Citrus Sinensis ID: 023577

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MENPIPQKKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccccHHHHHccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHcccHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHccccccccccccccHHHHccccccHHHcccccccHHHHccccccHHHHHHHHHHHHHHcccccccccHHccccccHHHHHHHcHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHcHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHccc
Coil and Loop (DISEMBL)
menpipqkkekkknFRKRSYEEEeettnklsdDEEERRLALEEIKFLQKQRerksgipaipSALQSAAAaggggltkvseknegdgekdelVLQDTFAQETAVMVEDPNMLKYVEQELAKkrgknidvndrVENDLKHAEDELYKIpehlkkrnseesstqWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLmgraksdfsipssysadyfQRGRDYAEKLRREHpelykdrgsqddgagsrptdnstdaagsrqAATDQFMLERFRKRERHRVMRR
Flexible Loop (DISEMBL)
menpipqkkekkknfrkrsyeeeeettnklsddeeeRRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETavmvedpnMLKYVEQELakkrgknidvndrveNDLKHAEDElykipehlkkrnseesstqwttgiaevqlPIEYKLKNIEETEAAKKLLQEKRLmgraksdfsipssysadyfQRGRDYAEKLRREHPElykdrgsqddgagsrptdnstdaagsrqaatdqfmlerfrkrerhrvmrr
Low Complexity Region (SEG)
MENPIPQkkekkkNFRKRSYEEEEETTNKLSddeeerrlaleeIKFLQKQRERKSGIPAIPSALQSaaaaggggLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Disordered region (IsUnstruct)
************************************************************************************************FA*ETAVMVE***MLKYV***********************************************WTTGIAEVQLPIEYKLKNI****************************************************************************************************
Disordered Region (DISOPRED)
************************************************************************************************F*******V**PNML********************************************************EVQLPIEYKLKNIEETEA***************************YF*************************************************FMLERFRKRERH*****
Disordered Region (DISEMBL)
************************************RRLALEEIKFLQKQRERKSGIPAIPSALQ***********************DELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLK***********TTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYK*************************AATDQFMLERFRKR********
Disordered Region (DISPRO)
**********************************EERRLALEEIKFLQKQRERKSGIPAIPSALQSAA*************************QDTFAQETAVMVEDPNMLKYVEQELAKKR************DLKHAEDELYKIPEHLKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREH********************************TDQFMLERFRKRERH*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENPIPQKKEKKKNFRKRSYEEEEETTNKxxxxxxxxxxxxxxxxxxxxxRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKKRNSEESSTQWTTGIAEVQLPxxxxxxxxxxxxxxxxxxxxxRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q9NZ63	289	Uncharacterized protein C	yes	no	0.832	0.806	0.306	4e-16
Q3TQI7	289	Uncharacterized protein C	yes	no	0.832	0.806	0.310	8e-16
Q5RC87	289	Uncharacterized protein C	yes	no	0.832	0.806	0.303	3e-15

>sp|Q9NZ63|CI078_HUMAN Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 31/264 (11%)

Query: 38  RLALEEIKFLQKQRERKSGIPAIP-----------SALQSAAAAGGGGLT---KVSEKNE 83
           RL LEE + +Q  R+R +G+ A+            + +        GG+    K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAVALLVGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +   K+AED 
Sbjct: 88  DKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQKVKPKNAEDC 145

Query: 143 LYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 197
           LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 198 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 250
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 251 TDAAGSRQAATDQFMLERFRKRER 274
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287

Homo sapiens (taxid: 9606)

>sp|Q3TQI7|CI078_MOUSE Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2

 Score = 84.3 bits (207), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 31/264 (11%)

Query: 38  RLALEEIKFLQKQRERKSGIPA----IPSALQ----------SAAAAGGGGLTKVSEKNE 83
           RL LEE + +Q  R+R +G+ A    +   +Q            A  G   + K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAAALLVGEKVQEETTLVDDPFQMATGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I   +  +   K+AED 
Sbjct: 88  DKVSEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEQEEQKAKPKNAEDC 145

Query: 143 LYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 197
           LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 198 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 250
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 251 TDAAGSRQAATDQFMLERFRKRER 274
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287

Mus musculus (taxid: 10090)

>sp|Q5RC87|CI078_PONAB Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 31/264 (11%)

Query: 38  RLALEEIKFLQKQRERKSGIPAIP-----------SALQSAAAAGGGGLT---KVSEKNE 83
           RL LEE + +Q  R+R +G+ A+            + +        GG+    K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAVALLVGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +   K+AED 
Sbjct: 88  DKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQKVKPKNAEDC 145

Query: 143 LYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 197
           LY++PE+++    K+  E  S Q  +GI EV   I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDQGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 198 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 250
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 251 TDAAGSRQAATDQFMLERFRKRER 274
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.127    0.341 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,761,837
Number of Sequences: 539616
Number of extensions: 4834396
Number of successful extensions: 28992
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 712
Number of HSP's that attempted gapping in prelim test: 26080
Number of HSP's gapped (non-prelim): 2682
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
224128117	271	predicted protein [Populus trichocarpa]	0.95	0.981	0.799	1e-120
356498525	287	PREDICTED: uncharacterized protein C9orf	0.975	0.951	0.774	1e-116
358248108	288	uncharacterized protein LOC100812323 [Gl	0.975	0.947	0.767	1e-116
225437728	270	PREDICTED: uncharacterized protein LOC10	0.95	0.985	0.772	1e-107
297744059	298	unnamed protein product [Vitis vinifera]	0.960	0.902	0.768	1e-107
255556659	293	Protein C9orf78, putative [Ricinus commu	0.957	0.914	0.760	1e-107
449463519	293	PREDICTED: uncharacterized protein LOC10	0.964	0.921	0.701	1e-106
297848438	277	hypothetical protein ARALYDRAFT_887370 [	0.939	0.949	0.735	1e-105
449481099	305	PREDICTED: uncharacterized LOC101215146	0.964	0.885	0.663	1e-102
217071714	291	unknown [Medicago truncatula]	0.992	0.955	0.708	1e-102

>gi|224128117|ref|XP_002320248.1| predicted protein [Populus trichocarpa] gi|222861021|gb|EEE98563.1| predicted protein [Populus trichocarpa]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/274 (79%), Positives = 242/274 (88%), Gaps = 8/274 (2%)

Query: 10  EKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAA 69
           +KK+NFRKR++EE+E +     DDE+ERRLALEE+KFLQKQRERKSGIPA+ +  Q+A  
Sbjct: 3   QKKRNFRKRTFEEDEHSKAS-DDDEQERRLALEEVKFLQKQRERKSGIPALATTSQTATT 61

Query: 70  AGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
                  K++EK +GDGEK+ELVLQDTFAQETAVMVEDPNML+YVEQELAKKRGKNID  
Sbjct: 62  VAA----KLTEKADGDGEKEELVLQDTFAQETAVMVEDPNMLQYVEQELAKKRGKNIDAT 117

Query: 130 DRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 187
           D+VE +LK AEDELYKIPEHLK  KRNSEESSTQWTTGIAEVQLPIEYKL+NIEETEAAK
Sbjct: 118 DQVETELKRAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAK 177

Query: 188 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDG-AGSRP 246
           KLLQEKRLMGR KS+FSIPSSYSADYFQRGRDYAEKLRR+HPELYKDR  QDD  AGS+P
Sbjct: 178 KLLQEKRLMGRPKSEFSIPSSYSADYFQRGRDYAEKLRRDHPELYKDRSLQDDAVAGSKP 237

Query: 247 TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
            DNSTDAAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 238 ADNSTDAAGRRQAATDEFMLERFRKRERHRVMRR 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498525|ref|XP_003518101.1| PREDICTED: uncharacterized protein C9orf78 homolog [Glycine max]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/284 (77%), Positives = 243/284 (85%), Gaps = 11/284 (3%)

Query: 7   QKKEKKKNFRKRSY-----EEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIP 61
           +++++KKN+RKRS      E  +  +N  SDDE ERR+ALEEIK LQKQRERKSGIPA P
Sbjct: 5   KQQQRKKNYRKRSAPTDKDELPQSQSNNESDDERERRMALEEIKLLQKQRERKSGIPANP 64

Query: 62  SALQSAAAAGGGGLTKVSEKNEGDG-EKDELVLQDTFAQETAVMVEDPNMLKYVEQELAK 120
           S LQ  +  GGG   K +EKN+GDG EKDELVLQDTFAQETAVM EDPNM+KY+E ELAK
Sbjct: 65  S-LQVQSGTGGGLAAKAAEKNDGDGGEKDELVLQDTFAQETAVMDEDPNMVKYIEHELAK 123

Query: 121 KRGKNIDVNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLK 178
           KRG+ ID  D+VEN+LK AEDELYKIPEHLK  +RNSEESSTQWTTGIAEVQLPIEYKLK
Sbjct: 124 KRGRKIDAADQVENELKRAEDELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLK 183

Query: 179 NIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQ 238
           NIEETEAAKKLLQEKRLMGR KSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDR  Q
Sbjct: 184 NIEETEAAKKLLQEKRLMGRTKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRSHQ 243

Query: 239 DDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMRR 280
           DD +GS+  D+STDAAG+  RQAATD+FMLERFRKRERHRVMRR
Sbjct: 244 DDSSGSKQNDSSTDAAGAVQRQAATDEFMLERFRKRERHRVMRR 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248108|ref|NP_001239815.1| uncharacterized protein LOC100812323 [Glycine max] gi|255645199|gb|ACU23097.1| unknown [Glycine max]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/284 (76%), Positives = 242/284 (85%), Gaps = 11/284 (3%)

Query: 7   QKKEKKKNFRKRSYEEEEE-----TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIP 61
           Q++++KKN+RKRS   +E+      +N  SDDE ERR+ALEEIK LQKQRERKSGIPA P
Sbjct: 6   QQQQRKKNYRKRSAPTDEDELPQSQSNNESDDERERRMALEEIKLLQKQRERKSGIPANP 65

Query: 62  SALQSAAAAGGGGLTKVSEKNEGDG-EKDELVLQDTFAQETAVMVEDPNMLKYVEQELAK 120
           S LQ  +  GGG   K +EKN+GDG +KDELVLQDTFAQETAVM EDPNM+ Y+E ELAK
Sbjct: 66  S-LQVQSGTGGGLAAKAAEKNDGDGGDKDELVLQDTFAQETAVMDEDPNMVNYIEHELAK 124

Query: 121 KRGKNIDVNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLK 178
           KRG+ ID  D+ EN+LK AEDELYKIPEHLK  +RNSEESSTQWTTGIAEVQLPIEYKLK
Sbjct: 125 KRGRKIDAADQAENELKRAEDELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLK 184

Query: 179 NIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQ 238
           NIEETEAAKKLLQEKRLMGR KSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDR  Q
Sbjct: 185 NIEETEAAKKLLQEKRLMGRTKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRNHQ 244

Query: 239 DDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMRR 280
           DD +GS+  D+STDAAG+  RQAATD+FMLERFRKRERHRVMRR
Sbjct: 245 DDSSGSKKNDSSTDAAGAVQRQAATDEFMLERFRKRERHRVMRR 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437728|ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250416 [Vitis vinifera]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/273 (77%), Positives = 239/273 (87%), Gaps = 7/273 (2%)

Query: 11  KKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAA 70
           +KKNFRKRS E+++   N  S+DEEERRLALEE+KFLQKQRERK GIPAIP+ LQ+    
Sbjct: 2   QKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIPAIPT-LQTT--- 57

Query: 71  GGGGLTKVSEKNE-GDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
           G     KV+EKNE  DG+K+ELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRG+NID  
Sbjct: 58  GVTPTKKVAEKNEVPDGDKEELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGRNIDAT 117

Query: 130 DRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 187
           ++V NDLK A+DELY +PEHLK  +RNSEESSTQWTTGIAEVQLP+EYKL+NIEETEAAK
Sbjct: 118 NQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEVQLPVEYKLRNIEETEAAK 177

Query: 188 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPT 247
           KLLQ+KRLMGR K++F+IPSSYSADYFQRGRDYAEKLRREHPELYKD+G QD+G GSR  
Sbjct: 178 KLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHPELYKDKGVQDNGGGSRLP 237

Query: 248 DNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           D ST+ AG RQAATD+FML+RFRKRERHRVMRR
Sbjct: 238 DASTEVAGRRQAATDEFMLDRFRKRERHRVMRR 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744059|emb|CBI37029.3| unnamed protein product [Vitis vinifera]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/276 (76%), Positives = 241/276 (87%), Gaps = 7/276 (2%)

Query: 8   KKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSA 67
           K+ +KKNFRKRS E+++   N  S+DEEERRLALEE+KFLQKQRERK GIPAIP+ LQ+ 
Sbjct: 27  KEMQKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIPAIPT-LQTT 85

Query: 68  AAAGGGGLTKVSEKNE-GDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNI 126
              G     KV+EKNE  DG+K+ELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRG+NI
Sbjct: 86  ---GVTPTKKVAEKNEVPDGDKEELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGRNI 142

Query: 127 DVNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETE 184
           D  ++V NDLK A+DELY +PEHLK  +RNSEESSTQWTTGIAEVQLP+EYKL+NIEETE
Sbjct: 143 DATNQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEVQLPVEYKLRNIEETE 202

Query: 185 AAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGS 244
           AAKKLLQ+KRLMGR K++F+IPSSYSADYFQRGRDYAEKLRREHPELYKD+G QD+G GS
Sbjct: 203 AAKKLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHPELYKDKGVQDNGGGS 262

Query: 245 RPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           R  D ST+ AG RQAATD+FML+RFRKRERHRVMRR
Sbjct: 263 RLPDASTEVAGRRQAATDEFMLDRFRKRERHRVMRR 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556659|ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis] gi|223541430|gb|EEF42980.1| Protein C9orf78, putative [Ricinus communis]

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/292 (76%), Positives = 243/292 (83%), Gaps = 24/292 (8%)

Query: 11  KKKNFRKRSYEEEEE-----TTNKLS--DDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKRS EE E+       N  +  DDEEERRLALEE+KFLQKQRERKSGIPAI + 
Sbjct: 4   KKKNFRKRSIEEAEDPESSRNNNNATPDDDEEERRLALEEVKFLQKQRERKSGIPAILTP 63

Query: 64  LQSAAAA----------GGGGLT---KVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNM 110
             SA+++             GL    KV+EKN+GDGEK++LVLQDTFAQETAVMVEDPNM
Sbjct: 64  SSSASSSAAAAAAQLQQNSSGLVSSKKVTEKNDGDGEKEDLVLQDTFAQETAVMVEDPNM 123

Query: 111 LKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAE 168
           L YVEQELAKK GKN+D   +VEN+LK AEDELY IPEHLK  +RNSEESSTQWTTGIAE
Sbjct: 124 LMYVEQELAKKSGKNVDAT-QVENELKRAEDELYTIPEHLKVKRRNSEESSTQWTTGIAE 182

Query: 169 VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREH 228
           VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKS+FSIPSSYSADYFQRGRDYAEKLRREH
Sbjct: 183 VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSEFSIPSSYSADYFQRGRDYAEKLRREH 242

Query: 229 PELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           PELYKDR SQD+ AGS+P DN+TDA   R+AATD+FMLERFRKRERHRVMRR
Sbjct: 243 PELYKDRNSQDESAGSKPADNNTDAT-RREAATDEFMLERFRKRERHRVMRR 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463519|ref|XP_004149481.1| PREDICTED: uncharacterized protein LOC101215146 [Cucumis sativus]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/288 (70%), Positives = 230/288 (79%), Gaps = 18/288 (6%)

Query: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKR+  + E+        T    ++EEE R+ALEE+KFLQKQRER++GIPA+P  
Sbjct: 6   KKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPV 65

Query: 64  LQSAAAAGGGGL------TKVSEKNE---GDGEKDELVLQDTFAQETAVMVEDPNMLKYV 114
                 AG GG            KNE   G+G+KD+LVLQDTFAQETAVMVEDPNMLKY+
Sbjct: 66  SAQTTTAGAGGARSHKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYI 125

Query: 115 EQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLP 172
           EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLK  +RNS ESSTQWTTGIAEVQLP
Sbjct: 126 EQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLP 185

Query: 173 IEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELY 232
           IE+KLKNIEETEAAKKLLQEKR +GR+ S+FSIPSSYSADYF RGRDYAEKLRREHPELY
Sbjct: 186 IEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDYAEKLRREHPELY 245

Query: 233 KDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           KDR  QDDG+GS+P +  T+AAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 246 KDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR 293

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848438|ref|XP_002892100.1| hypothetical protein ARALYDRAFT_887370 [Arabidopsis lyrata subsp. lyrata] gi|297337942|gb|EFH68359.1| hypothetical protein ARALYDRAFT_887370 [Arabidopsis lyrata subsp. lyrata]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/280 (73%), Positives = 235/280 (83%), Gaps = 17/280 (6%)

Query: 12  KKNFRKRSYEEE--EETTNK--LSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSA 67
           K+NFRKRS+EEE  +   NK  +SD+EE+RRLALEE+KFLQK RERK GIPA+ +A  S 
Sbjct: 4   KRNFRKRSFEEEEEDNDVNKAAISDEEEKRRLALEEVKFLQKLRERKLGIPALSTAQSSI 63

Query: 68  AAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNID 127
                 G  K  EK E +GEK+ELVLQDTFAQETAV++EDPNM+KY+EQELAKKRGKNID
Sbjct: 64  ------GKVKPVEKTEAEGEKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGKNID 117

Query: 128 VNDRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEA 185
             + VEN+LK  EDELYKIP+HLK  KR+SEESSTQWTTGIAEVQLPIEYKLKNIEETEA
Sbjct: 118 DAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEA 177

Query: 186 AKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGS-QDDGAGS 244
           AKKLLQE+RLMGR KS+FSIPSSYSADYFQRG+DYAEKLRREHPELYKDRG  Q DG G+
Sbjct: 178 AKKLLQERRLMGRPKSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEGA 237

Query: 245 RP----TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           +P    ++N+ D+  SRQAATDQ MLERFRKRER+RVMRR
Sbjct: 238 KPSTSSSNNNADSGKSRQAATDQIMLERFRKRERNRVMRR 277

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449481099|ref|XP_004156081.1| PREDICTED: uncharacterized LOC101215146 [Cucumis sativus]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/300 (66%), Positives = 230/300 (76%), Gaps = 30/300 (10%)

Query: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKR+  + E+        T    ++EEE R+ALEE+KFLQKQRER++GIPA+P  
Sbjct: 6   KKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPV 65

Query: 64  ------------------LQSAAAAGGGGLTKVSEKNE---GDGEKDELVLQDTFAQETA 102
                             ++ +  A          KNE   G+G+KD+LVLQDTFAQETA
Sbjct: 66  SAQTTTAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETA 125

Query: 103 VMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLK--KRNSEESST 160
           VMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLK  +RNS ESST
Sbjct: 126 VMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESST 185

Query: 161 QWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDY 220
           QWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+ S+FSIPSSYSADYF RGRDY
Sbjct: 186 QWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDY 245

Query: 221 AEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
           AEKLRREHPELYKDR  QDDG+GS+P +  T+AAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 246 AEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR 305

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071714|gb|ACJ84217.1| unknown [Medicago truncatula]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/292 (70%), Positives = 234/292 (80%), Gaps = 14/292 (4%)

Query: 1   MENPIPQKKEKKKNFRKRSYEEEEETT-----NKLSDDEEERRLALEEIKFLQKQRERKS 55
           MEN   ++K ++KN+RKR+  EE +       N  SDDE ERRLALEEIK LQKQRERKS
Sbjct: 1   MENS-KEEKPRRKNYRKRTPTEEHDQPPQSQQNNDSDDESERRLALEEIKLLQKQRERKS 59

Query: 56  GIPAIPSALQSAAAAGGGGLTKV---SEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLK 112
           GIPA  +  QS      G  +K    ++     G+KD+LVLQDTFAQETAVM EDPNM+K
Sbjct: 60  GIPATLTLQQSQPGISSGLASKAVDKNDAGGDGGDKDDLVLQDTFAQETAVMDEDPNMVK 119

Query: 113 YVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHL--KKRNSEESSTQWTTGIAEVQ 170
           Y+ QELAKKRG+NID  D+VEN+LK AEDELY IP+HL  KKRNSEESSTQWTTGIAE+Q
Sbjct: 120 YIGQELAKKRGRNIDEEDQVENELKRAEDELYTIPDHLKVKKRNSEESSTQWTTGIAEIQ 179

Query: 171 LPIEYKLKNIEETEAAKKLLQEKRLM-GRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP 229
           LPIEYKLKNIEETEAAKKLLQEKRLM GRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP
Sbjct: 180 LPIEYKLKNIEETEAAKKLLQEKRLMVGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP 239

Query: 230 ELYKDRGSQDDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMR 279
           ELYKDR  QDD + S+  ++S+DA G+  RQAATDQFMLERF+KRERHRV R
Sbjct: 240 ELYKDRSQQDDNSASKQNESSSDAPGAVQRQAATDQFMLERFKKRERHRVRR 291

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2204888	279	AT1G02330 "AT1G02330" [Arabido	0.935	0.939	0.702	1.6e-93
UNIPROTKB|F1P4D4	293	C17H9orf78 "Uncharacterized pr	0.703	0.672	0.344	7e-22
UNIPROTKB|F1RQE0	289	C9orf78 "Uncharacterized prote	0.7	0.678	0.338	3.5e-20
UNIPROTKB|Q1JQC8	265	C11H9ORF78 "Uncharacterized pr	0.7	0.739	0.333	7.2e-20
UNIPROTKB|Q9NZ63	289	C9orf78 "Uncharacterized prote	0.7	0.678	0.333	7.2e-20
MGI|MGI:2385132	289	BC005624 "cDNA sequence BC0056	0.7	0.678	0.333	7.2e-20
ZFIN|ZDB-GENE-041010-15	289	zgc:103692 "zgc:103692" [Danio	0.707	0.685	0.306	2.5e-19

TAIR|locus:2204888 AT1G02330 "AT1G02330" [Arabidopsis thaliana (taxid:3702)]

 Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
 Identities = 196/279 (70%), Positives = 220/279 (78%)

Query:    14 NFRKRSYEEEEETT--NK--LSXXXXXXXXXXXXIKFLQKQRERKSGIPAIPSALQSXXX 69
             NFRKRS+EEEEE    NK  +S            +KFLQK RERK GIPA+ S  QS   
Sbjct:     6 NFRKRSFEEEEEDNDVNKAAISEEEEKRRLALEEVKFLQKLRERKLGIPALSSTAQSSIG 65

Query:    70 XXXXXLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
                    K  EK E +GEK+ELVLQDTFAQETAV++EDPNM+KY+EQELAKKRG+NID  
Sbjct:    66 K-----VKPVEKTETEGEKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGRNIDDA 120

Query:   130 DRVENDLKHAEDELYKIPEHLK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 187
             + VEN+LK  EDELYKIP+HLK  KR+SEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK
Sbjct:   121 EEVENELKRVEDELYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 180

Query:   188 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGS-QDDGAGSRP 246
             KLLQE+RLMGR KS+FSIPSSYSADYFQRG+DYAEKLRREHPELYKDRG  Q DG  ++P
Sbjct:   181 KLLQERRLMGRPKSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEAAKP 240

Query:   247 -----TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 280
                  T+N+ D+  SRQAATDQ MLERFRKRER+RVMRR
Sbjct:   241 STSSSTNNNADSGKSRQAATDQIMLERFRKRERNRVMRR 279

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P4D4 C17H9orf78 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 73/212 (34%), Positives = 115/212 (54%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  N+  +
Sbjct:    83 MKKLKERGKDRINEEEDLNLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVENEEQK 140

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
               LK+AED LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK K
Sbjct:   141 VKLKNAEDSLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEEAKAK 200

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLR---REHPELYKDRGSQDDGAGSR 245
             LL E++   +      +P++ + +Y Q  R Y E+L    R + E  K R  +  G   R
Sbjct:   201 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPVRRNKEEPKPRPLRV-GDTER 259

Query:   246 PTDNSTDAAGSR---QAATDQFMLERFRKRER 274
             P    +     R   + ATD +  E+F+K  R
Sbjct:   260 PEPERSPPNRKRPPNEKATDDYHYEKFKKMNR 291

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1RQE0 C9orf78 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 72/213 (33%), Positives = 114/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    79 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 136

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
                K+AED LY++PE+++    KR  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 VKPKNAEDCLYELPENIRVSSAKRTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 241
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   242 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 274
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q1JQC8 C11H9ORF78 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 71/213 (33%), Positives = 114/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    55 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 112

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
                K+AED LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   113 VKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 172

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 241
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   173 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 232

Query:   242 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 274
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   233 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 263

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9NZ63 C9orf78 "Uncharacterized protein C9orf78" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 71/213 (33%), Positives = 114/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    79 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 136

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
                K+AED LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 VKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 241
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   242 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 274
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:2385132 BC005624 "cDNA sequence BC005624" [Mus musculus (taxid:10090)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 71/213 (33%), Positives = 113/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I   +  +
Sbjct:    79 MKKLKERGKDKVSEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEQEEQK 136

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
                K+AED LY++PE+++    K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 AKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 241
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   242 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 274
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-041010-15 zgc:103692 "zgc:103692" [Danio rerio (taxid:7955)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 65/212 (30%), Positives = 111/212 (52%)

Query:    75 LTKVSEKNEG-DGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + KV +++     ++++L L  +F+ ET    ED +M+KY+E EL KK+G  ++  ++ +
Sbjct:    78 MKKVKDRSRDMTVDENDLNLGTSFSAETNRRDEDADMMKYIETELKKKKGM-VEAEEQ-K 135

Query:   134 NDLKHAEDELYKIPEHLK----KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 188
               +K+ ED LY++PE++     K+  E  S Q  +GI EV L I+ K+KNI  TE AK K
Sbjct:   136 VKVKNPEDLLYELPENINVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIINTEEAKAK 195

Query:   189 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAE------KLRREHPELYKDRGSQDDGA 242
             LL E+R   +      +P++ + +Y Q  R Y E      +  RE P+    R    +  
Sbjct:   196 LLAEQRNKKKDSGTSFVPTNIAVNYVQHNRFYHEDSNAPQRRNREEPKARPLRVGDTEKP 255

Query:   243 GSRPTDNSTDAAGSRQAATDQFMLERFRKRER 274
                 +  +     + + ATD +  E+F+K  R
Sbjct:   256 APEASPPNFRKRPNNEKATDDYHYEKFKKMNR 287


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.127   0.344    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       254   0.00084  114 3  11 23  0.42    34
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  166 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.47u 0.11s 28.58t   Elapsed:  00:00:01
  Total cpu time:  28.47u 0.11s 28.58t   Elapsed:  00:00:01
  Start:  Fri May 10 09:30:51 2013   End:  Fri May 10 09:30:52 2013

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RC87	CI078_PONAB	No assigned EC number	0.3030	0.8321	0.8062	yes	no
Q3TQI7	CI078_MOUSE	No assigned EC number	0.3106	0.8321	0.8062	yes	no
Q9NZ63	CI078_HUMAN	No assigned EC number	0.3068	0.8321	0.8062	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
pfam07052	102	pfam07052, Hep_59, Hepatocellular carcinoma-associ	2e-29

>gnl|CDD|219280 pfam07052, Hep_59, Hepatocellular carcinoma-associated antigen 59

 Score =  107 bits (269), Expect = 2e-29
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 5/102 (4%)

Query: 95  DTFAQETAVMVEDPNMLKYVEQELAKKRGKNID----VNDRVENDLKHAEDELYKIPEHL 150
           D F +ET    ED +M+KY+E+ELAK++G+  D     +D+  N+LK AEDELY +PEHL
Sbjct: 1   DRFTKETGQRDEDAHMMKYIEEELAKRKGQAADADAEDSDKAANNLKRAEDELYALPEHL 60

Query: 151 K-KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQ 191
           K K+N E  S Q   GI EV L IE KLKNIE TE AK+ L 
Sbjct: 61  KVKKNEEMLSNQMLGGIPEVDLGIEAKLKNIERTEKAKRRLL 102

This family represents a conserved region approximately 100 residues long within mammalian hepatocellular carcinoma-associated antigen 59 and similar proteins. Family members are found in a variety of eukaryotes, mainly as hypothetical proteins. Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG3345	275	consensus Uncharacterized conserved protein [Funct	100.0
PF07052	104	Hep_59: Hepatocellular carcinoma-associated antige	100.0

>KOG3345 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=8.6e-71  Score=493.22  Aligned_cols=255  Identities=41%  Similarity=0.589  Sum_probs=208.7

Q ss_pred             ccccccccccccCCcchhhccCCCCchHHHHhhcHHHHHHHHHhhccCCCccccccccccccc--------cCCCccccc
Q 023577            7 QKKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAA--------AGGGGLTKV   78 (280)
Q Consensus         7 ~~~kkkKn~RkR~~~~d~e~~~~~~e~eee~~~~lee~kelQklR~R~~GI~a~~la~g~~~~--------~~gg~~~~~   78 (280)
                      .|+|.+..+++|...++++..   ++++++.++.|+||++||+||.|++||+.+.|++|.+.+        .+||++.+.
T Consensus         4 ~frk~~~k~~~rk~l~~~~~~---~eEeeerrl~leeikelQrlReRknGvs~v~lavgeeala~~d~~qm~~Ggmv~~k   80 (275)
T KOG3345|consen    4 IFRKVKFKIQKRKNLEDDDVA---AEEEEERRLALEEIKELQRLRERKNGVSEVELAVGEEALALEDPFQMKTGGMVDMK   80 (275)
T ss_pred             chhhhHHHHHHhhcchhhhhh---hhhHHHHHhhHHHHHHHHHHHhccCCcchhhhhhhhhhhhccCchhcccCcceehH
Confidence            344555556666654444422   566778899999999999999999999999999997433        277776655


Q ss_pred             ccccCCCC-cchhhhhhccchhcccccccchhHHHHHHHHHHHhhCCCCCCCccccccccchhHhhhcCchhhh----hc
Q 023577           79 SEKNEGDG-EKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLK----KR  153 (280)
Q Consensus        79 ~~k~~~~~-e~~~~~l~~~Ft~eT~~~deD~hMmkYIE~eLakRk~~~~~~~~~~~~~~~~~~~~Ly~~pe~l~----kr  153 (280)
                      ..+..+.. ..+.-+|+.+|+++|+.+|+|++||+|||++|+||+|..+.+.+.+...+++++||||.+|+||+    ++
T Consensus        81 K~k~~~mkeas~eqdlgtqFs~ET~~rdEdeem~KYIeqeLqkrkg~~~~e~eeqk~k~~naED~Ly~lpdhlk~ssskk  160 (275)
T KOG3345|consen   81 KLKERGMKEASEEQDLGTQFSAETNRRDEDEEMMKYIEQELQKRKGTSIVEHEEQKNKPKNAEDCLYELPDHLKVSSSKK  160 (275)
T ss_pred             HhhhhhhhHHHHhhhhhHHHHHHHhcccccHHHHHHHHHHHHHhhccchhhhhhhhcccCCHHHHHHhhhhhhccccccc
Confidence            55433322 22333589999999999999999999999999999998888887888999999999999999999    79


Q ss_pred             cccccccccccCCccccCChHHHhhcHHHHHHHHHHHHHHHhccCCCCCCCCCCccchhhhhcchhhHHHHHhhCccccc
Q 023577          154 NSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYK  233 (280)
Q Consensus       154 ~~e~~s~~~lsgI~EVDLGieaKlkNIe~TE~AKr~L~e~~~~~~~~~~~~~p~n~a~n~~qh~r~~~~~~~~~~~~~~~  233 (280)
                      ++||+|+|||+|||||||||++||+||++||+|||+|+++++++++++++|||+||+||||||+|||++.+.+. +    
T Consensus       161 s~EmlS~qml~GIpEVdLgI~~kikNI~eTE~aKrlLqe~~~~~~~g~~~~ipt~~a~ny~qr~rf~~e~~~~~-r----  235 (275)
T KOG3345|consen  161 SEEMLSNQMLSGIPEVDLGIDAKIKNIEETEDAKRLLQEQQNKKKDGETSFIPTNMAVNYVQRNRFYHEELNRD-R----  235 (275)
T ss_pred             hHHHHHHHHHcCCcccccchhhhhhhHHhhHHHHHHHHHHHhccCCCCCCCCccchhhhHHHhhhhhHHHhccc-h----
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998652 1    


Q ss_pred             ccCCCCCCCCCCCCCCC---CCCCCCCCCcchHHHHHHHHHHHHh
Q 023577          234 DRGSQDDGAGSRPTDNS---TDAAGSRQAATDQFMLERFRKRERH  275 (280)
Q Consensus       234 ~~~~~~~~~~~~~~~~~---~~~~~~~~~ATDd~~~erFrK~~r~  275 (280)
                           ..++ ..+.++.   +..++.+++||||||||||||++|+
T Consensus       236 -----~~d~-e~~ep~~s~~~~~np~~~~atddyhyekfrk~~rr  274 (275)
T KOG3345|consen  236 -----QADT-EKAEPSTSPSTNNNPDRQAATDDYHYEKFRKRERR  274 (275)
T ss_pred             -----hccc-cccCCCCCccccCChhhhhhhhHHHHHHHHHHhcc
Confidence                 1111 1222222   2234569999999999999999994

>PF07052 Hep_59: Hepatocellular carcinoma-associated antigen 59; InterPro: IPR010756 This family represents a conserved region approximately 100 residues long within mammalian hepatocellular carcinoma-associated antigen 59 and similar proteins

Probab=100.00  E-value=5.7e-35  Score=235.87  Aligned_cols=97  Identities=48%  Similarity=0.694  Sum_probs=84.6

Q ss_pred             ccchhcccccccchhHHHHHHHHHHHhhCCCCCC------CccccccccchhHhhhcCchhhh-hccccccccccccCCc
Q 023577           95 DTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDV------NDRVENDLKHAEDELYKIPEHLK-KRNSEESSTQWTTGIA  167 (280)
Q Consensus        95 ~~Ft~eT~~~deD~hMmkYIE~eLakRk~~~~~~------~~~~~~~~~~~~~~Ly~~pe~l~-kr~~e~~s~~~lsgI~  167 (280)
                      ++|++|||++|||+|||+|||++|++|++.....      .......+.+..++||.+|++|+ +++.+++|++||||||
T Consensus         1 ~~F~~qT~~~d~DkhM~~YIE~eL~kr~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~l~~~~~~~~~s~~ml~gI~   80 (104)
T PF07052_consen    1 DRFTAQTGQRDVDKHMMKYIEEELAKRKGRAAESDAEQSDSESSANNSDPPEDELYRLPEHLKAKRSEEMLSNQMLGGIP   80 (104)
T ss_pred             CcccccccchhHHHHHHHHHHHHHHHhhccCcccccccccccccccccCcHHHHHHhCcHHhhcccccccccHHHhcCCc
Confidence            5899999999999999999999999999976211      12223455566789999999999 8899999999999999


Q ss_pred             cccCChHHHhhcHHHHHHHHHHHH
Q 023577          168 EVQLPIEYKLKNIEETEAAKKLLQ  191 (280)
Q Consensus       168 EVDLGieaKlkNIe~TE~AKr~L~  191 (280)
                      |||||+++||+||++||+|||.|+
T Consensus        81 EVdLg~eaklkNIe~TE~Akr~ll  104 (104)
T PF07052_consen   81 EVDLGIEAKLKNIERTEKAKRRLL  104 (104)
T ss_pred             eecCcHHHHHhhHHHHHHHHHhcC
Confidence            999999999999999999998774

Family members are found in a variety of eukaryotes, mainly as hypothetical proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 3e-05
 Identities = 33/258 (12%), Positives = 65/258 (25%), Gaps = 83/258 (32%)

Query: 17  KRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQ-----RERKSGIPAIPSALQSAAAAG 71
             ++   +  +  L+ DE +  L     K+L  +     RE  +  P             
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLL----KYLDCRPQDLPREVLTTNP------------- 327

Query: 72  GGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNID--VN 129
                                L    A     + +        +     K    I+  +N
Sbjct: 328 -------------------RRL-SIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 130 DRVENDLKHAEDELY------KIPEHL---------------------KKRNSEESSTQW 162
                + +   D L        IP  L                     K    E+   + 
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424

Query: 163 TTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLM-GRAKSDFSIPS--SYSADYFQ---R 216
           T  I  + L  E K+K   E    + ++    +       D   P    Y   +     +
Sbjct: 425 TISIPSIYL--ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 217 GRDYAEKLRREHPELYKD 234
             ++ E++      ++ D
Sbjct: 483 NIEHPERM-TLFRMVFLD 499

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 42/221 (19%), Positives = 73/221 (33%), Gaps = 51/221 (23%)

Query: 33  DEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELV 92
           D  +  L+ EEI  +   ++  SG   +   L S           V +  E     +   
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM------VQKFVEEVLRINYKF 93

Query: 93  LQDTFAQETAVMVEDP--NMLKYVEQELAKKRGKNIDVNDRVEND----LKHA---EDEL 143
           L      E       P      Y+EQ             DR+ ND     K+        
Sbjct: 94  LMSPIKTEQ----RQPSMMTRMYIEQR------------DRLYNDNQVFAKYNVSRLQPY 137

Query: 144 YKIPEHLKKRNSEE---------SSTQWTTGIA----EVQLPIEYK-----LKNIEETEA 185
            K+ + L +    +         S   W         +VQ  +++K     LKN    E 
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 186 AKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRR 226
             ++LQ  +L+ +   +++  S +S++   R      +LRR
Sbjct: 198 VLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00