Citrus Sinensis ID: 023478

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHHHHHHHccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcccccHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccccccccHHcccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccc
Coil and Loop (DISEMBL)
mslssgsdegplHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLsrciyngrleiwpskdwelesiHEFEVLEMIREHISTVIGLrancsvtdswaTTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHlthrnslqfpeawsyglkqnqvvgcvnntqsislgrgtnghelkqenlkcyvmgfdpeTLQRCAKLRSREAVNLVEkhscalfgdgqtglldtdeVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Flexible Loop (DISEMBL)
mslssgsdegpLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGrleiwpskdweLESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Low Complexity Region (SEG)
MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered region (IsUnstruct)
******************LKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYK****
Disordered Region (DISOPRED)
**********PLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSR******************SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEEC********************************************************LKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLK**
Disordered Region (DISEMBL)
***********LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered Region (DISPRO)
*******DEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH**********************************************LKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLK*N
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
255580495	408	conserved hypothetical protein [Ricinus	0.996	0.686	0.725	1e-115
224069880	275	predicted protein [Populus trichocarpa]	0.950	0.970	0.754	1e-113
225467702	380	PREDICTED: uncharacterized protein LOC10	0.939	0.694	0.667	1e-101
356558985	388	PREDICTED: uncharacterized protein LOC10	0.975	0.706	0.654	6e-99
449464112	388	PREDICTED: uncharacterized protein LOC10	0.978	0.708	0.638	4e-97
356504408	393	PREDICTED: uncharacterized protein LOC10	0.975	0.697	0.640	1e-95
357513325	372	hypothetical protein MTR_8g012420 [Medic	0.989	0.747	0.619	1e-94
297833518	371	hypothetical protein ARALYDRAFT_896892 [	0.893	0.676	0.612	2e-89
356566244	353	PREDICTED: uncharacterized protein LOC10	0.921	0.733	0.587	4e-88
18397912	368	uncharacterized protein [Arabidopsis tha	0.893	0.682	0.608	9e-87

>gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/281 (72%), Positives = 237/281 (84%), Gaps = 1/281 (0%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M LSS SDE  LHRRIAQLKEHECQ AVEDVMYMLI  KFSEIRV LVPKLSRCIYNGRL
Sbjct: 129 MFLSSRSDEASLHRRIAQLKEHECQIAVEDVMYMLIFSKFSEIRVPLVPKLSRCIYNGRL 188

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI PSKDWELESIH FEVLEMI+EH+ TVIGLRAN SVTDSWATTEIQRL+LGRVY AS+
Sbjct: 189 EIGPSKDWELESIHSFEVLEMIKEHVCTVIGLRANSSVTDSWATTEIQRLQLGRVYAASV 248

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKSASLR+YLE+C+A +H ++HL+ R   Q+PE+ S+GL  N V   ++N QS S
Sbjct: 249 LYGYFLKSASLRHYLEQCIAVSHHNVHLSCRTVRQYPESISHGLT-NIVFRRISNMQSGS 307

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
            G+G+   + ++  L+CYVMGFD ETLQRCAKL+S+EA+NL+EKHS ALFG+  TG L+ 
Sbjct: 308 AGQGSIKQDWQRGKLRCYVMGFDAETLQRCAKLKSKEAMNLIEKHSSALFGNDNTGSLEN 367

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           DEVILTSFSSLKRLVLEA+AFGSFLWD EEY ++++KL EN
Sbjct: 368 DEVILTSFSSLKRLVLEAVAFGSFLWDTEEYVNSIFKLSEN 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/269 (75%), Positives = 231/269 (85%), Gaps = 2/269 (0%)

Query: 14  RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 73
           +RIA+LKEHECQ AVEDVMYML+LYKFSEIRV LVPKLSRCIYNGRLEI PSKDWELESI
Sbjct: 8   QRIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELESI 67

Query: 74  HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 133
           H FEVLEM+REH+STVIGL+AN SV DSWATTE+QR RLGRVY ASILYGYFLKSASLR+
Sbjct: 68  HSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASLRH 127

Query: 134 YLEECLASAHQDLHLTHRNSLQFPEAW-SYGLKQNQVVGCVNNTQSISLGRGTNGHELKQ 192
           +LE CL   HQD+HL HR++LQFPE+  SYGL  N V G ++N QS S G   N  + + 
Sbjct: 128 HLEWCLVLPHQDIHLGHRSTLQFPESLPSYGL-TNLVFGHISNKQSTSQGTRLNRPKSEH 186

Query: 193 ENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLK 252
           E LKCY+MGFD ETLQRCAKL+S+EAVNL+EKHSCALFGD +TG+L+ DEVILTSFSSLK
Sbjct: 187 EKLKCYMMGFDSETLQRCAKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSSLK 246

Query: 253 RLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           RLVLEA+AFG FLWD EE  ++VYKLK+N
Sbjct: 247 RLVLEAVAFGCFLWDTEEDVNSVYKLKDN 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/271 (66%), Positives = 222/271 (81%), Gaps = 7/271 (2%)

Query: 12  LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELE 71
           LHRRIA+LKE ECQ AVEDVMY+LI YKFSEIRV LVP+LSRCIYNGRLEIWP++DW LE
Sbjct: 116 LHRRIAELKERECQIAVEDVMYLLIFYKFSEIRVHLVPRLSRCIYNGRLEIWPARDWALE 175

Query: 72  SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASL 131
            IH FEVLEMI+EH++TV+G +   +VT++WATT+I+R +LG++Y ASILYGYFLKSASL
Sbjct: 176 CIHNFEVLEMIKEHLTTVLGWKPKSNVTENWATTQIRRFQLGQIYAASILYGYFLKSASL 235

Query: 132 RYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELK 191
           R++LE  L  +H DL  ++ +       WSYGLK +  +G   ++Q  SLG  ++  E K
Sbjct: 236 RHHLEMSLVHSHHDLPSSNVSGF-----WSYGLK-DLFLGPNCSSQPTSLGEASSRQEEK 289

Query: 192 QE-NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSS 250
           +E  L+CYVMGFDP+TLQRCAKL+S+EAVNLVEKHSCALFGD +TGLL+TD+VI TSFSS
Sbjct: 290 EEKKLRCYVMGFDPDTLQRCAKLKSKEAVNLVEKHSCALFGDEKTGLLETDDVISTSFSS 349

Query: 251 LKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           +KRLVLEA+AFGSFLWD EEY  +VY LKEN
Sbjct: 350 MKRLVLEAVAFGSFLWDTEEYVGSVYNLKEN 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max]

 Score =  366 bits (939), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 184/281 (65%), Positives = 223/281 (79%), Gaps = 7/281 (2%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M L S SDE  LHRRIAQ+KE++CQ AVEDVMY+LI YKFSEIRV +VPKLS C+YNGRL
Sbjct: 115 MVLGSASDEALLHRRIAQVKENQCQIAVEDVMYLLIFYKFSEIRVPMVPKLSSCLYNGRL 174

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI PSKDWELESIH  EVL+MIREHI+TV GLRA  SVT+ WATT++++  L RVYVASI
Sbjct: 175 EILPSKDWELESIHSSEVLDMIREHITTVTGLRAKSSVTECWATTQVRQFLLARVYVASI 234

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKS SLRY+LE  L+ A+ DLHL HR S+ F    SYG K + + G ++N    S
Sbjct: 235 LYGYFLKSVSLRYHLERNLSLANHDLHLGHRTSVMF----SYGFK-DAIFGHLSNMP--S 287

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
           LG+G    E + E+LKCYVM F P +LQRCA+LRS+EAVNLV  +SCALF + ++G ++ 
Sbjct: 288 LGQGLIRPEEEIEDLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNKESGSVEN 347

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 348 DDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKDD 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]

 Score =  360 bits (924), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 184/288 (63%), Positives = 222/288 (77%), Gaps = 13/288 (4%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M +S+ SDE  LHRRIAQLKEHECQ AV+DVMYMLI Y+FSEIRV LVPKLSRC+YNGRL
Sbjct: 107 MLISAHSDEALLHRRIAQLKEHECQIAVQDVMYMLIFYRFSEIRVNLVPKLSRCVYNGRL 166

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI P KDWELESI+E EVL MI+EHI+TVIGLRA+ SVTD+WA T I++  LGRVYVASI
Sbjct: 167 EILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLGRVYVASI 226

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNS------LQFPEAWSYGLKQNQVVGCVN 174
           LYGYFLKSA LR++LE+ LA  +     THRN       LQFPE   YG + N + G ++
Sbjct: 227 LYGYFLKSAILRHHLEQKLAIPN-----THRNGGHPKTFLQFPEMCLYGFR-NLLSGRLS 280

Query: 175 NTQSISLGRG-TNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDG 233
           N  S+   +  ++  E + E LK ++ GFD E LQRCAKL+S+EA+NL+E HS AL G+ 
Sbjct: 281 NMLSVPHNQVLSSSQETEPEKLKRFLTGFDSEALQRCAKLKSKEALNLIENHSYALLGNE 340

Query: 234 QTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           + G  + +EVI+TSFSSLKRLVLEA+AFGSFLWDAEEY D +YKLKEN
Sbjct: 341 EVGFFENNEVIVTSFSSLKRLVLEAVAFGSFLWDAEEYVDTIYKLKEN 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max]

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 180/281 (64%), Positives = 219/281 (77%), Gaps = 7/281 (2%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M L S SDE  LHRRIA +KE++CQ AVEDV+Y+LI YKFSEIRV +VPKLS C+YNGRL
Sbjct: 120 MVLGSASDEALLHRRIALVKENQCQIAVEDVIYLLIFYKFSEIRVPMVPKLSSCLYNGRL 179

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI PSKDWELESIH  EVL+MIREHI+TV GLRA  SVT+ WATT +++  L RVYVASI
Sbjct: 180 EILPSKDWELESIHSLEVLDMIREHITTVTGLRAKSSVTECWATTHVRQFLLARVYVASI 239

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKS SLRY+LE  L+ A+ DLHL H+ SL      SYG K + + G ++N    S
Sbjct: 240 LYGYFLKSVSLRYHLERNLSLANHDLHLGHKTSLM----CSYGFK-DAIFGHLSNMS--S 292

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
           LG+G    E + E+LKCYVM F P +LQRCA+LRS+EAVNLV  +SCALF + ++G ++ 
Sbjct: 293 LGQGLIRPEEELEDLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNEESGSVEN 352

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VY LK++
Sbjct: 353 DDVILTSFSSLKRLVLEAVAFGSFLWEIEDYIDNVYNLKDD 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 174/281 (61%), Positives = 219/281 (77%), Gaps = 3/281 (1%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M L+S SDE  LHRRIA++KE++C+ AVED+M +LI +KFSEIR  LVPKLSRC+YNGRL
Sbjct: 95  MLLASESDEALLHRRIAEMKENQCEVAVEDIMSLLIFHKFSEIRAPLVPKLSRCLYNGRL 154

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI PSKDWELESIH  EVL+MIREH++TV GL+A  SVT+SWATT++++  LGR+YVASI
Sbjct: 155 EILPSKDWELESIHTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQFLLGRIYVASI 214

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKS SLRY+LE  L  A+ D+H  HR +L F +   YG  ++ + G ++N + I 
Sbjct: 215 LYGYFLKSVSLRYHLERNLNLANHDVHPGHRTNLSFKDMCPYGF-EDDIFGHLSNMKPI- 272

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
            G+G    E + E+LKCYVM F P +LQRCAKLRS+EAVNLV  +S ALF       +D+
Sbjct: 273 -GQGLIRQEEEIEDLKCYVMRFHPGSLQRCAKLRSKEAVNLVRSYSSALFNSEGFDSVDS 331

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 332 DDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKDH 372

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 172/281 (61%), Positives = 204/281 (72%), Gaps = 30/281 (10%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           MSLSSGSDE  LHRRIAQLKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRL
Sbjct: 108 MSLSSGSDEASLHRRIAQLKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRL 167

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EIWPSKDWELESIH  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASI
Sbjct: 168 EIWPSKDWELESIHSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASI 227

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKSASLR+ LE  L+    DLH +             G  ++ ++GC   T +  
Sbjct: 228 LYGYFLKSASLRHQLECSLS----DLHGS-------------GYLKSPILGCSFTTSTAQ 270

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
           +          ++ L+ Y+ GFDPETLQRCAK R+ EA NL+EK S ALFG       ++
Sbjct: 271 IS--------SKQQLRHYISGFDPETLQRCAKPRTEEARNLIEKQSLALFGTE-----ES 317

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           DE I+TSFSSLKRLVLEA+AFG+FLWD E Y D  YKLKEN
Sbjct: 318 DETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 358

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max]

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 165/281 (58%), Positives = 204/281 (72%), Gaps = 22/281 (7%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           M LS  SDE  LHRRIAQ+KE+E   A+ DVMY+LILYKFSEIRV LVPKLS C+Y+GRL
Sbjct: 92  MHLSQHSDEALLHRRIAQVKENESMIAIADVMYLLILYKFSEIRVNLVPKLSSCLYDGRL 151

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EI PSKDW+LESIH  EVL++IR+H+STV GLR+N SV +SW TT I+++ L RVYVASI
Sbjct: 152 EILPSKDWDLESIHSLEVLDIIRKHVSTVTGLRSNPSVRESWETTPIRQVWLARVYVASI 211

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKS SLRY LE  L+ +  D H  H+    F + +  G K  + +          
Sbjct: 212 LYGYFLKSVSLRYNLERSLSLSDHDFHHGHKIGPSFHDMYHSGAKDEEEI---------- 261

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
                       E+LKCYV GF P + +RCAKLRS+EAV+LVE HS ALFGDG++GL   
Sbjct: 262 ------------EDLKCYVTGFHPGSFERCAKLRSKEAVHLVESHSNALFGDGKSGLSQH 309

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           D++I+TSFSSL+RLVLEA+AFGSFLW+ E+Y D+VYKLK+ 
Sbjct: 310 DDIIVTSFSSLRRLVLEAVAFGSFLWETEDYIDSVYKLKDQ 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397912|ref|NP_566302.1| uncharacterized protein [Arabidopsis thaliana] gi|6041833|gb|AAF02142.1|AC009853_2 unknown protein [Arabidopsis thaliana] gi|6642634|gb|AAF20215.1|AC012395_2 unknown protein [Arabidopsis thaliana] gi|14596187|gb|AAK68821.1| Unknown protein [Arabidopsis thaliana] gi|21593217|gb|AAM65166.1| unknown [Arabidopsis thaliana] gi|22136074|gb|AAM91115.1| unknown protein [Arabidopsis thaliana] gi|332641006|gb|AEE74527.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  325 bits (834), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 171/281 (60%), Positives = 201/281 (71%), Gaps = 30/281 (10%)

Query: 1   MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
           MSLSSGSDE  LHRRIA+LKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRL
Sbjct: 106 MSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRL 165

Query: 61  EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
           EIWPSKDWELESI+  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASI
Sbjct: 166 EIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASI 225

Query: 121 LYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSIS 180
           LYGYFLKSASLR+ LE  L+  H   +L                 ++ + GC       S
Sbjct: 226 LYGYFLKSASLRHQLECSLSDIHGSGYL-----------------KSPIFGC-------S 261

Query: 181 LGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDT 240
              GT     KQ+ L+ Y+  FDPETLQRCAK R+ EA NL+EK S ALFG       ++
Sbjct: 262 FTTGTAQISNKQQ-LRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTE-----ES 315

Query: 241 DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 281
           DE I+TSFSSLKRLVLEA+AFG+FLWD E Y D  YKLKEN
Sbjct: 316 DETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2079626	368	AT3G07310 "AT3G07310" [Arabido	0.508	0.388	0.741	3.6e-82
TAIR|locus:2152516	344	AT5G48590 "AT5G48590" [Arabido	0.505	0.412	0.727	1.2e-75
TAIR|locus:2088490	427	AT3G17800 "AT3G17800" [Arabido	0.914	0.601	0.407	7.9e-46
TAIR|locus:2198055	423	AT1G48450 "AT1G48450" [Arabido	0.918	0.609	0.410	1.3e-45
TAIR|locus:2031760	406	AT1G32160 "AT1G32160" [Arabido	0.946	0.655	0.338	2.1e-36

TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
 Identities = 106/143 (74%), Positives = 122/143 (85%)

Query:     1 MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
             MSLSSGSDE  LHRRIA+LKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRL
Sbjct:   106 MSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRL 165

Query:    61 EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
             EIWPSKDWELESI+  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASI
Sbjct:   166 EIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASI 225

Query:   121 LYGYFLKSASLRYYLEECLASAH 143
             LYGYFLKSASLR+ LE  L+  H
Sbjct:   226 LYGYFLKSASLRHQLECSLSDIH 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
 Identities = 104/143 (72%), Positives = 116/143 (81%)

Query:     1 MSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRL 60
             M LS GSDE  LHRRIAQLKE +CQ A+ED+MYMLILYKFSEIRV LVPKL  CIYNGRL
Sbjct:   102 MFLSYGSDEASLHRRIAQLKESDCQIAIEDIMYMLILYKFSEIRVPLVPKLPSCIYNGRL 161

Query:    61 EIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASI 120
             EI PSKDWELESIH F+VLE+I+EH + VI LR N S+TD  ATTEI + RL +VY AS+
Sbjct:   162 EISPSKDWELESIHSFDVLELIKEHSNAVISLRVNSSLTDDCATTEIDKNRLSKVYTASV 221

Query:   121 LYGYFLKSASLRYYLEECLASAH 143
             LYGYFLKSASLR+ LE C  S H
Sbjct:   222 LYGYFLKSASLRHQLE-CSLSQH 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 112/275 (40%), Positives = 161/275 (58%)

Query:    12 LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIY-NGRLEIWPSKDWEL 70
             L+RRIA+LKE+E +  +E+++Y L++ KF E  V LVP +S     +GR++ WP+K  +L
Sbjct:   156 LYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKL 215

Query:    71 ESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSAS 130
             E +H  E+ EMI  H++ ++G R      D  +  +I +LR+G+VY AS++YGYFLK   
Sbjct:   216 ERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRVGQVYAASVMYGYFLKRVD 271

Query:   131 LRYYLEECLA--SAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGH 188
              R+ LE+ +       D   T     +    +   +  +  VG      S    +G  G 
Sbjct:   272 QRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHPEVGAFAGGVS---AKGF-GS 327

Query:   189 ELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT-----GLLDT--D 241
             E+K   L+ YVM FD ETLQR A +RSREAV ++EKH+ ALFG  +      G +D+  D
Sbjct:   328 EIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALFGKPEIVITPEGTVDSSKD 387

Query:   242 EVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
             E I  SF  +KRLVLEA+ FGSFLWD E + DA Y
Sbjct:   388 EQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARY 422

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010224 "response to UV-B" evidence=IGI;IEP

TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 117/285 (41%), Positives = 165/285 (57%)

Query:    12 LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKL--SRCIYNGRLEIWPSKDWE 69
             L+RRIA++KE E + A+E+++Y L++ KF +  V LVP +  S    +GR++ WP+ D E
Sbjct:   141 LYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGE 200

Query:    70 LESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSA 129
             LE +H  EV EMI+ H+S ++  R +    D  A  +I +L +G+VY AS++YGYFLK  
Sbjct:   201 LERLHSPEVYEMIQNHLSIILKNRTD----DLTAVAQISKLGVGQVYAASVMYGYFLKRI 256

Query:   130 SLRYYLEECL-----------ASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQS 178
               R+ LE+ +            S  Q      RN  +  E     +  NQ VG       
Sbjct:   257 DQRFQLEKTMRILPGGSDEGETSIEQAGRDVERNFYEEAEETYQAVSSNQDVGSF--VGG 314

Query:   179 ISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT--- 235
             I+   G +  ++KQ  LK YVM FD ETLQR A +RSRE+V ++EKH+ ALFG  +    
Sbjct:   315 INASGGFSS-DMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVIT 373

Query:   236 --GLLDT--DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
               G +D+  DE I  SF  LKRLVLEA+ FGSFLWD E + D+ Y
Sbjct:   374 PQGTIDSSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRY 418

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 96/284 (33%), Positives = 161/284 (56%)

Query:     5 SGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYN-GRLEIW 63
             S S +  L +RI+++++ E +  + +++Y L++++F E  + ++P++       GR+++W
Sbjct:   124 SSSTQDILQKRISEVRDKERRKTLAEIIYCLVVHRFVEKGISMIPRIKPTSDPAGRIDLW 183

Query:    64 PSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYG 123
             P+++ +LE IH  +  EMI+ H+S+V+G     +V    +  +I +++LG++Y AS +YG
Sbjct:   184 PNQEEKLEVIHSADAFEMIQSHLSSVLG--DGPAVGPLSSIVQIGKIKLGKLYAASAMYG 241

Query:   124 YFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVN----NTQSI 179
             YFL+    RY LE  + +  +    T R   + P    Y L     +  +     +    
Sbjct:   242 YFLRRVDQRYQLERTMNTLPKRPEKT-RERFEEPSP-PYPLWDPDSLIRIQPEEYDPDEY 299

Query:   180 SLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDG-----Q 234
             ++ R  N  E     L+ YV   D +TLQR A +RS+EA+ L+EK + ALFG       +
Sbjct:   300 AIQR--NEDESSSYGLRSYVTYLDSDTLQRYATIRSKEAMTLIEKQTQALFGRPDIRILE 357

Query:   235 TGLLDT--DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 276
              G LDT  DEV+  S S L  LVLEA+AFGSFLWD+E Y ++ Y
Sbjct:   358 DGKLDTSNDEVLSLSVSGLAMLVLEAVAFGSFLWDSESYVESKY 401


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      281       281   0.00083  115 3  11 22  0.48    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  226 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.43u 0.12s 23.55t   Elapsed:  00:00:01
  Total cpu time:  23.43u 0.12s 23.55t   Elapsed:  00:00:01
  Start:  Fri May 10 04:23:57 2013   End:  Fri May 10 04:23:58 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002530 hypothetical protein (275 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	1e-14

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 69  ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 128
            L      EVLE +R ++S ++G            T +  R  L ++  +S++ GYFL++
Sbjct: 17  RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73

Query: 129 ASLRYYLEECL 139
           A  R  LE  L
Sbjct: 74  AEQRLELERSL 84

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.94
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	97.77

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.94  E-value=3.2e-27  Score=185.30  Aligned_cols=84  Identities=30%  Similarity=0.413  Sum_probs=79.6

Q ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCcccccCCccccCCCcchhhcccCchHHHHHHHHHHHHhh
Q 023478           11 PLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVI   90 (281)
Q Consensus        11 ~LyrRIAevKe~Err~alEdImY~lIv~KF~e~~V~mvP~ls~~~~~Grl~~wp~~~~~Le~ihS~Ev~emI~~hl~~vL   90 (281)
                      +||++|++++. |+..+++|                                          +|||||+|+|++||.++|
T Consensus         2 ~L~~yi~~l~p-e~~~~l~~------------------------------------------~~s~ev~e~m~~~v~~ll   38 (86)
T PF05542_consen    2 DLLQYIQSLKP-ERIQQLSE------------------------------------------PASPEVLEAMKQHVSGLL   38 (86)
T ss_pred             hHHHHHHHCCH-HHHHHhhc------------------------------------------cCCHHHHHHHHHHHHHHH
Confidence            69999999999 99999998                                          899999999999999999


Q ss_pred             ccc-cCCCCCCCcceEeechhhhhhHHHHHhhhhHhhhhhhhHhHHHHHHh
Q 023478           91 GLR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA  140 (281)
Q Consensus        91 G~~-~~~~~~~~~~~~~isr~~Lg~vyAAsmM~GYFLr~~eqR~~LE~sl~  140 (281)
                      |++ |++.|+   ++++++|++||+||+++||+|||||++|+|++||++|+
T Consensus        39 G~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~   86 (86)
T PF05542_consen   39 GNLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK   86 (86)
T ss_pred             cCCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            999 877665   89999999999999999999999999999999999985

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=97.77  E-value=0.0001  Score=58.07  Aligned_cols=76  Identities=26%  Similarity=0.369  Sum_probs=69.0

Q ss_pred             hhhhhhhcCCHHHHHHHhhhhhHHHHHHHHHhhhhhccCCCCCCCCCCceEEechhhhHHHHHHHHhhhhhhhhhhh
Q 023478          194 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEE  270 (281)
Q Consensus       194 ~Lr~YVm~fD~eTLqr~A~irSkEav~liEkht~ALFG~~~~g~~~~dE~i~isf~~LkrLVLEAvAFGSFLwDvEs  270 (281)
                      .|=.||.+.+|+++++-++..|.|++..|++|+..+-|.-. -....+-.|.++-..|-+|..=++.+|=|||.+|-
T Consensus         2 ~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~-p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~   77 (86)
T PF05542_consen    2 DLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLS-PSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQ   77 (86)
T ss_pred             hHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCC-CcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHH
Confidence            57789999999999999999999999999999999999875 23456678999999999999999999999999884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00