)
Q Consensus       115 ~il~~l~l~ek~~~~~~~g~~l~~~Gv  141 (282)
                      .+.+.++++|+.++..+.++.+++...
T Consensus       265 alaGlvffdap~nf~si~sillGflsg  291 (309)
T COG5070         265 ALAGLVFFDAPVNFLSIFSILLGFLSG  291 (309)
T ss_pred             HHhhhhhcCCchhHHHHHHHHHHHHHH
Confidence            788888888888877777777665443

>PRK02237 hypothetical protein; Provisional

Probab=87.51  E-value=5.2  Score=28.57  Aligned_cols=49  Identities=10%  Similarity=0.311  Sum_probs=36.2

Q ss_pred             cchhhHhhhccch-hHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEe
Q 023413           98 TSLTSVMLLDCWT-IPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF  146 (282)
Q Consensus        98 ~~~~~~~~l~~~~-p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~  146 (282)
                      .+.+.+-..+.-. .....+..+.+-|+|+++..++|..++++|+.++..
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence            3344444443333 333557789999999999999999999999988865

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=85.77  E-value=11  Score=26.91  Aligned_cols=112  Identities=12%  Similarity=0.032  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHhhhhHHhhhc----CCCchHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 023413           19 GQFLSLLITSTGFSSSELARK----GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKA   94 (282)
Q Consensus        19 ~~~~a~~~~~~~~~~~~l~~~----~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a   94 (282)
                      .+..+++|+.++.+.|.-+..    ++.+.....+.|=.-.              ...+|.+.+.. +++..++.+++.-
T Consensus         8 lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~t--------------l~l~w~Y~iPF-llNqcgSaly~~t   72 (125)
T KOG4831|consen    8 LVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKT--------------LFLNWEYLIPF-LLNQCGSALYYLT   72 (125)
T ss_pred             HHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHH--------------HHHhHHHHHHH-HHHHhhHHHHHHH
Confidence            456789999999999887754    2222122222221111              11223333322 3344457788888


Q ss_pred             hhccchhhHhhhccchh-HHHHHHHHHHhhcccchhhhhhHHHhhhcceeeE
Q 023413           95 YQYTSLTSVMLLDCWTI-PCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI  145 (282)
Q Consensus        95 l~~~~~~~~~~l~~~~p-~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~  145 (282)
                      +++.+.+.+..+.+... .++.+.+..+-.|...++.+.|..+.+.|..+.+
T Consensus        73 La~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   73 LASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            99999998888766644 5688888864445566777889999999987764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.55
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.42
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.67
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.02

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.55  E-value=1.7e-07  Score=67.20  Aligned_cols=69  Identities=16%  Similarity=0.294  Sum_probs=60.1

Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhhHhhh-ccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEee
Q 023413           79 ILGLIDVEG-NFLVVKAYQYTSLTSVMLL-DCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS  147 (282)
Q Consensus        79 ~~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~  147 (282)
                      ..+.+.... .+++.+++++.|.+.+..+ ..+.|+.+.+++.+++||++++.|++|+.+++.|++++...
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344444444 6677799999999999999 79999999999999999999999999999999999998663

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.42  E-value=2.1e-07  Score=69.22  Aligned_cols=70  Identities=16%  Similarity=0.292  Sum_probs=49.7

Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhhHhhh-ccchhHHHHHHHHHHhhcccchhhhhhHHHhhhcceeeEeec
Q 023413           79 ILGLIDVEG-NFLVVKAYQYTSLTSVMLL-DCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD  148 (282)
Q Consensus        79 ~~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~p~~~~il~~l~l~ek~~~~~~~g~~l~~~Gv~l~~~~~  148 (282)
                      +.+++.... .+++.+++++.+++.+..+ ..+.|+++.++++++++|++++.|++|+.+++.|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            345544444 7777899999999999999 899999999999999999999999999999999999986543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.67  E-value=0.0059  Score=45.06  Aligned_cols=48  Identities=10%  Similarity=0.084  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hHHHHHHHHHHHHHHhcccccC
Q 023413          230 FFGYALAMFLFYSFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      ..++++++++++.+    .+..+....... ..+.|+++.+++++++||++|+
T Consensus        37 i~~~~ls~~l~~~a----lk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~   85 (137)
T 2i68_A           37 IICYCASFWLLAQT----LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL   85 (137)
T ss_dssp             HHHHHHHHHHHHHH----HC-----CHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHH----HHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            34455665555444    555555544444 5566999999999999999986

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.02  E-value=0.048  Score=38.50  Aligned_cols=45  Identities=11%  Similarity=0.099  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHH-hHHHHHHHHHHHHHHhcccccC
Q 023413          233 YALAMFLFYSFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVCK  281 (282)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pi~a~l~~~~~~~E~~s~  281 (282)
                      .+.+++++    .+..++.+...+... .-+.|+.+.+.+++++||++|+
T Consensus        40 ~~~~~~~~----~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~   85 (110)
T 3b5d_A           40 YCASFWLL----AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL   85 (110)
T ss_pred             HHHHHHHH----HHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCH
Confidence            44444444    335566666665555 5667999999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00