Citrus Sinensis ID: 023619

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MRTKNGEPYRRGKAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRGLKPKFQEEKGRKTGKSKGILKIPERKTMSSPPQVPPASTRVQATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccEcccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHccccccHHHHHEHcccHHHHHHHHHHccHHHHHHHHHHccccHcccccccHHHHccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mrtkngepyrrgkaigapfatplrFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGltenyrglkpkfqeekgrktgkskgilkiperktmssppqvppastrvqATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDAlnggvqesYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Flexible Loop (DISEMBL)
mrtkngepyrrgkaigapfatpLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLggltenyrglkpkfqeekgrktgkskgilkiperktmssppqvppASTRVQATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHsslklreqterakrdsvrhakrvsdlltdalnggvqesyviEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Low Complexity Region (SEG)
MRTKNGEPYRRGKAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRGLKPKFQEEKGRKTGKSKGILKIPERKTMSSPPQVPPASTRVqataetekaqadttaaaaaggleasllqlIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Disordered region (IsUnstruct)
*************AIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRG****************************************************************************************************DLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY**
Disordered Region (DISOPRED)
************KAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTE*************************************************************************************************RHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY**
Disordered Region (DISEMBL)
*********RRGKAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRGLKPKFQEEKGRKTGKSKGILKIPERK******************************AAAAGGLEASLLQLIQNHQH********************KRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Disordered Region (DISPRO)
*******PYRRGKAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRGLKPKFQEE********KG**********************************************ASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTKNGEPYRRGKAIGAPFATPLRFEISINAELLALVLPFEIAFSILNARKSGWSSSTVLLFSYMHPTILETVLRWSISEEVYLIQRLGGLTENYRGLKPKFQEEKGRKTGKSKGILKIPERKTMSSPPQVPPASTRVQATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
O22929	152	Biogenesis of lysosome-re	yes	no	0.410	0.756	0.669	2e-42
Q5R7L8	153	Biogenesis of lysosome-re	yes	no	0.414	0.758	0.344	2e-17
P78537	153	Biogenesis of lysosome-re	yes	no	0.414	0.758	0.344	2e-17
O55102	125	Biogenesis of lysosome-re	yes	no	0.414	0.928	0.344	7e-17
D3ZKU7	125	Biogenesis of lysosome-re	yes	no	0.414	0.928	0.344	7e-17
Q2NKW0	125	Biogenesis of lysosome-re	yes	no	0.414	0.928	0.344	7e-17
Q0VFD8	125	Biogenesis of lysosome-re	yes	no	0.414	0.928	0.344	1e-16
Q54VX7	135	Biogenesis of lysosome-re	yes	no	0.410	0.851	0.373	2e-15
Q22616	129	Biogenesis of lysosome-re	yes	no	0.403	0.875	0.345	2e-13
A1Z9S1	147	Biogenesis of lysosome-re	yes	no	0.414	0.789	0.293	3e-12

>sp|O22929|BL1S1_ARATH Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana GN=BLOS1 PE=1 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 99/115 (86%)

Query: 166 QLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTL 225
           QLI +++ SSL+LRE+TER++++++RHA R +DLL  A+NGGV+E +V EKRIE EIR L
Sbjct: 36  QLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNL 95

Query: 226 AATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD 280
           A T+AKF KQTDQWLA +HA+N+AVKEIGDFENWMKTM+ DCK I AAIRNI++D
Sbjct: 96  AITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150

May mediate the vacuolar degradative transport via the intracellular vesicle trafficking from the endosome to the vacuole. Probably regulates the PIN1 and PIN2 homeostasis through its interaction with SNX1.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5R7L8|BL1S1_PONAB Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Pongo abelii GN=BLOC1S1 PE=2 SV=2

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 75/116 (64%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Pongo abelii (taxid: 9601)

>sp|P78537|BL1S1_HUMAN Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens GN=BLOC1S1 PE=1 SV=2

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 75/116 (64%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Homo sapiens (taxid: 9606)

>sp|O55102|BL1S1_MOUSE Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Mus musculus GN=Bloc1s1 PE=1 SV=2

 Score = 88.2 bits (217), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 75/116 (64%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Mus musculus (taxid: 10090)

>sp|D3ZKU7|BL1S1_RAT Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Rattus norvegicus GN=Bloc1s1 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 75/116 (64%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Rattus norvegicus (taxid: 10116)

>sp|Q2NKW0|BL1S1_BOVIN Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus GN=BLOC1S1 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 75/116 (64%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Bos taurus (taxid: 9913)

>sp|Q0VFD8|BL1S1_XENTR Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis GN=bloc1s1 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 74/116 (63%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L++ HQ    + +E  E+ ++D++  A  +++ L D LN GV ++YV +++++ E++
Sbjct: 2   LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           TL    A+F KQT QW++     N A+KEIGD ENW ++++ D + I  A+  +Y+
Sbjct: 62  TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.

Xenopus tropicalis (taxid: 8364)

>sp|Q54VX7|BL1S1_DICDI Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum GN=bloc1s1 PE=3 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 70/115 (60%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L +L+++HQ    KL+E+ E  K++++     V++ L D++N GV   +  +K++E E R
Sbjct: 2   LSKLVKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEAR 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
            L A  AKF KQT+QW+      N ++KEIGD ENW K ++ D  +I+  I  +Y
Sbjct: 62  LLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIEFLY 116

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system. May also play a role in intracellular vesicle trafficking.

Dictyostelium discoideum (taxid: 44689)

>sp|Q22616|BL1S1_CAEEL Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Caenorhabditis elegans GN=blos-1 PE=1 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 64/113 (56%)

Query: 167 LIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLA 226
           +++ H       RE  E+ K +++  A+ +S  + D LN  V ++Y  +KR+++E +   
Sbjct: 1   MLKEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFE 60

Query: 227 ATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
              A   KQT+QWL  +  +N A+KEIGD ENW KT++ D K I   +R  Y+
Sbjct: 61  NNSAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113

May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system. May also play a role in intracellular vesicle trafficking.

Caenorhabditis elegans (taxid: 6239)

>sp|A1Z9S1|BL1S1_DROME Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Drosophila melanogaster GN=blos1 PE=1 SV=2

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 66/116 (56%)

Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
           L  +++ H     K +++ E  +++++  +  ++  L D LN GV ++Y+ +KR++ E +
Sbjct: 2   LTSMVKEHHKEQAKRKQEQEVRRKEAIEASNELTQSLVDTLNVGVAQAYLNQKRLDAEAK 61

Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
            L      F KQT QWL      +TA+K++GD ENW ++++ D  +IN  +   Y+
Sbjct: 62  QLHLGATNFAKQTHQWLQLIDQFSTALKDLGDVENWARSIEGDMHTINQTLELAYK 117

Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
225434383	149	PREDICTED: biogenesis of lysosome-relate	0.510	0.959	0.657	1e-49
255553369	148	conserved hypothetical protein [Ricinus	0.525	0.993	0.620	7e-49
356553150	205	PREDICTED: biogenesis of lysosome-relate	0.435	0.595	0.688	3e-44
297826437	147	predicted protein [Arabidopsis lyrata su	0.439	0.836	0.666	1e-43
218186731	304	hypothetical protein OsI_38101 [Oryza sa	0.610	0.562	0.548	5e-43
351726886	128	uncharacterized protein LOC100305965 [Gl	0.435	0.953	0.663	3e-42
388515727	200	unknown [Lotus japonicus]	0.5	0.7	0.6	5e-42
224124784	152	predicted protein [Populus trichocarpa]	0.514	0.947	0.573	7e-42
388515055	135	unknown [Lotus japonicus]	0.435	0.903	0.663	1e-41
77548359	128	expressed protein [Oryza sativa Japonica	0.446	0.976	0.648	5e-41

>gi|225434383|ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Vitis vinifera] gi|297745789|emb|CBI15845.3| unnamed protein product [Vitis vinifera]

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 6/149 (4%)

Query: 131 VPPASTRVQATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSV 190
           +P A  RV + AE E+  AD +      GLEASLLQLIQ+H  +SLKLR++TE+AK D++
Sbjct: 6   LPVARARVLSPAEIERPNADPS------GLEASLLQLIQDHHQTSLKLRDETEKAKNDAI 59

Query: 191 RHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAV 250
           R A RVSDLL D +NGGVQE+++ EKRIELE R L AT+ +F KQT QWLA SHAINTA+
Sbjct: 60  RTAMRVSDLLVDTVNGGVQEAFINEKRIELESRALTATVIRFAKQTHQWLAASHAINTAI 119

Query: 251 KEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           KEIGDFENWMKTMD DC+SINAAIRNI+Q
Sbjct: 120 KEIGDFENWMKTMDFDCRSINAAIRNIHQ 148

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553369|ref|XP_002517726.1| conserved hypothetical protein [Ricinus communis] gi|223543124|gb|EEF44658.1| conserved hypothetical protein [Ricinus communis]

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 95/153 (62%), Positives = 119/153 (77%), Gaps = 6/153 (3%)

Query: 127 SPPQVPPASTRVQATAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAK 186
           S PQ+P A  RV +  E +K Q +       G LE SLLQLIQ+H  +SL+LRE TE+AK
Sbjct: 2   SSPQLPLARPRVASPWEIDKPQPE------PGSLEGSLLQLIQDHHQTSLRLRENTEKAK 55

Query: 187 RDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAI 246
           +D++R A +VS LL DA+NGGVQES++ EKRIE EIR LAAT+++FM+QTD WL  +HAI
Sbjct: 56  KDAIRKAAKVSGLLMDAVNGGVQESFINEKRIEFEIRALAATVSRFMRQTDHWLTATHAI 115

Query: 247 NTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           NTA+KEIGDFENW+KTM+ DCKSINAAIR I+Q
Sbjct: 116 NTAIKEIGDFENWLKTMEFDCKSINAAIRTIHQ 148

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553150|ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1-like [Glycine max]

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 103/122 (84%)

Query: 159 GLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRI 218
           GLEASL  LI  H H SL L   T++AK+D++R A+RVSDLL +A+NGGVQ+S++ +KRI
Sbjct: 15  GLEASLQHLIDLHHHKSLVLAHHTDKAKKDAIRKAERVSDLLVEAVNGGVQDSFINQKRI 74

Query: 219 ELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
           ELEIRTLAATI +FMKQTDQWLA +HA+NTA+KEIGDFENWMK M+ DCKSI  AI+NI+
Sbjct: 75  ELEIRTLAATITRFMKQTDQWLAATHALNTALKEIGDFENWMKIMEFDCKSITTAIQNIH 134

Query: 279 QD 280
           QD
Sbjct: 135 QD 136

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826437|ref|XP_002881101.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326940|gb|EFH57360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 105/123 (85%)

Query: 158 GGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKR 217
           G LE+SLLQLI +++ SSL+LRE+TER++++++RHA R +DLL  A+NGGV+E +V EKR
Sbjct: 24  GTLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKR 83

Query: 218 IELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNI 277
           IE EIR LA T+AKF KQ DQWLA +HA+N+AVKEIGDFENWMKTM+ DCK I AAIRNI
Sbjct: 84  IESEIRNLAVTVAKFGKQMDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNI 143

Query: 278 YQD 280
           ++D
Sbjct: 144 HED 146

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218186731|gb|EEC69158.1| hypothetical protein OsI_38101 [Oryza sativa Indica Group]

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/175 (54%), Positives = 118/175 (67%), Gaps = 4/175 (2%)

Query: 105 EKGRKTGKSKGILKIPERKTMSSPPQVPPASTRVQATAETEKAQADTTAAAAAGGLEASL 164
           E  R T  S  ++K     T+S     P   T  ++     KA+   +   A G LE +L
Sbjct: 133 EGRRATSSSSWVVK----STLSDSSSHPANHTCEKSYVMIPKAENIESWHPAGGQLEVAL 188

Query: 165 LQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRT 224
           LQ++Q H H SL+ R+QTERAK D+VR A RV+DLL   ++GGVQE Y+ EKRIELE R 
Sbjct: 189 LQIMQRHHHESLRQRKQTERAKMDAVRSAARVADLLVATVDGGVQELYINEKRIELEARA 248

Query: 225 LAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           L ATIA + KQTDQWLA ++AINT +KEIGDFENWMK MD DCKSINAAIRNI+Q
Sbjct: 249 LLATIAWYRKQTDQWLAATNAINTVLKEIGDFENWMKIMDFDCKSINAAIRNIHQ 303

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726886|ref|NP_001235606.1| uncharacterized protein LOC100305965 [Glycine max] gi|255627133|gb|ACU13911.1| unknown [Glycine max]

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 101/122 (82%)

Query: 159 GLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRI 218
           GLEASL  LI  H H SL L   T++AK+D++R A+ VSDLL +A+NGGVQ+S++ +KRI
Sbjct: 7   GLEASLEHLIDLHHHKSLVLAHHTDKAKKDAIRKAEHVSDLLVEAVNGGVQDSFINQKRI 66

Query: 219 ELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
           ELEIRTLA TI +FMKQTDQWLA +HA+NTA+KEIGDFENWMK M+ DCKSI  AI+NI+
Sbjct: 67  ELEIRTLATTITRFMKQTDQWLAATHALNTALKEIGDFENWMKVMEYDCKSITTAIQNIH 126

Query: 279 QD 280
           Q+
Sbjct: 127 QE 128

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515727|gb|AFK45925.1| unknown [Lotus japonicus]

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 105/140 (75%)

Query: 141 TAETEKAQADTTAAAAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLL 200
           TA     + D        GLEASL  L+Q H H SL L   TE+AK+D++R A+RVSDLL
Sbjct: 61  TASNPMEKNDVGITTEPKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLL 120

Query: 201 TDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWM 260
            +A+NGGVQ+S+V +KRIE EIR LA TI +FMKQTDQWLA +H++NTA+KEIGDFENWM
Sbjct: 121 VEAVNGGVQDSFVNQKRIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWM 180

Query: 261 KTMDLDCKSINAAIRNIYQD 280
           K M+ DCKSI  AI+NI+Q+
Sbjct: 181 KIMEYDCKSITTAIQNIHQE 200

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124784|ref|XP_002319421.1| predicted protein [Populus trichocarpa] gi|222857797|gb|EEE95344.1| predicted protein [Populus trichocarpa]

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 116/157 (73%), Gaps = 13/157 (8%)

Query: 129 PQVPPASTRVQATAETEKA-QADTTAAAAAGGLEASLLQLIQNHQHSSLKLRE----QTE 183
           PQ P A TR     E EK  Q++ T       LE+SLLQ+  +H H+SL+LRE    +TE
Sbjct: 4   PQRPSARTRRPHLPECEKPPQSNPTG----NDLESSLLQIFTDHNHTSLRLRETTVIETE 59

Query: 184 RAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATS 243
           +AK++    A RV+DLL D +NGGVQES+V EKRIE+EIR+LAA+I +FMKQ+DQWL  +
Sbjct: 60  KAKKE----AARVADLLVDKVNGGVQESFVNEKRIEMEIRSLAASIVRFMKQSDQWLTAT 115

Query: 244 HAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD 280
           H+INTA+KEIGDFENWMKTM+ DCKSI  AI NI+++
Sbjct: 116 HSINTAIKEIGDFENWMKTMEYDCKSITTAIHNIHKE 152

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515055|gb|AFK45589.1| unknown [Lotus japonicus]

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 101/122 (82%)

Query: 159 GLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRI 218
           GLEASL  L+Q H H SL L   TE+AK+D++R A+RVSDLL +A+NGGVQ+S+V +KRI
Sbjct: 14  GLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQKRI 73

Query: 219 ELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
           E EIR LA TI +FMKQTDQWLA +H++NTA+KEIGDFENWMK M+ DCKSI  AI+NI+
Sbjct: 74  EHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQNIH 133

Query: 279 QD 280
           Q+
Sbjct: 134 QE 135

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77548359|gb|ABA91156.1| expressed protein [Oryza sativa Japonica Group] gi|125535536|gb|EAY82024.1| hypothetical protein OsI_37208 [Oryza sativa Indica Group] gi|125575963|gb|EAZ17185.1| hypothetical protein OsJ_32692 [Oryza sativa Japonica Group] gi|215767965|dbj|BAH00194.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 81/125 (64%), Positives = 98/125 (78%)

Query: 155 AAAGGLEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVI 214
           AA G LEA+LL ++Q H H SL  R +TER K D+V+ A RV+DLL   ++GGVQE Y+ 
Sbjct: 3   AAGGQLEAALLHIMQRHHHQSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELYIN 62

Query: 215 EKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAI 274
           E+RIE E R L ATIA+F KQTDQWLA ++AIN+ +KEIGDFENWMK MD DCKSINAAI
Sbjct: 63  ERRIEFEARALLATIARFKKQTDQWLAATNAINSVLKEIGDFENWMKIMDFDCKSINAAI 122

Query: 275 RNIYQ 279
           RNI+Q
Sbjct: 123 RNIHQ 127

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2065759	152	BLOS1 "BLOC subunit 1" [Arabid	0.403	0.743	0.663	3.4e-38
UNIPROTKB|Q0VFD8	125	bloc1s1 "Biogenesis of lysosom	0.4	0.896	0.339	7.5e-18
UNIPROTKB|Q2NKW0	125	BLOC1S1 "Biogenesis of lysosom	0.4	0.896	0.339	9.5e-18
UNIPROTKB|P78537	153	BLOC1S1 "Biogenesis of lysosom	0.4	0.732	0.339	9.5e-18
UNIPROTKB|F2Z5S5	152	LOC100517399 "Uncharacterized	0.4	0.736	0.339	9.5e-18
UNIPROTKB|Q5R7L8	153	BLOC1S1 "Biogenesis of lysosom	0.4	0.732	0.339	9.5e-18
MGI|MGI:1195276	125	Bloc1s1 "biogenesis of lysosom	0.4	0.896	0.339	9.5e-18
RGD|1307564	125	Bloc1s1 "biogenesis of lysosom	0.4	0.896	0.339	9.5e-18
DICTYBASE|DDB_G0280077	135	bloc1s1 "biogenesis of lysosom	0.396	0.822	0.369	2.9e-16
UNIPROTKB|Q22616	129	blos-1 "Biogenesis of lysosome	0.4	0.868	0.348	1.3e-15

TAIR|locus:2065759 BLOS1 "BLOC subunit 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 75/113 (66%), Positives = 97/113 (85%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             I +++ SSL+LRE+TER++++++RHA R +DLL  A+NGGV+E +V EKRIE EIR LA 
Sbjct:    38 IDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAI 97

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD 280
             T+AKF KQTDQWLA +HA+N+AVKEIGDFENWMKTM+ DCK I AAIRNI++D
Sbjct:    98 TVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0005768 "endosome" evidence=IDA

GO:0016197 "endosomal transport" evidence=TAS

GO:0031083 "BLOC-1 complex" evidence=TAS

GO:0045324 "late endosome to vacuole transport" evidence=TAS

GO:0048364 "root development" evidence=IMP

GO:0019722 "calcium-mediated signaling" evidence=RCA

UNIPROTKB|Q0VFD8 bloc1s1 "Biogenesis of lysosome-related organelles complex 1 subunit 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 38/112 (33%), Positives = 71/112 (63%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ ++D++  A  +++ L D LN GV ++YV +++++ E++TL  
Sbjct:     6 LKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVKTLQT 65

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW++     N A+KEIGD ENW ++++ D + I  A+  +Y+
Sbjct:    66 QAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117

GO:0005758 "mitochondrial intermembrane space" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0009060 "aerobic respiration" evidence=ISS

GO:0018394 "peptidyl-lysine acetylation" evidence=ISS

GO:0031175 "neuron projection development" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q2NKW0 BLOC1S1 "Biogenesis of lysosome-related organelles complex 1 subunit 1" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:     6 LKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 65

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    66 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

GO:0031175 "neuron projection development" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005758 "mitochondrial intermembrane space" evidence=ISS

GO:0031083 "BLOC-1 complex" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0018394 "peptidyl-lysine acetylation" evidence=ISS

GO:0009060 "aerobic respiration" evidence=ISS

UNIPROTKB|P78537 BLOC1S1 "Biogenesis of lysosome-related organelles complex 1 subunit 1" [Homo sapiens (taxid:9606)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:    34 LKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 93

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    94 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

GO:0031083 "BLOC-1 complex" evidence=IDA

GO:0032438 "melanosome organization" evidence=NAS

GO:0060155 "platelet dense granule organization" evidence=NAS

GO:0031175 "neuron projection development" evidence=ISS

GO:0005758 "mitochondrial intermembrane space" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0018394 "peptidyl-lysine acetylation" evidence=IMP

GO:0009060 "aerobic respiration" evidence=IMP

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

GO:0005765 "lysosomal membrane" evidence=TAS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F2Z5S5 LOC100517399 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:    33 LKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 92

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    93 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 144

GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA

GO:0031083 "BLOC-1 complex" evidence=IEA

GO:0008089 "anterograde axon cargo transport" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005758 "mitochondrial intermembrane space" evidence=IEA

UNIPROTKB|Q5R7L8 BLOC1S1 "Biogenesis of lysosome-related organelles complex 1 subunit 1" [Pongo abelii (taxid:9601)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:    34 LKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 93

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    94 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

GO:0005758 "mitochondrial intermembrane space" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISS

GO:0009060 "aerobic respiration" evidence=ISS

GO:0018394 "peptidyl-lysine acetylation" evidence=ISS

GO:0031083 "BLOC-1 complex" evidence=ISS

GO:0031175 "neuron projection development" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS

MGI|MGI:1195276 Bloc1s1 "biogenesis of lysosome-related organelles complex-1, subunit 1" [Mus musculus (taxid:10090)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:     6 LKEHQAKQNERKELQEKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 65

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    66 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005758 "mitochondrial intermembrane space" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0008089 "anterograde axon cargo transport" evidence=IMP

GO:0009060 "aerobic respiration" evidence=ISO

GO:0018394 "peptidyl-lysine acetylation" evidence=ISO

GO:0031083 "BLOC-1 complex" evidence=ISO;IDA

GO:0031175 "neuron projection development" evidence=NAS

GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP

RGD|1307564 Bloc1s1 "biogenesis of lysosomal organelles complex-1, subunit 1" [Rattus norvegicus (taxid:10116)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 38/112 (33%), Positives = 72/112 (64%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ HQ    + +E  E+ +R+++  A  +++ L D LN GV ++Y+ +++++ E++TL  
Sbjct:     6 LKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQV 65

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A+F KQT QW+      N A+KEIGD ENW ++++LD ++I  A+  +Y+
Sbjct:    66 QAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0005758 "mitochondrial intermembrane space" evidence=ISO;ISS

GO:0005759 "mitochondrial matrix" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=ISO;ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISO;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009060 "aerobic respiration" evidence=ISO;ISS

GO:0018394 "peptidyl-lysine acetylation" evidence=ISO;ISS

GO:0031083 "BLOC-1 complex" evidence=ISO;ISS

GO:0031175 "neuron projection development" evidence=ISS

GO:0048490 "anterograde synaptic vesicle transport" evidence=ISO;ISS

DICTYBASE|DDB_G0280077 bloc1s1 "biogenesis of lysosome-related organelles complex-1, subunit 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 41/111 (36%), Positives = 67/111 (60%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             +++HQ    KL+E+ E  K++++     V++ L D++N GV   +  +K++E E R L A
Sbjct:     6 VKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEARLLQA 65

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
               AKF KQT+QW+      N ++KEIGD ENW K ++ D  +I+  I  +Y
Sbjct:    66 NTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIEFLY 116

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005758 "mitochondrial intermembrane space" evidence=IEA

UNIPROTKB|Q22616 blos-1 "Biogenesis of lysosome-related organelles complex 1 subunit 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/112 (34%), Positives = 63/112 (56%)

Query:   168 IQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAA 227
             ++ H       RE  E+ K +++  A+ +S  + D LN  V ++Y  +KR+++E +    
Sbjct:     2 LKEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFEN 61

Query:   228 TIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
               A   KQT+QWL  +  +N A+KEIGD ENW KT++ D K I   +R  Y+
Sbjct:    62 NSAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113

GO:0016197 "endosomal transport" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0031083 "BLOC-1 complex" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
pfam06320	121	pfam06320, GCN5L1, GCN5-like protein 1 (GCN5L1)	2e-41

>gnl|CDD|218987 pfam06320, GCN5L1, GCN5-like protein 1 (GCN5L1)

 Score =  138 bits (349), Expect = 2e-41
 Identities = 48/113 (42%), Positives = 73/113 (64%)

Query: 167 LIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLA 226
           L++ HQ    +LRE  ER +R+++  A  ++D L D +N GV ++Y  +KR+E E + L 
Sbjct: 1   LLKEHQAKQAELREVQERLRREAIASANALTDALVDTVNAGVAQAYANQKRLEAEAKALQ 60

Query: 227 ATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
           AT A F KQT+QWL      NTA+KEIGD ENW ++++ D K+I +A+   Y+
Sbjct: 61  ATSAAFAKQTEQWLTLIENFNTALKEIGDVENWARSIENDMKTIASALEEAYK 113

This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences. The function of this family is unknown. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG3390	120	consensus General control of amino-acid synthesis	100.0
PF06320	121	GCN5L1: GCN5-like protein 1 (GCN5L1); InterPro: IP	100.0
PF10158	131	LOH1CR12: Tumour suppressor protein; InterPro: IPR	90.19
cd00176	213	SPEC Spectrin repeats, found in several proteins i	89.06
PF10454	150	DUF2458: Protein of unknown function (DUF2458); In	85.29
PF09763	701	Sec3_C: Exocyst complex component Sec3; InterPro:	81.36
KOG2391	365	consensus Vacuolar sorting protein/ubiquitin recep	81.27
COG1322	448	Predicted nuclease of restriction endonuclease-lik	80.52
PF13166	712	AAA_13: AAA domain	80.19

>KOG3390 consensus General control of amino-acid synthesis 5-like 1 [Transcription]

Probab=100.00  E-value=1.4e-43  Score=290.44  Aligned_cols=118  Identities=52%  Similarity=0.858  Sum_probs=116.5

Q ss_pred             HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 023619          163 SLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLAT  242 (280)
Q Consensus       163 mLSsIlKEHq~kQa~lKeeqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QWl~l  242 (280)
                      ||+.|+|||+.+|..+|+.+|+.|+|||.++..++++|||+||+||+++|.|||+||.|+|.|+.++++|+|||+||+.+
T Consensus         1 ml~~llKEhs~kq~eRrelqEK~r~EAI~aA~~l~~alVdhlN~gVaqay~Nqkrld~E~k~l~~~~A~faKQT~QWl~v   80 (120)
T KOG3390|consen    1 MLPFLLKEHSEKQSERRELQEKTRKEAIRAAARLADALVDHLNGGVAQAYVNQKRLDSEIKNLAITVAKFAKQTDQWLAV   80 (120)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHhcC
Q 023619          243 SHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD  280 (280)
Q Consensus       243 vd~fn~aLKEIGDVENWAk~IE~Dmk~IeeaLe~v~~~  280 (280)
                      ++++|++||||||||||+++||+||+.|+++||++|++
T Consensus        81 te~~N~AlKEIGDvENW~ktiE~Dmk~It~alr~~ye~  118 (120)
T KOG3390|consen   81 TEAVNSALKEIGDVENWMKTIEFDMKKITAALRNIYED  118 (120)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999975

>PF06320 GCN5L1: GCN5-like protein 1 (GCN5L1); InterPro: IPR009395 This family consists of several eukaryotic GCN5-like protein 1 (GCN5L1) sequences

Probab=100.00  E-value=4.3e-40  Score=269.06  Aligned_cols=114  Identities=39%  Similarity=0.681  Sum_probs=112.4

Q ss_pred             HHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 023619          167 LIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAI  246 (280)
Q Consensus       167 IlKEHq~kQa~lKeeqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QWl~lvd~f  246 (280)
                      |||+|+++|+.+|++++++|++|++|+.+++++|+|+||.||+++|.||++||+|+|+|+.++++|+|||.+|++++++|
T Consensus         1 ~~keH~~~q~~~re~~e~~r~ea~~s~~~l~~~l~d~ln~~v~~~~~Nqk~ie~e~k~L~~~~~~l~kqt~qw~~~~~~~   80 (121)
T PF06320_consen    1 MVKEHQARQAELREEQERARKEAIASAQALTNALVDHLNSRVSEAYENQKKIEKEAKQLQRNTAKLAKQTDQWLKLVDSF   80 (121)
T ss_pred             CcHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhccHHHHHHHHHHHHHHHHHHHHHHhcC
Q 023619          247 NTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD  280 (280)
Q Consensus       247 n~aLKEIGDVENWAk~IE~Dmk~IeeaLe~v~~~  280 (280)
                      |++|||||||||||++||+||++|+++|++||+.
T Consensus        81 ~~~LKEiGDveNWa~~iE~Dl~~i~~~L~~v~~~  114 (121)
T PF06320_consen   81 NDALKEIGDVENWAEMIERDLRVIEETLRYVYEG  114 (121)
T ss_pred             HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999973

The function of this family is unknown [,].

>PF10158 LOH1CR12: Tumour suppressor protein; InterPro: IPR018780 This entry represents a region of 130 amino acids that is the most conserved part of some hypothetical proteins involved in loss of heterozygosity, and thus, tumour suppression []

Probab=90.19  E-value=11  Score=32.14  Aligned_cols=88  Identities=11%  Similarity=0.153  Sum_probs=75.0

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHH
Q 023619          191 RHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSI  270 (280)
Q Consensus       191 aSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QWl~lvd~fn~aLKEIGDVENWAk~IE~Dmk~I  270 (280)
                      +..-+++..+-+|++.-+..+-..|..|.+.+|+.....+++..++.+=.+..+.+...|++|-++.+=...+..=+..+
T Consensus        27 ~~~l~Lc~R~Q~HL~~cA~~Va~~Q~~L~~riKevd~~~~~l~~~~~erqk~~~k~ae~L~kv~els~~L~~~~~lL~~~  106 (131)
T PF10158_consen   27 RPVLRLCSRYQEHLNQCAEAVAFDQNALAKRIKEVDQEIAKLLQQMVERQKRFAKFAEQLEKVNELSQQLSRCQSLLNQT  106 (131)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35567788888899999999999999999999999999999999999999999999999999887777777777777777


Q ss_pred             HHHHHHHh
Q 023619          271 NAAIRNIY  278 (280)
Q Consensus       271 eeaLe~v~  278 (280)
                      ...|+.+.
T Consensus       107 v~~ie~LN  114 (131)
T PF10158_consen  107 VPSIETLN  114 (131)
T ss_pred             HHHHHHHH
Confidence            77766654

The exact function of these proteins is not known.

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Probab=89.06  E-value=10  Score=30.23  Aligned_cols=100  Identities=13%  Similarity=0.162  Sum_probs=64.6

Q ss_pred             hHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 023619          160 LEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQW  239 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKeeqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QW  239 (280)
                      -...+..+++.|+.=+....     .++..+..+...++.|.+........+-.-...|+..-..|...+..-.++.++.
T Consensus        31 d~~~~~~~l~~~~~~~~e~~-----~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~  105 (213)
T cd00176          31 DLESVEALLKKHEALEAELA-----AHEERVEALNELGEQLIEEGHPDAEEIQERLEELNQRWEELRELAEERRQRLEEA  105 (213)
T ss_pred             CHHHHHHHHHHHHHHHHHHH-----HCHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44567778888876554443     4667777888888888887654444444445555556566666666666555665


Q ss_pred             HHHHHHHHHhhhhhccHHHHHHHHHHHHH
Q 023619          240 LATSHAINTAVKEIGDFENWMKTMDLDCK  268 (280)
Q Consensus       240 l~lvd~fn~aLKEIGDVENWAk~IE~Dmk  268 (280)
                      ......++...+    +++|....|..+.
T Consensus       106 ~~~~~~~~~~~~----l~~wl~~~e~~l~  130 (213)
T cd00176         106 LDLQQFFRDADD----LEQWLEEKEAALA  130 (213)
T ss_pred             HHHHHHHHHHHH----HHHHHHHHHHHhc
Confidence            555566665554    8899888887543

>PF10454 DUF2458: Protein of unknown function (DUF2458); InterPro: IPR018858 This entry represents a family of uncharacterised proteins

Probab=85.29  E-value=7.9  Score=33.53  Aligned_cols=91  Identities=19%  Similarity=0.179  Sum_probs=58.4

Q ss_pred             hHHHHHHHHhhhhhhhhHHHHHHH--HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHH-HHHHHHHHHHHHHHHhH
Q 023619          160 LEASLLQLIQNHQHSSLKLREQTE--RAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIE-LEIRTLAATIAKFMKQT  236 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKeeqE--kaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE-~EaKeL~~ttakfaKQT  236 (280)
                      ..+-+..|+++|+..+.+..+.-+  .+|.++-.-...--+.+...++++|.+. .+-...+ ...++|..=   =.|--
T Consensus        25 ~~~~Ir~Li~~Q~~~Er~w~~~Re~l~~k~~~r~e~~k~l~~~l~s~g~~i~~~-~~~~~~~~e~~~EL~~f---D~kV~  100 (150)
T PF10454_consen   25 FLQRIRRLIKEQHDHERQWWEGREALIAKQKARAEKKKKLDEVLRSVGGGISDQ-SEVTTPEKEDEAELDKF---DEKVY  100 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc-cccccccHHHHHHHHHH---HHHHH
Confidence            567788889888877666655544  3333333333333467777888888775 3333333 223333322   15667


Q ss_pred             HHHHHHHHHHHHhhhhhc
Q 023619          237 DQWLATSHAINTAVKEIG  254 (280)
Q Consensus       237 ~QWl~lvd~fn~aLKEIG  254 (280)
                      ..|..++...+..|+++|
T Consensus       101 ~a~~~m~~~~~~~L~~Lg  118 (150)
T PF10454_consen  101 KASKQMSKEQQAELKELG  118 (150)
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            889999999999999997

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8

Probab=81.36  E-value=8.9  Score=39.26  Aligned_cols=65  Identities=23%  Similarity=0.421  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHhc
Q 023619          215 EKRIELEIRTLA-ATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ  279 (280)
Q Consensus       215 QKrIE~EaKeL~-~ttakfaKQT~QWl~lvd~fn~aLKEIGDVENWAk~IE~Dmk~IeeaLe~v~~  279 (280)
                      .++|..|...|. +++..+..--.+|..+.+.++.+++|+.+++.|-...+..|..+.+-|++|..
T Consensus         7 ~~~L~~eL~~le~~ni~~l~~s~~~v~~l~~~ld~a~~e~d~le~~l~~y~~~L~~~~~di~~IE~   72 (701)
T PF09763_consen    7 EERLSKELSALEAANIHSLLESEKQVNSLMEYLDEALAECDELESWLSLYDVELNSVRDDIEYIES   72 (701)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456666766665 35677788888999999999999999999999999999999999999998864

This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.

>KOG2391 consensus Vacuolar sorting protein/ubiquitin receptor VPS23 [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.27  E-value=17  Score=36.16  Aligned_cols=40  Identities=15%  Similarity=0.166  Sum_probs=26.6

Q ss_pred             HHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 023619          201 TDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQWL  240 (280)
Q Consensus       201 VD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QWl  240 (280)
                      ...|+..=.++-+-+++|+.+...|.++.+.+.++++-.-
T Consensus       234 q~slkRt~EeL~~G~~kL~~~~etLEqq~~~L~~niDIL~  273 (365)
T KOG2391|consen  234 QESLKRTEEELNIGKQKLVAMKETLEQQLQSLQKNIDILK  273 (365)
T ss_pred             HHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence            3444444445555577888888888888888888776433

>COG1322 Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only]

Probab=80.52  E-value=69  Score=32.45  Aligned_cols=115  Identities=17%  Similarity=0.229  Sum_probs=78.1

Q ss_pred             hHHHHHHHHhhhhhhhhHHHH---HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhH
Q 023619          160 LEASLLQLIQNHQHSSLKLRE---QTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQT  236 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKe---eqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT  236 (280)
                      +.+-|.++-..|+......++   ..+..........+.+.+.+.+..+....+.  |+..++.-.+=++..-..|.+|+
T Consensus        71 ~~~~l~~l~~~l~~~~~~~~eq~~~l~~~~~ql~~~~~~~~~~i~e~~~~~~~el--~~~~~~~Ll~~~~~~~e~f~e~l  148 (448)
T COG1322          71 LIQELNELKARLQQQLLQSREQLQLLIESLAQLSSEFQELANEIFEELNRRLAEL--NQQNLKQLLKPLREVLEKFREQL  148 (448)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555555555555555542   3334444444555566666667776666654  55666666677777888888888


Q ss_pred             HH-HHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHH
Q 023619          237 DQ-WLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRN  276 (280)
Q Consensus       237 ~Q-Wl~lvd~fn~aLKEIGDVENWAk~IE~Dmk~IeeaLe~  276 (280)
                      ++ -.+.+.....-+.+|=-..+=...+..|...+..+|..
T Consensus       149 ~~~~~~s~~~~~~~~~~i~~~lg~~~~la~e~~~Lt~~Lk~  189 (448)
T COG1322         149 EQRIHESAEERSTLLEEIDRLLGEIQQLAQEAGNLTAALKG  189 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            88 77788888888888888888888888888888887753

>PF13166 AAA_13: AAA domain

Probab=80.19  E-value=43  Score=33.72  Aligned_cols=95  Identities=18%  Similarity=0.230  Sum_probs=60.4

Q ss_pred             hHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHH---HH---HhhhhhHHHHHHhHHHHHHHHHHHHHHHHHH
Q 023619          160 LEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAK-RVSDL---LT---DALNGGVQESYVIEKRIELEIRTLAATIAKF  232 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKeeqEkaRkEAiaSA~-aLTda---LV---D~LN~GVaqAy~NQKrIE~EaKeL~~ttakf  232 (280)
                      .-..+...+.+|.......+.+++.++...-.... .+.+.   +.   ..+...+..+-...+.++.+.+.+......+
T Consensus       371 ~i~~~n~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~l  450 (712)
T PF13166_consen  371 IIDELNELIEEHNEKIDNLKKEQNELKDKLWLHLIAKLKEDIEEYQKEIKELEKEINSLEKKLKKAKEEIKKIEKEIKEL  450 (712)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566777888887766666666666555443322 12111   12   2223344445555566667777777777788


Q ss_pred             HHhHHHHHHHHHHHHHhhhhhc
Q 023619          233 MKQTDQWLATSHAINTAVKEIG  254 (280)
Q Consensus       233 aKQT~QWl~lvd~fn~aLKEIG  254 (280)
                      .++...=...++.||+-|+.+|
T Consensus       451 ~~~~~~~~~~~~~iN~~L~~~g  472 (712)
T PF13166_consen  451 EAQLKNTEPAADRINEELKRLG  472 (712)
T ss_pred             HHHHhhhHHHHHHHHHHHHHhC
Confidence            8887777888899999999886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 3e-05
 Identities = 45/330 (13%), Positives = 98/330 (29%), Gaps = 120/330 (36%)

Query: 64  YMHPTILETVLR--WSI---SEEVYLIQRL--GGLTENYRGLKPKFQEEKGRKTGKSKGI 116
            M    +   LR  W++    EE+   Q+     L  NY+ L    + E+ + +  ++  
Sbjct: 55  IMSKDAVSGTLRLFWTLLSKQEEMV--QKFVEEVLRINYKFLMSPIKTEQRQPSMMTR-- 110

Query: 117 LKIPER-KTMSSPPQVPPAS-TRVQATAETEKA--QAD---------------TTAAAAA 157
           + I +R +  +        + +R+Q   +  +A  +                 T  A   
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 158 -----------GGL----------EASLLQLIQN-------------HQHSSLKLR-EQT 182
                        +            ++L+++Q                 S++KLR    
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 183 ERAKR---------------DSVRHAKRVSD-------LLT-------DALNGGVQESYV 213
           +   R                +V++AK  +        LLT       D L+        
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 214 IEKRIE-LEIRTLAATIAKFMKQTDQWL---ATSH---AINTAVKEIGDF----ENWMKT 262
           ++     L    + + + K++    Q L     +     ++   + I D     +NW   
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH- 349

Query: 263 MDLDCKSINAAI------------RNIYQD 280
             ++C  +   I            R ++  
Sbjct: 350 --VNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
2eqb_B	97	RAB guanine nucleotide exchange factor SEC2; coile	89.8
2ocy_A	154	RAB guanine nucleotide exchange factor SEC2; RAB,	88.24
4i0x_B	103	ESAT-6-like protein MAB_3113; structural genomics,	86.19

>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1

Probab=89.80  E-value=4.6  Score=32.23  Aligned_cols=70  Identities=16%  Similarity=0.184  Sum_probs=54.8

Q ss_pred             hHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHH
Q 023619          160 LEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIA  230 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKeeqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~tta  230 (280)
                      ++..+..+..+... ...+|...|..+..+-.-+..||.+|.+..|.-|+.+-.=+..++...++|+.+..
T Consensus        24 ~~~e~~~L~~~l~e-E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e~~~~e~kn~~L~~qL~   93 (97)
T 2eqb_B           24 RDDEVKRLREDIAK-ENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLR   93 (97)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55566666666654 44556688888889999999999999999999999997777777777777777654

>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1

Probab=88.24  E-value=9.6  Score=32.39  Aligned_cols=86  Identities=12%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             hHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 023619          160 LEASLLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLAATIAKFMKQTDQW  239 (280)
Q Consensus       160 lesmLSsIlKEHq~kQa~lKeeqEkaRkEAiaSA~aLTdaLVD~LN~GVaqAy~NQKrIE~EaKeL~~ttakfaKQT~QW  239 (280)
                      .+..+..+..+... ...+|...|..+..+-.-+..||.+|.+-.|.-|+++-.=+..       +......+.+|...=
T Consensus        56 ~~~e~~~L~~~l~~-E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~~~~~-------~e~r~~~L~~ql~e~  127 (154)
T 2ocy_A           56 RDDEVKRLREDIAK-ENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYA-------IEILNKRLTEQLREK  127 (154)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence            45566666666654 4445667888888899999999999999999999987333333       344444555666666


Q ss_pred             HHHHHHHHHhhhhh
Q 023619          240 LATSHAINTAVKEI  253 (280)
Q Consensus       240 l~lvd~fn~aLKEI  253 (280)
                      ..+++.++..|++|
T Consensus       128 ~~~l~~lq~ql~~L  141 (154)
T 2ocy_A          128 DTLLDTLTLQLKNL  141 (154)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            66777777766655

>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}

Probab=86.19  E-value=4.1  Score=30.42  Aligned_cols=57  Identities=11%  Similarity=0.219  Sum_probs=45.7

Q ss_pred             HHHhhhhhHHHHHHhHHHHHHHHHHHHHH-------HHHHHHhHHHHHHHHHHHHHhhhhhccH
Q 023619          200 LTDALNGGVQESYVIEKRIELEIRTLAAT-------IAKFMKQTDQWLATSHAINTAVKEIGDF  256 (280)
Q Consensus       200 LVD~LN~GVaqAy~NQKrIE~EaKeL~~t-------takfaKQT~QWl~lvd~fn~aLKEIGDV  256 (280)
                      ..+.++..+.++-.....|+.+...|+..       ...|.-.-.+|...+..++.+|.+|+..
T Consensus        19 ~a~~~~~~~~~i~~~l~~L~~~v~~L~~~g~W~G~A~~ay~~~~~~W~~~a~~l~~~L~~i~~~   82 (103)
T 4i0x_B           19 VTSRARGFKEFVTENLDQLESRAQKLVQSGQWAGAAAAAYSQAHKEWMDAARELVEGLSQMEEA   82 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666666666677788888888877       6789999999999999999999998764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00