Citrus Sinensis ID: 023538

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccHHHHHHcccccccccccccccccHHHHccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccEEEEccccHHHHHHHcccccHHHHHHHHHHccccHHHHccccHHHHHHcccccccccccccccccccEEcccccccccHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MYRFSNTVIGFLNLFTLLASIPIIgaglwmarssttcesflqtpLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVvtsrgggvqvpgrvykeyhlqdyspwlrnrvkdpnywsTIRSCllgsktcaklalwtpldylerdmtpiqsgcckpptscnynmptmaqdpdcyrwnnaptllcyecdsckagvledVRRDWHKLSVLNIVMLVVLIGIYSIGccafqntrraqtdypygenqmtkvrprwdYYWWRWWKDTRERLW
Flexible Loop (DISEMBL)
MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEyhlqdyspwlrnrvkdpNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNtrraqtdypygenqmtkvrprwdyyWWRWWKDTRERLW
Low Complexity Region (SEG)
MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPrwdyywwrwwkdTRERLW
Disordered region (IsUnstruct)
***FSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKD******
Disordered Region (DISOPRED)
**RFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRR*************KVRPRWDYYWWRWWKDTR*R**
Disordered Region (DISEMBL)
MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW
Disordered Region (DISPRO)
**RFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRE*L*
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	281	2.2.26 [Sep-21-2011]
Q9C7C1	282	Tetraspanin-6 OS=Arabidop	yes	no	1.0	0.996	0.709	1e-107
Q84WF6	281	Tetraspanin-5 OS=Arabidop	no	no	0.989	0.989	0.626	1e-102
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.914	0.944	0.413	4e-65
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	no	no	0.928	0.915	0.433	5e-65
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	no	no	0.886	0.912	0.431	5e-64
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.875	0.935	0.426	7e-62
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.921	0.792	0.436	3e-54
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.879	0.911	0.389	1e-50
Q9FIQ5	269	Protein TORNADO 2 OS=Arab	no	no	0.900	0.940	0.433	4e-49
Q9ZUN5	270	Tetraspanin-2 OS=Arabidop	no	no	0.868	0.903	0.430	4e-46

>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1

 Score =  389 bits (999), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/282 (70%), Positives = 237/282 (84%), Gaps = 1/282 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIG LNL TLLASIPIIG  L+ ARSSTTCE+FLQTPLLVIGF++LI+SLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACFNVAWALWVYLVVM+FLIATLM LT+FG VVTS+GGGV+VPGR+YKEY L DY PW
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LR RV+DP YW++IRSC+L SKTC K+  WT LDY +RDMT +QSGCCKPPT+C Y    
Sbjct: 121 LRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV 180

Query: 181 MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCA 240
           +    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+NI++LV+LI +Y+ GCCA
Sbjct: 181 VDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCA 240

Query: 241 FQNTRRAQTDY-PYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           F NTR A   Y P  +N+MT+VRPRWDYYWWRWW + +E+L+
Sbjct: 241 FHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKEQLY 282

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1

 Score =  370 bits (950), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/281 (62%), Positives = 224/281 (79%), Gaps = 3/281 (1%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           M R SNTVIGFLN+ TL++SI ++G+ LWM RS TTCE FLQ PLL++G  +LI+S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           +GAC +VAW LWVYL  M+F+I  LM LT+FGF+VTS  GGV V GRVYKE+ L+ Y PW
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           L+ RV D NYW TI++CLLGS TC+KLALWTPLDYL++D++P+QSGCCKPPTSC YN  T
Sbjct: 121 LKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYNTDT 180

Query: 181 -MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCC 239
            + QDPDCYRWNNA T+LCY+CD+C+AGVLE VRRDWHKLS++N+++++ LI +Y +GCC
Sbjct: 181 VIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCC 240

Query: 240 AFQNTRRAQT-DYPYGENQMTKVRPRWDYYWWRWWKDTRER 279
           AF+N +R Q   +PYG   M+K RP W+  W RWW   R+R
Sbjct: 241 AFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHG-RDR 280

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  248 bits (632), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 112/271 (41%), Positives = 171/271 (63%), Gaps = 14/271 (5%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAG 59
           M RFSN+++G LN F  L S+PI+  G+W++ +++T CE FL  P++ +G  ++II++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 60  FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
            +G+C  V W LW YL VM FLI  ++  TIF FVVTS+G G  + G+ YKEY L+ YS 
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTP----LDYLERDMTPIQSGCCKPPTSCN 175
           WL+ RV +  +W++IRSCL  SK C  L L T      D+ + D+T  +SGCCKP   C+
Sbjct: 121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query: 176 YNMPTMA---------QDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
           +   T           ++ DC  W+N    LCY C +CKAG L++++  W +++++NI+ 
Sbjct: 181 FTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIF 240

Query: 227 LVVLIGIYSIGCCAFQNTRRAQTDYPYGENQ 257
           LV+L+ +Y++GCCAF+N +  +     G N 
Sbjct: 241 LVLLVVVYAMGCCAFRNNKEDRYGRSNGFNN 271

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score =  248 bits (632), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/279 (43%), Positives = 174/279 (62%), Gaps = 18/279 (6%)

Query: 3   RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
           R SN +IG +N  T L SIPI+G G+W++   +ST C  FLQ PL+VIG  ++++SLAGF
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
            GAC+   + +W+YLVVML +IA L+   IF + VT +G G  V  R Y +Y+L+DYS W
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL------WTPLDYLERDMTPIQSGCCKPPTSC 174
           L++RV D +YW  I SCL  S  C K+         T   +  R ++P++SGCCKPPT C
Sbjct: 122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query: 175 NYNMPT----------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
            ++             +  + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+NI
Sbjct: 182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRP 263
           V+L++L+  Y I   A++N +R   D P GE +MTK  P
Sbjct: 242 VVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  244 bits (623), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 114/264 (43%), Positives = 169/264 (64%), Gaps = 15/264 (5%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAG 59
           M R SN ++G LN    L SIPI+  G+W++ + ST CE FL  P++ +G  ++++++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 60  FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
            IG+C  V W LWVYL VM  LI  +  +T+F FVVT++G G  + G+ YKEY L DYS 
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLA---LWTPLD-YLERDMTPIQSGCCKPPTSCN 175
           WL+ RV++   W+ IRSCL+ SK C+KL    +  P++ + +  +T +QSGCCKP   C 
Sbjct: 121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query: 176 YN----------MPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIV 225
           +                 +PDC  W+NA   LC++C SCKAG+L++V+  W K++++NIV
Sbjct: 181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query: 226 MLVVLIGIYSIGCCAFQNTRRAQT 249
            LV LI +YS+GCCAF+N +R  +
Sbjct: 241 FLVFLIIVYSVGCCAFRNNKRDDS 264

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score =  237 bits (605), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 111/260 (42%), Positives = 163/260 (62%), Gaps = 14/260 (5%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTT-CESFLQTPLLVIGFVVLIISLAG 59
           M + SN ++G LN FT L SIPI+ AG+W+ +++ T CE FL  P++V+G  ++ +S+AG
Sbjct: 1   MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 60  FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
            +GAC  V+  LW+YL  M  LI      TIF F VT+RG G  +  R YKEYH+ DYS 
Sbjct: 61  LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCA----KLALWTPLDYLERDMTPIQSGCCKPPTSCN 175
           WL+ RV +   W  IRSCL+ S  C+    + A     D+ + ++  +QSGCCKP   CN
Sbjct: 121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query: 176 Y---------NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
           +           P   ++ DC  W+N P  LCY+C++CKAG+L++++  W K++ +NIV 
Sbjct: 181 FTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query: 227 LVVLIGIYSIGCCAFQNTRR 246
           L+ LI +YS+GCCAF+N R+
Sbjct: 241 LIFLIIVYSVGCCAFRNNRK 260

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score =  211 bits (538), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/277 (43%), Positives = 171/277 (61%), Gaps = 18/277 (6%)

Query: 3   RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
           R  + +IG +N FT L SIPI+G G+W++   +ST C  FLQ PL++IG  +++ISLAG 
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
            GAC+   + +W+YL  M F+IA L+  TIF +VVT +G G  V  R Y +Y+L DYS W
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL------WTPLDYLERDMTPIQSGCCKPPTSC 174
           L++RV D  YW  I SC+  S  C K+         T   +  R+++P++SGCCKPPT C
Sbjct: 122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query: 175 NYNM----------PTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
            Y              +  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+NI
Sbjct: 182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query: 225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKV 261
           V++++L+  Y I C A+QN +R   D P GE +MT +
Sbjct: 242 VVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score =  199 bits (507), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 150/267 (56%), Gaps = 20/267 (7%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWM--ARSSTTCESFLQTPLLVIGFVVLIISLA 58
           M+R SN ++G  N   +L     IG  ++M   +  T CES ++ PLL  G ++ ++SL 
Sbjct: 1   MFRVSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLL 60

Query: 59  GFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYS 118
           G IG+CF    A+  YL+++   I  LM  +IF F VT++G G  V GR YKEY   D+S
Sbjct: 61  GVIGSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFS 120

Query: 119 PWLRNRVKDPNYWSTIRSCLLGSKTCAKLA----LWTPLDYLERDMTPIQSGCCKPPTSC 174
            WL   V     W  IRSCL  +  C  L+          +  ++++PIQSGCCKPP+ C
Sbjct: 121 TWLNGFVGGKR-WVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDC 179

Query: 175 NY-------------NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSV 221
           N+             N   +A++ DC  W+N  T LC+ C++CKAGVL ++R  W  L V
Sbjct: 180 NFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLV 239

Query: 222 LNIVMLVVLIGIYSIGCCAFQNTRRAQ 248
            NI +L++LI +YS GCCA +N R A+
Sbjct: 240 FNICLLILLITVYSCGCCARRNNRTAR 266

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1

 Score =  195 bits (495), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 156/265 (58%), Gaps = 12/265 (4%)

Query: 4   FSNTVIGFLNLFTLLASIPIIGAGLWMARSS-TTCESFLQTPLLVIGFVVLIISLAGFIG 62
            SN VIG +N  T+L SIP+IGAG+W+A  +  +C   LQ P++++G ++L++ LAGFIG
Sbjct: 3   LSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIG 62

Query: 63  ACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLR 122
             + + W L VYL+ ML LI  L  L  F ++VT RG G   P R Y EY LQD+S WLR
Sbjct: 63  GFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLR 122

Query: 123 NRVKDPNYWSTIRSCLLGSKTCAKLALWTPL--DYLERDMTPIQSGCCKPPTSCNYNM-- 178
            RV+    W  IR+CL  +  C +L     L  D+    + PIQSGCCKPPT C +    
Sbjct: 123 RRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVN 182

Query: 179 PT-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLI 231
           PT       M+ D DC  W+N    LCY CDSCKAG+L +++ DW K  +  ++ L+ LI
Sbjct: 183 PTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLI 242

Query: 232 GIYSIGCCAFQNTRRAQTDYPYGEN 256
            +Y IGCCAF+N         Y + 
Sbjct: 243 IVYIIGCCAFRNAETEDIFRKYKQG 267

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1

 Score =  185 bits (469), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/260 (43%), Positives = 157/260 (60%), Gaps = 16/260 (6%)

Query: 4   FSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAGFIG 62
            +N +   LNL  LL SIPI  +G+W+A +    C + L+ P++V+G ++L++S  GFIG
Sbjct: 3   LANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIG 62

Query: 63  ACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLR 122
           A       L VYL  M  LI  L+ + IF FVVT   G  +VPGR YKEY L+ +S WL+
Sbjct: 63  AYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLK 122

Query: 123 NRVKDPNYWSTIRSCLLGSKTCAKLA---LWTPLDYLERDMTPIQSGCCKPPTSCNYNM- 178
             V D   W  +R+CL  +  C KL    +     +    +TP+QSGCCKPPT+C YN  
Sbjct: 123 ENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFV 182

Query: 179 -PT-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVL 230
            PT       MA D DCY W+N  + LCY C+SCKAG+L ++R++W K +++ I+ +VVL
Sbjct: 183 NPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVL 242

Query: 231 IGIYSIGCCAFQNTRRAQTD 250
           I +Y I C AF+N   AQT+
Sbjct: 243 IWVYVIACSAFRN---AQTE 259

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
225449096	282	PREDICTED: uncharacterized protein LOC10	1.0	0.996	0.847	1e-141
255588257	271	conserved hypothetical protein [Ricinus	0.957	0.992	0.896	1e-141
224109738	270	predicted protein [Populus trichocarpa]	0.957	0.996	0.896	1e-141
356535656	283	PREDICTED: uncharacterized protein LOC10	1.0	0.992	0.826	1e-138
358248982	283	uncharacterized protein LOC100812912 [Gl	1.0	0.992	0.823	1e-138
255637860	283	unknown [Glycine max]	1.0	0.992	0.816	1e-137
356498547	283	PREDICTED: uncharacterized protein LOC10	1.0	0.992	0.777	1e-127
356559460	283	PREDICTED: uncharacterized protein LOC10	1.0	0.992	0.773	1e-126
388498460	283	unknown [Medicago truncatula]	1.0	0.992	0.742	1e-124
449449342	286	PREDICTED: uncharacterized protein LOC10	1.0	0.982	0.814	1e-124

>gi|225449096|ref|XP_002276217.1| PREDICTED: uncharacterized protein LOC100242744 [Vitis vinifera]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 239/282 (84%), Positives = 263/282 (93%), Gaps = 1/282 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIG GLWMARSSTTCESFLQTPLLV+GFVVLIISLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACFNVAWALW+YLVVMLFLI TL+ LTIFGFVVTS+GGGV+VPGRVYKEY L+ YS W
Sbjct: 61  IGACFNVAWALWLYLVVMLFLIGTLLGLTIFGFVVTSQGGGVEVPGRVYKEYQLEKYSSW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           L++R+KDP+YWSTIRSC+LGS TCA++A WTPLDYLERDMTPIQSGCCKPPTSCNY   T
Sbjct: 121 LKSRIKDPHYWSTIRSCILGSNTCAQIASWTPLDYLERDMTPIQSGCCKPPTSCNYATAT 180

Query: 181 -MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCC 239
            M QD DCYRWNNAP LLCYECDSCKAGVLE +RRDWHKLSVLNIVMLV+LIGIYSIGCC
Sbjct: 181 MMTQDADCYRWNNAPNLLCYECDSCKAGVLEHIRRDWHKLSVLNIVMLVLLIGIYSIGCC 240

Query: 240 AFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           AF+NTRR++TDYPYGEN+M+KVRPRWD+YWWRWW D + +L+
Sbjct: 241 AFRNTRRSETDYPYGENRMSKVRPRWDFYWWRWWYDRKNQLY 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255588257|ref|XP_002534549.1| conserved hypothetical protein [Ricinus communis] gi|223525057|gb|EEF27833.1| conserved hypothetical protein [Ricinus communis]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/270 (89%), Positives = 260/270 (96%), Gaps = 1/270 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIG GLWMA+SSTTCESFLQTPLLV+GFVVLIISLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VAWALWVYLVVMLFLIATLM LTIFGFVVTS+GGGV VPGRVYKEY L+DYSPW
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIATLMGLTIFGFVVTSQGGGVDVPGRVYKEYRLEDYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LR+RVKDP+YW TIRSC+LGS+TCAKLA WTPLDY+E+DM+ IQSGCCKPPTSCNYNM T
Sbjct: 121 LRDRVKDPDYWRTIRSCILGSRTCAKLASWTPLDYMEKDMSHIQSGCCKPPTSCNYNMAT 180

Query: 181 MA-QDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCC 239
           +  QDPDCYRWNN+PTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLV+LIGIYSIGCC
Sbjct: 181 LVPQDPDCYRWNNSPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVLLIGIYSIGCC 240

Query: 240 AFQNTRRAQTDYPYGENQMTKVRPRWDYYW 269
           AF+NTRRA+TDYPYGEN+MTKVRPRWDYYW
Sbjct: 241 AFRNTRRAETDYPYGENRMTKVRPRWDYYW 270

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109738|ref|XP_002315294.1| predicted protein [Populus trichocarpa] gi|222864334|gb|EEF01465.1| predicted protein [Populus trichocarpa]

 Score =  505 bits (1300), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/270 (89%), Positives = 257/270 (95%), Gaps = 1/270 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIG GLWMARSSTTCE FLQTPLLV+GFVVLIISLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCEGFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VAWALWVYLVVML LIATLM LTIFGFVVTS+GGGV+VPGRVYKEY L+DYSPW
Sbjct: 61  IGACFHVAWALWVYLVVMLLLIATLMGLTIFGFVVTSQGGGVEVPGRVYKEYRLEDYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LRNR+KDP+YW TIRSC+LGSKTCAKLA WTPLDYLE+DM+PIQSGCCKPPTSCNYNM T
Sbjct: 121 LRNRIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMAT 180

Query: 181 -MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCC 239
            + QDPDCYRWNN PTLLCYECDSCKAGVLEDVRRDW KLSVLNIVM+V+LIGIYS GCC
Sbjct: 181 AVPQDPDCYRWNNVPTLLCYECDSCKAGVLEDVRRDWRKLSVLNIVMVVLLIGIYSTGCC 240

Query: 240 AFQNTRRAQTDYPYGENQMTKVRPRWDYYW 269
           AFQNTRRA+TDYPYGEN+MTKVRPRWDYYW
Sbjct: 241 AFQNTRRAETDYPYGENRMTKVRPRWDYYW 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535656|ref|XP_003536360.1| PREDICTED: uncharacterized protein LOC100775780 [Glycine max]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/283 (82%), Positives = 260/283 (91%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCE+FLQTPLLVIGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCENFLQTPLLVIGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VA ALW+YLVVMLFLIA LM  TIFGF VTS+GGGV+VPGRVYKEY LQDYSPW
Sbjct: 61  IGACFHVACALWLYLVVMLFLIAALMGFTIFGFGVTSKGGGVEVPGRVYKEYRLQDYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LR R++DP YW+TIR C+LGSKTC KLA WTPLDY++RDM+PIQSGCCKPPT+C YN+ T
Sbjct: 121 LRKRIQDPRYWNTIRGCILGSKTCEKLASWTPLDYMQRDMSPIQSGCCKPPTACTYNVAT 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             M QDPDCYRWNNAP LLCYECDSCKAGVLED+R +WHKLSVL + MLV+LIGIYSIGC
Sbjct: 181 TMMTQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHKLSVLTVTMLVLLIGIYSIGC 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+NTRRA+TDYPYGEN+MTKVRPRWDY+WWRW  D RE+L+
Sbjct: 241 CAFRNTRRAETDYPYGENRMTKVRPRWDYHWWRWLHDRREQLY 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248982|ref|NP_001240229.1| uncharacterized protein LOC100812912 [Glycine max] gi|255643586|gb|ACU22683.1| unknown [Glycine max]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/283 (82%), Positives = 260/283 (91%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCE+FLQTPLLVIGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCENFLQTPLLVIGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VA ALW+YLVVMLFLIA LM LTIFGF VTS+GGGV+VPGRVYKEYHLQDYSPW
Sbjct: 61  IGACFHVACALWLYLVVMLFLIAALMGLTIFGFGVTSKGGGVEVPGRVYKEYHLQDYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LR R++DP YW+TIR C++GSKTC KLA WTPLDY++RDM+PIQSGCCKPPT+C YN+ T
Sbjct: 121 LRKRIQDPRYWNTIRGCIMGSKTCEKLATWTPLDYMQRDMSPIQSGCCKPPTACTYNVAT 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             M QDPDCYRWNNAP LLCYECDSCKAGVLED+R +WHKLSVL + MLV+LIGIYSIGC
Sbjct: 181 MMMTQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHKLSVLTVTMLVLLIGIYSIGC 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+NTRRA+TDYPY EN+MTKVRPRWDY+ WRW  D RE+L+
Sbjct: 241 CAFRNTRRAETDYPYAENRMTKVRPRWDYHCWRWLHDRREQLY 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637860|gb|ACU19249.1| unknown [Glycine max]

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/283 (81%), Positives = 257/283 (90%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSS TCE+FLQTPLLVIGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSATCENFLQTPLLVIGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VA ALW+YLVVMLFLIA L+  TIFGF VTS+GGGV+VPGRVYKEY LQDYSPW
Sbjct: 61  IGACFHVACALWLYLVVMLFLIAALVGFTIFGFGVTSKGGGVEVPGRVYKEYRLQDYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LR R++DP YW+TIR C+LGSKTC KLA WTPLDY++RDM PIQSGCCKPPT+C YN+ T
Sbjct: 121 LRKRIQDPRYWNTIRGCILGSKTCEKLASWTPLDYMQRDMFPIQSGCCKPPTACTYNVAT 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             M QDPDCYRWNNAP LLCYECDSCKAGVLED+R +WHKLSVL + MLV+ IGIYSIGC
Sbjct: 181 TMMTQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHKLSVLTVTMLVLFIGIYSIGC 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+NTRRA+TDYPYGEN+MTKVRPRWDY+WWRW  D RE+L+
Sbjct: 241 CAFRNTRRAETDYPYGENRMTKVRPRWDYHWWRWLHDRREQLY 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498547|ref|XP_003518112.1| PREDICTED: uncharacterized protein LOC100810507 [Glycine max]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/283 (77%), Positives = 251/283 (88%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           M RFSNTVIGFLN FTLLASIPIIGAGLWMARS+TTCE+F QTPLLVIGFVVL+ISLAGF
Sbjct: 1   MQRFSNTVIGFLNFFTLLASIPIIGAGLWMARSTTTCENFFQTPLLVIGFVVLVISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VAWALWVYLV+M+F+IA L+   +FGFVVT +GGGV+VPGR YKEY L  YSPW
Sbjct: 61  IGACFHVAWALWVYLVIMVFIIAALLGFAVFGFVVTEQGGGVEVPGRAYKEYRLDRYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LRNR+KDP YWSTIRSC+LGS TCAKLA WTPLDY++RDM+PIQSGCCKPPT C+YN  T
Sbjct: 121 LRNRIKDPQYWSTIRSCILGSNTCAKLAFWTPLDYVQRDMSPIQSGCCKPPTGCSYNEET 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             + QDPDCYRWNNAPTLLCY+CDSCKAGVLE++RR WH +SVLN+V+LV LIGIYSI  
Sbjct: 181 VVVTQDPDCYRWNNAPTLLCYDCDSCKAGVLENIRRGWHNISVLNVVVLVFLIGIYSIAF 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+N RRAQTDYP+G N+MTKV+PRWDYY WRWW + +E L+
Sbjct: 241 CAFRNARRAQTDYPHGVNRMTKVKPRWDYYCWRWWYNKKEELF 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559460|ref|XP_003548017.1| PREDICTED: uncharacterized protein LOC100797342 [Glycine max]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/283 (77%), Positives = 252/283 (89%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           M RFSNTVIGFLN FTLLASIPIIGAGLWMARS+ TCE+F QTPLLVIGFVVL+ISL G 
Sbjct: 1   MQRFSNTVIGFLNFFTLLASIPIIGAGLWMARSTLTCENFFQTPLLVIGFVVLVISLTGL 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VAWALWVYLV+M+F+IATL+  TIFGFVVT +GGGV+VPGR YKEY L+ YSPW
Sbjct: 61  IGACFHVAWALWVYLVIMVFIIATLLGFTIFGFVVTEQGGGVEVPGRAYKEYRLERYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           LRNR++DP YWSTIRSC+LGS TCAKLA WTPLDY++RDM+PIQSGCCKPPT+C YN  T
Sbjct: 121 LRNRIQDPQYWSTIRSCILGSNTCAKLAFWTPLDYVQRDMSPIQSGCCKPPTACMYNEET 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             +  D DCYRWNNAPTLLCY+C+SCKAGVLE++RRDWH +SVLN+V+LV LIGIYSI C
Sbjct: 181 VVVTPDSDCYRWNNAPTLLCYDCNSCKAGVLENIRRDWHNISVLNVVVLVFLIGIYSIAC 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+N RRAQTDYP+GEN+MTKV+PRWDYY WRWW + +E L+
Sbjct: 241 CAFRNARRAQTDYPHGENRMTKVKPRWDYYCWRWWYNKKEELF 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498460|gb|AFK37296.1| unknown [Medicago truncatula]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/283 (74%), Positives = 254/283 (89%), Gaps = 2/283 (0%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           M+RFSN+VIGFLN FTLLASIPIIGAGLW++RS+T CE+F Q PLL+IGF+VL+ISL GF
Sbjct: 1   MHRFSNSVIGFLNFFTLLASIPIIGAGLWISRSTTACENFFQEPLLIIGFIVLVISLVGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
           IGACF+VAWALWVYLVVML LI T++ LTIFGFVVT++GGGV+VPGR Y EYHLQ+YSPW
Sbjct: 61  IGACFHVAWALWVYLVVMLLLIGTIIGLTIFGFVVTTQGGGVEVPGRTYMEYHLQNYSPW 120

Query: 121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
           L+ R+KD  YWSTI+SC++GS TC+KLA WT LDY++RD++PIQSGCCKPPT+CN+NM T
Sbjct: 121 LKKRIKDHQYWSTIKSCIMGSNTCSKLASWTSLDYMQRDLSPIQSGCCKPPTTCNFNMET 180

Query: 181 --MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGC 238
             + QD DCYRWNNAP LLCY+CDSCKAGVLE++R DWHK+SVL++V+LV LIGIYSIGC
Sbjct: 181 TLVDQDIDCYRWNNAPNLLCYDCDSCKAGVLENIRTDWHKVSVLSVVILVFLIGIYSIGC 240

Query: 239 CAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           CAF+N RR++TDYP+GEN+M KVRPRWDYY WRWW D +E+L+
Sbjct: 241 CAFRNARRSETDYPHGENRMRKVRPRWDYYCWRWWHDKKEQLF 283

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449342|ref|XP_004142424.1| PREDICTED: uncharacterized protein LOC101205675 isoform 1 [Cucumis sativus] gi|449449344|ref|XP_004142425.1| PREDICTED: uncharacterized protein LOC101205675 isoform 2 [Cucumis sativus] gi|449487173|ref|XP_004157518.1| PREDICTED: uncharacterized protein LOC101226514 isoform 1 [Cucumis sativus] gi|449487176|ref|XP_004157519.1| PREDICTED: uncharacterized protein LOC101226514 isoform 2 [Cucumis sativus]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/286 (81%), Positives = 265/286 (92%), Gaps = 5/286 (1%)

Query: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
           MYRFSNT+IGFLNLFTL+ASIPIIG GLWMARSSTTCESFLQTPLLV+GFVVL++SLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPG-RVYKEYHLQDYSP 119
           IGACFNVAWALWVYLVVMLFLIATLM LTIFGF+VT+ GGGV+ PG RVY+EYHL+ YSP
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNM- 178
           WLR R+KDP YW TIRSCLLGSKTCA+LA WTPLDYL+RDM+PIQSGCCKPPT+CNY+M 
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 179 ---PTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYS 235
                ++QDPDCYRWNNAPTLLCYECDSCKAGVLE+VRRDWHKLSVLN+V++++LIG+Y 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 236 IGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281
           +GCCAF+NT+RA+TDYPYG NQMTKVRPRWDYYWWRW  D +E+L+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWWRWLHDKKEQLY 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2099272	282	TET6 "AT3G12090" [Arabidopsis	0.935	0.932	0.712	4.4e-107
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.921	0.792	0.440	2.6e-63
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.875	0.901	0.444	1.1e-62
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.928	0.915	0.437	1.8e-62
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.871	0.900	0.428	3.8e-62
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.875	0.935	0.434	1.5e-60
TAIR|locus:2178570	269	TRN2 "AT5G46700" [Arabidopsis	0.850	0.888	0.454	7.5e-57
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.864	0.9	0.436	4.3e-54
TAIR|locus:2038488	284	TET10 "tetraspanin10" [Arabido	0.807	0.799	0.355	9.1e-45
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.782	0.811	0.369	2.3e-39

TAIR|locus:2099272 TET6 "AT3G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
 Identities = 188/264 (71%), Positives = 221/264 (83%)

Query:     1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60
             MYRFSNTVIG LNL TLLASIPIIG  L+ ARSSTTCE+FLQTPLLVIGF++LI+SLAGF
Sbjct:     1 MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query:    61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
             IGACFNVAWALWVYLVVM+FLIATLM LT+FG VVTS+GGGV+VPGR+YKEY L DY PW
Sbjct:    61 IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPW 120

Query:   121 LRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPT 180
             LR RV+DP YW++IRSC+L SKTC K+  WT LDY +RDMT +QSGCCKPPT+C Y    
Sbjct:   121 LRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYEAGV 180

Query:   181 MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCA 240
             +    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+NI++LV+LI +Y+ GCCA
Sbjct:   181 VDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCA 240

Query:   241 FQNTRRAQTDY-PYGENQMTKVRP 263
             F NTR A   Y P  +N+MT+VRP
Sbjct:   241 FHNTRHAAHPYHPSDDNRMTRVRP 264

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 122/277 (44%), Positives = 173/277 (62%)

Query:     3 RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
             R  + +IG +N FT L SIPI+G G+W++   +ST C  FLQ PL++IG  +++ISLAG 
Sbjct:     2 RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query:    61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
              GAC+   + +W+YL  M F+IA L+  TIF +VVT +G G  V  R Y +Y+L DYS W
Sbjct:    62 AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGW 121

Query:   121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL------WTPLDYLERDMTPIQSGCCKPPTSC 174
             L++RV D  YW  I SC+  S  C K+         T   +  R+++P++SGCCKPPT C
Sbjct:   122 LKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDC 181

Query:   175 NYN-------MP---TMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
              Y        +P    +  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+NI
Sbjct:   182 GYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query:   225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKV 261
             V++++L+  Y I C A+QN +R   D P GE +MT +
Sbjct:   242 VVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 116/261 (44%), Positives = 171/261 (65%)

Query:     1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAG 59
             M R SN ++G LN    L SIPI+  G+W++ + ST CE FL  P++ +G  ++++++AG
Sbjct:     1 MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query:    60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
              IG+C  V W LWVYL VM  LI  +  +T+F FVVT++G G  + G+ YKEY L DYS 
Sbjct:    61 LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYST 120

Query:   120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLA---LWTPLD-YLERDMTPIQSGCCKPPTSCN 175
             WL+ RV++   W+ IRSCL+ SK C+KL    +  P++ + +  +T +QSGCCKP   C 
Sbjct:   121 WLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECG 180

Query:   176 Y---NMPTMAQD-------PDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIV 225
             +   N  T  ++       PDC  W+NA   LC++C SCKAG+L++V+  W K++++NIV
Sbjct:   181 FEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIV 240

Query:   226 MLVVLIGIYSIGCCAFQNTRR 246
              LV LI +YS+GCCAF+N +R
Sbjct:   241 FLVFLIIVYSVGCCAFRNNKR 261

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 122/279 (43%), Positives = 175/279 (62%)

Query:     3 RFSNTVIGFLNLFTLLASIPIIGAGLWMAR--SSTTCESFLQTPLLVIGFVVLIISLAGF 60
             R SN +IG +N  T L SIPI+G G+W++   +ST C  FLQ PL+VIG  ++++SLAGF
Sbjct:     2 RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query:    61 IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPW 120
              GAC+   + +W+YLVVML +IA L+   IF + VT +G G  V  R Y +Y+L+DYS W
Sbjct:    62 AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 121

Query:   121 LRNRVKDPNYWSTIRSCLLGSKTCAKLAL---WTP--LD-YLERDMTPIQSGCCKPPTSC 174
             L++RV D +YW  I SCL  S  C K+       P   D +  R ++P++SGCCKPPT C
Sbjct:   122 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDC 181

Query:   175 NYNMPT----------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNI 224
              ++             +  + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+NI
Sbjct:   182 GFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINI 241

Query:   225 VMLVVLIGIYSIGCCAFQNTRRAQTDYPYGENQMTKVRP 263
             V+L++L+  Y I   A++N +R   D P GE +MTK  P
Sbjct:   242 VVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 111/259 (42%), Positives = 167/259 (64%)

Query:     1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTT-CESFLQTPLLVIGFVVLIISLAG 59
             M RFSN+++G LN F  L S+PI+  G+W++  +TT CE FL  P++ +G  ++II++AG
Sbjct:     1 MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query:    60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
              +G+C  V W LW YL VM FLI  ++  TIF FVVTS+G G  + G+ YKEY L+ YS 
Sbjct:    61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSD 120

Query:   120 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTP----LDYLERDMTPIQSGCCKPPTSCN 175
             WL+ RV +  +W++IRSCL  SK C  L L T      D+ + D+T  +SGCCKP   C+
Sbjct:   121 WLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCD 180

Query:   176 YNMPTMA---------QDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
             +   T           ++ DC  W+N    LCY C +CKAG L++++  W +++++NI+ 
Sbjct:   181 FTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIF 240

Query:   227 LVVLIGIYSIGCCAFQNTR 245
             LV+L+ +Y++GCCAF+N +
Sbjct:   241 LVLLVVVYAMGCCAFRNNK 259

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 113/260 (43%), Positives = 164/260 (63%)

Query:     1 MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTT-CESFLQTPLLVIGFVVLIISLAG 59
             M + SN ++G LN FT L SIPI+ AG+W+ +++ T CE FL  P++V+G  ++ +S+AG
Sbjct:     1 MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query:    60 FIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSP 119
              +GAC  V+  LW+YL  M  LI      TIF F VT+RG G  +  R YKEYH+ DYS 
Sbjct:    61 LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSN 120

Query:   120 WLRNRVKDPNYWSTIRSCLLGSKTCA----KLALWTPLDYLERDMTPIQSGCCKPPTSCN 175
             WL+ RV +   W  IRSCL+ S  C+    + A     D+ + ++  +QSGCCKP   CN
Sbjct:   121 WLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCN 180

Query:   176 Y---NMPTMAQDP------DCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVM 226
             +   N  T  + P      DC  W+N P  LCY+C++CKAG+L++++  W K++ +NIV 
Sbjct:   181 FTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVF 240

Query:   227 LVVLIGIYSIGCCAFQNTRR 246
             L+ LI +YS+GCCAF+N R+
Sbjct:   241 LIFLIIVYSVGCCAFRNNRK 260

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2178570 TRN2 "AT5G46700" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 114/251 (45%), Positives = 154/251 (61%)

Query:     5 SNTVIGFLNLFTLLASIPIIGAGLWMARSST-TCESFLQTPLLVIGFVVLIISLAGFIGA 63
             SN VIG +N  T+L SIP+IGAG+W+A  +  +C   LQ P++++G ++L++ LAGFIG 
Sbjct:     4 SNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIGG 63

Query:    64 CFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRN 123
              + + W L VYL+ ML LI  L  L  F ++VT RG G   P R Y EY LQD+S WLR 
Sbjct:    64 FWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLRR 123

Query:   124 RVKDPNYWSTIRSCLLGSKTCAKLALWTPL--DYLERDMTPIQSGCCKPPTSCNYNM--P 179
             RV+    W  IR+CL  +  C +L     L  D+    + PIQSGCCKPPT C +    P
Sbjct:   124 RVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVNP 183

Query:   180 T-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIG 232
             T       M+ D DC  W+N    LCY CDSCKAG+L +++ DW K  +  ++ L+ LI 
Sbjct:   184 TYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLII 243

Query:   233 IYSIGCCAFQN 243
             +Y IGCCAF+N
Sbjct:   244 VYIIGCCAFRN 254

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0010015 "root morphogenesis" evidence=RCA;IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 113/259 (43%), Positives = 158/259 (61%)

Query:     5 SNTVIGFLNLFTLLASIPIIGAGLWMA-RSSTTCESFLQTPLLVIGFVVLIISLAGFIGA 63
             +N +   LNL  LL SIPI  +G+W+A +    C + L+ P++V+G ++L++S  GFIGA
Sbjct:     4 ANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGA 63

Query:    64 CFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRN 123
                    L VYL  M  LI  L+ + IF FVVT   G  +VPGR YKEY L+ +S WL+ 
Sbjct:    64 YKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLKE 123

Query:   124 RVKDPNYWSTIRSCLLGSKTCAKLAL-WTPLD--YLERDMTPIQSGCCKPPTSCNYNM-- 178
              V D   W  +R+CL  +  C KL   +   D  +    +TP+QSGCCKPPT+C YN   
Sbjct:   124 NVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFVN 183

Query:   179 PT-------MAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLI 231
             PT       MA D DCY W+N  + LCY C+SCKAG+L ++R++W K +++ I+ +VVLI
Sbjct:   184 PTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVLI 243

Query:   232 GIYSIGCCAFQNTRRAQTD 250
              +Y I C AF+N   AQT+
Sbjct:   244 WVYVIACSAFRN---AQTE 259

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2038488 TET10 "tetraspanin10" [Arabidopsis thaliana (taxid:3702)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 85/239 (35%), Positives = 144/239 (60%)

Query:     5 SNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGAC 64
             S  VI ++NL T+L ++ +I  G+WM+  +  C   L  P++ +G  + +IS+ GF+GAC
Sbjct:     6 STFVIRWVNLLTMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGAC 65

Query:    65 FNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNR 124
                   LW+YL V+L ++  ++  T+  F+VT+ G G   PG  YKEY L DYS W   +
Sbjct:    66 KRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQ 125

Query:   125 VKDPNYWSTIRSCLLGSKTCAKLAL-WTPLDYLER-DMTPIQSGCCKPPTSCNY------ 176
             + + + W  ++SCL+ S+ C KL+  +  +  L+  ++TPI++GCC+PP+ C Y      
Sbjct:   126 LNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNAS 185

Query:   177 ----NMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLI 231
                 +  +++ + DC  + N  T+ CY CDSCKAGV + ++ +W  +++ N+V+ VVLI
Sbjct:   186 YYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLI 244

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 88/238 (36%), Positives = 135/238 (56%)

Query:    28 LWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMA 87
             +++ +  T CES ++ PLL  G ++ ++SL G IG+CF    A+  YL+++   I  LM 
Sbjct:    30 MFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVSYLIILFGGIVALMI 89

Query:    88 LTIFGFVVTSRGGGVQVPGRVYKEYHLQDYSPWLRNRVKDPNYW---STIRSC-LLGSKT 143
              +IF F VT++G G  V GR YKEY   D+S WL   V    +    S +    +    +
Sbjct:    90 FSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFVGGKRWVGIRSCLAEANVCDDLS 149

Query:   144 CAKLALWTPLDYLERDMTPIQSGCCKPPTSCNY-------------NMPTMAQDPDCYRW 190
               +++      Y  ++++PIQSGCCKPP+ CN+             N   +A++ DC  W
Sbjct:   150 DGRVSQIADAFY-HKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSKNETAVAENGDCGTW 208

Query:   191 NNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYSIGCCAFQNTRRAQ 248
             +N  T LC+ C++CKAGVL ++R  W  L V NI +L++LI +YS GCCA +N R A+
Sbjct:   209 SNVQTELCFNCNACKAGVLANIREKWRNLLVFNICLLILLITVYSCGCCARRNNRTAR 266

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C7C1	TET6_ARATH	No assigned EC number	0.7092	1.0	0.9964	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018220001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (282 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	2e-27

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score =  105 bits (264), Expect = 2e-27
 Identities = 46/248 (18%), Positives = 88/248 (35%), Gaps = 36/248 (14%)

Query: 4   FSNTVIGFLNLFTLLASIPIIGAGLWMAR--------SSTTCESFLQTPLLVIGFVVLII 55
               ++  LNL  LL  + ++  G+W+          +       L   ++V+G ++L++
Sbjct: 1   CLKYLLFLLNLLFLLLGLALLAVGIWLLVIAKDYLAIALNDSIRALYILIIVLGVIILLV 60

Query: 56  SLAGFIGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPGRVYKEYHLQ 115
              G  GA       L  Y +++L L    +A  I  FV   +       G  YK+    
Sbjct: 61  GFLGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYRDKLESSLKEGLNYKDKS-- 118

Query: 116 DYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCN 175
                      D    +     L  S  C    + +  D+L+       S          
Sbjct: 119 ---------YNDDPNLTEAIDELQKSLECCG--VNSYTDWLDSQYFSPSSSNP------- 160

Query: 176 YNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYS 235
                   D DC  WNN  + L    + CK  +LE ++++   +  + + + V+ +    
Sbjct: 161 --------DSDCCCWNNDTSNLNIYTEGCKEKLLEFLKKNLKIIGGVGLGIAVIQLLGII 212

Query: 236 IGCCAFQN 243
           + CC  ++
Sbjct: 213 LACCLCRS 220

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
KOG3882	237	consensus Tetraspanin family integral membrane pro	100.0
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.93
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	99.54
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	99.5
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	99.5
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	99.48
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	99.47
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	99.47
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	99.46
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	99.46
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	99.45
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	99.43
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	99.43
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	99.39
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	99.37
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	99.34
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	99.28
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	99.21
cd03151	84	CD81_like_LEL Tetraspanin, extracellular domain or	98.7
PF05640	200	NKAIN: Na,K-Atpase Interacting protein; InterPro:	86.8
PF10724	100	DUF2516: Protein of unknown function (DUF2516); In	84.56
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	82.38
PF14967	327	FAM70: FAM70 protein	80.84

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=100.00  E-value=5.8e-41  Score=295.61  Aligned_cols=218  Identities=17%  Similarity=0.341  Sum_probs=177.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhhheeec-c--ccchh--hcchh--HHHHHHHHHHHHHHHHHHHhcCcchhHHHHH
Q 023538            3 RFSNTVIGFLNLFTLLASIPIIGAGLWMARS-S--TTCES--FLQTP--LLVIGFVVLIISLAGFIGACFNVAWALWVYL   75 (281)
Q Consensus         3 r~~k~~L~~~N~lf~l~G~~ll~~Giw~~~~-~--~~~~~--~~~~~--li~iG~v~~~vs~lGc~Ga~~es~~lL~~Y~   75 (281)
                      +++||++|++|+++|++|++++++|+|++.+ .  ++..+  ++..+  ++++|++++++|++||+||.|||+|+|.+|+
T Consensus         7 ~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y~   86 (237)
T KOG3882|consen    7 SCLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSYF   86 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHHH
Confidence            6899999999999999999999999999998 3  22111  22333  9999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhheecCCCcccc-c--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccc
Q 023538           76 VVMLFLIATLMALTIFGFVVTSRGGGVQV-P--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTP  152 (281)
Q Consensus        76 ~lL~vl~i~ei~~~i~~~~~~~~i~~~~~-~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~  152 (281)
                      +++++++++|++++++++++++++++.+. +  ++.++.|.+++       +  .+++||.+|+    +++|||++|  |
T Consensus        87 ~~l~l~~i~e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~-------~--~~~~~d~~Q~----~~~CCG~~~--~  151 (237)
T KOG3882|consen   87 ILLLLLFIAELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDP-------D--LGEAWDKLQR----ELKCCGVNG--Y  151 (237)
T ss_pred             HHHHHHHHHHHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCc-------c--HHHHHHHHHH----hccCCcCCC--c
Confidence            99999999999999999999999988876 3  44455554443       1  2368999999    999999999  9


Q ss_pred             cccccccccccCCCcCCCCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023538          153 LDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIG  232 (281)
Q Consensus       153 ~Dw~~~~~~~vP~SCC~~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~~~i~~~~i~v~~lqi~  232 (281)
                      +||.+.+...+|+|||++....           .+...  .+. ..++ +||.+++.+++++++..+++++++++++|++
T Consensus       152 ~~~~~~~~~~vP~SCC~~~~~~-----------~~~~~--~~~-~~~~-~GC~~~~~~~~~~~~~~i~~~~~~i~~~~~~  216 (237)
T KOG3882|consen  152 SDYFNCSSNNVPPSCCKRTRRQ-----------KFPQD--VPD-NIYT-EGCLEKLSSWLESNLLIIGGVGLGIAVLELL  216 (237)
T ss_pred             hHHhcCCCCCCCcccCCCcccc-----------ccccc--chh-hhhc-cccHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            9998765323999999861110           00000  011 1222 8888999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhccccCC
Q 023538          233 IYSIGCCAFQNTRRAQTD  250 (281)
Q Consensus       233 ~~~~a~~l~~~~~~~~~~  250 (281)
                      ++++|+++.+.+++++..
T Consensus       217 ~~~~a~~l~~~i~~~~~~  234 (237)
T KOG3882|consen  217 GMILACCLANAIRNQRDR  234 (237)
T ss_pred             HHHHHHHHHHHHHHhhhh
Confidence            999999999999877554

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.93  E-value=4.5e-28  Score=207.58  Aligned_cols=211  Identities=22%  Similarity=0.420  Sum_probs=43.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhheeec-c-cc-c-hh---hcchhHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHH
Q 023538            4 FSNTVIGFLNLFTLLASIPIIGAGLWMARS-S-TT-C-ES---FLQTPLLVIGFVVLIISLAGFIGACFNVAWALWVYLV   76 (281)
Q Consensus         4 ~~k~~L~~~N~lf~l~G~~ll~~Giw~~~~-~-~~-~-~~---~~~~~li~iG~v~~~vs~lGc~Ga~~es~~lL~~Y~~   76 (281)
                      |+|++++++|++++++|++++++|+|+... + .+ . ..   .....++++|+++++++++|++|+.++|++++.+|.+
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~   80 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYII   80 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Confidence            689999999999999999999999999432 2 11 1 11   1122277799999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhheecCCCcccccCc---cccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccc
Q 023538           77 VMLFLIATLMALTIFGFVVTSRGGGVQVPGR---VYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPL  153 (281)
Q Consensus        77 lL~vl~i~ei~~~i~~~~~~~~i~~~~~~~~---~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~  153 (281)
                      ++++++++|++++++++.+++++.+...+..   ..+.+..         +...++.||.+|+    +++|||.++  ++
T Consensus        81 ~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~iq~----~~~CCG~~~--~~  145 (221)
T PF00335_consen   81 LLILLFVLELVVGIVAFSYRDQLNSSLKDGLSLRCMKSYNS---------NESFSEAWDNIQE----KFECCGVNS--PD  145 (221)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHSSTT----------CHHHHHHHHHHH----HHT--SSTT--CH
T ss_pred             chhhHHHHHHHHHHhhhhccccccccccccccchhhhcccc---------ccchhhheecccc----cccccCCCC--Cc
Confidence            9999999999999999999987766543210   0111111         2224678999999    999999999  99


Q ss_pred             ccccccccccCCCcCCCCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023538          154 DYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGI  233 (281)
Q Consensus       154 Dw~~~~~~~vP~SCC~~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~~~i~~~~i~v~~lqi~~  233 (281)
                      ||...... .|.+... +..+.       ...+++.    +  .....+||.+++.++++++...+++++++++++|+++
T Consensus       146 d~~~~~~~-~~~~~~~-~~~~~-------~~~~~~~----~--~~~~~~gC~~~l~~~~~~~~~~~~~~~~~~~~l~~~~  210 (221)
T PF00335_consen  146 DWFTSKWS-SCSSPDS-CPDCQ-------CPDDCSS----E--NSIYTRGCYDKLREYLRSYLKYIGIVSLAILVLQLIG  210 (221)
T ss_dssp             HHHHHHHH-T----------TC-------S-TTCCC----C--HCCTST-HHHHHHHHHCT-------------------
T ss_pred             cccccccc-ccccccc-ccccc-------ccccccc----c--ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99764321 1111100 00000       0000110    1  1111289999999999999999999999999999999


Q ss_pred             HHHHHHHhhhh
Q 023538          234 YSIGCCAFQNT  244 (281)
Q Consensus       234 ~~~a~~l~~~~  244 (281)
                      +++|+++.|++
T Consensus       211 ~~~a~~l~~~~  221 (221)
T PF00335_consen  211 IILACCLCRHI  221 (221)
T ss_dssp             -----------
T ss_pred             HHHHHHHHhCC
Confidence            99999998864

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=99.54  E-value=1.3e-15  Score=117.45  Aligned_cols=95  Identities=18%  Similarity=0.389  Sum_probs=63.7

Q ss_pred             hhheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc------cccc
Q 023538           92 GFVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD------MTPI  163 (281)
Q Consensus        92 ~~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~------~~~v  163 (281)
                      ++++++++.+.+.+  .+++++|..++         ..+.+||.+|+    +|+|||+++  |+||.++.      ...|
T Consensus         1 ~~v~~~~v~~~~~~~~~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~v   65 (105)
T cd03163           1 GYVYRAKVEDELNPSIDKVFNKYNGTN---------AESRAVDYLQR----QLQCCGIHN--YTDWENTPWFKESKNNSV   65 (105)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHH----hCcccCCCC--HHHHhhchhhhcCCCCcc
Confidence            35777777766654  44566654322         24679999999    999999999  99997531      2469


Q ss_pred             CCCcCCCC-CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          164 QSGCCKPP-TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       164 P~SCC~~~-~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      |+|||..+ ..|+..             .......+.  +||.+++.+++++++
T Consensus        66 P~SCC~~~~~~C~~~-------------~~~~~~i~~--~GC~~~~~~~~~~~~  104 (105)
T cd03163          66 PLSCCKETFTSCTGS-------------LTQPKDLYQ--EGCEAKLVKKLQEVM  104 (105)
T ss_pred             CcCccCCCCCCcccC-------------CCCCCchhh--hccHHHHHHHHHHHh
Confidence            99999643 245321             000111222  799999999999886

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=99.50  E-value=3.7e-15  Score=117.20  Aligned_cols=107  Identities=10%  Similarity=0.200  Sum_probs=66.8

Q ss_pred             hhheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc------cccc
Q 023538           92 GFVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD------MTPI  163 (281)
Q Consensus        92 ~~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~------~~~v  163 (281)
                      +|++++++++.+.+  .+.+++|+.++      .+...+.+||.+|+    +|+|||+++  |+||.+..      ...|
T Consensus         1 ~~v~r~~v~~~i~~~l~~~i~~y~~~~------~~~~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~v   68 (117)
T cd03160           1 IYFQRDKLKQEMGDIVEKVIQNYGGNP------ENKTAEEAWDYVQF----QLQCCGWTG--PQDWTDNSLIKNSSEPLY   68 (117)
T ss_pred             CceeHHHHHHHHHHHHHHHHHhcCCCC------CCchHHHHHHHHHh----hCcccCCCC--chhHHhchhccCCCCCCC
Confidence            36778877776655  45566665421      01235778999999    999999999  99997431      1269


Q ss_pred             CCCcCCCCCC-CCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          164 QSGCCKPPTS-CNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       164 P~SCC~~~~~-C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      |+|||.+... ++..    .....|...... ....|. +||.+++.+++++++
T Consensus        69 P~SCC~~~~~~~~~~----~~~~~C~~~~~~-~~~iy~-~GC~~~l~~~~~~n~  116 (117)
T cd03160          69 PCSCCNSSATADSPR----PSKGFCEAPASL-DWPVYQ-EGCMEKLQSWLNENL  116 (117)
T ss_pred             CHhhhcCCccccccC----CCCcccCCCCcc-ccchHH-HhhHHHHHHHHHHhc
Confidence            9999964321 1110    012235322100 111232 799999999999886

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=99.50  E-value=5.6e-15  Score=113.47  Aligned_cols=99  Identities=19%  Similarity=0.326  Sum_probs=64.1

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc---ccccCCCc
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD---MTPIQSGC  167 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~---~~~vP~SC  167 (281)
                      |++|+++.+.+.+  .+++++|..++         ..+.+||.+|+    +|+|||+++  |+||.+..   ...||.||
T Consensus         1 ~v~r~~i~~~l~~~l~~~i~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~vP~SC   65 (104)
T cd03161           1 FVFRHEIKGTFLRTYNEAVSNYNGDD---------ERSDAVDTVQR----TLHCCGVEN--YTDWLNSPYFLEKGIPLSC   65 (104)
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcCCh---------hHHHHHHHHHh----cCcCcCCCC--hhhhhccccccCCCcCccc
Confidence            3567777666554  45566665432         24668999999    999999999  99997642   13699999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          168 CKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       168 C~~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      |.....|+...   ....     ..... ..|. +||.+++.+++++++
T Consensus        66 C~~~~~C~~~~---~~~~-----~~~~~-~i~~-~GC~~~~~~~~~~n~  104 (104)
T cd03161          66 CKNRSDCSPQD---LKNL-----TKAAT-KVYQ-QGCFTLVTSFMEANM  104 (104)
T ss_pred             ccCCCCCCccc---cccc-----ccccc-ccch-hccHHHHHHHHHHhC
Confidence            97544564321   0000     00011 1232 799999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=99.48  E-value=8.6e-15  Score=108.86  Aligned_cols=84  Identities=15%  Similarity=0.320  Sum_probs=61.1

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccccccCCCcCCC
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKP  170 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~SCC~~  170 (281)
                      |++++++.+.+.+  ++++++|..++         ..+.+||.+|+    +|+|||++|  |+||.    ..+|+|||..
T Consensus         1 ~v~~~~v~~~i~~~~~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~--~~Dw~----~~vP~SCC~~   61 (86)
T cd03164           1 FVYEKKLNNYVKEGLTDSLEQYHKDN---------NTSEAWDMIQS----NLQCCGING--TTDWG----SGVPSSCCSS   61 (86)
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcCCc---------cHHHHHHHHHH----HhcCCCCCC--hhhhC----CCCChhhcCC
Confidence            3566666665544  45666665322         13678999999    999999999  99995    3699999952


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHHHHHH
Q 023538          171 PTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLS  220 (281)
Q Consensus       171 ~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~~~i~  220 (281)
                      .  |             .        ...  +||.+++.+++++++.+++
T Consensus        62 ~--~-------------~--------~~~--~GC~~~~~~~~~~~~~iig   86 (86)
T cd03164          62 D--T-------------E--------YKV--EGCYKKLKNWFESNFLYTG   86 (86)
T ss_pred             C--C-------------c--------ccc--ccHHHHHHHHHHHHHHHhC
Confidence            1  1             0        112  7888999999999998764

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=99.47  E-value=5.2e-15  Score=113.07  Aligned_cols=97  Identities=10%  Similarity=0.096  Sum_probs=65.9

Q ss_pred             HHHhhheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccccccCCC
Q 023538           89 TIFGFVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSG  166 (281)
Q Consensus        89 ~i~~~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~S  166 (281)
                      ||++|++++++.+.+.+  .+++++|+.++        .+.+.+||.+|+    +|+|||+++  +.||..   ..||+|
T Consensus         1 gi~~~v~r~~i~~~i~~~~~~~i~~y~~~~--------~~~~~~~d~lQ~----~l~CCG~~~--~~d~~~---~~vP~S   63 (100)
T cd03154           1 GIVGAVYKPKIENELKEKNTKLLSLLGQNA--------KSVKKSLEKFQK----ELKCCGLVN--GADDWG---NDIPAS   63 (100)
T ss_pred             CEEEEEeHHHHHHHHHHHHHHHHHHcCCCh--------HHHHHHHHHHHH----cCCCCCCCC--chhhcc---CCCCCC
Confidence            47789999998877765  55676664321        124678999999    999999999  888864   369999


Q ss_pred             cCC-CCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          167 CCK-PPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       167 CC~-~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      ||+ .+..|...          ....  ......  +||.+++.+++++++
T Consensus        64 Ccc~~~~~c~~~----------~~~~--~~~~~~--~GC~~~i~~~~~~~~  100 (100)
T cd03154          64 CNCTTTQSDCVV----------AYYG--GSNVYK--EPCISKIKDFLKKNL  100 (100)
T ss_pred             CcCCCCCCCccc----------ccCC--CcCccc--cccHHHHHHHHHhhC
Confidence            964 33333210          0000  011223  788899999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=99.47  E-value=4.1e-15  Score=113.09  Aligned_cols=93  Identities=14%  Similarity=0.212  Sum_probs=61.8

Q ss_pred             heecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc-ccccCCCcCCC
Q 023538           94 VVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD-MTPIQSGCCKP  170 (281)
Q Consensus        94 ~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~-~~~vP~SCC~~  170 (281)
                      ++++++.+.+.+  .+++++|..++       +...+.+||.+|+    +|+|||+++  |+||.+.. ...||+|||..
T Consensus         2 v~r~~~~~~i~~~l~~~~~~y~~~~-------~~~~~~~~d~~Q~----~l~CCG~~~--~~Dw~~~~~~~~vP~SCC~~   68 (98)
T cd03165           2 VFREKVDLTAKDDLKEGLELYGTRN-------NRGLTNAWDITQT----EFRCCGVTN--YTDWYEVLGENRVPDSCCQE   68 (98)
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCC-------cHHHHHHHHHHHH----hCcCcCCCC--hhHHHHhcCCCCCCHhhcCC
Confidence            456666655544  45666665432       1225678999999    999999999  99997531 24699999964


Q ss_pred             C-CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          171 P-TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       171 ~-~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      . ..|+.             ..  +...+.  +||.+++.+++++++
T Consensus        69 ~~~~C~~-------------~~--~~~~~~--~GC~~~~~~~~~~~~   98 (98)
T cd03165          69 DSQDCGR-------------NP--TELWWK--TGCYEKVQQWLVDNL   98 (98)
T ss_pred             Ccccccc-------------CC--ccchHH--hhhHHHHHHHHHhcC
Confidence            2 23431             11  011223  899999999999863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=99.46  E-value=8e-15  Score=111.81  Aligned_cols=93  Identities=10%  Similarity=0.208  Sum_probs=62.0

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc---ccccCCCc
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD---MTPIQSGC  167 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~---~~~vP~SC  167 (281)
                      |++++++.+.+.+  .++++.|..+.         ..+.+||.+|+    +|+|||+++  |+||....   ...||+||
T Consensus         1 ~v~r~~v~~~i~~~l~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~vP~SC   65 (99)
T cd03166           1 YVFRDKVMSEFNDSFNQMISNYNKTN---------DFRKILDRMQK----DLKCCGANN--YTDWENIPSLDTDSVPDSC   65 (99)
T ss_pred             CCchHHHHHHHHHHHHHHHHHcCCCH---------HHHHHHHHHHH----HhcccCCCC--hhhhhcccCCCCCCCCcCc
Confidence            3567776666654  45566664321         24678999999    999999999  99997531   24699999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          168 CKPP-TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       168 C~~~-~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      |... ..|+..             . ... ..|. +||.+++.+++++++
T Consensus        66 C~~~~~~C~~~-------------~-~~~-~~y~-~GC~~~~~~~~~~~~   99 (99)
T cd03166          66 CINVTKGCGIN-------------F-DEK-VIHL-EGCVTKIEGWLKKNI   99 (99)
T ss_pred             cCcCCCCcccC-------------C-Ccc-chHH-hcCHHHHHHHHHHhC
Confidence            9642 334311             0 011 1232 788999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=99.46  E-value=1.2e-14  Score=112.89  Aligned_cols=99  Identities=12%  Similarity=0.107  Sum_probs=61.3

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc--------ccc
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD--------MTP  162 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~--------~~~  162 (281)
                      |++++++.+.+.+  ++++++|+..+.      +...+.+||.+|+    +|+|||+++  |.||.++.        ...
T Consensus         1 ~v~~~~~~~~i~~~l~~~i~~~y~~~~------~~~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~~~   68 (110)
T cd03155           1 YTYYQQLEDELKESLKRTMQENYGQSG------EEALTLTVDELQQ----EFKCCGSNN--YTDWQDSEWINSNEANGRL   68 (110)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHH----hCcCcCCCC--hhhhhhccccccCCCCCCC
Confidence            3566666666544  455665322210      1235678999999    999999999  99997642        136


Q ss_pred             cCCCcCCCC-CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          163 IQSGCCKPP-TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       163 vP~SCC~~~-~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      ||.|||... ..|+..           ..  .+.......+||.+++.+++++++
T Consensus        69 vP~SCC~~~~~~c~~~-----------~~--~~~~~~~~~~GC~~~~~~~~~~~~  110 (110)
T cd03155          69 VPDSCCKTVVDRCGCL-----------RD--HPSNIYKVEGGCIPKLEDFLYDHL  110 (110)
T ss_pred             CCccccCCCCCCcccc-----------cC--ChhccccccCChHHHHHHHHHHhC
Confidence            999999743 234210           00  001111111588899999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=99.45  E-value=1.1e-14  Score=115.33  Aligned_cols=100  Identities=14%  Similarity=0.179  Sum_probs=62.8

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc-----------
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD-----------  159 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~-----------  159 (281)
                      |++++++.+.+.+  .+++++|..++         ..+.+||.+|+    +|+|||++|  |+||..+.           
T Consensus         1 ~v~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~D~iQ~----~l~CCG~~~--~~DW~~~~~~~~~~~~~~~   65 (121)
T cd03159           1 FVFKDWIKDQLTEFLNNNIRAYRDDI---------DLQNLIDFLQE----YWQCCGARG--PDDWNLNIYFNCTDSNPSR   65 (121)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhccCH---------HHHHHHHHHHH----hccCCCCCC--hHHhcccccccccCCCCCC
Confidence            4567777766655  55677765322         24679999999    999999999  99997421           


Q ss_pred             -ccccCCCcCCCC-------CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          160 -MTPIQSGCCKPP-------TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       160 -~~~vP~SCC~~~-------~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                       ...||.|||...       ..|+...   ...+    ...... ..|+ +||.+++.+++++++
T Consensus        66 ~~~~vP~SCC~~~~~~~~~~~~C~~~~---~~~~----~~~~~~-~i~~-~GC~~~l~~~~~~n~  121 (121)
T cd03159          66 ERCGVPFSCCVKDPAEDVVNTQCGYDV---RKKP----ELELQH-HIHT-KGCVQAFEKWLQDNL  121 (121)
T ss_pred             CCCCCCcccccCCcccccccCccCccc---cccc----cccccC-CchH-hhCHHHHHHHHHhcC
Confidence             124999999632       2353210   0000    000011 1232 799999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=99.43  E-value=2.7e-14  Score=112.76  Aligned_cols=100  Identities=13%  Similarity=0.204  Sum_probs=62.5

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc----------c
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD----------M  160 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~----------~  160 (281)
                      |++++++.+.+.+  .++++.|+.+.         ..+.+||.+|.    +|+|||+++  |.||.+..          .
T Consensus         1 ~v~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~d~lQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~~~   65 (119)
T cd03158           1 FIFSNQTIDLLEENIRKAIVHYYDDL---------DLQNIIDFVQK----EFKCCGGDD--YRDWSKNMYFNCSSPNPEA   65 (119)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHccCH---------HHHHHHHHHHH----HccCCCCCC--hhhcccccccccCCCCCcC
Confidence            3567776666654  45666664321         25778999999    999999999  99997421          1


Q ss_pred             cccCCCcCCCCC-------CCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          161 TPIQSGCCKPPT-------SCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       161 ~~vP~SCC~~~~-------~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      ..||.|||....       .|+...       ...... ......|. +||.+++.+++++|+
T Consensus        66 ~~vP~SCC~~~~~~~~~~~~C~~~~-------~~~~~~-~~~~~i~~-~GC~~~i~~~~~~n~  119 (119)
T cd03158          66 CGVPYSCCIRAKDQEVINTMCGYGV-------QNLERL-EASKLIYT-RGCIDAVVLWIEDNL  119 (119)
T ss_pred             CCcCcCcccCCCCccccccCcCCCc-------ccccch-hhcCcccc-cchHHHHHHHHHhhC
Confidence            259999997432       243210       000000 00112232 799999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=99.43  E-value=1.7e-14  Score=112.39  Aligned_cols=101  Identities=14%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             hhheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccc---------cc
Q 023538           92 GFVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLER---------DM  160 (281)
Q Consensus        92 ~~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~---------~~  160 (281)
                      ++++++++++.+.+  .+.+++|..++        ...+.+||.+|+    +|+|||++|  |+||.++         ..
T Consensus         2 ~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~~   67 (114)
T cd03156           2 ALFFKKDLEDSFKNLLKNNYGNYNSTG--------DAITSTWNRVMI----ELKCCGVNG--PTDFVDSTSFFRQKNEPN   67 (114)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhccccc--------hHHHHHHHHHHh----cccCcCCCC--cHHHHhhhHHhccCCCCC
Confidence            56777777666654  44555554321        125779999999    999999999  9999764         12


Q ss_pred             cccCCCcCCCCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHH
Q 023538          161 TPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRD  215 (281)
Q Consensus       161 ~~vP~SCC~~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~  215 (281)
                      ..||.|||..... ...     .+ .|....... ...++ +||.+++.++++++
T Consensus        68 ~~vP~SCC~~~~~-~~~-----~~-~~~~~~~~~-~~~~~-~GC~~~l~~~~~~~  113 (114)
T cd03156          68 SPYPESCCKRNSN-SQI-----VD-LDCPKLGSP-NSYNK-KGCYEKLSNPIERY  113 (114)
T ss_pred             CcCCHHHcCcccc-ccc-----cc-ccCCCCCcc-hhhhh-cCchHHHHHHHHhc
Confidence            4799999974321 100     01 111000001 11222 78999999999886

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=99.39  E-value=6.1e-14  Score=110.96  Aligned_cols=99  Identities=10%  Similarity=0.139  Sum_probs=60.4

Q ss_pred             heecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccc----------c
Q 023538           94 VVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDM----------T  161 (281)
Q Consensus        94 ~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~----------~  161 (281)
                      ++|+++++.+.+  .+++++|..++         ..+.+||.+|+    +|+|||+++  |+||.....          .
T Consensus         2 ~~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~~~~~~~~~~~~~~~   66 (120)
T cd03167           2 ALWGPLQDGLEHTLRLAIAHYQDDP---------DLRFLIDQVQL----GLQCCGASS--YQDWQQNLYFNCSSPGVQAC   66 (120)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcCCh---------hHHHHHHHHHH----hccCCCCCC--hHHhcccccccCCCCCCCCC
Confidence            355666655544  45566664321         23568999999    999999999  999974311          2


Q ss_pred             ccCCCcCCCC--------CCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          162 PIQSGCCKPP--------TSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       162 ~vP~SCC~~~--------~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      .||+|||..+        ..|+...   ....     ........|. +||.+++.+++++++
T Consensus        67 ~vP~SCC~~~~~~~~~~~~~C~~~~---~~~~-----~~~~~~~iy~-~GC~~~l~~~~~~n~  120 (120)
T cd03167          67 SLPASCCIDPREDGAVVNDQCGFGA---LGLD-----EDAAQRVVHL-GGCGPPLRRWLRGNL  120 (120)
T ss_pred             CCCcCccCCCccccccccCCCCCCc---cccc-----cchhcccchh-ccCHHHHHHHHHhcC
Confidence            5999999643        2354211   0000     0000011232 799999999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=99.37  E-value=8.9e-14  Score=112.73  Aligned_cols=109  Identities=16%  Similarity=0.248  Sum_probs=65.1

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccc-----c------
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLER-----D------  159 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~-----~------  159 (281)
                      |++++++.+.+.+  +++++.|..+++..    +...+.+||.+|+    +|+|||++|  |+||.+.     .      
T Consensus         1 fv~rd~l~~~L~~~L~~~i~~Y~~~~~~~----~~~~~~~~D~lQ~----~fkCCG~~~--y~DW~~~~w~~n~y~~~~~   70 (143)
T cd03162           1 FIMRGSLEESLKTGLKNAMKFYKDTDTPG----RCFLKKTIDMLQI----EFQCCGNNG--YRDWFEIQWISNRYLDFSS   70 (143)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhcCCcccc----hhhHHHHHHHHHH----hccCCCCCC--hhhhhhhhhhcccccCCCc
Confidence            3556666665554  55677776543210    1124678999999    999999999  9999641     1      


Q ss_pred             ----------------ccccCCCcCCCC--CCCCCCCCCCCCCCCcc-ccCC-CCCceeeeCcchHHHHHHHHHHH
Q 023538          160 ----------------MTPIQSGCCKPP--TSCNYNMPTMAQDPDCY-RWNN-APTLLCYECDSCKAGVLEDVRRD  215 (281)
Q Consensus       160 ----------------~~~vP~SCC~~~--~~C~~~~~~~~~~~~C~-~~~~-~~~~gc~~~~GC~~~l~~~l~~~  215 (281)
                                      ...||.|||.+.  ..|....  . .+..+. .+.. ......++ +||.+++.+|+.+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~~vP~SCc~~~~~~~C~~~~--~-~~~~a~~~~~~~~~~~~i~~-~GC~~~l~~~~~~~  142 (143)
T cd03162          71 KEVKDRIKSNVDGRYLTDGVPFSCCNPSSPRPCIQHQ--I-TDNSAHYNYDYQTEELNLWT-RGCREALLEYYTSK  142 (143)
T ss_pred             cchhhhhhcccccccccCCcCCcccCCCCCCchhhhc--c-cccccccccccCcccccchH-HHHHHHHHHHHHhc
Confidence                            136999999753  3454321  0 111110 0000 11112232 89999999999864

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=99.34  E-value=7.2e-13  Score=102.00  Aligned_cols=83  Identities=18%  Similarity=0.359  Sum_probs=54.2

Q ss_pred             CccccccccCCCchhhhccCCCccchHHHHhccccCccccCccccccccccccc-ccccCCCcCCCC-CCCCCCCCCCCC
Q 023538          106 GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERD-MTPIQSGCCKPP-TSCNYNMPTMAQ  183 (281)
Q Consensus       106 ~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~-~~~vP~SCC~~~-~~C~~~~~~~~~  183 (281)
                      .++|.+|+.++       ....+.+||.+|+    +|+|||+++  |+||.+.. ...||.|||... ..|+...    .
T Consensus        17 ~~~~~~Y~~~~-------~~~~~~~~D~iQ~----~l~CCG~~~--~~DW~~~~~~~~vP~SCC~~~~~~C~~~~----~   79 (103)
T cd03157          17 KSRMSNFGLQR-------YQWLTHAWNSFQT----EFKCCGVIY--FTDWLEMTEMEWPPDSCCSNQYPGCARQA----H   79 (103)
T ss_pred             HHHHHHHCCCC-------chhHHHHHHHHHH----hccCccCCC--hhHHhccCCCCCCCccccCCCCCCcCcCC----C
Confidence            34566776532       1124678999999    999999999  99997542 135999999743 3454210    0


Q ss_pred             CCCccccCCCCCceeeeCcchHHHHHHHHHH
Q 023538          184 DPDCYRWNNAPTLLCYECDSCKAGVLEDVRR  214 (281)
Q Consensus       184 ~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~  214 (281)
                             ..... ..|+ +||.+++.++++.
T Consensus        80 -------~~~~~-~iy~-~GC~~~i~~~l~~  101 (103)
T cd03157          80 -------YNDLS-DLYQ-EGCGPKIYSFIRG  101 (103)
T ss_pred             -------Ccccc-cccc-cchHHHHHHHHHh
Confidence                   00001 1233 7999999999975

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=99.28  E-value=5.8e-13  Score=98.95  Aligned_cols=62  Identities=24%  Similarity=0.475  Sum_probs=46.2

Q ss_pred             CccchHHHHhccccCccccCcccccccccccccccccCCCcCCCCCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHH
Q 023538          127 DPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKA  206 (281)
Q Consensus       127 ~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~SCC~~~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~  206 (281)
                      .+.+||.+|.    +|+|||++|  |.||.... ..||+|||.... +           .|.  .+    ...  +||.+
T Consensus        28 ~~~~~d~iq~----~l~CCG~~~--~~D~~~~~-~~vP~SCc~~~~-~-----------~~~--~~----~~~--~GC~~   80 (90)
T cd03127          28 FQEAMDALQS----TFECCGVNG--PTDYLDLR-LLVPSSCCKGTD-G-----------NCG--LN----LYT--EGCLE   80 (90)
T ss_pred             HHHHHHHHHH----hCcCcCCCC--hHHHccCC-CCCCHhhcCCCC-C-----------CCc--cc----hhh--HccHH
Confidence            4679999999    999999999  99997633 579999996421 1           111  00    122  78889


Q ss_pred             HHHHHHHHH
Q 023538          207 GVLEDVRRD  215 (281)
Q Consensus       207 ~l~~~l~~~  215 (281)
                      ++.++++++
T Consensus        81 ~~~~~~~~~   89 (90)
T cd03127          81 KLVDFLRSN   89 (90)
T ss_pred             HHHHHHHhh
Confidence            999999876

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=99.21  E-value=1.2e-12  Score=96.90  Aligned_cols=82  Identities=15%  Similarity=0.139  Sum_probs=54.9

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccccccCCCcCCC
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKP  170 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~SCC~~  170 (281)
                      |++++++.+.+.+  .+.+++|..++       +...+.+||.+|+    +|+|||++|  +.||      .||+||++.
T Consensus         1 ~v~r~~v~~~i~~~~~~~~~~y~~~~-------~~~~~~~~d~iQ~----~l~CCG~~~--~~D~------~vP~SC~~~   61 (84)
T cd03152           1 FSNKDKVVKEVQTFYRQTYAKYKQSR-------DPPLKETLKAIHF----ALDCCGPTG--GLEQ------FVTDTCPKK   61 (84)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhccC-------CHHHHHHHHHHHH----HHcCCCCCC--Cccc------ccCCCCCCC
Confidence            3567777666544  45566665431       1123458999999    999999999  9999      399998421


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHHH
Q 023538          171 PTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDW  216 (281)
Q Consensus       171 ~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~~  216 (281)
                      +.           .      .+    ...  +||.+++.+++++++
T Consensus        62 ~~-----------~------~~----~~~--~gC~~~i~~~~~~~~   84 (84)
T cd03152          62 EG-----------L------EN----LIT--KSCPDAIDDVFNSKL   84 (84)
T ss_pred             Cc-----------h------hh----hcc--CCCcHHHHHHHHccC
Confidence            10           0      00    122  788899999998863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

>cd03151 CD81_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily

Probab=98.70  E-value=1.5e-09  Score=80.33  Aligned_cols=81  Identities=16%  Similarity=0.134  Sum_probs=54.1

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccccccCCCcCCC
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKP  170 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~SCC~~  170 (281)
                      +++++++.+.+.+  ++.+++|..+.       +...+.+||.+|+    +|+|||.+|  +.|+..   ..+|++|...
T Consensus         1 ~v~r~~v~~~i~~~l~~~~~~y~~~~-------~~~~~~~~d~iQ~----~l~CCG~~~--~~d~~~---~~~~~~C~~~   64 (84)
T cd03151           1 FINKDQIIKEVQNFYDSAYQDAVTDT-------RSKGTAVLKTFHS----TLDCCGKGN--LTALLS---LLSTDLCPKK   64 (84)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHccCc-------chhHHHHHHHHHH----hcCCCCCCC--CcchHH---HHHhCCCCCc
Confidence            3556666665544  45566664421       1124568999999    999999999  999864   3577777311


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHH
Q 023538          171 PTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRD  215 (281)
Q Consensus       171 ~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~  215 (281)
                        .                      ...+  ++|.+++.++++.+
T Consensus        65 --~----------------------~~~~--~~C~~~i~~~~~~~   83 (84)
T cd03151          65 --L----------------------LLDT--KDCHQEIDDLFSEK   83 (84)
T ss_pred             --c----------------------ccCC--CCccHHHHHHHhcc
Confidence              0                      0123  78889999999875

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).

>PF05640 NKAIN: Na,K-Atpase Interacting protein; InterPro: IPR008516 NKAIN (Na,K-Atpase INteracting) proteins are a family of evolutionary conserved transmembrane proteins that localise to neurons, that are critical for neuronal function, and that interact with the beta subunits, beta1 in vertebrates and beta in Drosophila, of Na,K-ATPase

Probab=86.80  E-value=9.5  Score=32.61  Aligned_cols=44  Identities=18%  Similarity=0.272  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHH
Q 023538           45 LLVIGFVVLIISLAGFIGACFNVAWALWVYLVVMLFLIATLMAL   88 (281)
Q Consensus        45 li~iG~v~~~vs~lGc~Ga~~es~~lL~~Y~~lL~vl~i~ei~~   88 (281)
                      -|..-.+-+++-++|.+||..-++..+.+|++-..+-+.--+..
T Consensus        36 PIl~NF~hIi~vIlGlFG~~QyR~ryi~~Y~vW~~~Wv~wNvfi   79 (200)
T PF05640_consen   36 PILANFLHIIFVILGLFGAIQYRPRYIIVYAVWTALWVTWNVFI   79 (200)
T ss_pred             HHHHHHHHHHHHHHHHhhheeecchHHHHHHHHHHHHHHHhHHH
Confidence            45555566666689999999999999999998887766665443

NKAINs have highly conserved trans-membrane domains but otherwise no other characterised domains. NKAINs may function as subunits of pore or channel structures in neurons or they may affect the function of other membrane proteins. They are likely to function within the membrane bilayer [].

>PF10724 DUF2516: Protein of unknown function (DUF2516); InterPro: IPR019662 This entry represents a conserved protein in Actinobacteria

Probab=84.56  E-value=7  Score=29.76  Aligned_cols=27  Identities=11%  Similarity=0.172  Sum_probs=23.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhheeec
Q 023538            7 TVIGFLNLFTLLASIPIIGAGLWMARS   33 (281)
Q Consensus         7 ~~L~~~N~lf~l~G~~ll~~Giw~~~~   33 (281)
                      .+.-+.+.+++++.++.+++++|.+++
T Consensus         3 ~l~~~~~~i~~~l~~~~~~~~v~Alv~   29 (100)
T PF10724_consen    3 FLFQIQGWILLALSLVALVLAVWALVD   29 (100)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677888899999999999999988

The function is not known.

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=82.38  E-value=2  Score=36.26  Aligned_cols=11  Identities=9%  Similarity=0.380  Sum_probs=4.8

Q ss_pred             HHHHHHhhhee
Q 023538           86 MALTIFGFVVT   96 (281)
Q Consensus        86 i~~~i~~~~~~   96 (281)
                      +++|+..+..+
T Consensus        53 ~~~g~~~~~~~   63 (191)
T PF04156_consen   53 LSLGLLCLLSK   63 (191)
T ss_pred             HHHHHHHHHHc
Confidence            44444444443

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PF14967 FAM70: FAM70 protein

Probab=80.84  E-value=2  Score=38.85  Aligned_cols=76  Identities=20%  Similarity=0.202  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHhhhheeeccccchhhcchhHHHHHHHHHHHHHHHHHHHhc-Ccc-hhHHHHHHHHHHH----HHHHHH
Q 023538           14 LFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGFIGACF-NVA-WALWVYLVVMLFL----IATLMA   87 (281)
Q Consensus        14 ~lf~l~G~~ll~~Giw~~~~~~~~~~~~~~~li~iG~v~~~vs~lGc~Ga~~-es~-~lL~~Y~~lL~vl----~i~ei~   87 (281)
                      ..++++++.++.+|+..-.. |+  ++. ..-.--|+++-+-||+|.+|+.. ||| -||..-++++.+-    |..-|+
T Consensus        32 ~~lL~vS~~iltvGLaatTR-Te--NVt-VgGYyPGIILgFGSFLGIiGi~LvENrRqmLvAaIVFiSfGvVaAFcCaIV  107 (327)
T PF14967_consen   32 VSLLVVSLLILTVGLAATTR-TE--NVT-VGGYYPGIILGFGSFLGIIGIHLVENRRQMLVAAIVFISFGVVAAFCCAIV  107 (327)
T ss_pred             HHHHHHHHHHHHhhhheeee-ec--ceE-ecccccceEEeehhHHHHhhhhhhhcCceEEEEEEEEEecchHHHHHHHHH
Confidence            34456667777777765432 21  110 00111233334457888888874 665 4444443333333    333344


Q ss_pred             HHHHhh
Q 023538           88 LTIFGF   93 (281)
Q Consensus        88 ~~i~~~   93 (281)
                      =|+++.
T Consensus       108 DGVfaa  113 (327)
T PF14967_consen  108 DGVFAA  113 (327)
T ss_pred             HHHhhh
Confidence            455443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	281
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	99.31

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=99.31  E-value=3.2e-14  Score=105.40  Aligned_cols=87  Identities=8%  Similarity=0.145  Sum_probs=56.2

Q ss_pred             hheecCCCccccc--CccccccccCCCchhhhccCCCccchHHHHhccccCccccCcccccccccccccccccCCCcCCC
Q 023538           93 FVVTSRGGGVQVP--GRVYKEYHLQDYSPWLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKP  170 (281)
Q Consensus        93 ~~~~~~i~~~~~~--~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~g~~~~Dw~~~~~~~vP~SCC~~  170 (281)
                      |++++++.+.+.+  .+++++|..+.      ++.+.+.+||.+|+    +|+|||++|  |+||.+   ..||+|||..
T Consensus         1 fv~~~~v~~~l~~~l~~~~~~y~~~~------~~~~~~~~~d~iQ~----~l~CCG~~~--~~Dw~~---~~vP~ScC~~   65 (90)
T 1g8q_A            1 FVNKDQIAKDVKQFYDQALQQAVVDD------DANNAKAVVKTFHE----TLDCCGSST--LTALTT---SVLKNNLCPS   65 (90)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCT------TCHHHHHHHHHHHH----HHTCCSCTT--CGGGHH---HHHHTTCSCT
T ss_pred             CccHHHHHHHHHHHHHHHHHHhccCC------CchhHHHHHHHHHH----hhcCCCCCC--hhhhcc---CCCCCCCCCC
Confidence            3556666555543  45566653211      01113679999999    999999999  999964   3589999953


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCceeeeCcchHHHHHHHHHHH
Q 023538          171 PTSCNYNMPTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRD  215 (281)
Q Consensus       171 ~~~C~~~~~~~~~~~~C~~~~~~~~~gc~~~~GC~~~l~~~l~~~  215 (281)
                      ...             |.  .     ..|. +||.+++.++++++
T Consensus        66 ~~~-------------~~--~-----~~~~-~GC~~~i~~~~~~n   89 (90)
T 1g8q_A           66 GSN-------------II--S-----NLFK-EDCHQKIDDLFSGK   89 (90)
T ss_dssp             TCC-------------HH--H-----HHTS-CCHHHHHHHHHHTC
T ss_pred             CCC-------------Cc--c-----cCcc-CCcHHHHHHHHHhC
Confidence            211             11  0     1121 78889999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	281
d1g8qa_	90	CD81 extracellular domain {Human (Homo sapiens) [T	95.18

>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Tetraspanin
superfamily: Tetraspanin
family: Tetraspanin
domain: CD81 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.00015  Score=51.36  Aligned_cols=19  Identities=11%  Similarity=0.087  Sum_probs=15.6

Q ss_pred             chHHHHhccccCccccCcccccccc
Q 023538          130 YWSTIRSCLLGSKTCAKLALWTPLD  154 (281)
Q Consensus       130 ~~d~iQ~~~~~~~~CCG~~g~~~~D  154 (281)
                      .+..+|.    .|+|||..|  +.+
T Consensus        34 tLk~fH~----~L~CCG~~~--~~~   52 (90)
T d1g8qa_          34 VVKTFHE----TLDCCGSST--LTA   52 (90)
T ss_dssp             HHHHHHH----HHTCCSCTT--CGG
T ss_pred             HHHHHHH----HHccCCCCC--ccc
Confidence            5777888    999999998  644