Citrus Sinensis ID: 023423

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MASTTTPSISLQSNSSRTSFLSSPGPKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
cccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccHHHHHHHHHccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHcccccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEccccccc
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccEEEccEEEcccHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHccHccccEEEEEEccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccEEcccHHHHHHHHHHHHHHHHccccccccccccccccccHccEEEEc
mastttpsislqsnssrtsflsspgpkcpkpfqitglklpflshsikfthvkssvtdkynevvVDEEMDRIRRLqngsdvrgvalegekgrtvdltPSAVEAIAESFGEWVIRSLenergrpvedvkvslgkdprvsgpslSVAVFAGLARAGCLvfdmglattpacfmstllppfaydasimmtashlpytrnglkfftkkggltspvvEDICGEAARKFANRLTKVStvlrnpptrvdFMSTYAKHLRDVIKErvnhplhyetplkgfqvpfFTSLFVSY
mastttpsislqsnssrtsfLSSPGPKCPKPFQITGLKLPFLSHSIKFthvkssvtdkynevVVDEEMdrirrlqngsdvrgvalegekgrtvdltpsAVEAIAESFGEWVIrslenergrpvedvkvslgkdprvsgpSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANrltkvstvlrnpptrvdFMSTYAKHLRDVIKERVNHPLhyetplkgfqvpfFTSLFVSY
MASTTTPSISLQSNSSRTSFLSSPGPKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
*******************************FQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRR********GVAL******TVDLTPSAVEAIAESFGEWVIRSL************************SLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFV**
**************************************LPFLSHSIKF*********************RIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLE******VEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKF**************PTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
*************************PKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
**********************S*GPKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASTTTPSISLQSNSSRTSFLSSPGPKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDKYNEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
A6W5X2 454 Phosphoglucosamine mutase yes no 0.574 0.356 0.338 4e-13
B9MMU5 449 Phosphoglucosamine mutase yes no 0.432 0.271 0.344 2e-11
A4XH45 449 Phosphoglucosamine mutase yes no 0.297 0.187 0.418 3e-11
B0KD39 447 Phosphoglucosamine mutase no no 0.436 0.275 0.378 5e-11
B0K5X4 447 Phosphoglucosamine mutase no no 0.436 0.275 0.378 5e-11
Q6A6T5 450 Phosphoglucosamine mutase yes no 0.478 0.3 0.333 8e-11
Q47LM7 449 Phosphoglucosamine mutase yes no 0.329 0.207 0.431 8e-11
Q18CL0 448 Phosphoglucosamine mutase no no 0.269 0.169 0.423 9e-11
Q03VW4 455 Phosphoglucosamine mutase yes no 0.404 0.250 0.359 9e-11
B1N017 455 Phosphoglucosamine mutase yes no 0.432 0.268 0.357 1e-10
>sp|A6W5X2|GLMM_KINRD Phosphoglucosamine mutase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=glmM PE=3 SV=1 Back     alignment and function desciption
 Score = 75.5 bits (184), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 80/180 (44%), Gaps = 18/180 (10%)

Query: 73  RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGK 132
           RL     VRG+A        VDLT      +A +    ++    N   R +      + +
Sbjct: 3   RLFGTDGVRGLA-------NVDLTADMALGLAVAAASVLVEPGGNAHPRAL------VAR 49

Query: 133 DPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYT 192
           DPR SG  LS AV AGLA AG  V D+G+  TPA  ++ L+     D  +M++ASH P  
Sbjct: 50  DPRASGEFLSAAVVAGLASAGVDVLDIGVVPTPA--LAHLVDTSGADFGVMLSASHNPMP 107

Query: 193 RNGLKFFTKKGGLTSPVVEDICGEAARKFANRL---TKVSTVLRNPPTRVDFMSTYAKHL 249
            NGLK F + G      VED+   A R+   R      V  V   P    D   TY  HL
Sbjct: 108 DNGLKIFARGGTKLPDDVEDVVERAYREGGGRRPTGAAVGRVHGGPDVEQDAQDTYVAHL 167
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.
Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) (taxid: 266940)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 0
>sp|B9MMU5|GLMM_CALBD Phosphoglucosamine mutase OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|A4XH45|GLMM_CALS8 Phosphoglucosamine mutase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|B0KD39|GLMM_THEP3 Phosphoglucosamine mutase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|B0K5X4|GLMM_THEPX Phosphoglucosamine mutase OS=Thermoanaerobacter sp. (strain X514) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|Q6A6T5|GLMM_PROAC Phosphoglucosamine mutase OS=Propionibacterium acnes (strain KPA171202 / DSM 16379) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|Q47LM7|GLMM_THEFY Phosphoglucosamine mutase OS=Thermobifida fusca (strain YX) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|Q18CL0|GLMM_CLOD6 Phosphoglucosamine mutase OS=Clostridium difficile (strain 630) GN=glmM PE=3 SV=2 Back     alignment and function description
>sp|Q03VW4|GLMM_LEUMM Phosphoglucosamine mutase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=glmM PE=3 SV=1 Back     alignment and function description
>sp|B1N017|GLMM_LEUCK Phosphoglucosamine mutase OS=Leuconostoc citreum (strain KM20) GN=glmM PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
255573758 620 phosphoglucomutase, putative [Ricinus co 0.957 0.435 0.783 1e-117
225424281 617 PREDICTED: phosphomannomutase/phosphoglu 0.950 0.434 0.761 1e-114
356576034 619 PREDICTED: phosphomannomutase/phosphoglu 0.950 0.432 0.708 1e-108
357475239 621 Phosphoglucosamine mutase [Medicago trun 0.943 0.428 0.701 1e-105
224101859 554 predicted protein [Populus trichocarpa] 0.726 0.370 0.829 4e-99
15223252 615 phosphoglucomutase-like protein [Arabido 0.936 0.429 0.661 1e-94
297838899 615 hypothetical protein ARALYDRAFT_476213 [ 0.936 0.429 0.669 1e-94
449522169 575 PREDICTED: phosphomannomutase/phosphoglu 0.723 0.354 0.732 1e-89
449466867 616 PREDICTED: phosphomannomutase/phosphoglu 0.723 0.331 0.732 2e-89
534982 583 phosphoglucomutase [Spinacia oleracea] 0.737 0.356 0.712 2e-84
>gi|255573758|ref|XP_002527800.1| phosphoglucomutase, putative [Ricinus communis] gi|223532835|gb|EEF34610.1| phosphoglucomutase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/273 (78%), Positives = 235/273 (86%), Gaps = 3/273 (1%)

Query: 1   MASTTTPSISLQSNSSRTSFLSSPGPKCPKPFQITGLKLPFLSHSI-KFTHVKSSVTDKY 59
           MA T T SISLQ+N   TSF S P     KPFQ   +K  F   ++ K T +KSS T KY
Sbjct: 1   MAHTATSSISLQNNVPNTSFKSPPSLPT-KPFQ-NNIKFSFPPLTLTKVTRIKSSRTTKY 58

Query: 60  NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENER 119
           NEV+VDEEMD++RRLQNGSDVRGVALEGEKGRTVDLTP AVEAIAESFGEWVI  LE E+
Sbjct: 59  NEVIVDEEMDKVRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAIAESFGEWVINGLEKEK 118

Query: 120 GRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYD 179
           GR VEDV+VSLGKDPRV+G SLSVAVFAGL+RAGC+VFDMGLATTPACFMSTLL PFAYD
Sbjct: 119 GRVVEDVRVSLGKDPRVTGASLSVAVFAGLSRAGCMVFDMGLATTPACFMSTLLHPFAYD 178

Query: 180 ASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPPTRV 239
           ASIMMTASHLPYTRNGLKFFTKKGGLTSP VE+IC +AARK+ANRL KVST+L  PPTRV
Sbjct: 179 ASIMMTASHLPYTRNGLKFFTKKGGLTSPEVEEICEKAARKYANRLMKVSTLLNTPPTRV 238

Query: 240 DFMSTYAKHLRDVIKERVNHPLHYETPLKGFQV 272
           DFMSTYAKHLRD+IKERV+HPLHY+TPLKGFQ+
Sbjct: 239 DFMSTYAKHLRDIIKERVSHPLHYDTPLKGFQI 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225424281|ref|XP_002280911.1| PREDICTED: phosphomannomutase/phosphoglucomutase [Vitis vinifera] gi|297737677|emb|CBI26878.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576034|ref|XP_003556140.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Glycine max] Back     alignment and taxonomy information
>gi|357475239|ref|XP_003607905.1| Phosphoglucosamine mutase [Medicago truncatula] gi|355508960|gb|AES90102.1| Phosphoglucosamine mutase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224101859|ref|XP_002312448.1| predicted protein [Populus trichocarpa] gi|222852268|gb|EEE89815.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15223252|ref|NP_177239.1| phosphoglucomutase-like protein [Arabidopsis thaliana] gi|5902394|gb|AAD55496.1|AC008148_6 Putative phosphoglucomutase [Arabidopsis thaliana] gi|20260528|gb|AAM13162.1| putative phosphoglucomutase [Arabidopsis thaliana] gi|30725426|gb|AAP37735.1| At1g70820 [Arabidopsis thaliana] gi|332196999|gb|AEE35120.1| phosphoglucomutase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297838899|ref|XP_002887331.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] gi|297333172|gb|EFH63590.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449522169|ref|XP_004168100.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449466867|ref|XP_004151147.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|534982|emb|CAA53507.1| phosphoglucomutase [Spinacia oleracea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2014025 615 AT1G70820 "AT1G70820" [Arabido 0.932 0.427 0.666 5.3e-88
UNIPROTKB|Q69TT2 625 OSJNBa0026P23.2-1 "Os06g047620 0.744 0.336 0.676 1.6e-70
UNIPROTKB|Q7XHZ2 543 P0475E07.126 "Putative phospho 0.687 0.357 0.384 6.2e-30
UNIPROTKB|A8J352 503 CHLREDRAFT_119219 "Predicted p 0.677 0.379 0.421 1.1e-28
UNIPROTKB|Q9RSQ3 444 glmM "Phosphoglucosamine mutas 0.485 0.308 0.382 8.1e-09
UNIPROTKB|Q4K3S1 465 algC "Phosphomannomutase/phosp 0.528 0.320 0.295 1.2e-08
UNIPROTKB|Q88BD4 465 algC "Phosphomannomutase/phosp 0.542 0.329 0.288 5.7e-08
UNIPROTKB|O34824 448 glmM "Phosphoglucosamine mutas 0.390 0.245 0.367 9.2e-08
UNIPROTKB|A6VEC9 868 algC "Phosphomannomutase AlgC" 0.652 0.211 0.274 1.5e-07
TIGR_CMR|BA_0157 448 BA_0157 "phosphoglucosamine mu 0.390 0.245 0.367 2e-07
TAIR|locus:2014025 AT1G70820 "AT1G70820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 184/276 (66%), Positives = 213/276 (77%)

Query:     1 MASTTTPSISLQSNS-SRTSFLSS-PGPKCPKPFQITGLKLPFLSHSIKFTHVKSSVTDK 58
             MAST+T S+       S+T+  SS PG    + F    L     S S+K   ++SS   K
Sbjct:     1 MASTSTSSLMASKTVISKTALFSSLPGI-VSRSF----LTFAPASPSVKPLRIRSSNVTK 55

Query:    59 YNEVV--VDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLE 116
             ++EV   +DE+MD+IRRLQNGSDVRGVALEGEKGRTVDLTP+AVEAIAESFGEWV  +  
Sbjct:    56 FDEVTNSLDEDMDQIRRLQNGSDVRGVALEGEKGRTVDLTPAAVEAIAESFGEWVAATES 115

Query:   117 NERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPF 176
             N  G     +K+SLG+DPRVSG  LS AVFAGLARAGCL FDMGLATTPACFMSTLL PF
Sbjct:   116 NGNGV----IKISLGRDPRVSGGKLSTAVFAGLARAGCLAFDMGLATTPACFMSTLLSPF 171

Query:   177 AYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKFANRLTKVSTVLRNPP 236
              YDASIMMTASHLPYTRNGLKFFTK+GGLTSP VE IC  AARK+A R TKVST++R  P
Sbjct:   172 EYDASIMMTASHLPYTRNGLKFFTKRGGLTSPEVEKICDLAARKYATRQTKVSTLIRTRP 231

Query:   237 TRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQV 272
              +VDFMS Y+KHLR++IKER+NHP HY+TPLKGFQ+
Sbjct:   232 QQVDFMSAYSKHLREIIKERINHPEHYDTPLKGFQI 267
GO:0004610 "phosphoacetylglucosamine mutase activity" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0006048 "UDP-N-acetylglucosamine biosynthetic process" evidence=IBA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016868 "intramolecular transferase activity, phosphotransferases" evidence=IEA;ISS
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
UNIPROTKB|Q69TT2 OSJNBa0026P23.2-1 "Os06g0476200 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XHZ2 P0475E07.126 "Putative phosphoglucomutase, chloroplast" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J352 CHLREDRAFT_119219 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|Q9RSQ3 glmM "Phosphoglucosamine mutase" [Deinococcus radiodurans R1 (taxid:243230)] Back     alignment and assigned GO terms
UNIPROTKB|Q4K3S1 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q88BD4 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|O34824 glmM "Phosphoglucosamine mutase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] Back     alignment and assigned GO terms
UNIPROTKB|A6VEC9 algC "Phosphomannomutase AlgC" [Pseudomonas aeruginosa PA7 (taxid:381754)] Back     alignment and assigned GO terms
TIGR_CMR|BA_0157 BA_0157 "phosphoglucosamine mutase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
PLN02371 583 PLN02371, PLN02371, phosphoglucosamine mutase fami 1e-121
cd03089 443 cd03089, PMM_PGM, The phosphomannomutase/phosphogl 5e-42
pfam02878138 pfam02878, PGM_PMM_I, Phosphoglucomutase/phosphoma 4e-29
TIGR03990 443 TIGR03990, Arch_GlmM, phosphoglucosamine mutase 1e-22
COG1109 464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 1e-22
cd05802 434 cd05802, GlmM, GlmM is a bacterial phosphoglucosam 6e-17
TIGR01455 443 TIGR01455, glmM, phosphoglucosamine mutase 5e-16
cd03087 439 cd03087, PGM_like1, This archaeal PGM-like (phosph 3e-15
PRK14318 448 PRK14318, glmM, phosphoglucosamine mutase; Provisi 5e-15
cd05803 445 cd05803, PGM_like4, This PGM-like (phosphoglucomut 1e-14
PRK14316 448 PRK14316, glmM, phosphoglucosamine mutase; Provisi 1e-13
PRK14323 440 PRK14323, glmM, phosphoglucosamine mutase; Provisi 1e-12
cd03088 459 cd03088, ManB, ManB is a bacterial phosphomannomut 5e-12
PRK14317 465 PRK14317, glmM, phosphoglucosamine mutase; Provisi 3e-10
PRK10887 443 PRK10887, glmM, phosphoglucosamine mutase; Provisi 4e-10
PRK14324 446 PRK14324, glmM, phosphoglucosamine mutase; Provisi 7e-10
PRK14314 450 PRK14314, glmM, phosphoglucosamine mutase; Provisi 1e-09
PRK14321 449 PRK14321, glmM, phosphoglucosamine mutase; Provisi 3e-09
PRK14319 430 PRK14319, glmM, phosphoglucosamine mutase; Provisi 2e-08
PRK14320 443 PRK14320, glmM, phosphoglucosamine mutase; Provisi 2e-08
PRK14315 448 PRK14315, glmM, phosphoglucosamine mutase; Provisi 2e-08
PRK14322 429 PRK14322, glmM, phosphoglucosamine mutase; Provisi 5e-08
PRK09542 445 PRK09542, manB, phosphomannomutase/phosphoglucomut 3e-07
PRK15414 456 PRK15414, PRK15414, phosphomannomutase CpsG; Provi 7e-07
cd05800 461 cd05800, PGM_like2, This PGM-like (phosphoglucomut 1e-06
PLN02895 562 PLN02895, PLN02895, phosphoacetylglucosamine mutas 6e-05
cd03086 513 cd03086, PGM3, PGM3 (phosphoglucomutase 3), also k 8e-05
PTZ00302 585 PTZ00302, PTZ00302, N-acetylglucosamine-phosphate 8e-04
cd03084 355 cd03084, phosphohexomutase, The alpha-D-phosphohex 0.003
>gnl|CDD|215211 PLN02371, PLN02371, phosphoglucosamine mutase family protein Back     alignment and domain information 
 Score =  358 bits (921), Expect = e-121
 Identities = 136/277 (49%), Positives = 171/277 (61%), Gaps = 18/277 (6%)

Query: 3   STTTPSISLQSNSSRTSFLSSPGPKCPKPFQITGLKLPFLSHSIKFT---HVKSSVTDKY 59
           S+  P++      + +  LS+         Q      P  S S+K T      ++     
Sbjct: 1   SSLAPTVPSDLLPATSGKLSTS------LSQSVTAPAPS-SPSLKLTRARTGTAAAASSS 53

Query: 60  NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENER 119
            E  V +  D IR+LQNGSD+RGVA+EG +G  V LTP AVEAI  +F EW+   LE ++
Sbjct: 54  TESPVVD-KDDIRKLQNGSDIRGVAVEGVEGEPVTLTPPAVEAIGAAFAEWL---LEKKK 109

Query: 120 GRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYD 179
                +++VS+G+DPR+SGP L+ AVFAGLA AG  V DMGLATTPA FMSTL     YD
Sbjct: 110 ADGSGELRVSVGRDPRISGPRLADAVFAGLASAGLDVVDMGLATTPAMFMSTLTEREDYD 169

Query: 180 ASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKF----ANRLTKVSTVLRNP 235
           A IM+TASHLPY RNGLKFFTK GGL  P ++DI   AAR +       L K S+   + 
Sbjct: 170 APIMITASHLPYNRNGLKFFTKDGGLGKPDIKDILERAARIYKEWSDEGLLKSSSGASSV 229

Query: 236 PTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQV 272
             RVDFMSTYAKHLRD IKE V HP +YETPL+GF++
Sbjct: 230 VCRVDFMSTYAKHLRDAIKEGVGHPTNYETPLEGFKI 266

Length = 583
>gnl|CDD|100091 cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>gnl|CDD|217263 pfam02878, PGM_PMM_I, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Back     alignment and domain information
>gnl|CDD|234431 TIGR03990, Arch_GlmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|100095 cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|100089 cd03087, PGM_like1, This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|237672 PRK14318, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100096 cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>gnl|CDD|237670 PRK14316, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100090 cd03088, ManB, ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>gnl|CDD|237671 PRK14317, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|236787 PRK10887, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|237669 PRK14315, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|236557 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional Back     alignment and domain information
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>gnl|CDD|215485 PLN02895, PLN02895, phosphoacetylglucosamine mutase Back     alignment and domain information
>gnl|CDD|100088 cd03086, PGM3, PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>gnl|CDD|240352 PTZ00302, PTZ00302, N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
PLN02371 583 phosphoglucosamine mutase family protein 100.0
PRK14317 465 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14324 446 glmM phosphoglucosamine mutase; Provisional 100.0
cd05802 434 GlmM GlmM is a bacterial phosphoglucosamine mutase 100.0
PRK14318 448 glmM phosphoglucosamine mutase; Provisional 100.0
cd03089 443 PMM_PGM The phosphomannomutase/phosphoglucomutase 100.0
PRK14315 448 glmM phosphoglucosamine mutase; Provisional 100.0
cd05805 441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 100.0
PRK14323 440 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14316 448 glmM phosphoglucosamine mutase; Provisional 100.0
cd05803 445 PGM_like4 This PGM-like (phosphoglucomutase-like) 100.0
PRK14314 450 glmM phosphoglucosamine mutase; Provisional 100.0
COG1109 464 {ManB} Phosphomannomutase [Carbohydrate transport 100.0
PRK10887 443 glmM phosphoglucosamine mutase; Provisional 100.0
PRK15414 456 phosphomannomutase CpsG; Provisional 100.0
cd05800 461 PGM_like2 This PGM-like (phosphoglucomutase-like) 100.0
TIGR01455 443 glmM phosphoglucosamine mutase. This model describ 100.0
PRK14322 429 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14321 449 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14320 443 glmM phosphoglucosamine mutase; Provisional 100.0
cd03087 439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 100.0
PTZ00150 584 phosphoglucomutase-2-like protein; Provisional 100.0
PRK09542 445 manB phosphomannomutase/phosphoglucomutase; Review 100.0
PRK14319 430 glmM phosphoglucosamine mutase; Provisional 100.0
cd03088 459 ManB ManB is a bacterial phosphomannomutase (PMM) 100.0
TIGR01132 543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 100.0
cd05799 487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 100.0
PF02878137 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, 100.0
PRK07564 543 phosphoglucomutase; Validated 100.0
PLN02307 579 phosphoglucomutase 100.0
cd03085 548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
cd05801 522 PGM_like3 This bacterial PGM-like (phosphoglucomut 100.0
KOG1220 607 consensus Phosphoglucomutase/phosphomannomutase [C 99.97
COG0033 524 Pgm Phosphoglucomutase [Carbohydrate transport and 99.89
cd03084 355 phosphohexomutase The alpha-D-phosphohexomutase su 99.83
KOG0625 558 consensus Phosphoglucomutase [Carbohydrate transpo 99.76
cd03086 513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 99.38
PLN02895 562 phosphoacetylglucosamine mutase 99.11
PTZ00302 585 N-acetylglucosamine-phosphate mutase; Provisional 99.05
PLN02895 562 phosphoacetylglucosamine mutase 98.76
PTZ00302 585 N-acetylglucosamine-phosphate mutase; Provisional 98.48
cd03086 513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 98.47
KOG2537 539 consensus Phosphoglucomutase/phosphomannomutase [C 97.33
KOG2537 539 consensus Phosphoglucomutase/phosphomannomutase [C 97.05
PF02502140 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: 87.1
TIGR01119171 lacB galactose-6-phosphate isomerase, LacB subunit 86.88
TIGR01118141 lacA galactose-6-phosphate isomerase, LacA subunit 86.39
PRK08621142 galactose-6-phosphate isomerase subunit LacA; Revi 86.13
PRK05571148 ribose-5-phosphate isomerase B; Provisional 86.09
PRK12613141 galactose-6-phosphate isomerase subunit LacA; Prov 85.78
TIGR01120143 rpiB ribose 5-phosphate isomerase B. Involved in t 85.45
PTZ00215151 ribose 5-phosphate isomerase; Provisional 85.22
TIGR02133148 RPI_actino ribose 5-phosphate isomerase. This fami 82.26
PRK08622171 galactose-6-phosphate isomerase subunit LacB; Revi 82.25
TIGR00689144 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/La 81.26
PRK12615171 galactose-6-phosphate isomerase subunit LacB; Revi 80.68
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information 
Probab=100.00  E-value=1.9e-41  Score=341.30  Aligned_cols=208  Identities=58%  Similarity=0.876  Sum_probs=165.5

Q ss_pred             hhccccccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHH
Q 023423           69 DRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAG  148 (282)
Q Consensus        69 ~~~~~Lf~gtdIRGi~~~g~~g~~~dLTpe~v~~ig~A~g~~l~~~~~~~~g~~~~~~~VvVG~D~R~sS~~la~ala~g  148 (282)
                      +++++||+++||||+++.|..|+.++|||+++.++|+|||+||.++.... +  ....+|+||||+|.+|++|++++++|
T Consensus        62 ~~~~~lf~~~giRGv~~~g~~g~~v~lTpe~v~~ig~A~a~~l~~~~~~~-~--~~~~~VvVG~D~R~sS~~l~~a~a~g  138 (583)
T PLN02371         62 DDIRKLQNGSDIRGVAVEGVEGEPVTLTPPAVEAIGAAFAEWLLEKKKAD-G--SGELRVSVGRDPRISGPRLADAVFAG  138 (583)
T ss_pred             HHHHHhhhhcCcceEEecCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc-c--CCCCeEEEEeCCCCChHHHHHHHHHH
Confidence            58999999999999999888878789999999999999999997641000 0  01247999999999999999999999


Q ss_pred             HHHCCCcEEEeccCChHHHHHHhhcCCCCCCeEEEEeccCCCCCCceEEEeeCCCCCChHHHHHHHHHHHh--hhhccc-
Q 023423          149 LARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAAR--KFANRL-  225 (282)
Q Consensus       149 L~s~Gv~V~dlG~~pTP~l~fav~~~~~~a~gGImITASHNP~~~NGiK~~~~~G~l~~~~i~~i~~~~~~--~~~~~~-  225 (282)
                      |+++|++|+++|++|||+++|+++..+++++|||||||||||++||||||++++|....++++++++....  ..+.+. 
T Consensus       139 L~s~Gi~V~~~g~~pTP~~~~av~~~~~~~~gGImITASHNP~~~NGiK~~~~~G~~~~~~~~~~ie~~~~~~~e~~~~~  218 (583)
T PLN02371        139 LASAGLDVVDMGLATTPAMFMSTLTEREDYDAPIMITASHLPYNRNGLKFFTKDGGLGKPDIKDILERAARIYKEWSDEG  218 (583)
T ss_pred             HHHCCCEEEEecccCchHHHHHHHhccCCCceEEEEeCCCCCCCCCCEEEeCCCCCCCchHHHHHHHHHHhhcccccccc
Confidence            99999999999999999999999732337899999999999999999999999999666666666665433  111110 


Q ss_pred             --cc-cccccCCCCcccchHHHHHHHHHHHhchhcCCCCCCCCCCCCCeEEEeCCCCCC
Q 023423          226 --TK-VSTVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVS  281 (282)
Q Consensus       226 --~~-~~~~g~~~~~~~d~~~~Yi~~L~~~i~~~~~~~~~~~~~l~~lkVvvD~~~~~~  281 (282)
                        +. ....|.+  ...|+++.|+++|++.++...+||.+...++++|||||||+||++
T Consensus       219 ~~~~~~~~~g~i--~~~d~~~~Y~~~l~~~i~~~~~~~~~~~~~~~~lkIvvD~~nGag  275 (583)
T PLN02371        219 LLKSSSGASSVV--CRVDFMSTYAKHLRDAIKEGVGHPTNYETPLEGFKIVVDAGNGAG  275 (583)
T ss_pred             cchhhhccCCcE--EEechHHHHHHHHHHHHHHhhccccccccCCCCCEEEEeCCCCch
Confidence              00 0113432  346889999999999998766666543445679999999999986

>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>PLN02307 phosphoglucomutase Back     alignment and domain information
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB) Back     alignment and domain information
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit Back     alignment and domain information
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit Back     alignment and domain information
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed Back     alignment and domain information
>PRK05571 ribose-5-phosphate isomerase B; Provisional Back     alignment and domain information
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional Back     alignment and domain information
>TIGR01120 rpiB ribose 5-phosphate isomerase B Back     alignment and domain information
>PTZ00215 ribose 5-phosphate isomerase; Provisional Back     alignment and domain information
>TIGR02133 RPI_actino ribose 5-phosphate isomerase Back     alignment and domain information
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed Back     alignment and domain information
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family Back     alignment and domain information
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1wqa_A 455 Crystal Structure Of Pyrococcus Horikoshii Phosphom 2e-10
3pdk_A 469 Crystal Structure Of Phosphoglucosamine Mutase From 7e-10
1k2y_X 463 Crystal Structure Of Phosphomannomutase/phosphogluc 4e-09
2fkm_X 462 Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisph 4e-09
2fkf_A 462 PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMON 5e-09
2h4l_X 463 Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 5e-09
1p5d_X 463 Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Lengt 5e-09
3rsm_A 463 Crystal Structure Of S108c Mutant Of PmmPGM Length 5e-09
3bkq_X 463 Structure Of The P368g Mutant Of PmmPGM IN COMPLEX 6e-09
1k35_A 463 Crystal Structure Of Phosphomannomutase/phosphogluc 6e-08
2f7l_A 455 Crystal Structure Of Sulfolobus Tokodaii Phosphoman 6e-08
3i3w_A 443 Structure Of A Phosphoglucosamine Mutase From Franc 4e-07
4hjh_A 481 Iodide Sad Phased Crystal Structure Of A Phosphoglu 3e-05
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+ Length = 455 Back     alignment and structure 
Iteration: 1

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 80  VRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139
           VRG+A E        +TP     I  +FG  + R     R +P+    V +G+D RVSG 
Sbjct: 10  VRGIANE-------KITPEFAMKIGMAFGTLLKRE---GRKKPL----VVVGRDTRVSGE 55
Query: 140 SLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFF 199
            L  A+ +GL   GC V D+G+A TPA   +T    F  D   ++TASH P   NG+K  
Sbjct: 56  MLKEALISGLLSVGCDVIDVGIAPTPAVQWAT--KHFNADGGAVITASHNPPEYNGIKLL 113
Query: 200 TKKG 203
              G
Sbjct: 114 EPNG 117
>pdb|3PDK|A Chain A, Crystal Structure Of Phosphoglucosamine Mutase From B. Anthracis Length = 469 Back     alignment and structure
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase S108a Mutant From P. Aeruginosa Length = 463 Back     alignment and structure
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 463 Back     alignment and structure
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Length = 463 Back     alignment and structure
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM Length = 463 Back     alignment and structure
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH ITS SUBSTRATE Length = 463 Back     alignment and structure
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase From P.aeruginosa Length = 463 Back     alignment and structure
>pdb|2F7L|A Chain A, Crystal Structure Of Sulfolobus Tokodaii PhosphomannomutasePHOSPHOGLUCOMUTASE Length = 455 Back     alignment and structure
>pdb|3I3W|A Chain A, Structure Of A Phosphoglucosamine Mutase From Francisella Tularensis Length = 443 Back     alignment and structure
>pdb|4HJH|A Chain A, Iodide Sad Phased Crystal Structure Of A Phosphoglucomutase From Brucella Melitensis Complexed With Glucose-6-Phosphate Length = 481 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1wqa_A 455 Phospho-sugar mutase; alpha-beta protein, unphosph 4e-21
3uw2_A 485 Phosphoglucomutase/phosphomannomutase family PROT; 7e-21
1tuo_A 464 Putative phosphomannomutase; thermus thermophilus 1e-20
1p5d_X 463 PMM, phosphomannomutase; alpha/beta protein, phosp 4e-20
2f7l_A 455 455AA long hypothetical phospho-sugar mutase; phos 5e-19
3pdk_A 469 Phosphoglucosamine mutase; 4-domain architecture, 2e-16
3i3w_A 443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 5e-15
2z0f_A 524 Putative phosphoglucomutase; isomerase, magnesium, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3na5_A 570 Phosphoglucomutase; isomerase, metal binding; HET: 9e-06
2dka_A 544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 2e-05
3pmg_A 561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 3e-05
1kfi_A 572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 7e-04
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Length = 455 Back     alignment and structure
 Score = 91.1 bits (227), Expect = 4e-21
 Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 17/128 (13%)

Query: 77  GSD-VRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPR 135
           G+  VRG+A   E      +TP     I  +FG  + R     R +P     V +G+D R
Sbjct: 6   GTFGVRGIA--NE-----KITPEFAMKIGMAFGTLLKR---EGRKKP----LVVVGRDTR 51

Query: 136 VSGPSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNG 195
           VSG  L  A+ +GL   GC V D+G+A TPA   +T    F  D   ++TASH P   NG
Sbjct: 52  VSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWAT--KHFNADGGAVITASHNPPEYNG 109

Query: 196 LKFFTKKG 203
           +K     G
Sbjct: 110 IKLLEPNG 117
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Length = 485 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Length = 463 Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Length = 455 Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Length = 469 Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Length = 443 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Length = 544 Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
3pdk_A 469 Phosphoglucosamine mutase; 4-domain architecture, 100.0
3i3w_A 443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 100.0
2f7l_A 455 455AA long hypothetical phospho-sugar mutase; phos 100.0
1wqa_A 455 Phospho-sugar mutase; alpha-beta protein, unphosph 100.0
1p5d_X 463 PMM, phosphomannomutase; alpha/beta protein, phosp 100.0
3uw2_A 485 Phosphoglucomutase/phosphomannomutase family PROT; 100.0
1tuo_A 464 Putative phosphomannomutase; thermus thermophilus 100.0
4hjh_A 481 Phosphomannomutase; structural genomics, niaid, na 100.0
2z0f_A 524 Putative phosphoglucomutase; isomerase, magnesium, 100.0
3na5_A 570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
1kfi_A 572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
3pmg_A 561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
2dka_A 544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 99.7
2dka_A 544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 97.8
1o1x_A155 Ribose-5-phosphate isomerase RPIB; structural geno 91.36
2vvr_A149 Ribose-5-phosphate isomerase B; RPIB, carbohydrate 89.99
2vvp_A162 Ribose-5-phosphate isomerase B; RPIB, RV2465C, RAR 87.8
3he8_A149 Ribose-5-phosphate isomerase; CTRPI B, isomerizati 87.15
3ph3_A169 Ribose-5-phosphate isomerase; alpha-beta-alpha san 86.0
3s5p_A166 Ribose 5-phosphate isomerase; structural genomics, 85.69
2ppw_A216 Conserved domain protein; the putative RPIB, PSI-2 81.64
4em8_A148 Ribose 5-phosphate isomerase B; ssgcid, seattle st 81.49
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
Probab=100.00  E-value=7.2e-40  Score=320.85  Aligned_cols=182  Identities=26%  Similarity=0.356  Sum_probs=152.1

Q ss_pred             cccccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHH
Q 023423           72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR  151 (282)
Q Consensus        72 ~~Lf~gtdIRGi~~~g~~g~~~dLTpe~v~~ig~A~g~~l~~~~~~~~g~~~~~~~VvVG~D~R~sS~~la~ala~gL~s  151 (282)
                      +++|+.+||||++++       +||++++.++|+|||+++.+..        ...+|+||||+|.+|++|++++++||++
T Consensus        23 ~~~FGt~GiRG~~~~-------~lt~~~v~~~g~a~~~~l~~~~--------~~~~VvIG~D~R~ss~~~~~a~a~gl~s   87 (469)
T 3pdk_A           23 GKYFGTDGVRGVANK-------ELTPELAFKIGRFGGYVLTKDT--------DRPKVIIGRDTRISGHMLEGALVAGLLS   87 (469)
T ss_dssp             CCSCBTTBEEEEBTT-------TBCHHHHHHHHHHHHHHHHTTC--------SSCEEEEEECSCTTHHHHHHHHHHHHHT
T ss_pred             ccccCCCCeeeecCC-------CCCHHHHHHHHHHHHHHHHhhC--------CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478888889999974       8999999999999999997631        1368999999999999999999999999


Q ss_pred             CCCcEEEeccCChHHHHHHhhcCCCCCCeEEEEeccCCCCCCceEEEeeCCCC-CChHHHHHHHHHHHhh--hhcccccc
Q 023423          152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGG-LTSPVVEDICGEAARK--FANRLTKV  228 (282)
Q Consensus       152 ~Gv~V~dlG~~pTP~l~fav~~~~~~a~gGImITASHNP~~~NGiK~~~~~G~-l~~~~i~~i~~~~~~~--~~~~~~~~  228 (282)
                      +|++|+++|++|||+++|+++  ++++++||||||||||++||||||++++|. +.++..++|++.+.+.  .+++... 
T Consensus        88 ~Gi~V~~~g~~pTP~l~fav~--~~~a~~GImITASHNP~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~-  164 (469)
T 3pdk_A           88 TGAEVMRLGVISTPGVAYLTK--ALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIEALLDKEVDELPRPTG-  164 (469)
T ss_dssp             TTCEEEEEEECCHHHHHHHHH--HHTCSEEEEECCTTSCTTEEEEEEEETTSSBCCHHHHHHHHHHHHSSSCCSCCCCG-
T ss_pred             CCCEEEEeCCCChHHHHHHHH--hcCCCeEEEEEeCCCcchhCcEEEecCCCcCCCHHHHHHHHHHHhccccccCcccc-
Confidence            999999999999999999998  789999999999999999999999999998 6666677777766542  2222211 


Q ss_pred             ccccCCCCcccchHHHHHHHHHHHhchhcCCCCCCCCCCCCCeEEEeCCCCCCC
Q 023423          229 STVLRNPPTRVDFMSTYAKHLRDVIKERVNHPLHYETPLKGFQVPFFTSLFVSY  282 (282)
Q Consensus       229 ~~~g~~~~~~~d~~~~Yi~~L~~~i~~~~~~~~~~~~~l~~lkVvvD~~~~~~~  282 (282)
                      ...|.+ ....|+.+.|+++|++.++.          .++++||||||+||+++
T Consensus       165 ~~~g~~-~~~~d~~~~Y~~~l~~~~~~----------~~~~lkivvD~~nG~~~  207 (469)
T 3pdk_A          165 TNLGQV-SDYFEGGQKYLQYIKQTVEE----------DFSGLHIALDCAHGATS  207 (469)
T ss_dssp             GGSCCE-EECTHHHHHHHHHHHTTCSS----------CCTTCEEEEECTTSTTT
T ss_pred             ccCccE-EEcccHHHHHHHHHHHhcCc----------ccCCCEEEEECCCchHH
Confidence            124542 12468899999999998862          35789999999999975
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1 Back     alignment and structure
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A Back     alignment and structure
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A Back     alignment and structure
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A* Back     alignment and structure
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A* Back     alignment and structure
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia} Back     alignment and structure
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae} Back     alignment and structure
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1p5dx1146 c.84.1.1 (X:9-154) Phosphomannomutase/phosphogluco 8e-13
d3pmga1190 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Ory 3e-11
d1kfia1203 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphopro 2e-10
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Length = 146 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 62.5 bits (151), Expect = 8e-13
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 19/154 (12%)

Query: 79  DVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSG 138
           D+RGV  +        LT      I  + G   +            +  V++G+D R+SG
Sbjct: 10  DIRGVVGD-------TLTAETAYWIGRAIGSESL---------ARGEPCVAVGRDGRLSG 53

Query: 139 PSLSVAVFAGLARAGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKF 198
           P L   +  GL   GC V D+G+  TP  + +  +      + +M+T SH P   NG K 
Sbjct: 54  PELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANV--LEGKSGVMLTGSHNPPDYNGFKI 111

Query: 199 FTKKGGLTSPVVEDICGEAAR-KFANRLTKVSTV 231
                 L +  ++ +     +   A+ +  V  V
Sbjct: 112 VVAGETLANEQIQALRERIEKNDLASGVGSVEQV 145
>d3pmga1 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 190 Back     information, alignment and structure
>d1kfia1 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 203 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1p5dx1146 Phosphomannomutase/phosphoglucomutase {Pseudomonas 100.0
d3pmga1190 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.97
d1kfia1203 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.95
d3pmga2113 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 95.89
d1nn4a_159 Alternate ribose 5-phosphate isomerase B, RpiB {Es 89.16
d2vvpa1156 Alternate ribose 5-phosphate isomerase B, RpiB {My 84.73
d1o1xa_145 Putative sugar-phosphate isomerase {Thermotoga mar 80.16
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.6e-39  Score=268.96  Aligned_cols=132  Identities=27%  Similarity=0.433  Sum_probs=122.0

Q ss_pred             cccccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHH
Q 023423           72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR  151 (282)
Q Consensus        72 ~~Lf~gtdIRGi~~~g~~g~~~dLTpe~v~~ig~A~g~~l~~~~~~~~g~~~~~~~VvVG~D~R~sS~~la~ala~gL~s  151 (282)
                      +++|+.|||||+++       ++||++++.++|+|||+++.+.     +    ..+|+||||+|.+|++|+++++++|++
T Consensus         3 ~sif~~~dIRGi~~-------~~lt~~~~~~ig~a~~~~~~~~-----~----~~~VvIg~D~R~ss~~~~~~~~~gl~~   66 (146)
T d1p5dx1           3 ASIFRAYDIRGVVG-------DTLTAETAYWIGRAIGSESLAR-----G----EPCVAVGRDGRLSGPELVKQLIQGLVD   66 (146)
T ss_dssp             GGGBCSSSEEEEBT-------TTBCHHHHHHHHHHHHHHHHHT-----T----CCEEEEEECSCTTHHHHHHHHHHHHHT
T ss_pred             hhhccccCEeeeCC-------CCcCHHHHHHHHHHHHHHHHhc-----C----CCEEEEEECCccchhhhhhhhheeecc
Confidence            67999999999997       4899999999999999999875     2    368999999999999999999999999


Q ss_pred             CCCcEEEeccCChHHHHHHhhcCCCCCCeEEEEeccCCCCCCceEEEeeCCCCCChHHHHHHHHHHHhhh
Q 023423          152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMMTASHLPYTRNGLKFFTKKGGLTSPVVEDICGEAARKF  221 (282)
Q Consensus       152 ~Gv~V~dlG~~pTP~l~fav~~~~~~a~gGImITASHNP~~~NGiK~~~~~G~l~~~~i~~i~~~~~~~~  221 (282)
                      +|++|+++|++|||+++|+++  ++++++||||||||||++||||||+.++|.+.+++++++++.+....
T Consensus        67 ~G~~V~~~g~~pTP~l~~~~~--~~~~~~GI~ITASHNP~~~NGiK~~~~g~~~~~~~~~~i~~~~~~~~  134 (146)
T d1p5dx1          67 CGCQVSDVGMVPTPVLYYAAN--VLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKND  134 (146)
T ss_dssp             BTCEEEEEEECCHHHHHHHHH--HSSCSEEEEECCTTSCTTEEEEEEEETTEECCTHHHHHHHHHHHHTC
T ss_pred             CceEEEeccccccHHHHHHHH--hhccCceeEEeecCCccccceEEEecCCCccChHHHHHHHHHHhcCC
Confidence            999999999999999999998  78999999999999999999999999866799999999998876643
>d3pmga1 c.84.1.1 (A:1-190) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia1 c.84.1.1 (A:3-205) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1nn4a_ c.121.1.1 (A:) Alternate ribose 5-phosphate isomerase B, RpiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure