Citrus Sinensis ID: 023593

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD
Secondary Structure (PSIPRED)
cEEEEHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccEcccccHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHEHHHHHEccccccHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
milvnkfvlsgynfdaGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEvdylsrtpllrlpsfWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVgslnkiplsVAGILLfkvptslensasiFFGKLALLNGLD
Flexible Loop (DISEMBL)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSlensasiffgklallngld
Low Complexity Region (SEG)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD
Disordered region (IsUnstruct)
*ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN***
Disordered Region (DISOPRED)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK*VTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD
Disordered Region (DISEMBL)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD
Disordered Region (DISPRO)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q941R4	333	GDP-mannose transporter G	yes	no	0.978	0.822	0.854	1e-127
Q84L09	375	GDP-mannose transporter G	no	no	0.978	0.730	0.675	1e-106
Q2UTL1	381	GDP-mannose transporter O	yes	no	0.939	0.690	0.290	2e-31
Q4WTQ6	382	GDP-mannose transporter O	yes	no	0.932	0.683	0.305	6e-31
B0Y384	382	GDP-mannose transporter O	N/A	no	0.932	0.683	0.305	6e-31
Q2AAF6	329	GDP-mannose transporter O	yes	no	0.932	0.793	0.307	8e-31
A1CZJ3	382	GDP-mannose transporter 1	N/A	no	0.932	0.683	0.302	2e-30
A3LWX1	327	GDP-mannose transporter O	yes	no	0.935	0.801	0.307	3e-30
A1C9R4	381	GDP-mannose transporter O	N/A	no	0.932	0.685	0.302	3e-30
A2R9P4	381	GDP-mannose transporter O	yes	no	0.932	0.685	0.288	5e-30

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/274 (85%), Positives = 256/274 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI+LF VPTSL+NSASI FG +A
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 320

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1

 Score =  383 bits (984), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/274 (67%), Positives = 226/274 (82%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MI++NK VLS YNF+AG+SLM+YQN IS + V +L   GV+S E   W+LI+VW+PVNVI
Sbjct: 92  MIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVI 151

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML++ M+SLKYINVAMVT+LKN TN++T +GE+Y+F KR +N+VWAA+F+MIISAIS
Sbjct: 152 FVGMLVSGMYSLKYINVAMVTILKNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAIS 211

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDL+F AVGY WQ+ NCFLTASYSLTLRRVMD AKQ TKSG+LNE SMVLLNN LS+
Sbjct: 212 GGITDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSI 271

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           P G++L+I+  E  Y+  T + +   FW+V T SGFLGLAISFTSMWFLHQTG TTYSLV
Sbjct: 272 PFGIILIILLGEWRYVISTDVTKDSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLV 331

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNK+P+S+AG++LF VP SL N  SI FG  A
Sbjct: 332 GSLNKVPISLAGLVLFNVPLSLPNLFSILFGLFA 365

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2UTL1|GMT_ASPOR GDP-mannose transporter OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gmt1 PE=3 SV=2

 Score =  136 bits (342), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 151/289 (52%), Gaps = 26/289 (8%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + ++ +    F G+I+    +    K W P++++
Sbjct: 58  MTVMNKYVLSGLDFNLNFFLLCVQSIVCIIAIQTCKFCGLITYRDFSADEAKKWFPISLL 117

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 118 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 177

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 178 AAWADIK-HAVESSGDTSAQVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 229

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNE---VDYLSRTPLLRLPSFWLVMTLSGFLGLAIS 222
             +F  +  NN LS+P+ V+L  +  +    +     P     S    M LSG   + IS
Sbjct: 230 FKDFDTMFYNNLLSIPVLVVLTGLMEDWSSANIDRNFPQADRSSIMFAMILSGLSSVFIS 289

Query: 223 FTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           +TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct: 290 YTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIAVG 338

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|Q4WTQ6|GMT_ASPFU GDP-mannose transporter OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gmt1 PE=3 SV=1

 Score =  134 bits (338), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 149/291 (51%), Gaps = 30/291 (10%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       PS         M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVG 339

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|B0Y384|GMT_ASPFC GDP-mannose transporter OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=gmt1 PE=3 SV=1

 Score =  134 bits (338), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 149/291 (51%), Gaps = 30/291 (10%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       PS         M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVG 339

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804)

>sp|Q2AAF6|GMT_PICPA GDP-mannose transporter OS=Komagataella pastoris GN=VIG4 PE=3 SV=1

 Score =  134 bits (337), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 149/283 (52%), Gaps = 22/283 (7%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M + NK+ +SG +F+    L+  Q  + +  ++ L  L VI+         K W P+ V+
Sbjct: 30  MTVTNKYAVSGVDFNFNFFLLAVQGIVCITLISSLKQLNVITFREFNKVEAKKWFPIAVL 89

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  R  N    +  LM++S+  
Sbjct: 90  LVVMIYTSSKALQYLSIPIYTIFKNLTIILIAYGEVIWFGGRVTNLALGSFVLMVLSSAV 149

Query: 121 GGITD-------LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
               D       L+F+ +GY W   NCF +A++ L +R+ +       K  N  +F  + 
Sbjct: 150 ASYGDSNVDTGKLNFN-IGYFWMFTNCFSSAAFVLFMRKRI-------KLTNFKDFDTMY 201

Query: 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLP-----SFWLVMTLSGFLGLAISFTSMWF 228
            NN LS+P  +LL       D+ ++      P     +    M +SG   + IS+TS W 
Sbjct: 202 YNNLLSIP--ILLFASLTTEDWSAKNIAQNFPEDTKYAVIASMIISGMSAVGISYTSAWC 259

Query: 229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           +  T +TTYS+VG+LNK+P++++G+L FK P +  + +SIF G
Sbjct: 260 VRVTSSTTYSMVGALNKLPIALSGLLFFKAPINFYSISSIFIG 302

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Pichia pastoris (taxid: 4922)

>sp|A1CZJ3|GMT1_NEOFI GDP-mannose transporter 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gmt1 PE=3 SV=1

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 30/291 (10%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGTDFNLNFFLLCVQSIVCIVAIQTCKSSKLITYRDFNSDEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+Y+++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGMTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       P          M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANIARNFPPADRNGILFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVG 339

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|A3LWX1|GMT_PICST GDP-mannose transporter OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=VRG4 PE=3 SV=1

 Score =  132 bits (332), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 152/286 (53%), Gaps = 24/286 (8%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M + NK+VLSG++F+    L+  Q+ + +VT+  L   GVI+         + W P+ V+
Sbjct: 26  MTVTNKYVLSGFSFNMNFLLLAVQSIVCIVTIGSLKSFGVITYRQFNKEEARKWSPIAVL 85

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  +      ++  LM+ S++ 
Sbjct: 86  LVIMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGKVTTMALSSFLLMVFSSVV 145

Query: 121 G--------GITDLSFHA--VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFS 170
                    G  + SF A  +GY W   NCF +A++ L +R+ +       K  N  +F 
Sbjct: 146 AWYGDEAVSGSGNESFIALYLGYFWMATNCFASAAFVLIMRKRI-------KLTNFKDFD 198

Query: 171 MVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLAISFTS 225
            +  NN LS+P+ +   I+F   D+ +    +  PS         M LSG   + IS+ S
Sbjct: 199 TMYYNNLLSIPILLASSIIFE--DWSAENLAVNFPSDNRTATIAAMVLSGASSVGISYCS 256

Query: 226 MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
            W +  T +TTYS+VG+LNK+P++++G++ F    +  + ASIF G
Sbjct: 257 AWCVRVTSSTTYSMVGALNKLPIALSGLVFFPAAVNFWSVASIFVG 302

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (taxid: 322104)

>sp|A1C9R4|GMT_ASPCL GDP-mannose transporter OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=gmt1 PE=3 SV=1

 Score =  132 bits (332), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 30/291 (10%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + +V +       +I+         K W P+ ++
Sbjct: 59  MTVMNKYVLSGTDFNLNFLLLCVQSIVCIVAIQTCKASKLITYRDFNADEAKKWFPITLL 118

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 119 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W +INC  T+SY L +R+ +       K  N
Sbjct: 179 AAWADIK-HAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTN 230

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VLLV+ F   D+ S       P          M LSG   + 
Sbjct: 231 FKDFDTMFYNNLLSIP--VLLVLTFLMEDWSSANITRNFPPADRNGIMFAMILSGLSSVF 288

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           IS+TS W +  T +TTYS+VG+LNK+P++V+G++ F  P +  + ++I  G
Sbjct: 289 ISYTSAWCVRVTSSTTYSMVGALNKLPIAVSGLIFFDAPVTFPSVSAIVVG 339

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|A2R9P4|GMT_ASPNC GDP-mannose transporter OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=gmt1 PE=3 SV=1

 Score =  131 bits (330), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 151/291 (51%), Gaps = 30/291 (10%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M ++NK+VLSG +F+    L+  Q+ + ++ +      G+I+    +    + W P+ ++
Sbjct: 58  MTVMNKYVLSGTDFNLNFFLLCIQSLVCIIAIQTCKSCGLITYRDFSADEARKWFPITLL 117

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F          +  LM++S+I 
Sbjct: 118 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 177

Query: 121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
               D+  HAV               GY W ++NC  T+SY L +R+ +       K  N
Sbjct: 178 AAWADIK-HAVESNGDATAKVSTLNAGYIWMLVNCLCTSSYVLGMRKRI-------KLTN 229

Query: 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRT-----PLLRLPSFWLVMTLSGFLGLA 220
             +F  +  NN LS+P  VL+V+     D+ S       P +   S    M LSG   + 
Sbjct: 230 FKDFDTMFYNNLLSIP--VLIVLSAFLEDWSSTNVNRNFPPMDRNSIVFAMILSGLSSVF 287

Query: 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
           IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct: 288 ISYTSAWCVRVTSSTTYSMVGALNKLPIAISGLIFFDAPVTFPSVSAIVVG 338

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
296088545	648	unnamed protein product [Vitis vinifera]	0.978	0.422	0.890	1e-138
224080961	336	predicted protein [Populus trichocarpa]	0.978	0.815	0.897	1e-138
224093398	300	predicted protein [Populus trichocarpa]	0.978	0.913	0.890	1e-137
449513327	336	PREDICTED: GDP-mannose transporter GONST	0.978	0.815	0.886	1e-136
449459266	543	PREDICTED: GDP-mannose transporter GONST	0.978	0.504	0.886	1e-135
356507466	340	PREDICTED: GDP-mannose transporter GONST	0.978	0.805	0.857	1e-132
357464677	342	GDP-mannose transporter [Medicago trunca	0.978	0.801	0.879	1e-128
297836010	332	GONST1 [Arabidopsis lyrata subsp. lyrata	0.978	0.825	0.854	1e-125
15487237	333	GDP-Mannose transporter [Arabidopsis tha	0.978	0.822	0.854	1e-125
18397301	333	GDP-mannose transporter [Arabidopsis tha	0.978	0.822	0.854	1e-125

>gi|296088545|emb|CBI37536.3| unnamed protein product [Vitis vinifera]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/274 (89%), Positives = 263/274 (95%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS Y+F+AGISLM+YQN +SV+ VT+LSF G+I+TEPLTW+LIKVWLPVNVI
Sbjct: 360 MILVNKFVLSSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWLPVNVI 419

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK HDNRVWAALFLMIISAIS
Sbjct: 420 FVGMLVTSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKHHDNRVWAALFLMIISAIS 479

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+ +GY WQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNN+LSL
Sbjct: 480 GGITDLSFNGIGYTWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNTLSL 539

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLGV+L+ VFNEVDYLS TPLLRLP+FWLVMTLSGFLGLAISF+SMWFLHQTGATTYSLV
Sbjct: 540 PLGVILMFVFNEVDYLSTTPLLRLPTFWLVMTLSGFLGLAISFSSMWFLHQTGATTYSLV 599

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLSVAGI+LF VPTSLENSASIFFG +A
Sbjct: 600 GSLNKIPLSVAGIVLFHVPTSLENSASIFFGLVA 633

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080961|ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|222855694|gb|EEE93241.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/274 (89%), Positives = 263/274 (95%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK+VLS Y+F+AGISLM+YQNFISV+ V+ L FLGVISTEPLTWRLIKVWLPVN I
Sbjct: 50  MILVNKYVLSSYDFNAGISLMLYQNFISVIIVSTLRFLGVISTEPLTWRLIKVWLPVNFI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITA+GEMYLF K HD+RVWAALFLMIISAIS
Sbjct: 110 FVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFQKDHDSRVWAALFLMIISAIS 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSFHAVGYAWQI+NCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV+LNN+LSL
Sbjct: 170 GGITDLSFHAVGYAWQILNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVMLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG++L+ VFNEVDYLSRTPLLRLP+FWLV+TLSGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGLILIFVFNEVDYLSRTPLLRLPTFWLVVTLSGFLGLAISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLSVAGILLF VPTSL+NSASI FG LA
Sbjct: 290 GSLNKIPLSVAGILLFHVPTSLQNSASILFGLLA 323

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093398|ref|XP_002309911.1| predicted protein [Populus trichocarpa] gi|222852814|gb|EEE90361.1| predicted protein [Populus trichocarpa]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/274 (89%), Positives = 261/274 (95%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK+VLS Y+F+AGISLM+YQNFISV+ V+ LSFLGVISTEPLTWRLIKVWLPVN I
Sbjct: 18  MILVNKYVLSSYDFNAGISLMLYQNFISVIIVSTLSFLGVISTEPLTWRLIKVWLPVNFI 77

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVT+LKNVTNVITAVGEMYLF K HD+RVWAALFLMIISAIS
Sbjct: 78  FVGMLVTSMFSLKYINVAMVTILKNVTNVITAVGEMYLFQKDHDSRVWAALFLMIISAIS 137

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK VTKSGNLNEFSMV+LNN+LSL
Sbjct: 138 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKHVTKSGNLNEFSMVMLNNTLSL 197

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG++L+ VFNEVDYLSRTPLLRLP+FW V+TLSGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 198 PLGLILIFVFNEVDYLSRTPLLRLPTFWFVVTLSGFLGLAISFTSMWFLHQTGATTYSLV 257

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLSVAGI LF VPTSL+NSASI FG LA
Sbjct: 258 GSLNKIPLSVAGIFLFHVPTSLQNSASILFGLLA 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449513327|ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/274 (88%), Positives = 259/274 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLMVYQNFISV  VTILS +G+ISTEPLTWRL+KVW+PVNVI
Sbjct: 50  MILVNKLVLSSYDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWMPVNVI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITS+FSLKYINVAMVTVLKNVTNVITAVGEMYLF K HDNRVWAALFLMIISAI+
Sbjct: 110 FVGMLITSIFSLKYINVAMVTVLKNVTNVITAVGEMYLFGKHHDNRVWAALFLMIISAIT 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GG+TDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ+TKSGNLNEFSMVLLNN+LSL
Sbjct: 170 GGLTDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQLTKSGNLNEFSMVLLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ LV VFNE+DYLSRTPLLRLP FWLV+T SG LGL ISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGIFLVFVFNEIDYLSRTPLLRLPMFWLVITFSGVLGLGISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI LFKVPTS+ENSASIFFG LA
Sbjct: 290 GSLNKIPLSIAGIFLFKVPTSVENSASIFFGLLA 323

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459266|ref|XP_004147367.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/274 (88%), Positives = 259/274 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLMVYQNFISV  VTILS +G+ISTEPLTWRL+KVW+PVNVI
Sbjct: 50  MILVNKLVLSSYDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWMPVNVI 109

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITS+FSLKYINVAMVTVLKNVTNVITAVGEMYLF K HDNRVWAALFLMIISAI+
Sbjct: 110 FVGMLITSIFSLKYINVAMVTVLKNVTNVITAVGEMYLFGKHHDNRVWAALFLMIISAIT 169

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GG+TDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ+TKSGNLNEFSMVLLNN+LSL
Sbjct: 170 GGLTDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQLTKSGNLNEFSMVLLNNTLSL 229

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ LV VFNE+DYLSRTPLLRLP FWLV+T SG LGL ISFTSMWFLHQTGATTYSLV
Sbjct: 230 PLGIFLVFVFNEIDYLSRTPLLRLPMFWLVITFSGVLGLGISFTSMWFLHQTGATTYSLV 289

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI LFKVPTS+ENSASIFFG LA
Sbjct: 290 GSLNKIPLSIAGIFLFKVPTSVENSASIFFGLLA 323

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507466|ref|XP_003522487.1| PREDICTED: GDP-mannose transporter GONST1-like [Glycine max]

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/274 (85%), Positives = 256/274 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNK VLS Y+F+AGISLM+YQN ISV  V++LS LG++STEPLTWRLIKVWLPVN I
Sbjct: 52  MILVNKLVLSSYDFNAGISLMLYQNLISVAIVSVLSLLGLVSTEPLTWRLIKVWLPVNFI 111

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGML+TSMFSLKYINVAMVTVLKNVTNVITA+GEMYLF K HD +VWA+LFLMIISAI+
Sbjct: 112 FVGMLVTSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGKVWASLFLMIISAIT 171

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQ +NCFLTASYSL L+RVMDTAKQVTKSGNLNEFSMVLLNN+LS+
Sbjct: 172 GGITDLSFNAVGYAWQTLNCFLTASYSLMLQRVMDTAKQVTKSGNLNEFSMVLLNNTLSV 231

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ L+IVFNE+DYL  TPLLRLPSFWLVMT SGFLGLAISFTSMWFLHQTGATTYSLV
Sbjct: 232 PLGIFLIIVFNEMDYLLSTPLLRLPSFWLVMTFSGFLGLAISFTSMWFLHQTGATTYSLV 291

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGILLFKVPTSLENSASI FG LA
Sbjct: 292 GSLNKIPLSIAGILLFKVPTSLENSASILFGLLA 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464677|ref|XP_003602620.1| GDP-mannose transporter [Medicago truncatula] gi|355491668|gb|AES72871.1| GDP-mannose transporter [Medicago truncatula]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/274 (87%), Positives = 258/274 (94%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS Y+F+AGISLMVYQNFISV+ V++LS LG++STEPLTWRLIKVW PVNVI
Sbjct: 54  MILVNKFVLSSYDFNAGISLMVYQNFISVIIVSVLSLLGLVSTEPLTWRLIKVWFPVNVI 113

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLF+K H+ RVWAALFLMIISAI+
Sbjct: 114 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFSKHHEGRVWAALFLMIISAIT 173

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+A GY WQ +NCFLTASYSLTLRRVMDTAKQ TKSGNLNEF+MVLLNN+LSL
Sbjct: 174 GGITDLSFNATGYVWQTLNCFLTASYSLTLRRVMDTAKQYTKSGNLNEFTMVLLNNTLSL 233

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+ L++VFNEVDYL RTPLLRLPSFWLVMT SG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 234 PLGIFLMLVFNEVDYLLRTPLLRLPSFWLVMTFSGVLGLAISFTSMWFLHQTGATTYSLV 293

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLSVAGILLFKVPTSLENSASI FG LA
Sbjct: 294 GSLNKIPLSVAGILLFKVPTSLENSASILFGLLA 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836010|ref|XP_002885887.1| GONST1 [Arabidopsis lyrata subsp. lyrata] gi|297331727|gb|EFH62146.1| GONST1 [Arabidopsis lyrata subsp. lyrata]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/274 (85%), Positives = 256/274 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 46  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 105

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 106 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 165

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 166 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 225

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 226 PLGLLLSFSFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 285

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI+LF VPTSL+NSASI FG +A
Sbjct: 286 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 319

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15487237|emb|CAC69066.1| GDP-Mannose transporter [Arabidopsis thaliana]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/274 (85%), Positives = 256/274 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI+LF VPTSL+NSASI FG +A
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 320

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397301|ref|NP_565357.1| GDP-mannose transporter [Arabidopsis thaliana] gi|334184214|ref|NP_001189524.1| GDP-mannose transporter [Arabidopsis thaliana] gi|26006780|sp|Q941R4.2|GONS1_ARATH RecName: Full=GDP-mannose transporter GONST1; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1 gi|20198047|gb|AAD22687.2| putative vanadate resistance protein [Arabidopsis thaliana] gi|330251156|gb|AEC06250.1| GDP-mannose transporter [Arabidopsis thaliana] gi|330251158|gb|AEC06252.1| GDP-mannose transporter [Arabidopsis thaliana]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/274 (85%), Positives = 256/274 (93%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct: 47  MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
           FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct: 107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query: 121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
           GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct: 167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query: 181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
           PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct: 227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query: 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           GSLNKIPLS+AGI+LF VPTSL+NSASI FG +A
Sbjct: 287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 320

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2054090	333	GONST1 "AT2G13650" [Arabidopsi	0.978	0.822	0.854	1.1e-121
TAIR|locus:2025047	375	GONST2 "AT1G07290" [Arabidopsi	0.978	0.730	0.675	5.6e-100
CGD|CAL0002875	371	VRG4 [Candida albicans (taxid:	0.935	0.706	0.308	4.6e-34
UNIPROTKB|Q5A477	371	VRG4 "GDP-mannose transporter"	0.935	0.706	0.308	4.6e-34
POMBASE|SPAC144.18	345	vrg4 "Golgi GDP-mannose transp	0.935	0.759	0.314	1.2e-33
ASPGD|ASPL0000072017	379	gmtA [Emericella nidulans (tax	0.928	0.686	0.288	6.9e-31
SGD|S000003193	337	VRG4 "Golgi GDP-mannose transp	0.946	0.786	0.290	1.5e-28
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.860	0.630	0.270	8.4e-26
SGD|S000000841	249	HVG1 "Protein of unknown funct	0.721	0.811	0.299	7e-22
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.882	0.680	0.259	6.3e-21

TAIR|locus:2054090 GONST1 "AT2G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
 Identities = 234/274 (85%), Positives = 256/274 (93%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             MILVNKFVLS YNF+AGI LM+YQNF+SV+ V  LS +G+I+TEPLT RL+KVW PVNVI
Sbjct:    47 MILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVI 106

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
             FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK+HDNRVWAALFLMIISA+S
Sbjct:   107 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVS 166

Query:   121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
             GGITDLSF+AVGYAWQI NCFLTASYSLTLR+ MDTAKQVT+SGNLNEFSMVLLNN+LSL
Sbjct:   167 GGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSL 226

Query:   181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
             PLG+LL   FNE+DYL +TPLLRLPSFW+VMTLSG LGLAISFTSMWFLHQTGATTYSLV
Sbjct:   227 PLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLV 286

Query:   241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
             GSLNKIPLS+AGI+LF VPTSL+NSASI FG +A
Sbjct:   287 GSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVA 320

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI;IDA;IMP

TAIR|locus:2025047 GONST2 "AT1G07290" [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 185/274 (67%), Positives = 226/274 (82%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             MI++NK VLS YNF+AG+SLM+YQN IS + V +L   GV+S E   W+LI+VW+PVNVI
Sbjct:    92 MIILNKIVLSSYNFNAGVSLMLYQNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVI 151

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
             FVGML++ M+SLKYINVAMVT+LKN TN++T +GE+Y+F KR +N+VWAA+F+MIISAIS
Sbjct:   152 FVGMLVSGMYSLKYINVAMVTILKNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAIS 211

Query:   121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
             GGITDL+F AVGY WQ+ NCFLTASYSLTLRRVMD AKQ TKSG+LNE SMVLLNN LS+
Sbjct:   212 GGITDLTFDAVGYTWQLANCFLTASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSI 271

Query:   181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
             P G++L+I+  E  Y+  T + +   FW+V T SGFLGLAISFTSMWFLHQTG TTYSLV
Sbjct:   272 PFGIILIILLGEWRYVISTDVTKDSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLV 331

Query:   241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
             GSLNK+P+S+AG++LF VP SL N  SI FG  A
Sbjct:   332 GSLNKVPISLAGLVLFNVPLSLPNLFSILFGLFA 365

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0015784 "GDP-mannose transport" evidence=IGI

CGD|CAL0002875 VRG4 [Candida albicans (taxid:5476)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 88/285 (30%), Positives = 154/285 (54%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NK+VLSG++F+    L+  Q+ + +VT+  L  L +I+         K W P+  +
Sbjct:    70 MTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDEAKKWSPIAFL 129

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  +      ++  LM++S++ 
Sbjct:   130 LVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSSFLLMVLSSVI 189

Query:   121 GGITD---LSFHA------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSM 171
                 D   +  H       +GY W + NCF +A++ L +R      K++ K  N  +F  
Sbjct:   190 AYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMR------KRI-KLTNFKDFDT 242

Query:   172 VLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT-----LSGFLGLAISFTSM 226
             +  NN LS+P  +LL+  F   D+ S    L  P+   V T     LSG   + IS+ S 
Sbjct:   243 MYYNNLLSIP--ILLICSFIFEDWSSANVSLNFPADNRVTTITAMILSGASSVGISYCSA 300

Query:   227 WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
             W +  T +TTYS+VG+LNK+P++++G++ F+   +  + +SIF G
Sbjct:   301 WCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVG 345

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

GO:0006486 "protein glycosylation" evidence=IMP

GO:0005739 "mitochondrion" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

UNIPROTKB|Q5A477 VRG4 "GDP-mannose transporter" [Candida albicans SC5314 (taxid:237561)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 88/285 (30%), Positives = 154/285 (54%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NK+VLSG++F+    L+  Q+ + +VT+  L  L +I+         K W P+  +
Sbjct:    70 MTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYRQFNKDEAKKWSPIAFL 129

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ TS  +L+Y+++ + T+ KN+T ++ A GE+  F  +      ++  LM++S++ 
Sbjct:   130 LVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVTTMALSSFLLMVLSSVI 189

Query:   121 GGITD---LSFHA------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSM 171
                 D   +  H       +GY W + NCF +A++ L +R      K++ K  N  +F  
Sbjct:   190 AYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMR------KRI-KLTNFKDFDT 242

Query:   172 VLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT-----LSGFLGLAISFTSM 226
             +  NN LS+P  +LL+  F   D+ S    L  P+   V T     LSG   + IS+ S 
Sbjct:   243 MYYNNLLSIP--ILLICSFIFEDWSSANVSLNFPADNRVTTITAMILSGASSVGISYCSA 300

Query:   227 WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
             W +  T +TTYS+VG+LNK+P++++G++ F+   +  + +SIF G
Sbjct:   301 WCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVG 345

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IMP

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

POMBASE|SPAC144.18 vrg4 "Golgi GDP-mannose transporter Vrg4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 89/283 (31%), Positives = 151/283 (53%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M L NK+VLS   ++    L+  Q+ + V  + IL  L VI+     +R  K W P++ +
Sbjct:    27 MTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGILKRLKVINYRDFDFREAKFWFPISFL 86

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              V M+ T+  +L++++V + T+ KN+T +I A GE+  F          +  LM++S+I 
Sbjct:    87 LVAMIYTASKALQFLSVPVYTIFKNLTIIIIAYGEVLWFGGHVTALTLFSFGLMVLSSIV 146

Query:   121 GGITDL---SFHAV----GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
                 D+   SF +     GY W ++NC   A++ L +R      K++ K  N  +F  + 
Sbjct:   147 AAWADIQSSSFASQTLNSGYLWMVLNCLTNAAFVLAMR------KRI-KLTNFRDFDTMF 199

Query:   174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLP---SFWLVMTL--SGFLGLAISFTSMWF 228
              NN LS+P+ V+  + F E D+ +       P    F ++M +  SG   + IS+TS W 
Sbjct:   200 YNNLLSIPVLVICTL-FTE-DWSAENIAQNFPPDAKFGVLMAMAISGVSSVGISYTSAWC 257

Query:   229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
             +  T +TTYS+VG+LNK+PL++AG++ F  P +  +  +I  G
Sbjct:   258 VRVTSSTTYSMVGALNKLPLAIAGLVFFDAPITFGSVTAILLG 300

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

ASPGD|ASPL0000072017 gmtA [Emericella nidulans (taxid:162425)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 84/291 (28%), Positives = 148/291 (50%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M ++NK+VLS  +F+    L+  Q+ + ++ + +    G+I+         + W P+ ++
Sbjct:    58 MTVMNKYVLSS-DFNLNFFLLCVQSLVCIIAIQLCKACGLITYRDFNLDEARKWFPITLL 116

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
              +GM+ T   +L+++++ + T+ KN+T ++ A GE+  F     N    +  LM+ S+I 
Sbjct:   117 LIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTNLTLFSFGLMVFSSII 176

Query:   121 GGITDLSFHAV---------------GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165
                 D+  HA+               GY W +INC  T+SY L +R      K++ K  N
Sbjct:   177 AAWADIK-HAIESSGDATSKVSTLNAGYIWMLINCLCTSSYVLGMR------KRI-KLTN 228

Query:   166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPS-----FWLVMTLSGFLGLA 220
               +F  +  NN LS+P  VL+V      D+         PS         M LSG   + 
Sbjct:   229 FKDFDTMFYNNLLSIP--VLIVCSGILEDWSPANVARNFPSADRNGIMFAMILSGLSTVF 286

Query:   221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271
             IS+TS W +  T +TTYS+VG+LNK+P++++G++ F  P +  + ++I  G
Sbjct:   287 ISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIMVG 337

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IEA

GO:0051278 "fungal-type cell wall polysaccharide biosynthetic process" evidence=IEA

SGD|S000003193 VRG4 "Golgi GDP-mannose transporter" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 85/293 (29%), Positives = 149/293 (50%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             M + NKFV++  +F+    ++  Q+ +  +T+ IL  LG      L     K W P++ +
Sbjct:    35 MTVTNKFVVNLKDFNMNFVMLFVQSLVCTITLIILRILGYAKFRSLNKTDAKNWFPISFL 94

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAI- 119
              V M+ TS  +L+Y+ V + T+ KN+T ++ A GE+  F     +   ++  LM++S++ 
Sbjct:    95 LVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVV 154

Query:   120 ------------SGGITDLSFHAV-----GYAWQIINCFLTASYSLTLRRVMDTAKQVTK 162
                         +  + + +  AV     GY W   NC  +A + L +R      K++ K
Sbjct:   155 ATWGDQQAVAAKAASLAEGAAGAVASFNPGYFWMFTNCITSALFVLIMR------KRI-K 207

Query:   163 SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV-MTLSGFLGLAI 221
               N  +F  +  NN L+LP  +LL+  F   D+ S        +  L  M +SG   + I
Sbjct:   208 LTNFKDFDTMFYNNVLALP--ILLLFSFCVEDWSSVNLTNNFSNDSLTAMIISGVASVGI 265

Query:   222 SFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
             S+ S W +  T +TTYS+VG+LNK+P++++G++ F  P +  +  SIF G L+
Sbjct:   266 SYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLS 318

GO:0005739 "mitochondrion" evidence=IDA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IMP;IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IMP

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 68/251 (27%), Positives = 132/251 (52%)

Query:     7 FVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEP-LTWRLIKVWLPVNVIFVGML 65
             +V++ Y+F A   L+  Q  +++V + IL    ++          IK  +P++  ++  +
Sbjct:   110 YVMTTYDFSASNFLLFNQMVVTIVILHILKHFNILKINTNFEKETIKKLMPLSFCYIINV 169

Query:    66 ITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD 125
             +  + SLK +N+ M + LK +  V+  V E ++  K    ++ A++ +M+I A+  GITD
Sbjct:   170 LLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKIIASVVVMVIGAVVAGITD 229

Query:   126 LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVL 185
             LSF+++GY+  +++C   ASY + +++V         + N++ + M+  N+ LSLP+ + 
Sbjct:   230 LSFNSLGYSLVLLSCIFQASYLIYVKKV---------ASNMSTYDMLYYNSVLSLPITIF 280

Query:   186 LVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK 245
             L+IV  E++Y      L   SF     LS FLG  ++F   +        T S+ G +  
Sbjct:   281 LMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKN 340

Query:   246 IPLSVAGILLF 256
             I  ++ G ++F
Sbjct:   341 IASTIIGAMVF 351

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

SGD|S000000841 HVG1 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 70/234 (29%), Positives = 122/234 (52%)

Query:    64 MLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAI---- 119
             M+ TS  SL+Y+ V + T+ KN+T ++ A GE+  F  +  +    +  +M++S++    
Sbjct:     1 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGKVTSMELTSFIMMVLSSVVATW 60

Query:   120 ---------SGGITDLSFHAV---------GYAWQIINCFLTASYSLTLRRVMDTAKQVT 161
                      +  + DL    V         GY W   NC  +A + L +R+ +    ++T
Sbjct:    61 GDQQAIAIKASSLEDLDQELVESTIFVLNPGYLWMFTNCISSALFVLIMRKRI----RLT 116

Query:   162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV-MTLSGFLGLA 220
                N  ++  +  NN L+LPL  LLV  F   D+ ++   + L +  L  M +SG + + 
Sbjct:   117 ---NFKDYDTMFYNNVLALPL--LLVFSFIMEDWSTKNLSVNLSADSLAAMVISGLMSVG 171

Query:   221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
             IS+ S W +  T +TTYS+VG+LNK+P+++AG++ F  P +  +  SIF G L+
Sbjct:   172 ISYCSGWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPKNFLSFFSIFLGFLS 225

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015780 "nucleotide-sugar transport" evidence=IEA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 66/254 (25%), Positives = 128/254 (50%)

Query:     1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
             +++VNK VL+ Y F + ++L + Q F +VV +     L +IS     W +     P+ ++
Sbjct:    48 IVVVNKSVLTNYRFPSSLALGIGQMFATVVVLRGAKALNMISFPDFDWHVAYKVFPLPLL 107

Query:    61 FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
             +VG  +T +F  K +N+ M TVL+  + + T + E YL  ++    + A +F MI+ A  
Sbjct:   108 YVGNQLTGLFGTKQLNLPMFTVLRRFSILFTMLFEGYLLKQKFSWSIKATVFTMILGAFV 167

Query:   121 GGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSL 180
                +DL+F   GY +  +N  LTA+    +++ +D+ K++ K G L   +++++     +
Sbjct:   168 AASSDLAFDLQGYVFITLNNILTAANGAYMKQKLDS-KELGKYGLLYYNALLMI-----I 221

Query:   181 PLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240
             P  V+L     +V       +     F +   LS  +G  + ++ M   H   A T ++V
Sbjct:   222 PT-VVLAYFTGDVQKTLECEVWADYFFVIQFVLSCVMGFILMYSIMLCTHYNSALTTTIV 280

Query:   241 GSLNKIPLSVAGIL 254
             G +  I ++  G++
Sbjct:   281 GCIKNILVTYIGMV 294

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q941R4	GONS1_ARATH	No assigned EC number	0.8540	0.9785	0.8228	yes	no
A3LWX1	GMT_PICST	No assigned EC number	0.3076	0.9357	0.8012	yes	no
Q6CYD0	GMT_KLULA	No assigned EC number	0.3006	0.9464	0.8030	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	1e-35

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score =  129 bits (325), Expect = 1e-35
 Identities = 85/281 (30%), Positives = 141/281 (50%), Gaps = 18/281 (6%)

Query: 1   MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI 60
           M L NK+VLS   F+    L+  Q+ + VV + IL FL ++          K W P++ +
Sbjct: 21  MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFL 77

Query: 61  FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120
            V M+ TS  SL+Y+ V + T+ KN+T ++ A GE+  F  R  +    +  LM++S++ 
Sbjct: 78  LVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVV 137

Query: 121 GGITDLSFHA-------VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173
               D    A        GY W   NC  +A++ L +R+ +          N  +F  + 
Sbjct: 138 ATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT-------NFKDFDTMF 190

Query: 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTG 233
            NN LSLP+ +    +F +    +    L      + M +SG   + IS+ S W +  T 
Sbjct: 191 YNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCSVGISYCSAWCVRVTS 249

Query: 234 ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274
           +TTYS+VG+LNK+P+++AG++ F  P +  +  SI  G L+
Sbjct: 250 STTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS 290

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
PRK11689	295	aromatic amino acid exporter; Provisional	99.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.94
PRK15430	296	putative chloramphenical resistance permease RarD;	99.93
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
KOG1580	337	consensus UDP-galactose transporter related protei	99.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.87
KOG1581	327	consensus UDP-galactose transporter related protei	99.87
KOG1582	367	consensus UDP-galactose transporter related protei	99.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.84
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.81
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.79
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.78
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.75
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.7
KOG2765	416	consensus Predicted membrane protein [Function unk	99.63
COG2962	293	RarD Predicted permeases [General function predict	99.62
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.57
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.42
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.41
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.34
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.23
COG2510	140	Predicted membrane protein [Function unknown]	99.14
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.13
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.1
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.08
COG2510	140	Predicted membrane protein [Function unknown]	99.03
PRK15430	296	putative chloramphenical resistance permease RarD;	98.81
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.8
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.71
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.67
KOG2766	336	consensus Predicted membrane protein [Function unk	98.66
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
PLN00411	358	nodulin MtN21 family protein; Provisional	98.46
PRK11272	292	putative DMT superfamily transporter inner membran	98.3
COG2962	293	RarD Predicted permeases [General function predict	98.27
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.23
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.2
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.19
PRK11689	295	aromatic amino acid exporter; Provisional	98.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.18
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.11
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.08
PRK13499	345	rhamnose-proton symporter; Provisional	98.04
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.99
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.98
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.97
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.83
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.77
COG2076	106	EmrE Membrane transporters of cations and cationic	97.65
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.64
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.61
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.59
PRK11431	105	multidrug efflux system protein; Provisional	97.58
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.56
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.56
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.47
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.12
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.12
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.06
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.05
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.82
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.8
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.64
COG2076	106	EmrE Membrane transporters of cations and cationic	96.62
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.53
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.48
PRK11431	105	multidrug efflux system protein; Provisional	96.48
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.43
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.38
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.86
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.82
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.61
PRK13499	345	rhamnose-proton symporter; Provisional	95.38
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.21
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	94.75
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.15
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.74
KOG2765	416	consensus Predicted membrane protein [Function unk	92.7
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.67
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.8
KOG1581	327	consensus UDP-galactose transporter related protei	90.57
KOG1580	337	consensus UDP-galactose transporter related protei	89.76
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	89.4
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	89.31
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	88.45
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	86.98
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	84.66
KOG2766	336	consensus Predicted membrane protein [Function unk	82.98
KOG2922	335	consensus Uncharacterized conserved protein [Funct	82.93

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.2e-37  Score=261.55  Aligned_cols=271  Identities=41%  Similarity=0.668  Sum_probs=247.7

Q ss_pred             CeeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593            1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         1 ~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (280)
                      |+++||+++++|+||...++...|..++.+.+...++.|..+.|+++|++.|+++|.+++|.++.+++..+++|+|+|++
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~  106 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF  106 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence            57899999999998877777789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      +++|+.+|+++++.+..++|+|++++.|.++....+|......+|.+++..|+.|+..++++.+.+.++.||..+     
T Consensus       107 tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd-----  181 (314)
T KOG1444|consen  107 TVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVD-----  181 (314)
T ss_pred             HHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence            999999999999999999999999999999999999999999999999988999999999999999999999876     


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~  239 (280)
                        +.+.+.+++++|+++.+.|.+......+||++.. .+.+.+.++.++..+.++|+.+++++|+.++|.+.+|+++.++
T Consensus       182 --~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~ti  259 (314)
T KOG1444|consen  182 --SANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTI  259 (314)
T ss_pred             --cccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceee
Confidence              3468899999999999999999999899998832 2345566777899999999999999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ++...+..+.+.+.+++|+++++.+.+|+.+.+.|+++|
T Consensus       260 vG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y  298 (314)
T KOG1444|consen  260 VGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY  298 (314)
T ss_pred             hhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence            995556666666666678999999999999999999876

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-35  Score=260.70  Aligned_cols=268  Identities=15%  Similarity=0.173  Sum_probs=218.2

Q ss_pred             eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhH
Q 023593            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVT   81 (280)
Q Consensus         2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~   81 (280)
                      ++.||++++  .+++|.++++.|+.++.+...+.++.+..+.++.++|+++++++.|++++.+..++|+|++|+++++++
T Consensus        18 ~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        18 NIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            467999998  578899999999999987776664444444556788999999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT  161 (280)
Q Consensus        82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~  161 (280)
                      +++++.|+++++++++++|||++++++.+++++++|+.+....|.+.+..|+++++++++++|+|+++.||..++     
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~-----  170 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTI-----  170 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Confidence            999999999999999999999999999999999999998876677777789999999999999999999998652     


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhh-cCC----CcchHHHHHHHHHHHHHHH-HHHHHHHHHhhcChh
Q 023593          162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSR-TPL----LRLPSFWLVMTLSGFLGLA-ISFTSMWFLHQTGAT  235 (280)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~  235 (280)
                        .+.|+.++..|++..+.+.+.|.....++.....+ ...    ......+...+..+..+.. .+...+.++|++||.
T Consensus       171 --~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~  248 (302)
T TIGR00817       171 --KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL  248 (302)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence              24788899999999999888888766554332111 000    0111123223333332222 333445789999999


Q ss_pred             hHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          236 TYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       236 ~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      +.++.+++||++++++|++++||+++..+++|.++++.|...+
T Consensus       249 t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998643

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=6.7e-35  Score=260.25  Aligned_cols=273  Identities=14%  Similarity=0.185  Sum_probs=224.3

Q ss_pred             eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCc--HHhhhHHHHHHHHHHHHHHHhhhhhcccchhh
Q 023593            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLT--WRLIKVWLPVNVIFVGMLITSMFSLKYINVAM   79 (280)
Q Consensus         2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~   79 (280)
                      ++.||++++  .+|+|++++++|+.+++++..+.+..+.++.++++  +++++++++.|+++.......+.|++++++++
T Consensus        65 ~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~  142 (350)
T PTZ00343         65 VVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSF  142 (350)
T ss_pred             HHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence            357999999  57889999999999998776665554444444443  45799999999999877777889999999999


Q ss_pred             hHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 023593           80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ  159 (280)
Q Consensus        80 ~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~  159 (280)
                      +++++++.|+++++++++++|||++++++++++++++|+.+.+.+|.++++.|++++++|++++|+|+++.||.+++.++
T Consensus       143 ~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~  222 (350)
T PTZ00343        143 THVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSE  222 (350)
T ss_pred             HHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999999999999999988888888899999999999999999999998875321


Q ss_pred             cccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchh--hhh-hc----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023593          160 VTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVD--YLS-RT----PLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT  232 (280)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                        .+++.++.++..++...+.++.+|.....|+..  ... ..    +.+.....+..++.+++..+..|...|.+++++
T Consensus       223 --~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~  300 (350)
T PTZ00343        223 --IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKV  300 (350)
T ss_pred             --ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence              112466777777778888888888776554321  111 10    111112234455667777777888888999999


Q ss_pred             ChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       233 s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ||.+.++.+++||++++++|+++|||++|..+++|.++++.|.+++
T Consensus       301 s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        301 NQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             chhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=9.4e-33  Score=238.42  Aligned_cols=271  Identities=18%  Similarity=0.355  Sum_probs=234.7

Q ss_pred             eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcH-HhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593            2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTW-RLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (280)
                      .+.||++++.++||+|++++..|.+.+.+.....+..+..+.++.+. ..++..+++|+++++..+++|.|++++|++++
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~  112 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFY  112 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHH
Confidence            47899999999999999999999999988888887777666655544 46999999999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      +++|++.|+++.++++++.+|++++..+.+++.+..|+.+.+..|.++|+.|+..++++.+..++++++.|+.+++.   
T Consensus       113 q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~---  189 (316)
T KOG1441|consen  113 QTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSK---  189 (316)
T ss_pred             HHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998632   


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHH-HHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGV-LLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~  239 (280)
                        +++.|+.+.++|+...+...++ |.....++...........+..++.. .+..++++..|...|.++.++||.+.++
T Consensus       190 --~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sv~~f~~Nls~f~~ig~tSalT~~V  266 (316)
T KOG1441|consen  190 --GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-LLNSVLAFLLNLSAFLVIGRTSALTYSV  266 (316)
T ss_pred             --ccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-HHHHHHHHHHHHHHHHHHcccCchhhhh
Confidence              3579999999999999998888 76655443222100111122233333 4444899999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      .++.|.++.+..|+++|+|+.|+.+..|.++++.|..+|
T Consensus       267 ~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y  305 (316)
T KOG1441|consen  267 AGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY  305 (316)
T ss_pred             hccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999998765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=2.8e-28  Score=214.08  Aligned_cols=254  Identities=19%  Similarity=0.195  Sum_probs=214.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHH
Q 023593           15 DAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG   94 (280)
Q Consensus        15 ~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~   94 (280)
                      ++|.++++.|+.++.+.........+  .++.+++.++++++.++++.+...++|.|++|+|.|+++++|++.|++++++
T Consensus        30 ~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   30 PFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            37999999999999988877554333  1222445688999999999999999999999999999999999999999999


Q ss_pred             HHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc----cc------hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q 023593           95 EMYLFNKRHDNRVWAALFLMIISAISGGITDLS----FH------AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSG  164 (280)
Q Consensus        95 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~~------~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~  164 (280)
                      +++++|||+++++++++++.++|+++...+|.+    .+      ..|+++.+++.+++|...++++|..++.       
T Consensus       108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-------  180 (303)
T PF08449_consen  108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY-------  180 (303)
T ss_pred             HHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence            999999999999999999999999998665421    11      2399999999999999999999998865       


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHH--hcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhh
Q 023593          165 NLNEFSMVLLNNSLSLPLGVLLVIV--FNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGS  242 (280)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~  242 (280)
                      +.+++++++|+|..+.+...+....  .+|..+..++.. .++..+..++..++.+...+...+.+.++.||++.+++..
T Consensus       181 ~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t  259 (303)
T PF08449_consen  181 GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTT  259 (303)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHH
Confidence            4678999999999999998887777  666655433221 2344566667777777777777788999999999999999


Q ss_pred             hhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          243 LNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       243 l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ++++.++++++++||+++++.+|.|+++++.|+..+
T Consensus       260 ~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~  295 (303)
T PF08449_consen  260 LRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY  295 (303)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence            999999999999999999999999999999998654

; GO: 0055085 transmembrane transport

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.96  E-value=7.7e-29  Score=198.41  Aligned_cols=265  Identities=31%  Similarity=0.561  Sum_probs=230.0

Q ss_pred             CeeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593            1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         1 ~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (280)
                      |.+.||++++..+|+-...+.+.|..++.+-+.+.++.|..+.|   ..+.|.++|++++...+.+.+..++||+++|.+
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhcccceeeeeeeHH
Confidence            56789999999999877888999999998888877766554443   456899999999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc--------cchhhHHHHHHHHHHHHHHHHHHHH
Q 023593           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS--------FHAVGYAWQIINCFLTASYSLTLRR  152 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~~~~~~~~a~~~i~~~~  152 (280)
                      ++.++++.+.++..+..++|.|.+..+..+-++.++......++|.+        .| .|++|+..++++.|++....||
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~mrk  176 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLIMRK  176 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999888862        34 7999999999999999999999


Q ss_pred             HhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023593          153 VMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT  232 (280)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      ..+-+       |....+-++|+|+.+.|+++.+....|||++.- ......+.....++.+|+.++.+.|..-+|+|.+
T Consensus       177 ri~lt-------Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n-~annl~~d~l~am~ISgl~svgiSy~saWcvrVt  248 (309)
T COG5070         177 RIKLT-------NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN-LANNLSVDSLMAMFISGLCSVGISYCSAWCVRVT  248 (309)
T ss_pred             hhccc-------ccchhhHHHHhhhHHHHHHHHHHHHhccCCcch-hhcCCChHHHHHHHHHHHHHhhhhhccceeEeeh
Confidence            76643       356678899999999999999999999987531 1111112225677889999999999998999999


Q ss_pred             ChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       233 s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      |++++++++.+++......|.++|||+.+...+..+.+...+|..
T Consensus       249 SSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             hhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998877754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=1.5e-26  Score=206.09  Aligned_cols=262  Identities=13%  Similarity=0.150  Sum_probs=194.0

Q ss_pred             eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcC--ccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLG--VISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (280)
                      ...|.+++ .+.+ |..+.++|+.++.+++......+  ..+.++.++++++.+...|++......+.+++++|++++.+
T Consensus        30 ~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~a  107 (358)
T PLN00411         30 TLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLA  107 (358)
T ss_pred             HHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            35688876 4787 88899999999987776543221  12334445778888888888776666788999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHH------hCcccCHHHHHHHHHHHHHHHHHhcC-cc-----------------------ccc-
Q 023593           81 TVLKNVTNVITAVGEMYL------FNKRHDNRVWAALFLMIISAISGGIT-DL-----------------------SFH-  129 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~------l~e~~~~~~~~~~~l~~~Gv~l~~~~-~~-----------------------~~~-  129 (280)
                      .++.++.|++++++++++      +|||++++++.+++++++|+.+.... +.                       ..+ 
T Consensus       108 sll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (358)
T PLN00411        108 SAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW  187 (358)
T ss_pred             HHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccH
Confidence            999999999999999999      69999999999999999999976531 11                       012 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHH
Q 023593          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWL  209 (280)
Q Consensus       130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (280)
                      ..|..+.+.+++++|+|++..||..++.+        +......++...+.....+.....++.+. .......+.. ..
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~--------~~~~~t~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~-~~  257 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSEYP--------AAFTVSFLYTVCVSIVTSMIGLVVEKNNP-SVWIIHFDIT-LI  257 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------cHhHHHHHHHHHHHHHHHHHHHHHccCCc-ccceeccchH-HH
Confidence            34999999999999999999999876432        22344455554444444333333332110 0000111223 23


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          210 VMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       210 ~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      .+++.++.+ .+.|..| +++|+.+|.+.++..+++|++++++|++++||++++.+++|.++++.|..+
T Consensus       258 ~i~y~~i~t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l  325 (358)
T PLN00411        258 TIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA  325 (358)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            466667654 4566654 799999999999999999999999999999999999999999999999643

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=5.4e-26  Score=198.64  Aligned_cols=253  Identities=11%  Similarity=-0.005  Sum_probs=199.0

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHH-HHHHHHhhhhh-cccchhhhH
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSL-KYINVAMVT   81 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~~~~~~~~   81 (280)
                      ..|+..+  +.+ |..+++.|+.++.+++.+....++.+  ..++|++++....|.+. .....+.+++. +++|++.++
T Consensus        26 ~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~  100 (292)
T PRK11272         26 VIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAA  100 (292)
T ss_pred             HHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence            4577766  677 99999999999987766543332222  22467788887888765 45667778888 999999999


Q ss_pred             HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-DLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      ++.++.|+++++++++ +|||++++++.+++++++|+.+...+ +.+.+..|..+++.+++++|.|+++.||..+     
T Consensus       101 ~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~-----  174 (292)
T PRK11272        101 VVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPL-----  174 (292)
T ss_pred             HHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence            9999999999999986 69999999999999999999987543 3345567999999999999999999999632     


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~  239 (280)
                          + ++.....++...+.+...+.....++...     ...+...|..+++.++++..+.+..+ +++|+.++.+.+.
T Consensus       175 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        175 ----P-VGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             ----C-cchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence                1 23445567777777766665543332111     11133447778888999888888775 6899999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +.+++|+.+.++|++++||+++..+++|.++++.|.++
T Consensus       245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~  282 (292)
T PRK11272        245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVL  282 (292)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998753

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=9.3e-26  Score=193.80  Aligned_cols=251  Identities=13%  Similarity=0.060  Sum_probs=198.0

Q ss_pred             eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhH
Q 023593            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVT   81 (280)
Q Consensus         3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~   81 (280)
                      ...|+.+++ ..| |..+.+.|+..+.+.+....+.+      .++++++..+..+.+ ..+...+.++|++|+|++..+
T Consensus         6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~   77 (260)
T TIGR00950         6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA   77 (260)
T ss_pred             HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence            356888774 455 89999999998887766544332      134556666666654 577888999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      ++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|+.++++++++++.+.++.||..++.   
T Consensus        78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~---  154 (260)
T TIGR00950        78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKE---  154 (260)
T ss_pred             HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC---
Confidence            99999999999999999999999999999999999998875443 34556899999999999999999999986521   


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~  239 (280)
                          +.++.....+.+..+.+...+.....++...      . +...|..+++.++++..+.+..+ +++|+.++.+.+.
T Consensus       155 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       155 ----GPELLQFTGWVLLLGALLLLPFAWFLGPNPQ------A-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHHhcCCCCC------c-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence                1223333335667777777666554433211      1 22336667778888888888765 6899999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                      +.+++|+++.+++++++||+++..+++|..+++.|.
T Consensus       224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999885

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=8.4e-29  Score=203.78  Aligned_cols=271  Identities=22%  Similarity=0.315  Sum_probs=237.7

Q ss_pred             CeeeehhHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHc-----CccccC--cCcHHhhhHHHHHHHHHHHHHHHhhhh
Q 023593            1 MILVNKFVLSG--YNFDAGISLMVYQNFISVVTVTILSFL-----GVISTE--PLTWRLIKVWLPVNVIFVGMLITSMFS   71 (280)
Q Consensus         1 ~~~~nK~~l~~--~~f~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a   71 (280)
                      ++|.||++++.  ...+.|.++++.|......+.....+.     +..+.+  +++.+..++.+|+++.+.++..++|++
T Consensus        43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc  122 (347)
T KOG1442|consen   43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC  122 (347)
T ss_pred             hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence            46899999996  344579999999999887666554322     112222  356678999999999999999999999


Q ss_pred             hcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc---cccchhhHHHHHHHHHHHHHHHH
Q 023593           72 LKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSL  148 (280)
Q Consensus        72 l~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~~~~~~~~a~~~i  148 (280)
                      |+|++++++.+-|+++.+|+.+++++++|+|-+.....++.+++.|-.+..-+|   ...++.|.++++.++++-|+..+
T Consensus       123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnai  202 (347)
T KOG1442|consen  123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAI  202 (347)
T ss_pred             hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998887776555   46778999999999999999999


Q ss_pred             HHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 023593          149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWF  228 (280)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (280)
                      ++||.+..++       -.-|...+|+|..+..+.+|.....||.+.+..+|+..+..+|..+.++|++++.++|...+=
T Consensus       203 ytkk~l~~v~-------~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~Q  275 (347)
T KOG1442|consen  203 YTKKVLPPVG-------DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQ  275 (347)
T ss_pred             hhheeccccc-------CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEE
Confidence            9999877543       245888999999999999999999999998888888777889999999999999999988888


Q ss_pred             HhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       229 ~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      +|.+||.|+.+-+..|.+.+.+++..+++|.-+..-|-|-++++.|+.+|
T Consensus       276 IK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~Y  325 (347)
T KOG1442|consen  276 IKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAY  325 (347)
T ss_pred             EEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHH
Confidence            99999999999999999999999999999999999999999999998775

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=8.4e-25  Score=191.73  Aligned_cols=257  Identities=11%  Similarity=0.107  Sum_probs=188.2

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHH-HHHHHHhhhhhcc-cchhhhH
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSLKY-INVAMVT   81 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~-~~~~~~~   81 (280)
                      ..|..++  +++ |..+.++|+.++.+.+....+  +   ++.+   ++..+..+++. ..+..+.+.+++| .|++.+.
T Consensus        22 ~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~--~---~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~   90 (299)
T PRK11453         22 VIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVA--R---PKVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS   90 (299)
T ss_pred             HHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhc--C---CCCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence            4688777  688 999999999987655543321  1   1112   33444555543 3455566778888 6889999


Q ss_pred             HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc---cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023593           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK  158 (280)
Q Consensus        82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~  158 (280)
                      ++.++.|+++.+++++++|||++++++.+++++++|+.+...++   .+.+..|+.+++.+++++|.|+++.||..++.+
T Consensus        91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~  170 (299)
T PRK11453         91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHST  170 (299)
T ss_pred             HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            99999999999999999999999999999999999999876432   233457999999999999999999999754211


Q ss_pred             ccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhH
Q 023593          159 QVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTY  237 (280)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~  237 (280)
                            ..+......++...+...........++..+........++..|..+++.++++..++|..+ ..+++.+|.+.
T Consensus       171 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~  244 (299)
T PRK11453        171 ------RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRV  244 (299)
T ss_pred             ------ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence                  11223334444444433333222223322211110011234458888999999999999886 68999999999


Q ss_pred             hHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          238 SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       238 s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +.+..++|+.+.++|++++||+++..+++|.++++.|..+
T Consensus       245 s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l  284 (299)
T PRK11453        245 APLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI  284 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988743

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.94  E-value=5.3e-25  Score=192.64  Aligned_cols=246  Identities=11%  Similarity=0.053  Sum_probs=178.7

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhc----ccchhh
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLK----YINVAM   79 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~~~~~~   79 (280)
                      .+|..++  ++| |..+.+.|+..+.+++....+  +   ++.++++++.....++.+.....+.+.+++    +.++..
T Consensus        22 ~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~   93 (295)
T PRK11689         22 LIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIE   93 (295)
T ss_pred             HHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchH
Confidence            4788887  688 999999999999877765421  1   111222334444444445566666666665    467788


Q ss_pred             hHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc-----------cchhhHHHHHHHHHHHHHHHH
Q 023593           80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS-----------FHAVGYAWQIINCFLTASYSL  148 (280)
Q Consensus        80 ~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------~~~~G~~~~~~~~~~~a~~~i  148 (280)
                      +.++.++.|+++++++++++|||++++++.+++++++|+.++..++.+           .+..|+.+++.+++++|.|++
T Consensus        94 a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v  173 (295)
T PRK11689         94 VGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCN  173 (295)
T ss_pred             HHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999987654321           234699999999999999999


Q ss_pred             HHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-H
Q 023593          149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-W  227 (280)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  227 (280)
                      +.||..++         .++...  +... +...+.+.....++..      ...++..|..+++.++ +..+.|..+ +
T Consensus       174 ~~k~~~~~---------~~~~~~--~~~~-~~~~l~~~~~~~~~~~------~~~~~~~~~~l~~~~~-~t~~~~~l~~~  234 (295)
T PRK11689        174 VTRKYARG---------KNGITL--FFIL-TALALWIKYFLSPQPA------MVFSLPAIIKLLLAAA-AMGFGYAAWNV  234 (295)
T ss_pred             HHhhccCC---------CCchhH--HHHH-HHHHHHHHHHHhcCcc------ccCCHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            99997442         344432  2222 2222222222222211      1112334656667674 566667664 7


Q ss_pred             HHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          228 FLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       228 ~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ++|+.+|.+.+...+++|++++++|++++||+++..+++|.++++.|..
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~  283 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL  283 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence            8999999999999999999999999999999999999999999999863

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.94  E-value=6.6e-24  Score=185.51  Aligned_cols=244  Identities=12%  Similarity=0.021  Sum_probs=188.6

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL   83 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l   83 (280)
                      ..|++++  +++ |..+.++|+.++.+++....+.++   ++.++|++++.+..|.+......+.+++++|+|++.++++
T Consensus        30 ~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l  103 (293)
T PRK10532         30 LAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVAL  103 (293)
T ss_pred             HHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence            4688887  577 899999999999877765432221   2345778888888888888888889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC--c-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT--D-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        84 ~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      ..+.|+++++++    +||+++.  ..+.++++|+.++...  | .+.+..|..+++.+++++|.|.+..||..++    
T Consensus       104 ~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~----  173 (293)
T PRK10532        104 EFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE----  173 (293)
T ss_pred             HHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence            999999999877    4666554  4466788999876432  2 2345679999999999999999999998542    


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~  239 (280)
                           .++..+ .++...+...+.+.....++ ..      ..++..|...++.|++++.++|.. ++.+++.+|.+.+.
T Consensus       174 -----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~------~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~  240 (293)
T PRK10532        174 -----HGPATV-AIGSLIAALIFVPIGALQAG-EA------LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT  240 (293)
T ss_pred             -----CCchHH-HHHHHHHHHHHHHHHHHccC-cc------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence                 345544 34555555555555443322 10      112334555678899999999977 47899999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..+++|+++.++|++++||+++..+++|.++++.|.+
T Consensus       241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~  277 (293)
T PRK10532        241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASM  277 (293)
T ss_pred             HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998864

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.93  E-value=5.4e-23  Score=180.03  Aligned_cols=249  Identities=11%  Similarity=0.065  Sum_probs=171.0

Q ss_pred             ehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHc-Cc-cccC-cC-cHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593            5 NKFVLSGYNFDAGISLMVYQNFISVVTVTILSFL-GV-ISTE-PL-TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         5 nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~   80 (280)
                      .|+. .  +.+ |..+.++|..++.+++...... +. .+.+ +. +++++......+.....++.+.++|++++|++.+
T Consensus        27 ~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a  102 (296)
T PRK15430         27 FKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA  102 (296)
T ss_pred             HHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence            3653 3  577 9999999999988755443221 21 1110 11 2333333333345567789999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      +++.++.|+++++++++++|||+++++|.+++++++|+.++..++.+.    ..+++.+++++|.|.++.||..++    
T Consensus       103 ~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~----  174 (296)
T PRK15430        103 SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVE----  174 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCC----
Confidence            999999999999999999999999999999999999999876433222    256888999999999998886321    


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL  239 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~  239 (280)
                         ...+......+....+.+...+   ..++...  . ....+...+..+...|+. ..+.+.. +..+|+.+|.+.+.
T Consensus       175 ---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~~~g~~-t~i~~~~~~~a~~~~~a~~~s~  244 (296)
T PRK15430        175 ---AQTGMLIETMWLLPVAAIYLFA---IADSSTS--H-MGQNPMSLNLLLIAAGIV-TTVPLLCFTAAATRLRLSTLGF  244 (296)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHH---HccCCcc--c-ccCCcHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCHHHHHH
Confidence               1112222233333333322211   1111100  0 001111223344444554 4455555 47899999999999


Q ss_pred             HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593          240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                      ..+++|+++.++|++++||++++.+++|.++++.|.
T Consensus       245 ~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~  280 (296)
T PRK15430        245 FQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVAL  280 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999997764

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.92  E-value=7.2e-24  Score=177.46  Aligned_cols=270  Identities=14%  Similarity=0.179  Sum_probs=221.1

Q ss_pred             eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccc----cCcCcHH-hhhHHHHHHHHHHHHHHHhhhhhcccch
Q 023593            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVIS----TEPLTWR-LIKVWLPVNVIFVGMLITSMFSLKYINV   77 (280)
Q Consensus         3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~   77 (280)
                      +.+|+.-.  .|++|.+++.+|+.+-.++....++..+++    ..+.+|+ ..|+..|.+++.+.+..++|+|++|++.
T Consensus        33 f~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtl  110 (349)
T KOG1443|consen   33 FYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTL  110 (349)
T ss_pred             HHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeee
Confidence            45677554  578899999999998887776655432222    2345674 5888999999999999999999999999


Q ss_pred             hhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023593           78 AMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTA  157 (280)
Q Consensus        78 ~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~  157 (280)
                      +.|++.|+.+++|+.+++.++.=||++|.-.+.+.++..|+.+.++.+.+++..|+.+...++++.++...++|+++++.
T Consensus       111 SlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~  190 (349)
T KOG1443|consen  111 SLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ  190 (349)
T ss_pred             eeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcC
Confidence            99999999999999999999989999999999999999999999999999999999999999999999999999999864


Q ss_pred             hccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhc-----CCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 023593          158 KQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRT-----PLLRL-PSFWLVMTLSGFLGLAISFTSMWFLHQ  231 (280)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      +    ..+-+|.+..++........++|.....|++......     .+..+ ......+.+.|.+++......+..+.+
T Consensus       191 ~----~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~  266 (349)
T KOG1443|consen  191 P----SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSR  266 (349)
T ss_pred             c----cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeee
Confidence            4    2345677777777766677777777766655432211     11111 122345566777888888888889999


Q ss_pred             cChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          232 TGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       232 ~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ++..+.++.+..|.+.+.++|....+|+++..+|.|..+++.|.+.+
T Consensus       267 Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  267 TSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             ccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=1.7e-21  Score=169.40  Aligned_cols=245  Identities=13%  Similarity=0.134  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHHHHHHcC--ccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHH
Q 023593           21 MVYQNFISVVTVTILSFLG--VISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYL   98 (280)
Q Consensus        21 ~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~   98 (280)
                      .+.+.....+.+......+  ..+.++.+++.++.....+........+.++++++.|++..+.+.++.|++++++++++
T Consensus        31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~  110 (281)
T TIGR03340        31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT  110 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence            4555555554443332211  22223323344444444455667788899999999999999999999999999999999


Q ss_pred             hCcccCHHHHHHHHHHHHHHHHHhcCcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHH
Q 023593           99 FNKRHDNRVWAALFLMIISAISGGITDL-SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS  177 (280)
Q Consensus        99 l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (280)
                      +|||+++++|.++.+++.|+.++..++. +.+..|..+++.++++++.|.+..||..++.+     ...+......++..
T Consensus       111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~  185 (281)
T TIGR03340       111 LGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-----AFYSALGYLGIGFL  185 (281)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh-----cccccHHHHHHHHH
Confidence            9999999999999999999998765432 34457888999999999999998887633211     01112222222222


Q ss_pred             HH-HHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHh
Q 023593          178 LS-LPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILL  255 (280)
Q Consensus       178 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~  255 (280)
                      .. .+.... ....++. ...  +  .+.. +...++.+.+...+.|..+ +++++.++.+.+...+++|+++.++|+++
T Consensus       186 ~~~~~~~~~-~~~~~~~-~~~--~--~~~~-~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~  258 (281)
T TIGR03340       186 AMGWPFLLL-YLKRHGR-SMF--P--YARQ-ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF  258 (281)
T ss_pred             HHHHHHHHH-HHHHhcc-chh--h--hHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH
Confidence            21 222111 1111111 100  0  1112 3344566666677777654 78999999999999999999999999999


Q ss_pred             ccccCcccchhhhHHhhhhhcc
Q 023593          256 FKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       256 f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +||+++..+++|.++++.|..+
T Consensus       259 lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       259 LNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999753

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.88  E-value=7e-22  Score=159.81  Aligned_cols=252  Identities=14%  Similarity=0.113  Sum_probs=207.8

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHH
Q 023593           13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA   92 (280)
Q Consensus        13 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~   92 (280)
                      .|.+...+.+.|+.+..+..-+....+  +..++++-.-+.+..++.-+.+..+.+|.|+||+|.|+..+-+++.|+.++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM  126 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM  126 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence            466788899999998888776543222  223344444678888899999999999999999999999999999999999


Q ss_pred             HHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCC
Q 023593           93 VGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN  165 (280)
Q Consensus        93 i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~  165 (280)
                      +++..+.|++.+|++++.++++..|+++..+.+.       +-...|=++.++|.....+....++|.-+..       .
T Consensus       127 ilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-------q  199 (337)
T KOG1580|consen  127 ILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-------Q  199 (337)
T ss_pred             eeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-------c
Confidence            9999999999999999999999999999876532       1123688889999999999888888874432       2


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhh
Q 023593          166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK  245 (280)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~  245 (280)
                      -+.-++++|.|+-+...+....+++||......+.+ +.|..|.-+...++.++..+.+.|..+...+|++-|++...++
T Consensus       200 ~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~-RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRK  278 (337)
T KOG1580|consen  200 RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQ-RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRK  278 (337)
T ss_pred             cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHH-hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHH
Confidence            355678999999988888777778898766554332 3445566666678888888998999999999999999999999


Q ss_pred             HHHHHHHHHhccccCcccchhhhHHhhhh
Q 023593          246 IPLSVAGILLFKVPTSLENSASIFFGKLA  274 (280)
Q Consensus       246 v~~~~~~~~~f~e~~~~~~~~G~~l~~~g  274 (280)
                      .++++.++++|+++++.+||+|.++++.|
T Consensus       279 fFTil~SVllf~npls~rQwlgtvlVF~a  307 (337)
T KOG1580|consen  279 FFTILISVLLFNNPLSGRQWLGTVLVFSA  307 (337)
T ss_pred             HHHHHHHHHHhcCcCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999987

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.87  E-value=7.3e-20  Score=160.34  Aligned_cols=253  Identities=10%  Similarity=0.068  Sum_probs=189.0

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHH--HcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHH
Q 023593           13 NFDAGISLMVYQNFISVVTVTILS--FLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVI   90 (280)
Q Consensus        13 ~f~~p~~l~~~r~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~   90 (280)
                      +.+.|.+-++..+..-.++.....  +.+..+..+..++++++++.++++-...+++.+.|++|++++.++++.++..++
T Consensus        39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~  118 (334)
T PF06027_consen   39 GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPF  118 (334)
T ss_pred             CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHH
Confidence            677788888777766555443322  222222223334668888889999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc---------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593           91 TAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT  161 (280)
Q Consensus        91 v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~  161 (280)
                      +++++++++|+|+++.+++|+++.++|+.++...|.         +....|+++++.+++.||+++++.|+..++     
T Consensus       119 ~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~-----  193 (334)
T PF06027_consen  119 VMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKK-----  193 (334)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence            999999999999999999999999999998766542         123689999999999999999999998763     


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHH
Q 023593          162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLV  240 (280)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~  240 (280)
                          .+..+......+.+.++..+..... |.+.+.+. +|. +..+..++.-+ .+....|... ..++..||+..++-
T Consensus       194 ----~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~-~w~-~~~~~~~v~~~-~~lf~~y~l~p~~l~~ssAt~~nLs  265 (334)
T PF06027_consen  194 ----APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI-HWT-SQVIGLLVGYA-LCLFLFYSLVPIVLRMSSATFFNLS  265 (334)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc-CCC-hhhHHHHHHHH-HHHHHHHHHHHHHHHhCccceeehH
Confidence                4556666666666666666554443 33333222 222 22233222222 2233344433 56889999988887


Q ss_pred             hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       241 ~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      .....+.+++.++.+||+++++..++|.++++.|-+.+
T Consensus       266 LLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy  303 (334)
T PF06027_consen  266 LLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY  303 (334)
T ss_pred             HHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence            77789999999999999999999999999999997654

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=99.87  E-value=1.6e-19  Score=154.83  Aligned_cols=228  Identities=11%  Similarity=0.127  Sum_probs=155.7

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHH-HcCcc-----ccCcCcHHh-hhHHHHHHHHHHHHHHHhhhhhcccc
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILS-FLGVI-----STEPLTWRL-IKVWLPVNVIFVGMLITSMFSLKYIN   76 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~-~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~   76 (280)
                      ..|+ ..  +.+ |..+.++|+.++.+++.+.. ..++.     +.++.++++ +......+++...++.+.++|+++++
T Consensus        20 ~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~   95 (256)
T TIGR00688        20 YSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGS   95 (256)
T ss_pred             HHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            3466 33  577 99999999999887755432 22211     111112222 33456667778889999999999999


Q ss_pred             hhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 023593           77 VAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDT  156 (280)
Q Consensus        77 ~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~  156 (280)
                      ++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+.+    .+++.+++++|.|.+..||..++
T Consensus        96 ~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~  171 (256)
T TIGR00688        96 SLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT  171 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC
Confidence            99999999999999999999999999999999999999999987754322211    45788999999999999996331


Q ss_pred             hhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChh
Q 023593          157 AKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGAT  235 (280)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~  235 (280)
                                +..+... ......|...+.... +++...   +.......|..+++.|+. ..+.|.. ..+.|+.+|.
T Consensus       172 ----------~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~  235 (256)
T TIGR00688       172 ----------DLAGFCL-ETLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLN  235 (256)
T ss_pred             ----------CcchHHH-HHHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChH
Confidence                      1122222 122233333222211 111110   001111135666677776 4556655 4789999999


Q ss_pred             hHhHHhhhhhHHHHHHHHHh
Q 023593          236 TYSLVGSLNKIPLSVAGILL  255 (280)
Q Consensus       236 ~~s~~~~l~~v~~~~~~~~~  255 (280)
                      +.+...+++|+++.++|++.
T Consensus       236 ~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       236 LLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.87  E-value=2.4e-20  Score=156.48  Aligned_cols=256  Identities=11%  Similarity=0.089  Sum_probs=213.7

Q ss_pred             cCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHH
Q 023593           11 GYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVI   90 (280)
Q Consensus        11 ~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~   90 (280)
                      +..|..|.++.++|-..+.++........+.+.+  ..+.++++..+++.....-.+++.||+|+|-|+.++.+++.-+.
T Consensus        45 ~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~--~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP  122 (327)
T KOG1581|consen   45 GERFEHSLFLVFCQRLVALLVSYAMLKWWKKELS--GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP  122 (327)
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcccccCC--CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence            3467779999999999999999776544333322  34568899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC---cc------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593           91 TAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT---DL------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT  161 (280)
Q Consensus        91 v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~  161 (280)
                      +++++.++.|+|+++.+++...++..|+.+....   |.      ..++.|+.++..+....++-+..++++.++.    
T Consensus       123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~----  198 (327)
T KOG1581|consen  123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY----  198 (327)
T ss_pred             HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC----
Confidence            9999999999999999999999999999876543   20      2346899999999999999999999998853    


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHh
Q 023593          162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVG  241 (280)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~  241 (280)
                         +.++++++++.|+.+.+......+..+.+.+...+- ..+|+++.=+++.+..+...+.+.+.-+++.+|.+...+.
T Consensus       199 ---k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~-~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~  274 (327)
T KOG1581|consen  199 ---KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFI-KEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIM  274 (327)
T ss_pred             ---CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHH-HcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHH
Confidence               689999999999999988877765555554433221 1234555555555777788888888999999999999999


Q ss_pred             hhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          242 SLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       242 ~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..|+.+++.++.++||++.++.|+.|+.+++.|..
T Consensus       275 ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~  309 (327)
T KOG1581|consen  275 TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF  309 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence            99999999999999999999999999999988753

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.1e-20  Score=155.86  Aligned_cols=262  Identities=16%  Similarity=0.090  Sum_probs=210.0

Q ss_pred             hhHHhcCCCC-hhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh
Q 023593            6 KFVLSGYNFD-AGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK   84 (280)
Q Consensus         6 K~~l~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~   84 (280)
                      .++++..+|+ +.|.+++.|+.+...+..+....-..+.+.   ..||.+..++.+..+...++|.|+.|+|.|+..+.+
T Consensus        63 Elif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFK  139 (367)
T KOG1582|consen   63 ELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFK  139 (367)
T ss_pred             HHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhhHhhhhhccccCcCccccccCcHHHHHH
Confidence            3456666776 889999999998876666532211111122   238888999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc----cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593           85 NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD----LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV  160 (280)
Q Consensus        85 ~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~  160 (280)
                      +|..+.+++.+.++.++|..+.++.+..+..+|.++....|    +++|..|++..-.+.++.|+-...++|.++..+  
T Consensus       140 ccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~--  217 (367)
T KOG1582|consen  140 CCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP--  217 (367)
T ss_pred             hhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC--
Confidence            99999999999999999999999999999999999987665    467889999999999999999999999988543  


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHH
Q 023593          161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV  240 (280)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~  240 (280)
                           .+..++++|+..++.|.+......+||....+.+...++.......++-+..++....+....+|..++.++..+
T Consensus       218 -----~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatv  292 (367)
T KOG1582|consen  218 -----ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATV  292 (367)
T ss_pred             -----CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHH
Confidence                 466888999999999988877778888766554432223323333333344445444445567999999999999


Q ss_pred             hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       241 ~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +..++.+++++++++|.+++|.+..-|..+++.|..+
T Consensus       293 TTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~L  329 (367)
T KOG1582|consen  293 TTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYL  329 (367)
T ss_pred             HHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHh
Confidence            9999999999999999999998888888888888653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.84  E-value=4.2e-18  Score=147.90  Aligned_cols=242  Identities=16%  Similarity=0.200  Sum_probs=174.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHH
Q 023593           17 GISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEM   96 (280)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~   96 (280)
                      +......|...+.+........++.+..+..++.++..+..++.......+.+.++++++++.++.+.++.|+++.++++
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            45566668888887743333222111111111222344444455677888999999999999999999999999999997


Q ss_pred             -HHhCcccCHHHHHHHHHHHHHHHHHhcCcccc---chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHH
Q 023593           97 -YLFNKRHDNRVWAALFLMIISAISGGITDLSF---HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV  172 (280)
Q Consensus        97 -~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~  172 (280)
                       +++|||++++++.++++.+.|+.++..++...   +..|..+++.+++++|++.+..|+.. +         .++....
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~---------~~~~~~~  185 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R---------LGPVTLA  185 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------CChHHHH
Confidence             66799999999999999999999987765433   25899999999999999999999975 2         3444444


Q ss_pred             H-HHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhHHhhhhhHHHHH
Q 023593          173 L-LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSLVGSLNKIPLSV  250 (280)
Q Consensus       173 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~  250 (280)
                      . ++.. ... .........+..      ...+...+..+.+.|+.+..+.+.. +...++.++...+....++|+.+.+
T Consensus       186 ~~~~~~-~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  257 (292)
T COG0697         186 LLLQLL-LAL-LLLLLFFLSGFG------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAAL  257 (292)
T ss_pred             HHHHHH-HHH-HHHHHHHhcccc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            4 3322 111 111111111111      1112233666777788888766665 4689999999999999999999999


Q ss_pred             HHHHhccccCcccchhhhHHhhhhhc
Q 023593          251 AGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       251 ~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ++++++||+++..+++|+.+++.|..
T Consensus       258 ~~~l~~~e~~~~~~~~G~~li~~g~~  283 (292)
T COG0697         258 LGVLLLGEPLSPAQLLGAALVVLGVL  283 (292)
T ss_pred             HHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999888864

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.81  E-value=1.8e-17  Score=135.78  Aligned_cols=234  Identities=15%  Similarity=0.056  Sum_probs=186.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHH
Q 023593           17 GISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEM   96 (280)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~   96 (280)
                      |.-.+++|..++.+++....|.-+   ++.++++++.....|+....++.+++.|++++|.+.+..+.++-|+.+++++ 
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~-  115 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS-  115 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh-
Confidence            778899999999988877654322   4567888999999999999999999999999999999999999999988765 


Q ss_pred             HHhCcccCHHHHHHHHHHHHHHHHHhcC---ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHH
Q 023593           97 YLFNKRHDNRVWAALFLMIISAISGGIT---DLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL  173 (280)
Q Consensus        97 ~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  173 (280)
                         .+|.  ++..-+.+++.|+.+..-.   ..+.|..|..+++.+..+|+.|-+.-||.-+.         .+.-+-+.
T Consensus       116 ---sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~---------~~g~~g~a  181 (292)
T COG5006         116 ---SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA---------EHGTAGVA  181 (292)
T ss_pred             ---ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc---------CCCchHHH
Confidence               3333  3445556677888766432   24678899999999999999999999998431         23333355


Q ss_pred             HHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhHHhhhhhHHHHHHH
Q 023593          174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSLVGSLNKIPLSVAG  252 (280)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~~~  252 (280)
                      +.+..+.+...|+.....+.       ...+++....-+..++++..+-|+. ..+.++.++.+.++...+||..+...|
T Consensus       182 ~gm~vAaviv~Pig~~~ag~-------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G  254 (292)
T COG5006         182 VGMLVAALIVLPIGAAQAGP-------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSG  254 (292)
T ss_pred             HHHHHHHHHHhhhhhhhcch-------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHH
Confidence            66666666666665433221       2234555555566799999999986 678999999999999999999999999


Q ss_pred             HHhccccCcccchhhhHHhhhhh
Q 023593          253 ILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       253 ~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                      ++++||++|..||+|++.++.++
T Consensus       255 ~i~L~e~ls~~qwlaI~~ViaAs  277 (292)
T COG5006         255 LIFLGETLTLIQWLAIAAVIAAS  277 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999998875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.79  E-value=2.9e-17  Score=139.07  Aligned_cols=211  Identities=17%  Similarity=0.246  Sum_probs=165.8

Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-
Q 023593           48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-  126 (280)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-  126 (280)
                      +|+..++...++++...+.+.+.++++++++++++++++..+++++++++++|+|.+++||.++++.++|+.+...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4566677777999999999999999999999999999999999999999999999999999999999999998743211 


Q ss_pred             --------c--------cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHh
Q 023593          127 --------S--------FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVF  190 (280)
Q Consensus       127 --------~--------~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (280)
                              +        ....|+...+.++++.++..++.+|.+|+.       +.+.+.........+.++..+.... 
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-------~~s~~~~N~qL~~~gi~~~~~~~~~-  165 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-------NVSLWIQNMQLYLFGILFNLLALLL-  165 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-------chhHHHHHHHHHHHHHHHHHHHHhc-
Confidence                    1        125799999999999999999999999853       2444444444445566655544332 


Q ss_pred             cchhhhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhh
Q 023593          191 NEVDYLSRTP--LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASI  268 (280)
Q Consensus       191 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~  268 (280)
                      .+.+...+..  +..++..|..+...++.|...++    .+|+.+...-.....+..+.+.+.++.+||.+++....+|.
T Consensus       166 ~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~  241 (244)
T PF04142_consen  166 SDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA  241 (244)
T ss_pred             ccccccccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence            3333222111  12234457777777777777665    78999999999999999999999999999999999999987


Q ss_pred             HH
Q 023593          269 FF  270 (280)
Q Consensus       269 ~l  270 (280)
                      .+
T Consensus       242 ~~  243 (244)
T PF04142_consen  242 AL  243 (244)
T ss_pred             ec
Confidence            65

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.78  E-value=9.8e-17  Score=139.89  Aligned_cols=236  Identities=14%  Similarity=0.139  Sum_probs=168.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHH-HcCccccCcCc-HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhh-hHHH
Q 023593           13 NFDAGISLMVYQNFISVVTVTILS-FLGVISTEPLT-WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKN-VTNV   89 (280)
Q Consensus        13 ~f~~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi   89 (280)
                      +++.++..   |..++.++..... ..+.   ++.+ ++.+..-+..|+.+...+.+.+.|.++++++.+..+.+ +.|+
T Consensus        25 g~~~~~~~---~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v   98 (290)
T TIGR00776        25 GGPYSQTL---GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLV   98 (290)
T ss_pred             CCHHHHHH---HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHH
Confidence            45534432   6666665554332 2221   1111 22233334445556777899999999999999999988 8888


Q ss_pred             HHHHHHHHHhCcccCHHH----HHHHHHHHHHHHHHhcCccc-------cc-hhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023593           90 ITAVGEMYLFNKRHDNRV----WAALFLMIISAISGGITDLS-------FH-AVGYAWQIINCFLTASYSLTLRRVMDTA  157 (280)
Q Consensus        90 ~v~i~~~~~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G~~~~~~~~~~~a~~~i~~~~~~~~~  157 (280)
                      +..+.+.+++|||.++++    +.+++++++|+.+....+.+       .+ .+|++++++++++++.|.+..|+.    
T Consensus        99 ~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----  174 (290)
T TIGR00776        99 GGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----  174 (290)
T ss_pred             HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc----
Confidence            999999999999999999    99999999999887553211       33 689999999999999999999986    


Q ss_pred             hccccCCCCChhHHHHHHHH----HHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHh-h
Q 023593          158 KQVTKSGNLNEFSMVLLNNS----LSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLH-Q  231 (280)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~  231 (280)
                             +.|+++..+.+..    .+.....+. ....++         .+...+..++ .|++ ..+.+..+ ...+ +
T Consensus       175 -------~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~  235 (290)
T TIGR00776       175 -------GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPL---------KKYAILLNIL-PGLM-WGIGNFFYLFSAQPK  235 (290)
T ss_pred             -------CCCcceehhHHHHHHHHHHHHHHHHH-hcccch---------HHHHHHHHHH-HHHH-HHHHHHHHHHHcccc
Confidence                   2466666444443    222222221 000111         1122244444 7888 57777665 5677 8


Q ss_pred             cChhhHhHHhhhhhHHHHHHHHHhccccCcccch----hhhHHhhhhhcc
Q 023593          232 TGATTYSLVGSLNKIPLSVAGILLFKVPTSLENS----ASIFFGKLALLN  277 (280)
Q Consensus       232 ~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~----~G~~l~~~g~~~  277 (280)
                      .++.+.++++.++|+.+++.+++++||+.+..|+    +|.++++.|.++
T Consensus       236 ~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       236 VGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999    999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.4e-18  Score=143.86  Aligned_cols=250  Identities=16%  Similarity=0.192  Sum_probs=194.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-HcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcc-cchhhhHHhhhhHHHHHHH
Q 023593           16 AGISLMVYQNFISVVTVTILS-FLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKY-INVAMVTVLKNVTNVITAV   93 (280)
Q Consensus        16 ~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~v~i   93 (280)
                      ....+++.|+.+...-..+.. ..+..+ ++++   .|.+...-..|+..++++|+++++ +|.|...++|+-+++.+++
T Consensus        32 sgNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   32 SGNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             CeeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            456889999987776665532 122222 3444   566667777888999999999999 9999999999999999999


Q ss_pred             HHHHHhCcccCHHHHHHHHHHHHHHHHHhcC---ccc------------cc----hhhHHHHHHHHHHHHHHHHHHHHHh
Q 023593           94 GEMYLFNKRHDNRVWAALFLMIISAISGGIT---DLS------------FH----AVGYAWQIINCFLTASYSLTLRRVM  154 (280)
Q Consensus        94 ~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~~------------~~----~~G~~~~~~~~~~~a~~~i~~~~~~  154 (280)
                      ++++++|+|.+.+|+.+++...+|+++.+..   |.+            .+    ..|+.+..++.+..|.-.+++++..
T Consensus       108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y  187 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY  187 (330)
T ss_pred             HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999876431   211            11    2699999999999999999999999


Q ss_pred             hhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhh----hc-----CC--CcchHHHHHHHHHHHHHHHHHH
Q 023593          155 DTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLS----RT-----PL--LRLPSFWLVMTLSGFLGLAISF  223 (280)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--~~~~~~~~~~~~~~~~~~~~~~  223 (280)
                      |+++       =++.+.++|+...+.|..+..   .+|..+.+    ..     |.  ..-|..|..++.+.+.-+...-
T Consensus       188 ~kyG-------Kh~~EalFytH~LsLP~Flf~---~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Cik  257 (330)
T KOG1583|consen  188 QKYG-------KHWKEALFYTHFLSLPLFLFM---GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIK  257 (330)
T ss_pred             HHhc-------CChHHHHHHHHHhccchHHHh---cchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHH
Confidence            9876       267788999999998877642   23332221    11     11  1234557777777766555444


Q ss_pred             HHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccCC
Q 023593          224 TSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGL  279 (280)
Q Consensus       224 ~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~~  279 (280)
                      ..+..-..+++++.+++-++++.++++++++.|++++|+..|+|..+++.|++|+-
T Consensus       258 gVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  258 GVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             hhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            44556667999999999999999999999999999999999999999999998763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.75  E-value=4.5e-17  Score=128.74  Aligned_cols=145  Identities=19%  Similarity=0.373  Sum_probs=125.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcC-----CCc-ch
Q 023593          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTP-----LLR-LP  205 (280)
Q Consensus       132 G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~  205 (280)
                      |+++++.+.++.|+++++.||.+++.+  .++++.++.++++|++..+.+.+.|.....|+++......     +.. ++
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~   78 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDP   78 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchH
Confidence            788999999999999999999988632  2245789999999999999999999888887765322111     111 44


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          206 SFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ..+..++.+|++++..++..+.+++++||.+.++.+++|.+..++.|+++|||++|..+++|+++++.|..+|
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            5678889999999999999999999999999999999999999999999999999999999999999999876

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.4e-14  Score=125.06  Aligned_cols=217  Identities=15%  Similarity=0.181  Sum_probs=169.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-----
Q 023593           50 LIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-----  124 (280)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~-----  124 (280)
                      +.......+++|..++...+.++.+.+++++++..++..+.|+++..+++|||.+++||.++++.++|+.+...+     
T Consensus        91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            444566668899998889999999999999999999999999999999999999999999999999999998621     


Q ss_pred             c------cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhh
Q 023593          125 D------LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSR  198 (280)
Q Consensus       125 ~------~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (280)
                      +      .+..+.|....+.++.+.++.++|.+|+++.       .+.+.|....-....+.++........ |.....+
T Consensus       171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~-------s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~  242 (345)
T KOG2234|consen  171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG-------SNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINE  242 (345)
T ss_pred             CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHHHHHhhc-ccccccc
Confidence            1      1233689999999999999999999999874       234544444433445555444433332 3332211


Q ss_pred             --cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          199 --TPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                        +-..++...|..++..++.|..++.    ..|+.+-..-.....+..+.+.+.++.+||.++|....+|+.+++.+..
T Consensus       243 ~gff~G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~  318 (345)
T KOG2234|consen  243 YGFFYGYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIF  318 (345)
T ss_pred             CCccccccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHH
Confidence              1122344568888889999888876    6777777777777777889999999999999999999999999999877


Q ss_pred             cC
Q 023593          277 NG  278 (280)
Q Consensus       277 ~~  278 (280)
                      +|
T Consensus       319 lY  320 (345)
T KOG2234|consen  319 LY  320 (345)
T ss_pred             Hh
Confidence            65

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.63  E-value=8.5e-15  Score=126.46  Aligned_cols=212  Identities=17%  Similarity=0.108  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc------
Q 023593           53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL------  126 (280)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~------  126 (280)
                      .-+..+.+.+..+++.|.||.+++++..+++.+++-+||..++.++..||+++.+.+++++.+.|++++..+|.      
T Consensus       161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~  240 (416)
T KOG2765|consen  161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL  240 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC
Confidence            33444445567788889999999999999999999999999999999999999999999999999999887743      


Q ss_pred             --ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHH---hcchhhhhhcCC
Q 023593          127 --SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIV---FNEVDYLSRTPL  201 (280)
Q Consensus       127 --~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  201 (280)
                        +-...|.++++++++.||.|.++.||-..+.+     .+.|--...-|..++...++.|....   +++..  ++.|.
T Consensus       241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg-----~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~--F~lP~  313 (416)
T KOG2765|consen  241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEG-----ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER--FELPS  313 (416)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhccccc-----ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc--ccCCC
Confidence              23368999999999999999999999765421     35554433334444444444432221   22211  22232


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhh
Q 023593          202 LRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA  274 (280)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g  274 (280)
                        +.. ...++..+..+.+++=..| ++.-.++|+...+-..+..+.+++...++=|.++++..++|...++.|
T Consensus       314 --~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~  384 (416)
T KOG2765|consen  314 --STQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVG  384 (416)
T ss_pred             --Cce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence              222 2344555666666654444 567789999999999999999999999988999999999999998877

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.62  E-value=7.5e-13  Score=111.48  Aligned_cols=244  Identities=13%  Similarity=0.170  Sum_probs=177.4

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHH-Hc-CccccCcC--cHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHH
Q 023593           13 NFDAGISLMVYQNFISVVTVTILS-FL-GVISTEPL--TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTN   88 (280)
Q Consensus        13 ~f~~p~~l~~~r~~~~~~~l~~~~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p   88 (280)
                      +.| +..+...|...+..+..... .. +..+..+.  ++|.+......++.-..++....+|..+-.+-.+++=....|
T Consensus        31 ~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InP  109 (293)
T COG2962          31 PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINP  109 (293)
T ss_pred             cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHH
Confidence            455 77888899887775554432 12 22222221  122333344445556678888999999988888889999999


Q ss_pred             HHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCCh
Q 023593           89 VITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE  168 (280)
Q Consensus        89 i~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~  168 (280)
                      ++..+++.+++|||+++.||+++.++.+||..-.....++++.++..    ++++++|...-|+.           +.|+
T Consensus       110 L~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK~~-----------~v~a  174 (293)
T COG2962         110 LVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRKKL-----------KVDA  174 (293)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHHhc-----------CCch
Confidence            99999999999999999999999999999998877776777666554    56788888765554           3566


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHH
Q 023593          169 FSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIP  247 (280)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~  247 (280)
                      .+-...-.+.-.|+...+....++..+...   ..+...+..++.+|.. +.+....| ..-|+.+=.+.++..+++|..
T Consensus       175 ~~g~~lE~l~l~p~al~yl~~l~~~~~~~~---~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl  250 (293)
T COG2962         175 LTGLTLETLLLLPVALIYLLFLADSGQFLQ---QNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTL  250 (293)
T ss_pred             HHhHHHHHHHHhHHHHHHHHHHhcCchhhh---cCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            665666666667777666655444332111   1123346667777776 44555555 578999999999999999999


Q ss_pred             HHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          248 LSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       248 ~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ...+++.++||+++..+....+.+..|-.
T Consensus       251 ~fllav~i~~E~~~~~~~~~F~~IW~aL~  279 (293)
T COG2962         251 MFLLAVLIFGEPFDSDQLVTFAFIWLALA  279 (293)
T ss_pred             HHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999888877643

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.57  E-value=5.9e-16  Score=127.84  Aligned_cols=206  Identities=11%  Similarity=0.056  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-----c----
Q 023593           55 LPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-----D----  125 (280)
Q Consensus        55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~-----~----  125 (280)
                      ..-|+.........+||++|+|.+.+.++..++|.+|.++++.++||+.++.+.++..+.+.||.++..+     |    
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g  180 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG  180 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence            3346776777888899999999999999999999999999999999999999999999999999987432     1    


Q ss_pred             --c---ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcC
Q 023593          126 --L---SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTP  200 (280)
Q Consensus       126 --~---~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (280)
                        .   +.+..|-..++.+++..|---+..|++-+         +.+....+-|...++.+...+.....++++-..   
T Consensus       181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk---------~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~---  248 (346)
T KOG4510|consen  181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK---------NAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH---  248 (346)
T ss_pred             cccccccccCCchHHHHHhHhhhhhHHHHHHHhhc---------cccEEEEehHHHHHHHHHHHHHHhhccceecCc---
Confidence              1   23456877788888877777777787633         445544445555555555555444445443211   


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593          201 LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                      ...+   |..++..|++|+..+......+..-.+...++..+.+-+++.+..+++|||.||+.+|.|+++++.+.
T Consensus       249 cgkd---r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~  320 (346)
T KOG4510|consen  249 CGKD---RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSST  320 (346)
T ss_pred             cccc---eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhH
Confidence            1223   44556679999999988887777777777788889999999999999999999999999999887654

>TIGR00803 nst UDP-galactose transporter

Probab=99.42  E-value=3.7e-12  Score=106.94  Aligned_cols=188  Identities=18%  Similarity=0.169  Sum_probs=130.8

Q ss_pred             cchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc---------------------------c
Q 023593           75 INVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------------------------S  127 (280)
Q Consensus        75 ~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------------------------~  127 (280)
                      +++|.....++..|+++++.+....+||.+..++++..+...|+.....+|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5788999999999999999999999999999999999999999875332221                           1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhc----chhhhhhcC--C
Q 023593          128 FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFN----EVDYLSRTP--L  201 (280)
Q Consensus       128 ~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~  201 (280)
                      ....|....+.++.+.++.+++++|..+..       +.     ++|.+....+...+.....+    +.......+  .
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-------~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG-------DT-----MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI  149 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCC-------CC-----chHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence            224566666777777888888888875421       11     24444444444433321111    111111111  1


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          202 LRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ..+...|...+..++.+.+    ..+++|+.++.+.++...++++.+.++++++|||+++..++.|+.+++.|..+|
T Consensus       150 ~~~~~~~~~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       150 GYPTAVWIVGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             CCchHHHHHHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            1122234444444444333    345899999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.41  E-value=1.1e-11  Score=103.47  Aligned_cols=221  Identities=18%  Similarity=0.172  Sum_probs=166.0

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-----
Q 023593           52 KVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-----  126 (280)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----  126 (280)
                      +..++.++|-....-+-+.++.+++++.+|++|-...+|+.+++..+++++.+.++|+++....+|+..+...|.     
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            346677888888888888999999999999999999999999999999999999999999999999998755432     


Q ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhc--c-hhhhhh
Q 023593          127 -----SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFN--E-VDYLSR  198 (280)
Q Consensus       127 -----~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~  198 (280)
                           +--..|..+.+++-+.-|...++-+|.+++.       +.+|.+.+-|..+.+.+.+..+.....  + .++...
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-------nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~  239 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-------NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC  239 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-------cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence                 2224799999999999999999999988754       578888888888877554433222110  0 001110


Q ss_pred             cCC--CcchH---------HHHHHHHHHHHHHHHHHHH---HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccc
Q 023593          199 TPL--LRLPS---------FWLVMTLSGFLGLAISFTS---MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLEN  264 (280)
Q Consensus       199 ~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~  264 (280)
                      .+.  +.|+.         .-..+...|.. ..+++++   ....|..|+++-.+...++..+.=++++....|.+...|
T Consensus       240 ~~~g~~eD~~~~~~~~~e~p~l~val~~~~-vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llq  318 (372)
T KOG3912|consen  240 NPRGVLEDWGDAFAALQESPSLAVALIGFT-VSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQ  318 (372)
T ss_pred             CCCcchhhHHHHHHHhcCCchhHHHHhhhh-hheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH
Confidence            010  01100         01233333333 3333333   356788999999999999999999999999999999999


Q ss_pred             hhhhHHhhhhhccCCC
Q 023593          265 SASIFFGKLALLNGLD  280 (280)
Q Consensus       265 ~~G~~l~~~g~~~~~~  280 (280)
                      +.|..+-+.|.+.|.|
T Consensus       319 ilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  319 ILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887754

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.34  E-value=1.9e-11  Score=92.65  Aligned_cols=116  Identities=21%  Similarity=0.310  Sum_probs=95.3

Q ss_pred             eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHH-HHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhh
Q 023593            3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTIL-SFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMV   80 (280)
Q Consensus         3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~   80 (280)
                      ..+|...+  +++ |....++|+..+.+ .... ...++.+.++.++++++.....+++ ......+.++++++++++..
T Consensus         8 ~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    8 VFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            35688777  577 89999999999986 3332 2222222345566777777877877 57899999999999999999


Q ss_pred             HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      +.+.++.|+++.+++++++||+++++++.++++++.|+.+..
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.23  E-value=1e-10  Score=87.56  Aligned_cols=105  Identities=20%  Similarity=0.350  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHHc-Cc-ccc-CcCcHHhhhHHHHHHHHHH-HHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHH
Q 023593           22 VYQNFISVVTVTILSFL-GV-IST-EPLTWRLIKVWLPVNVIFV-GMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY   97 (280)
Q Consensus        22 ~~r~~~~~~~l~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~   97 (280)
                      .+|..++.+++...... ++ .+. +..++|+++.+...|.+.. .++.+.++|+++.| +....+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            46777777666553322 21 111 2222344555556577664 78999999999999 58889999999999999999


Q ss_pred             HhCcccCHHHHHHHHHHHHHHHHHhcCccc
Q 023593           98 LFNKRHDNRVWAALFLMIISAISGGITDLS  127 (280)
Q Consensus        98 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~  127 (280)
                      ++|||++++++.++.++++|+.+...+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999887754

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.14  E-value=7.9e-10  Score=81.86  Aligned_cols=133  Identities=12%  Similarity=0.135  Sum_probs=104.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHH
Q 023593          132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM  211 (280)
Q Consensus       132 G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (280)
                      -.+|++++++.+++..++.|--++         +.||...+..-++.....+.......|+++...+    -++..|..+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~---------~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~----~~~k~~lfl   70 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE---------GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE----IGPKSWLFL   70 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc---------ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc----cCcceehhh
Confidence            357899999999999999998776         3566555666666666666666667777665322    123347888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +++|+.+-..-+.-|.++|.-.+.+...+.-..++.+..++++++||++|..+++|+.++.+|.++
T Consensus        71 ilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510          71 ILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            899966554444446789999999999999999999999999999999999999999999999764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.13  E-value=2.6e-08  Score=84.62  Aligned_cols=209  Identities=15%  Similarity=0.113  Sum_probs=155.8

Q ss_pred             HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHHHHHHhCcccCHHHHH----HHHHHHHHHHHHhc
Q 023593           49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVWA----ALFLMIISAISGGI  123 (280)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~~~~~l~e~~~~~~~~----~~~l~~~Gv~l~~~  123 (280)
                      +.+.--+..|+++...+..++.|.+++.+|...-+. ..+-+.+.+.+.++++|..+..++.    +++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            567777777889999999999999999988877664 6777889999999999988777654    88899999998877


Q ss_pred             Cccc--------cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhh
Q 023593          124 TDLS--------FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDY  195 (280)
Q Consensus       124 ~~~~--------~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (280)
                      .|.+        ....|+...+++.+.|..|.+..|-.           +.|+++..+-+++-.......+....++  .
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~-----------~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~  189 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF-----------HVSGWSAFLPQAIGMLIGAFIFNLFSKK--P  189 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------CCChhHhHHHHHHHHHHHHHHHhhcccc--c
Confidence            6431        12469999999999999999997774           4688888877765544433333332211  1


Q ss_pred             hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCccc----chhhhHHh
Q 023593          196 LSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLE----NSASIFFG  271 (280)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~----~~~G~~l~  271 (280)
                      ..      +...|.. +..|+.-..-|.+.+...++.+..+.=.++-+..+.+.+.|+++|||+=+.+    ..+|.+++
T Consensus       190 ~~------~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Li  262 (269)
T PF06800_consen  190 FF------EKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILI  262 (269)
T ss_pred             cc------ccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHH
Confidence            11      1112333 3446655555666667788888888888899999999999999999987765    45688888


Q ss_pred             hhhhcc
Q 023593          272 KLALLN  277 (280)
Q Consensus       272 ~~g~~~  277 (280)
                      +.|+++
T Consensus       263 v~G~il  268 (269)
T PF06800_consen  263 VIGAIL  268 (269)
T ss_pred             HHhhhc
Confidence            888875

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.10  E-value=7e-11  Score=93.92  Aligned_cols=211  Identities=15%  Similarity=0.143  Sum_probs=151.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc--cc
Q 023593           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL--SF  128 (280)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~--~~  128 (280)
                      .++..|.+++..+.++....+++.++++.++.+.+|.--|+.+++++.+|+|+...++++.++++.|+.+.++.|.  ..
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            4566777888888899999999999999999999999999999999999999999999999999999999887654  34


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhH----H-HHHHH-HHHHHHHHHHHHHhcchhhhhhcCCC
Q 023593          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFS----M-VLLNN-SLSLPLGVLLVIVFNEVDYLSRTPLL  202 (280)
Q Consensus       129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (280)
                      ++.|+.+++.|+...|+|.+..|+.....       ++....    - -+.+. ..+.|.+....--.|.++.....|  
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnA-------n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~P--  203 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNA-------NFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAP--  203 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccC-------cchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCC--
Confidence            58999999999999999999999987632       222111    1 11111 122222221111112333221111  


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593          203 RLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                           |.-+.-.+.+....++.....+..+.|...|+-.....+.......++=+-+.+-....|..+++.|=
T Consensus       204 -----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F  271 (290)
T KOG4314|consen  204 -----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF  271 (290)
T ss_pred             -----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence                 55555556666677776666777788888887666666666666776666677777778877777664

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.08  E-value=5.6e-10  Score=84.47  Aligned_cols=122  Identities=17%  Similarity=0.287  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHH
Q 023593          141 FLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLA  220 (280)
Q Consensus       141 ~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
                      +++|.+.++.|+..+         +.|+.....+....+.+ ..+.....++.+  .  +. .+...+....+.+.++..
T Consensus         1 ~~~a~~~~~~k~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~--~~-~~~~~~~~~~~~~~~~~~   65 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK---------KISPLSITFWRFLIAGI-LLILLLILGRKP--F--KN-LSPRQWLWLLFLGLLGTA   65 (126)
T ss_pred             ceeeeHHHHHHHHhc---------cCCHHHHHHHHHHHHHH-HHHHHHhhcccc--c--cC-CChhhhhhhhHhhcccee
Confidence            357888899999876         37889999999988887 555555444322  1  11 122224455666777655


Q ss_pred             HHHHH-HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          221 ISFTS-MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       221 ~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      .++.. +.+.++.++...+...+++|+.+.+++++++||+++..+++|+.+++.|..+
T Consensus        66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l  123 (126)
T PF00892_consen   66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL  123 (126)
T ss_pred             hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            55554 5789999999999999999999999999999999999999999999999753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.03  E-value=1.2e-09  Score=81.00  Aligned_cols=116  Identities=14%  Similarity=0.119  Sum_probs=97.0

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHH-HHcCcccc-CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhH
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTIL-SFLGVIST-EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVT   81 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~   81 (280)
                      ..|..++  +.+ |.+-+..|..+..+.+... ...|+.+. ..++.|.|..+...|+....++.+.++|++.-++|...
T Consensus        21 F~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~Vv   97 (140)
T COG2510          21 FAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVV   97 (140)
T ss_pred             HHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEE
Confidence            3577777  677 8999999998887666553 33444332 23567778777777888889999999999999999999


Q ss_pred             HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      -+-.++|+++++++++++|||++..+|+++.++.+|+.+++
T Consensus        98 Pldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          98 PLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             EcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999998764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.81  E-value=1.7e-07  Score=82.16  Aligned_cols=136  Identities=11%  Similarity=0.115  Sum_probs=101.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHH
Q 023593          128 FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSF  207 (280)
Q Consensus       128 ~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (280)
                      ...+|..+.+++++.++...+..|.. .         +.++.++.++....+.+.+.+.....++.+.....  ..++..
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---------~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~   72 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---------YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQK   72 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c---------CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHH
Confidence            34589999999999999999999764 2         37899999999999888776655443332221110  011222


Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          208 WLVMTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       208 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      +.... .+.++...++. .++..+++++...++..+..|++..++++++++|+++.++++|+++++.|..
T Consensus        73 ~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~  141 (296)
T PRK15430         73 IFMLA-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVL  141 (296)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence            22222 34444444444 4578999999999999999999999999999999999999999999999975

>TIGR00688 rarD rarD protein

Probab=98.80  E-value=1.7e-07  Score=80.35  Aligned_cols=136  Identities=17%  Similarity=0.190  Sum_probs=101.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhh-hhcCCCcchHHHH
Q 023593          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWL  209 (280)
Q Consensus       131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  209 (280)
                      +|+.+.+++++.++...+..|.. .         +.++.++.++-...+.+.+.+.....++.++. .+.+.......+.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~---------~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K---------PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLIL   71 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c---------cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHH
Confidence            58999999999999999999974 3         37999999999998887766654444432211 0111111111233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .....|++........+.+.+++++.+.+++.+..|+++.++++++++|+++.++++|..+++.|..
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~  138 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVI  138 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            4455565544444445678999999999999999999999999999999999999999999999964

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.71  E-value=2.7e-07  Score=80.29  Aligned_cols=129  Identities=12%  Similarity=0.090  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHH
Q 023593          133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT  212 (280)
Q Consensus       133 ~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (280)
                      +.+.+.+++++|.+++.+||..++         .++  ...+......+...|.......... ...+   +...+...+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~---------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~---~~~~~~~~~   67 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK---------EPD--FLWWALLAHSVLLTPYGLWYLAQVG-WSRL---PATFWLLLA   67 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc---------hhH--HHHHHHHHHHHHHHHHHHHhcccCC-CCCc---chhhHHHHH
Confidence            567889999999999999987552         122  3455555555566565443211001 1101   122244445


Q ss_pred             HHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..+.......+..+.+.++.++...+.+.+..|+++.+++++++||+++..+++|+.+++.|..
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~  131 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLL  131 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            5565555555556678999999999999999999999999999999999999999999999974

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.67  E-value=3.9e-07  Score=78.04  Aligned_cols=113  Identities=6%  Similarity=0.001  Sum_probs=83.8

Q ss_pred             eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHH
Q 023593            4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTV   82 (280)
Q Consensus         4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~   82 (280)
                      .+|...++.+.+ +.....+|+.++.+++........ +.++.+++++...+..+++ ......+.++++++.+++..+.
T Consensus       146 ~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       146 LYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             HHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence            456655532222 344555778888777665433221 2222345566666666665 4668888999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHH
Q 023593           83 LKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISA  118 (280)
Q Consensus        83 l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv  118 (280)
                      +.++.|++.++++++++||++++.++.+..+++.|+
T Consensus       224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999986

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.66  E-value=4e-09  Score=87.21  Aligned_cols=245  Identities=10%  Similarity=0.057  Sum_probs=169.2

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHH
Q 023593           13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA   92 (280)
Q Consensus        13 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~   92 (280)
                      +.+.|..-++.....-.++.-.+...+.   +. -...|++++.+++.-.-.+++-..|.||++....+.+-+-..+.+.
T Consensus        44 ~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~-~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~  119 (336)
T KOG2766|consen   44 GINAPTSQTFLNYVLLALVYGPIMLFRR---KY-IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVL  119 (336)
T ss_pred             cCCCccHHHHHHHHHHHHHHhhHHHhhh---HH-HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHH
Confidence            4566777777666655444433322221   11 1234778887777766666666789999999999999999999999


Q ss_pred             HHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q 023593           93 VGEMYLFNKRHDNRVWAALFLMIISAISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSG  164 (280)
Q Consensus        93 i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~  164 (280)
                      +++|+++|.|.++.++.++++...|+.+...+|.        +...+|..+.++++-+||..++..+.+.+         
T Consensus       120 ~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk---------  190 (336)
T KOG2766|consen  120 VLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK---------  190 (336)
T ss_pred             HHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh---------
Confidence            9999999999999999999999999998765542        22358999999999999999998888765         


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhh
Q 023593          165 NLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSL  243 (280)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l  243 (280)
                      |.+..+.+-...+++.+...+-. ..+. .+..  ...+++.....+.  ..++...-|+.. ..+|..|++...+--..
T Consensus       191 n~d~~elm~~lgLfGaIIsaIQ~-i~~~-~~~~--tl~w~~~i~~yl~--f~L~MFllYsl~pil~k~~~aT~~nlslLT  264 (336)
T KOG2766|consen  191 NADRVELMGFLGLFGAIISAIQF-IFER-HHVS--TLHWDSAIFLYLR--FALTMFLLYSLAPILIKTNSATMFNLSLLT  264 (336)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHH-hhhc-ccee--eEeehHHHHHHHH--HHHHHHHHHHhhHHheecCCceEEEhhHhH
Confidence            46777766666666665554432 2221 1111  1112222212111  222233334333 56788888888877777


Q ss_pred             hhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593          244 NKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG  278 (280)
Q Consensus       244 ~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~  278 (280)
                      ...+++++  -.||-+.+|.-.+..+.+..|-+.+
T Consensus       265 sDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY  297 (336)
T KOG2766|consen  265 SDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY  297 (336)
T ss_pred             HHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence            78888887  6789889999999999999887654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=2.8e-06  Score=63.15  Aligned_cols=63  Identities=13%  Similarity=0.228  Sum_probs=58.9

Q ss_pred             HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           60 IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        60 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      ++....++...++++.|.+.+..+.++.++++++.+++++|||+++++++++.++++|+.++.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            356688888999999999999999999999999999999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.46  E-value=6e-06  Score=74.13  Aligned_cols=134  Identities=17%  Similarity=0.136  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (280)
Q Consensus       131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (280)
                      +-+..++..-++++.+.++.|..++.        ..++....+|=..++.+++.++....++....   + ..+...|..
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~--------G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~-~~~~~~~~~   80 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK--------GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---P-PLSVSILSK   80 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---C-cchHHHHHH
Confidence            45677888889999999999999863        57888888888888888777766543221110   1 011222455


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHh------ccccCcccchhhhHHhhhhhc
Q 023593          211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILL------FKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~------f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      +...|+++...+...+..+++++|...+++.+..|+++.++++++      ++|+++..+++|+++++.|..
T Consensus        81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~  152 (358)
T PLN00411         81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGAL  152 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHH
Confidence            566777774333345678999999999999999999999999999      699999999999999998864

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.30  E-value=1.9e-05  Score=69.08  Aligned_cols=109  Identities=16%  Similarity=0.090  Sum_probs=82.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCccccC-cCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHH
Q 023593           17 GISLMVYQNFISVVTVTILSFLGVISTE-PLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG   94 (280)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~   94 (280)
                      +...+.+|+.++.+.............. ..+.+++..+...+++ ......+.++++++.+++....+..+.|++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~  256 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL  256 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            4456678888777665543322111111 1244566666666665 4567788999999999999999999999999999


Q ss_pred             HHHHhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593           95 EMYLFNKRHDNRVWAALFLMIISAISGGITD  125 (280)
Q Consensus        95 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  125 (280)
                      +++++||++++.++.+.++++.|+.+....+
T Consensus       257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        257 GTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998875543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.27  E-value=2e-05  Score=67.11  Aligned_cols=135  Identities=17%  Similarity=0.235  Sum_probs=109.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHH
Q 023593          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (280)
Q Consensus       129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (280)
                      +..|++.++.+-+.++.--.+.|-+.          +.++.++..+-.+-+.|..........++++..+  ..++|..+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~----------~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~   72 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE----------PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTL   72 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHH
Confidence            34799999999999999888888863          3688899888888888888877777777766554  23355556


Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          209 LVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..+..++.+ ...|...| ++.++-.....|.=.+++|.+.+++|.++|+|+++..|++.+.+..+|..
T Consensus        73 ~~~~l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~  140 (293)
T COG2962          73 LMLALTALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVL  140 (293)
T ss_pred             HHHHHHHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence            666665555 55677776 67888899999999999999999999999999999999999999888853

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.23  E-value=2.4e-05  Score=68.41  Aligned_cols=77  Identities=17%  Similarity=0.285  Sum_probs=65.1

Q ss_pred             cHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593           47 TWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (280)
Q Consensus        47 ~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  123 (280)
                      +++.+...+..+++ ..+.+.+.++++++.+++.++...++.|++..++++++++|++++.++++..+++.|++....
T Consensus       204 ~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        204 HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            33444444455655 456778889999999999999999999999999999999999999999999999999987743

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.20  E-value=1.2e-05  Score=70.47  Aligned_cols=70  Identities=16%  Similarity=0.179  Sum_probs=61.6

Q ss_pred             HHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           53 VWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        53 ~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      +....|+. +.....+++.|+.+.|.+..+-+.+..-++.++++..++|||++++++.+..+++.|..++.
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            34444554 46677889999999999999999999999999999999999999999999999999998753

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.19  E-value=6.7e-05  Score=67.35  Aligned_cols=136  Identities=13%  Similarity=0.045  Sum_probs=98.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCC-hhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHH
Q 023593          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLN-EFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSF  207 (280)
Q Consensus       129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (280)
                      ++.-..+.+..-.+...++++.|+.++.         .+ |+.+...+...+.....++.. .+ .....+.+.  ....
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~---------~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~--~~~~  113 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM---------LPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIKS--LKLF  113 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCCC--HHHH
Confidence            4444555555666667778888988773         56 899999998888765544322 11 111001110  1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          208 WLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      +..++..|+++...+...+.+.+++++...+++-..+|++++++++++++|+++.++++|+.++++|..+
T Consensus       114 ~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l  183 (350)
T PTZ00343        114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVAL  183 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence            5556667887777666667889999999999999999999999999999999999999999999999865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.18  E-value=2.2e-05  Score=68.80  Aligned_cols=77  Identities=10%  Similarity=0.044  Sum_probs=67.5

Q ss_pred             CcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           46 LTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      .+++.+...+..++.......+.++++|+.+++..+...+..|++..++++++++|++++.++++.++++.|+.+..
T Consensus       210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            45556666666665566688899999999999999999999999999999999999999999999999999997764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.18  E-value=2.2e-05  Score=58.57  Aligned_cols=95  Identities=20%  Similarity=0.317  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhc
Q 023593          178 LSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLF  256 (280)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f  256 (280)
                      .+.+.........++..+.......++   +...+..|..+...++..+ .+.++.++ ..+.+..+.|+++.++|+++|
T Consensus         7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    7 FSVLFLLIILLIRGRLRDLFRALRRKP---WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHccHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            444555554444445443322111112   2223444666554555554 67888885 788999999999999999999


Q ss_pred             cccCcccchhhhHHhhhhhc
Q 023593          257 KVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       257 ~e~~~~~~~~G~~l~~~g~~  276 (280)
                      +|+++..++.|+.+++.|.+
T Consensus        83 ~er~~~~~~~a~~l~~~Gv~  102 (113)
T PF13536_consen   83 KERLSPRRWLAILLILIGVI  102 (113)
T ss_pred             cCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999974

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.11  E-value=0.00012  Score=64.35  Aligned_cols=126  Identities=7%  Similarity=-0.046  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHH
Q 023593          138 INCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFL  217 (280)
Q Consensus       138 ~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (280)
                      +.-.+...+++++|+.+++        -..|..+...+...+.....+.. ..+..+.    +. .+...+..++..|++
T Consensus         9 ~w~~~~~~~~~~NK~~l~~--------~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~-~~~~~~~~~~~~g~~   74 (302)
T TIGR00817         9 LWYFLNVYFNIYNKKLLNV--------FPYPYFKTLISLAVGSLYCLLSW-SSGLPKR----LK-ISSALLKLLLPVAIV   74 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhh--------CChhHHHHHHHHHHHHHHHHHHH-HhCCCCC----CC-CCHHHHHHHHHHHHH
Confidence            3344445566777887762        13577778888777665544331 1111111    11 111224455556766


Q ss_pred             HHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          218 GLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       218 ~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      ........+..++++++...+++....|+++.++++++++|+++.++++|..+++.|..+
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l  134 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL  134 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence            544444556889999999999999999999999999999999999999999999999754

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.08  E-value=6.8e-05  Score=58.77  Aligned_cols=117  Identities=15%  Similarity=0.197  Sum_probs=86.3

Q ss_pred             ehhHHhc-----CCCChhHHHHHHHHHHHHHHHHHHHH-cCcccc----CcC-------cHHhhhHHHHHHHHHHHHHHH
Q 023593            5 NKFVLSG-----YNFDAGISLMVYQNFISVVTVTILSF-LGVIST----EPL-------TWRLIKVWLPVNVIFVGMLIT   67 (280)
Q Consensus         5 nK~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~-~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~   67 (280)
                      .|..+++     .+.+ |..+.......+.+.+.+... .+..+.    .+.       +.+.+..+...+++....+..
T Consensus        19 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~   97 (153)
T PF03151_consen   19 IKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLS   97 (153)
T ss_pred             HHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            4555665     4666 677777777777666655322 221111    011       112344455556677889999


Q ss_pred             hhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           68 SMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        68 ~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      .+..++++++-+++++.+...+.+.+.+.+++||++++.++.|+.+.+.|+.+..
T Consensus        98 ~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   98 SFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            9999999999999999999999999999999999999999999999999997653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.04  E-value=0.0023  Score=56.86  Aligned_cols=229  Identities=10%  Similarity=0.053  Sum_probs=129.3

Q ss_pred             CcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCccc---C----HHHHHHHHHHHHH
Q 023593           46 LTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRH---D----NRVWAALFLMIIS  117 (280)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~---~----~~~~~~~~l~~~G  117 (280)
                      .+.+.+..-+..|++....+.....+.+++.+|...-+ .-++-+...++..++++|-.   +    .....++++.++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            45566666777788889999999999999998887755 56777888889888888754   2    3357888999999


Q ss_pred             HHHHhc----Ccc--------ccc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHH---HHHH
Q 023593          118 AISGGI----TDL--------SFH-AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS---LSLP  181 (280)
Q Consensus       118 v~l~~~----~~~--------~~~-~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  181 (280)
                      +++.+.    .|.        +.+ .+|+++++++.+.++.|+.....-..-.+. ..+...++....+-+..   .+..
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~-a~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEA-AAALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhh-hhhcCCCchHHHHHHHHHHHHHHH
Confidence            998876    332        122 489999999999999999544332211000 00123344433333322   1111


Q ss_pred             HHH-HHHHH---h-cchhhhhhcCCCcc--hHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH---Hh-hhhhHHHHH
Q 023593          182 LGV-LLVIV---F-NEVDYLSRTPLLRL--PSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL---VG-SLNKIPLSV  250 (280)
Q Consensus       182 ~~~-~~~~~---~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~---~~-~l~~v~~~~  250 (280)
                      ..- .+...   . +++....+....+.  ..-...-++.|+.-...+++......+.+.....+   +. ...-+++.+
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            111 11110   1 11111111111000  01122224444443333333334444553332222   22 444578888


Q ss_pred             HHHHhccccCc------ccchhhhHHhhhhhc
Q 023593          251 AGILLFKVPTS------LENSASIFFGKLALL  276 (280)
Q Consensus       251 ~~~~~f~e~~~------~~~~~G~~l~~~g~~  276 (280)
                      .|+ +++|.=+      ...++|.++.+.|.+
T Consensus       307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~  337 (345)
T PRK13499        307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAAN  337 (345)
T ss_pred             hhh-hhhhccCCCccchhHHHHHHHHHHHHHH
Confidence            888 4888644      566888888888764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.99  E-value=0.00013  Score=63.91  Aligned_cols=79  Identities=10%  Similarity=0.001  Sum_probs=67.9

Q ss_pred             CcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           46 LTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        46 ~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      .+.+.+..++..+++ ......+.++++++.+++....+..+.|++..+.++++++|++++.++++.+++++|+.+...+
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            355666666666655 3567888899999999999999999999999999999999999999999999999999876543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.98  E-value=0.00021  Score=54.48  Aligned_cols=114  Identities=22%  Similarity=0.214  Sum_probs=80.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (280)
Q Consensus       131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (280)
                      .|+.+.+.+.++.+...++.|+-+++.+      ..+...   . ..   . .. . ...             +|   ..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g------~~~~~~---~-~~---~-~~-~-~~~-------------~p---~~   49 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP------LLSHAW---D-FI---A-AL-L-AFG-------------LA---LR   49 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC------Cccchh---H-HH---H-HH-H-HHh-------------cc---HH
Confidence            4889999999999999999999876432      111100   0 00   0 00 0 000             11   11


Q ss_pred             HHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHH--hccccCcccchhhhHHhhhhhc
Q 023593          211 MTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGIL--LFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       211 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~--~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .++.|+.+++.++..| .++|+.+..+...+..+.++...+.++.  +|||++|+.+++|+++++.|.+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~  118 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVW  118 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            2456777788888776 5799999999988888888778777775  8999999999999999999964

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.97  E-value=7.6e-05  Score=56.95  Aligned_cols=71  Identities=8%  Similarity=0.158  Sum_probs=61.6

Q ss_pred             HHHHH-HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHH--HhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593           55 LPVNV-IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY--LFNKRHDNRVWAALFLMIISAISGGITD  125 (280)
Q Consensus        55 ~~~~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  125 (280)
                      +..++ ++.+..++.++++++.|.+.+.-+.+..+..+.+.++.  ++||+++++++++++++++|+.++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34454 46778999999999999999999999999889888885  7999999999999999999999886543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.83  E-value=8.4e-06  Score=67.51  Aligned_cols=213  Identities=15%  Similarity=0.144  Sum_probs=146.0

Q ss_pred             CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHH----HHHHHHHHHH
Q 023593           44 EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVW----AALFLMIISA  118 (280)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~----~~~~l~~~Gv  118 (280)
                      +..+.+.+---+..|.+....+..++.|.+++.+|.+.-+ ..++-+-+.+++.+.+||..+..+.    .++++.+.|+
T Consensus        52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~  131 (288)
T COG4975          52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI  131 (288)
T ss_pred             CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence            3345555555555567778888999999999999887755 4567788889999999999888774    5778888888


Q ss_pred             HHHhcCcc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHh
Q 023593          119 ISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVF  190 (280)
Q Consensus       119 ~l~~~~~~--------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (280)
                      .+.+..|.        +.--+|+...+.|.+.|-.|.+..|..           +.+.++..+-|.+-.....+.+....
T Consensus       132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-----------~v~g~saiLPqAiGMv~~ali~~~~~  200 (288)
T COG4975         132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF-----------DVDGLSAILPQAIGMVIGALILGFFK  200 (288)
T ss_pred             eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc-----------cccchhhhhHHHHHHHHHHHHHhhcc
Confidence            88877653        111378888889999999999987775           35667666666655444444333333


Q ss_pred             cchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccch----h
Q 023593          191 NEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENS----A  266 (280)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~----~  266 (280)
                      +|..        .+-..|.. +..|+.-...|.+.+.+.++.+-.+.=.++-+.-+.+++-|+++++|+=|..++    +
T Consensus       201 ~~~~--------~~K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         201 MEKR--------FNKYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             cccc--------hHHHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            2211        12223444 344666555677666666666655554556666788889999999998886664    5


Q ss_pred             hhHHhhhhhc
Q 023593          267 SIFFGKLALL  276 (280)
Q Consensus       267 G~~l~~~g~~  276 (280)
                      |+++++.|.+
T Consensus       272 Giilivvgai  281 (288)
T COG4975         272 GIILIVVGAI  281 (288)
T ss_pred             hHHHHHHHhh
Confidence            7777777764

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.77  E-value=0.00024  Score=53.33  Aligned_cols=72  Identities=14%  Similarity=0.122  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      ......+++..+.++...+++++|.+.+..+ ....-+.+++.+.+++||++++.+++++.++++|+..+...
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            3445566778889999999999999988877 46889999999999999999999999999999999887543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.65  E-value=0.0005  Score=50.00  Aligned_cols=73  Identities=16%  Similarity=0.082  Sum_probs=60.8

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (280)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  123 (280)
                      .+.....-+++..+..+...|+|++|.+.+..+ ...-.+.+++.+++++||+.++.++.++.+.++|+.....
T Consensus        30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            344444456677788888899999999887655 6677889999999999999999999999999999987643

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.64  E-value=0.00061  Score=50.41  Aligned_cols=72  Identities=13%  Similarity=0.136  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      .....-+++....++...+++++|.+.+..+- ...-+.+.+.+++++||++++.++.++.++++|+..+...
T Consensus        32 ~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33344556777888888999999999988884 4788899999999999999999999999999999987543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.61  E-value=0.00028  Score=52.42  Aligned_cols=60  Identities=17%  Similarity=0.143  Sum_probs=49.8

Q ss_pred             HHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          217 LGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       217 ~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .++...+..+ ...|+.+.......-.+.++.+.+.|+++|||++|..+++|+.+++.|.+
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~  105 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIV  105 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            3344444443 57888998888888889999999999999999999999999999999964

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.59  E-value=0.00072  Score=49.84  Aligned_cols=71  Identities=14%  Similarity=0.159  Sum_probs=59.3

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHH
Q 023593           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG  121 (280)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~  121 (280)
                      +.......+++..+.++-..++|++|.+.+..+ ....-+.+.+.+.+++||++++.++.++.+++.|+...
T Consensus        35 ~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         35 KIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344444455677788888899999999987766 45778899999999999999999999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.58  E-value=0.0008  Score=49.30  Aligned_cols=72  Identities=11%  Similarity=0.120  Sum_probs=60.5

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593           51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG  122 (280)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~  122 (280)
                      +......-+++....++-..++|++|.+.+..+ .....+.+.+.+.+++||++++.++.++.+++.|+....
T Consensus        29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344444456677888888899999999887766 448889999999999999999999999999999998763

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.56  E-value=0.00067  Score=59.29  Aligned_cols=75  Identities=19%  Similarity=0.236  Sum_probs=65.9

Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhhhhc-ccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHH----HHHHHHHHHHHHHh
Q 023593           48 WRLIKVWLPVNVIFVGMLITSMFSLK-YINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVW----AALFLMIISAISGG  122 (280)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~  122 (280)
                      .+..+..+..|++......+.+.+++ +.+++.+.++.+..|+...+++.+++||+.+++++    ++.++++.|+.+..
T Consensus       208 ~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       208 KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            34455566678887778888889999 99999999999999999999999999999999999    99999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.56  E-value=0.0024  Score=55.01  Aligned_cols=79  Identities=13%  Similarity=0.185  Sum_probs=69.3

Q ss_pred             CcHHhhhHHHHHHHHHH-HHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           46 LTWRLIKVWLPVNVIFV-GMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        46 ~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      .+.+++......+++.. ..+.+.+++++..+++..+....+.|++..+.++++++|++++.++.+.++++.|+.+....
T Consensus       209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            35566777777777765 58889999999999999999999999999999999999999999999999999999887543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.47  E-value=0.0028  Score=56.19  Aligned_cols=65  Identities=11%  Similarity=0.116  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ++.+++=..-||....+.++|+-+..+++.....++++++++++++++.++.+++|+.+++.|..
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~  147 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVV  147 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Confidence            34477878889988899999999999999999999999999999999999999999999999854

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.12  E-value=0.011  Score=51.86  Aligned_cols=122  Identities=17%  Similarity=0.217  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHH
Q 023593          143 TASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAIS  222 (280)
Q Consensus       143 ~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (280)
                      +..+.++++++.++..     .+-.+.-+++.|.........+.......     . +....+  +.-....+++-..-.
T Consensus        12 ~~~~g~~qE~i~~~~~-----~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~~~~~~~   78 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPY-----GSPFPLFLTFVQFAFNALFSFILLSLFKF-----P-KSRKIP--LKKYAILSFLFFLAS   78 (303)
T ss_pred             HHHHHHHHHHHHcCCC-----CCcccHHHHHHHHHHHHHHHHHHHHhccc-----c-CCCcCh--HHHHHHHHHHHHHHH
Confidence            3346678888876432     11146677777777666655544433330     0 111111  222233345545555


Q ss_pred             HHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          223 FTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       223 ~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      ...+.+.++.+..+..+.-..+++.+++++.++++++.+..++.++.++.+|..+
T Consensus        79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~  133 (303)
T PF08449_consen   79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAI  133 (303)
T ss_pred             HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHhe
Confidence            6667889999999999999999999999999999999999999999999999754

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.12  E-value=0.026  Score=43.54  Aligned_cols=130  Identities=14%  Similarity=0.215  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHH
Q 023593          133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT  212 (280)
Q Consensus       133 ~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (280)
                      ..+++.+....+....++.|+-++.        -|++.-.+.+...+...........++. +..+   ..+.+.|..  
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~--------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~---~~~~p~w~~--   68 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKAL--------GSPLVASFISFGVGFILLLIILLITGRP-SLAS---LSSVPWWAY--   68 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHhccc-ccch---hccCChHHh--
Confidence            4667888888888888888886542        2588888888888888777776666554 2211   122222432  


Q ss_pred             HHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHH-HHHH-hcc---ccCcccchhhhHHhhhhhc
Q 023593          213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSV-AGIL-LFK---VPTSLENSASIFFGKLALL  276 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~-~~~~-~f~---e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..|+++...-......+++.++.........-.+.... ++.. +||   +++++...+|+.+.+.|.+
T Consensus        69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            27888888888777888999998888877766555444 4433 343   6899999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.06  E-value=0.0025  Score=45.75  Aligned_cols=62  Identities=11%  Similarity=0.122  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHH
Q 023593           53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLM  114 (280)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~  114 (280)
                      .......++....++...++|++|.+.+..+ .....+.+.+.+.+++||+.++.++.++.++
T Consensus        31 ~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   31 PTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             ---HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3333344678888899999999999988655 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.05  E-value=0.0071  Score=50.73  Aligned_cols=67  Identities=15%  Similarity=0.189  Sum_probs=56.7

Q ss_pred             HHHHHHHH-HHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593           54 WLPVNVIF-VGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        54 ~~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      -+..+++. .+-..+...++++.|.+.+.++.++.|.+-++.++++++|++++.||+++..++.+++-
T Consensus       212 aLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         212 ALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            33334443 33566778899999999999999999999999999999999999999999998887753

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.82  E-value=0.0043  Score=45.88  Aligned_cols=60  Identities=13%  Similarity=0.124  Sum_probs=46.9

Q ss_pred             HHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          217 LGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       217 ~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .++..++..+ .+.|+.+ ..-+++..-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi   99 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVL   99 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            3444444433 4677776 4456777778889999999999999999999999999999964

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.80  E-value=0.011  Score=51.24  Aligned_cols=65  Identities=12%  Similarity=0.170  Sum_probs=59.4

Q ss_pred             HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           60 IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        60 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      .+...-..++.|..+.|.+..+-+.+++.+..++++..++|||.++...+++.+.++|..++..+
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence            35668888899999999999999999999999999999999999999999999999999876544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.64  E-value=0.013  Score=51.51  Aligned_cols=114  Identities=16%  Similarity=0.141  Sum_probs=79.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHH
Q 023593          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWL  209 (280)
Q Consensus       130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (280)
                      ..|..+++.++++.+...+++||-..+.+.    ...+.-+                     +..     +...++.+|.
T Consensus         6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~----~~~~~~~---------------------~~~-----~~l~~~~W~~   55 (300)
T PF05653_consen    6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPR----GSLRAGS---------------------GGR-----SYLRRPLWWI   55 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----ccccccc---------------------hhh-----HHHhhHHHHH
Confidence            479999999999999999999997664331    0010000                     000     0011233344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      -++..+ .+-..   .+.+....++...+.++.+.-++..+++..++||+++..++.|..+++.|+.+
T Consensus        56 G~~~~~-~g~~~---~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l  119 (300)
T PF05653_consen   56 GLLLMV-LGEIL---NFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL  119 (300)
T ss_pred             HHHHHh-cchHH---HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence            333322 33333   34567778888899999999999999999999999999999999999999753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.008  Score=43.78  Aligned_cols=58  Identities=17%  Similarity=0.269  Sum_probs=47.6

Q ss_pred             HHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          219 LAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       219 ~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ...++... .++|+.+ ..-+++++-+-.+.+.+.|+++|||+.+..+++|+.+++.|.+
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi   99 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVI   99 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHH
Confidence            44444433 4678776 5567888999999999999999999999999999999999864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.53  E-value=0.0095  Score=44.73  Aligned_cols=60  Identities=15%  Similarity=0.280  Sum_probs=45.9

Q ss_pred             HHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          217 LGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       217 ~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ..+..++..+ .+.|+.+ ..-++++.-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi   99 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIV   99 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            3344444433 4677766 4455666777889999999999999999999999999999964

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.48  E-value=0.011  Score=43.48  Aligned_cols=58  Identities=14%  Similarity=0.230  Sum_probs=46.7

Q ss_pred             HHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          219 LAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       219 ~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ...++... .+.|+.+ ..-+++++-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi  104 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMV  104 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            33444333 5677776 5567888888899999999999999999999999999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.48  E-value=0.012  Score=43.20  Aligned_cols=50  Identities=16%  Similarity=0.323  Sum_probs=44.1

Q ss_pred             HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          227 WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       227 ~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .+.|+.+ ..-++++.-+..+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv   98 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGII   98 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            4677776 5667888889999999999999999999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.43  E-value=0.009  Score=44.20  Aligned_cols=60  Identities=13%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             HHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593           61 FVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        61 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      +-.....+++.++..|.|.+.-+ .+++=++|++.++++.+|..+++++.++.+++.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34455556788999999998877 5899999999999888888899999999999999865

Many members are annotated as potential transmembrane proteins.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.38  E-value=0.013  Score=49.85  Aligned_cols=68  Identities=12%  Similarity=0.106  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      .+..=+++-..-|...+..+++.+|.+..+....|.+++.++++++++++.+.+||.++.+.+.|..+
T Consensus        19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVL   86 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHhe
Confidence            33444555566677778899999999999999999999999999999999999999999999888753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.86  E-value=0.092  Score=45.06  Aligned_cols=69  Identities=19%  Similarity=0.287  Sum_probs=56.2

Q ss_pred             HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHH----HHHHHHHHH
Q 023593           49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWA----ALFLMIISA  118 (280)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~----~~~l~~~Gv  118 (280)
                      +.++. +.-|+++...+.+...|.+....+.+-.+.++.++...+.+.+++||+=++|++.    +++++++|.
T Consensus       194 ~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  194 KSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             chHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence            34544 4449999999999999999999999999999999999999999999998888654    444444444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.82  E-value=0.03  Score=40.09  Aligned_cols=54  Identities=20%  Similarity=0.312  Sum_probs=29.0

Q ss_pred             HHHHHHHHH-HHHhhcChhh-HhHHhhhhhHHHHHHHHHhccccCcccchhhhHHh
Q 023593          218 GLAISFTSM-WFLHQTGATT-YSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG  271 (280)
Q Consensus       218 ~~~~~~~~~-~~~~~~s~~~-~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~  271 (280)
                      +++.++..+ .+.|+.+... +.+..-+..+.+.+.|+.+|||++|..++.|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            344444333 5677776444 46777788899999999999999999999999874

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.61  E-value=0.0079  Score=50.88  Aligned_cols=66  Identities=12%  Similarity=0.128  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      ++=|+.|+..-+..|++.++.+-..++++....|+++.+++|++++|+.|..+.+|..+.+.|.++
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL  166 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL  166 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence            334566665556667888888888899999999999999999999999999999999999999754

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.38  E-value=0.18  Score=45.01  Aligned_cols=131  Identities=12%  Similarity=0.066  Sum_probs=77.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHH-----HHHHHHHHHHHHHHhcchhhhhhcCCCcc
Q 023593          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLN-----NSLSLPLGVLLVIVFNEVDYLSRTPLLRL  204 (280)
Q Consensus       130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (280)
                      ..|++++++++++++-..+-+||. +          ..+||.. +-     ..+..|...... ..++..+..+   ..+
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k----------~w~wE~~-W~v~gi~~wl~~~~~~g~~-~~~~f~~~~~---~~~   69 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-K----------KWSWETM-WSVGGIFSWLILPWLIAAL-LLPDFWAYYS---SFS   69 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-C----------CCchhHH-HHHHHHHHHHHHHHHHHHH-HhhhHHHHHH---hcC
Confidence            379999999999999988888883 2          2344432 21     111112111111 1111111111   123


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCh-hhHhHHhhhhhHHHHHHHHHhccccC---c----ccchhhhHHhhhhhc
Q 023593          205 PSFWLVMTLSGFLGLAISFTSMWFLHQTGA-TTYSLVGSLNKIPLSVAGILLFKVPT---S----LENSASIFFGKLALL  276 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~s~~~~l~~v~~~~~~~~~f~e~~---~----~~~~~G~~l~~~g~~  276 (280)
                      +..+..-.++|++-...+...+...|+.+- ....+..-++-+..++++.+++||=.   +    ....+|++++++|..
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            444555566777766667777778888774 44445555667889999999998532   2    346677777777764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.21  E-value=0.36  Score=37.20  Aligned_cols=103  Identities=14%  Similarity=0.100  Sum_probs=71.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcc-ccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHH
Q 023593           17 GISLMVYQNFISVVTVTILSFLGVI-STEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVG   94 (280)
Q Consensus        17 p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~   94 (280)
                      |..-++..+..+.+.+.+.....+. +.++.+..+|+.++ -|++-.....+..++...+.++..+.+. .-+-+.-.+.
T Consensus        30 ~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i  108 (138)
T PF04657_consen   30 PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLI  108 (138)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            6777778888887776654433222 33332222354444 4777788888889999999988877664 4455556666


Q ss_pred             HHH----HhCcccCHHHHHHHHHHHHHHHH
Q 023593           95 EMY----LFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        95 ~~~----~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      +.+    ..|++++++|.+++.++.+|+.+
T Consensus       109 D~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  109 DHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            664    35678999999999999999863

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=94.75  E-value=0.79  Score=40.59  Aligned_cols=113  Identities=12%  Similarity=0.109  Sum_probs=73.5

Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHhcch--hhhh-hcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhH
Q 023593          163 SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEV--DYLS-RTP--LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTY  237 (280)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  237 (280)
                      +.++.+....+..=+.-.++...........  +... +..  -+.++.-...+..=+..-..-|...+....+.+|.++
T Consensus        42 ~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaaty  121 (345)
T KOG2234|consen   42 KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATY  121 (345)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence            3456777766666665555555444332111  1111 111  1222311233333344444455555678999999999


Q ss_pred             hHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593          238 SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL  275 (280)
Q Consensus       238 s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~  275 (280)
                      ++...+|...+.++.+++++++.+.+||....+-+.|.
T Consensus       122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv  159 (345)
T KOG2234|consen  122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGV  159 (345)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999888875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.15  E-value=0.065  Score=47.16  Aligned_cols=111  Identities=12%  Similarity=0.116  Sum_probs=82.2

Q ss_pred             cCCCChhHHHHHHHHHHHHHHHH-HHHHc--Cccc---c-CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh
Q 023593           11 GYNFDAGISLMVYQNFISVVTVT-ILSFL--GVIS---T-EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL   83 (280)
Q Consensus        11 ~~~f~~p~~l~~~r~~~~~~~l~-~~~~~--~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l   83 (280)
                      ++..+ +.-+...+.-++.+.+. .....  +...   . .+.+.+ .......+++....+...+..++++++-++++.
T Consensus       190 ~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~  267 (316)
T KOG1441|consen  190 GESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVA  267 (316)
T ss_pred             ccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhh
Confidence            34566 67777777777776666 33222  1111   1 122223 233444457777888889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593           84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI  123 (280)
Q Consensus        84 ~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~  123 (280)
                      ....-+.+...++.+++++.++.+..|..++++|+.+...
T Consensus       268 g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  268 GHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             ccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998754

>TIGR00803 nst UDP-galactose transporter

Probab=93.74  E-value=0.09  Score=43.87  Aligned_cols=63  Identities=10%  Similarity=0.247  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593           58 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        58 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      .+..+....+-.+.++|.+.........+.++++.+++.++++|+++..++.+..+++.|+.+
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344455556677889999999999999999999999999999999999999999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=92.70  E-value=0.21  Score=44.51  Aligned_cols=68  Identities=12%  Similarity=0.026  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      ..++-|.+-+.-+|+...++++++....++++.....++.++|..+-+|++|+...++..+.+.|.+|
T Consensus       161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GVii  228 (416)
T KOG2765|consen  161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVII  228 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEE
Confidence            33455777788888888899999999999999999999999999999999999999999999999865

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.67  E-value=3.9  Score=31.88  Aligned_cols=133  Identities=17%  Similarity=0.159  Sum_probs=80.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593          131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV  210 (280)
Q Consensus       131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (280)
                      .-++.++.+..+.+..+-.+.|+.+..        -+|.--.+.+...+...+..+....++.++..  .....|  |+.
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~--------~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~p--wW~   72 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYL--------GSPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAP--WWA   72 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCc--hHH
Confidence            456677778888888888888876542        25666667777777776666555533322221  111112  333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhh-hHHHHHHHHHh-cc---ccCcccchhhhHHhhhhhc
Q 023593          211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLN-KIPLSVAGILL-FK---VPTSLENSASIFFGKLALL  276 (280)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~-~v~~~~~~~~~-f~---e~~~~~~~~G~~l~~~g~~  276 (280)
                      . .-|.+|..+-..+-....+.++.+...+.... -+.+++++-.= ||   .+++...++|+.+.+.|.+
T Consensus        73 ~-~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil  142 (150)
T COG3238          73 W-IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGIL  142 (150)
T ss_pred             H-HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHH
Confidence            2 24677776666666667777766665544443 34444444332 33   5789999999999999953

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.80  E-value=0.37  Score=39.17  Aligned_cols=57  Identities=9%  Similarity=0.002  Sum_probs=51.0

Q ss_pred             HHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       221 ~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      -+|.-..++|+.+|+..+.+..-+..+.-+++|+++||++....++..++.+.|.+|
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVm  122 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVM  122 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEE
Confidence            355444678999999999999999999999999999999999999999999999866

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.57  E-value=1.9  Score=37.47  Aligned_cols=73  Identities=5%  Similarity=0.060  Sum_probs=64.1

Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593           48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      +|-++.++..+.+.+..+.+-++-++.-.+=+.+++.-+-=++..+++.+..+.+.++.||.++.+.+.|...
T Consensus       238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            4568899999999999999988989887777778888888899999999999999999999999988888754

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.76  E-value=0.8  Score=38.33  Aligned_cols=71  Identities=10%  Similarity=0.094  Sum_probs=60.6

Q ss_pred             hhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593           50 LIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS  120 (280)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l  120 (280)
                      .++++..++++.++.+.+-+.-..+-++-+-+++.-+--+|+.+.+.++.+..++.+||++-++++.|...
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            47788888888888888877777776666666777788899999999999999999999999999988765

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=89.40  E-value=3.4  Score=34.47  Aligned_cols=70  Identities=10%  Similarity=0.150  Sum_probs=57.4

Q ss_pred             HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHH
Q 023593           48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIIS  117 (280)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~G  117 (280)
                      .+....++..|++-++..++.-+.++.++..++.+..++.-...++.+.++++|..+...+.++++++..
T Consensus       221 ~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls  290 (309)
T COG5070         221 VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS  290 (309)
T ss_pred             hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence            3444456667888888999999999999999999999999999999999888988888887776655543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=89.31  E-value=6.3  Score=35.03  Aligned_cols=131  Identities=13%  Similarity=0.109  Sum_probs=66.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHH-HHHHHHHHHHHHHHHH--HhcchhhhhhcCCCcchH
Q 023593          130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV-LLNNSLSLPLGVLLVI--VFNEVDYLSRTPLLRLPS  206 (280)
Q Consensus       130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  206 (280)
                      ..|+++..+++++.+.+-+-.||.           +-.+||.. ..+.+++..+......  ..++..+..+.   .+..
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-----------k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~---~~~~   71 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-----------KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA---TPAS   71 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-----------CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh---CChh
Confidence            379999999999999999988886           23455543 2233333332222111  12233222221   1111


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhcc-------ccCcccchhhhHHhhhhh
Q 023593          207 FWLVMTLSGFLGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFK-------VPTSLENSASIFFGKLAL  275 (280)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~-------e~~~~~~~~G~~l~~~g~  275 (280)
                      .+....+.|++ ..+.-..| ..+|+.+ +...++.--+..++..++.-++.|       ++-.....+|.+++++|.
T Consensus        72 ~l~~~~l~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI  148 (344)
T PF06379_consen   72 TLFWTFLFGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI  148 (344)
T ss_pred             HHHHHHHHHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence            12222222332 11121223 4567765 555555555555555555555433       222346678888888775

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=88.45  E-value=0.52  Score=39.68  Aligned_cols=71  Identities=14%  Similarity=0.277  Sum_probs=55.7

Q ss_pred             HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHH----HHHHHHHHHH
Q 023593           49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAA----LFLMIISAIS  120 (280)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~----~~l~~~Gv~l  120 (280)
                      ..++.+++ |+.+...+.+..+|-+...+++.=.+.++..+...+.+.+++|||=+++++..    +++...|..+
T Consensus       208 ~t~~nii~-G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         208 YTWLNIIP-GLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHHHHHhh-HHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            34555555 89999888888889998888888888889999999999999999999998654    4444444443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=86.98  E-value=2.6  Score=31.22  Aligned_cols=49  Identities=14%  Similarity=0.057  Sum_probs=37.8

Q ss_pred             HHhhcChhh-HhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          228 FLHQTGATT-YSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       228 ~~~~~s~~~-~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .+++.+=+. .-+.+.+.-+++.+.|+++.+|..+...++|..+++.|..
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~  110 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVA  110 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence            455555333 3344577789999999888888889999999999999864

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=84.66  E-value=22  Score=31.68  Aligned_cols=131  Identities=13%  Similarity=0.135  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHH-cCcccc----CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHH
Q 023593           22 VYQNFISVVTVTILSF-LGVIST----EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGE   95 (280)
Q Consensus        22 ~~r~~~~~~~l~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~   95 (280)
                      ..|-+++.++.+...- ....+.    +..|.+.+......|++.......+-.+.+|+.+|..+-+ .-+.-.+=.++-
T Consensus        39 lv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlip  118 (344)
T PF06379_consen   39 LVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIP  118 (344)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchH
Confidence            3466777777665421 111111    2334456666677777776666666678888776654432 222222222333


Q ss_pred             HHHhC-------cccCHHHHHHHHHHHHHHHHHhcC----c-------cccc-hhhHHHHHHHHHHHHHHHHHHHH
Q 023593           96 MYLFN-------KRHDNRVWAALFLMIISAISGGIT----D-------LSFH-AVGYAWQIINCFLTASYSLTLRR  152 (280)
Q Consensus        96 ~~~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~----~-------~~~~-~~G~~~~~~~~~~~a~~~i~~~~  152 (280)
                      .++.+       ++-....++++++..+|+++....    |       .++| -+|++.+++|.+..|..+.=...
T Consensus       119 pi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a  194 (344)
T PF06379_consen  119 PIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA  194 (344)
T ss_pred             HHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence            33332       334557899999999999987431    1       1334 37999999999999998875443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=82.98  E-value=0.71  Score=39.13  Aligned_cols=67  Identities=12%  Similarity=0.121  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593          211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN  277 (280)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~  277 (280)
                      -++.++.-.--||..-.+..+++-+..+.+.+-..+...+++|++++.+-.+.++.|.++|+.|..|
T Consensus        81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvm  147 (336)
T KOG2766|consen   81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVM  147 (336)
T ss_pred             hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEE
Confidence            3444666555666555677889999999999999999999999999999999999999999999876

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.93  E-value=0.93  Score=39.66  Aligned_cols=114  Identities=14%  Similarity=0.115  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHH
Q 023593          129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW  208 (280)
Q Consensus       129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (280)
                      +..|.++++.+++..+..-+..||-+++.+.....                          .++-    ..+...++.+|
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--------------------------a~~g----g~~yl~~~~Ww   68 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--------------------------AGEG----GYGYLKEPLWW   68 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--------------------------ccCC----CcchhhhHHHH
Confidence            35788888988888887777778766543210000                          0110    00111223334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      .-++..+ .|=+.   +|.+....++.-.+.++.+.-+...+++..+++|.+++...+|.+++++|+.
T Consensus        69 ~G~ltm~-vGei~---NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst  132 (335)
T KOG2922|consen   69 AGMLTMI-VGEIA---NFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGST  132 (335)
T ss_pred             HHHHHHH-HHhHh---hHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence            4333322 23223   3455667788888888899999999999999999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.6
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.44
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.05
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.79

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.60  E-value=2.7e-07  Score=67.56  Aligned_cols=73  Identities=12%  Similarity=0.150  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593           53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD  125 (280)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  125 (280)
                      ......+++....++..+++++.|.+.+..+ ..+.|+++++.+++++||++++.+++++.++++|+.+....+
T Consensus        32 ~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344345677888889999999999999888 899999999999999999999999999999999999876544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.44  E-value=4.2e-07  Score=68.97  Aligned_cols=71  Identities=13%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593           54 WLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT  124 (280)
Q Consensus        54 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~  124 (280)
                      .....+++.+..++.++++++.|++.+..+ .++.|+++++++++++||++++.+++++.++++|+.+....
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344445677889999999999999999888 99999999999999999999999999999999999987543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.05  E-value=5e-06  Score=62.99  Aligned_cols=62  Identities=11%  Similarity=0.051  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHH-HHHhhcChhhHhHH-hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          215 GFLGLAISFTSM-WFLHQTGATTYSLV-GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       215 ~~~~~~~~~~~~-~~~~~~s~~~~s~~-~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      +++++++++..+ .++|+.++.+...+ ..+.|+.+.++|+++|||++++.+++|+.+++.|.+
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~   99 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVL   99 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            445555565554 68999999988777 899999999999999999999999999999999864

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.79  E-value=4.5e-05  Score=55.56  Aligned_cols=62  Identities=11%  Similarity=0.051  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHH-HHHhhcChhhHhHH-hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593          215 GFLGLAISFTSM-WFLHQTGATTYSLV-GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL  276 (280)
Q Consensus       215 ~~~~~~~~~~~~-~~~~~~s~~~~s~~-~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~  276 (280)
                      ++.+....+..+ .+.|+.+..+...+ ..+.|+.+.+.|+++|||++|..+++|+.+++.|.+
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~   99 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVL   99 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            334444555443 57899998888666 899999999999999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00