Citrus Sinensis ID: 023639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MQGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR
Secondary Structure (PSIPRED)
cccccccccccEEEEccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccEcccccHHHHHcHHHHHcHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHccccccccccHHHHHHHHcccc
Coil and Loop (DISEMBL)
mqgfrkvdpdrwefanegflgGQKHLLKTIKRRRHVSQSMQQRGGEAclevgqygldgelerlKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRrelggvqtgrkrrltatpsmenLQETisvapvgldcgpvvdytvqdqnelTSMETEIETFlsspvdnesssdidnpnagsvpapsggnfssvnETIWEDfmaddliagdpeevvvkDQSEAEVELEDlvatptdwGEELQDLVDQMGYLR
Flexible Loop (DISEMBL)
mqgfrkvdpdrwefanegflggqkhlLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRlrqhqqqsrdQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAhrrelggvqtgrkrrltatpsmenlQETISVAPVGLDCGPVVDYTVQDQNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEdlvatptdwgeELQDLVDQMGYLR
Low Complexity Region (SEG)
MQGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR
Disordered region (IsUnstruct)
***********WEFANEGFLGGQKHLLKTI****************ACLEVGQYGLDGELERLKRDRNVLMAEIVR******************************************************************************TISVAPVGLDCGPVVDYTVQ***********************************************NETIWEDFMADDLIAGDPEEVVV***********DLVATPTDWG**************
Disordered Region (DISOPRED)
MQGFRKVDPDRWEFANEGFLGGQKHLLKT*************************************************************************QQMMTFLAKALKNPS**********************************************************************************************************TIWEDFMA************************DLVATPTDWGEELQDLVDQMGYL*
Disordered Region (DISEMBL)
********PDRWEFANEGFLGGQKHLLKTIKR************GEACLEVGQYGLDGELERLKRDRNVLMAEIVRL*************MEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSMETEIETFL*************NPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR
Disordered Region (DISPRO)
MQGFRKVDPDRWEFANEGFLGGQKHLLKTIKRR********************YGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRREL****************************************************************************************VNETIWEDFMADDLIA**PEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGExxxxxxxxxxxxxxxxxxxxxQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	279	2.2.26 [Sep-21-2011]
P41152	351	Heat shock factor protein	N/A	no	0.928	0.737	0.528	5e-71
O80982	345	Heat stress transcription	no	no	0.831	0.672	0.457	7e-61
Q6VBB2	372	Heat stress transcription	yes	no	0.835	0.626	0.394	7e-43
Q338B0	358	Heat stress transcription	no	no	0.698	0.544	0.472	1e-39
Q6F388	357	Heat stress transcription	no	no	0.537	0.420	0.516	2e-39
Q84T61	506	Heat stress transcription	no	no	0.498	0.274	0.557	3e-38
Q84MN7	376	Heat stress transcription	no	no	0.501	0.372	0.535	9e-38
Q8H7Y6	359	Heat stress transcription	no	no	0.422	0.328	0.617	1e-37
Q9LUH8	406	Heat stress transcription	no	no	0.501	0.344	0.510	3e-37
Q40152	527	Heat shock factor protein	N/A	no	0.677	0.358	0.440	2e-36

>sp|P41152|HSF30_SOLPE Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1

 Score =  268 bits (684), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 147/278 (52%), Positives = 192/278 (69%), Gaps = 19/278 (6%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR+V QSM Q+G  AC+E+G YG++ ELER
Sbjct: 91  GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQQGSGACIEIGYYGMEEELER 150

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRD+NVLM EIV+LRQ QQ +R+Q+ AM +++ + E+KQ QMM+FLAK   NP+F QQ 
Sbjct: 151 LKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQY 210

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSM 182
                HR++   ++ G+KRRLT TPS+     T S  P+            + + EL S 
Sbjct: 211 LDKQVHRKDKQRIEVGQKRRLTMTPSV-----TGSDQPMNYSSS-----LQESEAELAS- 259

Query: 183 ETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGD--PE 240
              IE   S+ +DNESSS++      SV   +G +   V + IWE+ +++DLI+GD   E
Sbjct: 260 ---IEMLFSAAMDNESSSNV---RPDSVVTANGTDMEPVADDIWEELLSEDLISGDRAAE 313

Query: 241 EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
           EVVV +Q E +VE+EDLV    +WGEELQDLVDQ+G+L
Sbjct: 314 EVVVVEQPEFDVEVEDLVVKTPEWGEELQDLVDQLGFL 351

DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription.
Solanum peruvianum (taxid: 4082)

>sp|O80982|HSFA2_ARATH Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1

 Score =  234 bits (596), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 181/282 (64%), Gaps = 50/282 (17%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVS-QSMQQRG-GEACLEVGQYGLDGEL 60
           GFRK+DPDRWEFANEGFL GQKHLLK IKRRR++  Q++ Q+G G +C+EVGQYG DGE+
Sbjct: 104 GFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEV 163

Query: 61  ERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQ 120
           ERLKRD  VL+AE+VRLRQ Q  S+ Q++AME RLL TEK+QQQMMTFLAKAL NP+F Q
Sbjct: 164 ERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQ 223

Query: 121 QLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELT 180
           Q A  +  ++ L G+  GRKRRLT+TPS+  ++E +                + DQ E  
Sbjct: 224 QFAVMSKEKKSLFGLDVGRKRRLTSTPSLGTMEENL----------------LHDQ-EFD 266

Query: 181 SMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPE 240
            M+ ++E   ++ +D+E+++        S+P        ++N                  
Sbjct: 267 RMKDDMEMLFAAAIDDEANN--------SMPTKEEQCLEAMN------------------ 300

Query: 241 EVVVKD---QSEAEVELEDLVATPTDW-GEELQDLVDQMGYL 278
            V+++D   ++  +V++EDLV +P DW  ++L D+VDQMG+L
Sbjct: 301 -VMMRDGNLEAALDVKVEDLVGSPLDWDSQDLHDMVDQMGFL 341

Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). Involved in heat stress responses. Seems to be involved in other environmental stress responses. Activates ascorbate peroxidase 2 (APX2) in addition to several heat shock protein (HSPs).

Arabidopsis thaliana (taxid: 3702)

>sp|Q6VBB2|HFA2B_ORYSJ Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1

 Score =  174 bits (441), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 150/251 (59%), Gaps = 18/251 (7%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR---HVSQSMQQRGGEACLEVGQYGLDGE 59
           GFRKVDPDRWEFANE FL GQ+HLLK IKRR+   H + + Q  G    LEVG +G D E
Sbjct: 112 GFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLG--PYLEVGHFGYDAE 169

Query: 60  LERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFF 119
           ++RLKRD+ +LMAE+V+LRQ QQ ++  L AMEDRL  TE++QQQMM FLA+ +KNP F 
Sbjct: 170 IDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNPEFL 229

Query: 120 QQLAQSNAHRREL-GGVQTGRKRRLTATPSMENLQETISV---APVGLDCGPVVDYTVQD 175
           +QL   N  R+EL   +   R+RR+   P ++++  + S+   +P   D    V++ +  
Sbjct: 230 KQLMSQNEMRKELQDAISKKRRRRIDQGPEVDDVGTSSSIEQESPALFDPQESVEFLID- 288

Query: 176 QNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLI 235
                 + +++E   +S +D     +  + + G+      G    +N+  WE+ + + L+
Sbjct: 289 -----GIPSDLE---NSAMDAGGLVEPQDFDVGASEQQQIGPQGELNDNFWEELLNEGLV 340

Query: 236 AGDPEEVVVKD 246
             + +  VV+D
Sbjct: 341 GEENDNPVVED 351

Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q338B0|HFA2C_ORYSJ Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/201 (47%), Positives = 130/201 (64%), Gaps = 6/201 (2%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQS--MQQRGGEACLEVGQYGLDGEL 60
           GFRKVDPDRWEFANEGFL GQ+HLLKTIKRR+  S +   QQ+   +CLEVG++G + E+
Sbjct: 102 GFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQSLTSCLEVGEFGFEEEI 161

Query: 61  ERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQ 120
           +RLKRD+N+L+ E+V+LRQ QQ ++D + AMEDRL + E+KQ QMM FLA+A++NP FFQ
Sbjct: 162 DRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQ 221

Query: 121 QLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISV----APVGLDCGPVVDYTVQDQ 176
           QLAQ    R+EL    + ++RR        +  ET       +P   D G + + +    
Sbjct: 222 QLAQQKEKRKELEDAISKKRRRPIDNVPFYDPGETSQTEQLDSPYLFDSGVLNELSEPGI 281

Query: 177 NELTSMETEIETFLSSPVDNE 197
            EL ++   I+      VD E
Sbjct: 282 PELENLAVNIQDLGKGKVDEE 302

Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6F388|HFA2E_ORYSJ Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 110/151 (72%), Gaps = 1/151 (0%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPD+WEFANEGFL GQKHLLK+IKRR+  + S  Q+   + LEVG +G +GE+++
Sbjct: 98  GFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGSFLEVGHFGYEGEIDQ 157

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRD+++LMAE+V+LRQ QQ ++  L AME +L  TE+KQQ MM FL++ + NP F +QL
Sbjct: 158 LKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNPEFIRQL 217

Query: 123 AQSNAHRREL-GGVQTGRKRRLTATPSMENL 152
              +  R+EL   V   R+RR+   P ++++
Sbjct: 218 FSQSEMRKELEEFVSKKRRRRIDQGPELDSM 248

Transcriptional activator expressed upon environmental stress that specifically binds DNA of heat shock promoter elements (HSE). Involved in heat stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84T61|HSFA1_ORYSJ Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 105/149 (70%), Gaps = 10/149 (6%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--HVSQSMQQ-----RGGEACLEVGQYG 55
           GFRKVDPDRWEFANEGFL GQKHLLKTI RR+  H +  +QQ         AC+EVG++G
Sbjct: 97  GFRKVDPDRWEFANEGFLRGQKHLLKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFG 156

Query: 56  LDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKN 115
           ++ E+E LKRD+NVLM E+VRLRQ QQ +  QL  +  RL   E++QQQMM+FLAKA+ +
Sbjct: 157 MEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHS 216

Query: 116 PSFFQQLAQSNAH-RRELGGVQTGRKRRL 143
           P F  Q  Q N + RR +  V + +KRRL
Sbjct: 217 PGFLAQFVQQNENSRRRI--VASNKKRRL 243

Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84MN7|HFA2A_ORYSJ Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1

 Score =  157 bits (396), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/157 (53%), Positives = 105/157 (66%), Gaps = 17/157 (10%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSM------------QQRGGEACLE 50
           GFRKVDPDRWEFANEGFL G+K LLKTIKRRR    S             QQ+   ACLE
Sbjct: 113 GFRKVDPDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAACLE 172

Query: 51  VGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLA 110
           VGQ+G DG + RL+RD++VL+AE+V+LRQ QQ +R Q+ AME+R+ + E+KQQQM  FLA
Sbjct: 173 VGQFGRDGVVNRLQRDKSVLIAEVVKLRQEQQTTRAQMQAMEERISAAEQKQQQMTVFLA 232

Query: 111 KALKNPSFFQQL-----AQSNAHRRELGGVQTGRKRR 142
           +A+KNP F Q L      Q  A  R L    + ++RR
Sbjct: 233 RAMKNPGFLQMLVDRQAGQHGARNRVLEDALSKKRRR 269

Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H7Y6|HFA2D_ORYSJ Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/123 (61%), Positives = 96/123 (78%), Gaps = 5/123 (4%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQ---SMQQRGGEACLEVGQYGLDGE 59
           GFRK+DPDRWEFAN+GFL GQ+HLLK IKRRR +S    S Q  G   CLEVGQ+GLD E
Sbjct: 97  GFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPGSQQALG--TCLEVGQFGLDEE 154

Query: 60  LERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFF 119
           ++RLKRD+N+L+AE+V+LR  QQ ++  + AME+RL   E+KQ QMM FLA+A++NP FF
Sbjct: 155 IDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQNPDFF 214

Query: 120 QQL 122
            QL
Sbjct: 215 HQL 217

Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LUH8|HFA6B_ARATH Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 108/149 (72%), Gaps = 9/149 (6%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEA---------CLEVGQ 53
           GFRKV+PDRWEFANEGFL GQKHLLK I+RR+  + S Q +  ++         C+EVG+
Sbjct: 121 GFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKTSNNSNQMQQPQSSEQQSLDNFCIEVGR 180

Query: 54  YGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKAL 113
           YGLDGE++ L+RD+ VLM E+VRLRQ QQ ++  L+ +E++L  TE KQ+QMM+FLA+A+
Sbjct: 181 YGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAM 240

Query: 114 KNPSFFQQLAQSNAHRRELGGVQTGRKRR 142
           +NP F QQL +    R+E+    + +++R
Sbjct: 241 QNPDFIQQLVEQKEKRKEIEEAISKKRQR 269

Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

Arabidopsis thaliana (taxid: 3702)

>sp|Q40152|HSF8_SOLLC Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1

 Score =  152 bits (384), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/218 (44%), Positives = 126/218 (57%), Gaps = 29/218 (13%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--------------HVSQSMQQRGGEA- 47
           GFRKVDPDRWEFANEGFL GQKHLLK+I RR+              +  Q MQ  G  A 
Sbjct: 99  GFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGNAQQQMQPPGHSAS 158

Query: 48  ---CLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQ 104
              C+EVG++GL+ E+ERLKRD+NVLM E+VRLRQ QQ + +QL  M  RL   E +QQQ
Sbjct: 159 VGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQ 218

Query: 105 MMTFLAKALKNPSFFQQLA-QSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGL 163
           MM+FLAKA+  P F  Q   Q N   + +   +  +KRR+     +E+   +++ A    
Sbjct: 219 MMSFLAKAVNRPGFLAQFVQQQNESNKRI--AEGSKKRRIKQ--DIESQDPSVTPAD--- 271

Query: 164 DCGPVVDYTVQDQNELTSMETEIETFLSSP-VDNESSS 200
             G +V Y         +M  E+    SSP +DN S+S
Sbjct: 272 --GQIVKYQPGINEAAKAMLRELSKLDSSPRLDNFSNS 307

DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription.

Solanum lycopersicum (taxid: 4081)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
224092170	345	predicted protein [Populus trichocarpa]	0.971	0.785	0.669	2e-99
385880839	377	heat shock transcription factor A2 [Viti	0.953	0.705	0.634	3e-90
225429510	388	PREDICTED: heat shock factor protein HSF	0.953	0.685	0.634	4e-90
255550065	371	Heat shock factor protein HSF30, putativ	0.974	0.733	0.666	3e-89
356552370	364	PREDICTED: heat shock factor protein HSF	0.921	0.706	0.589	4e-82
356564043	355	PREDICTED: heat stress transcription fac	0.878	0.690	0.573	1e-79
406047594	362	heat stress transcription factor A2 [Cap	0.967	0.745	0.553	2e-78
357465753	378	Heat stress transcription factor A-2 [Me	0.942	0.695	0.583	2e-78
356506986	372	PREDICTED: heat shock factor protein HSF	0.931	0.698	0.531	2e-76
297251436	357	heat shock transcription factor A-2 [Ara	0.939	0.733	0.575	7e-75

>gi|224092170|ref|XP_002309492.1| predicted protein [Populus trichocarpa] gi|222855468|gb|EEE93015.1| predicted protein [Populus trichocarpa]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/278 (66%), Positives = 224/278 (80%), Gaps = 7/278 (2%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPDRWEFANEGFLGGQKHLLKTIKR+RH+SQ+ QQ+GG AC+E+GQ+  +GELER
Sbjct: 71  GFRKVDPDRWEFANEGFLGGQKHLLKTIKRKRHLSQTTQQQGGGACIELGQFEFEGELER 130

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRDRNVLMAEIVRLRQ QQQSR+ ++AMEDRL STE+KQQ++MTFLAKAL NPSF +Q 
Sbjct: 131 LKRDRNVLMAEIVRLRQQQQQSREHIAAMEDRLRSTERKQQRVMTFLAKALNNPSFIEQF 190

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSM 182
           AQ  A RRE+ GV+ GRKRRLTA+PS+ENLQE   VA V L     VDY  QD   L ++
Sbjct: 191 AQRAAQRREIRGVEIGRKRRLTASPSVENLQE---VASVALGSSQFVDYMNQD---LPTI 244

Query: 183 ETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGN-FSSVNETIWEDFMADDLIAGDPEE 241
           E E+ET  S+ +DNESSSDI +P A S+   SGG+   +VNETIWE+ + DDL++G+P E
Sbjct: 245 ENEMETLFSAVLDNESSSDIKDPIASSMDTASGGSTLDAVNETIWEELLTDDLVSGEPNE 304

Query: 242 VVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR 279
           VVV D+ E +VE+EDLVA P DW ++ QDLVDQMGYLR
Sbjct: 305 VVVSDEPEVDVEVEDLVAKPVDWSDDFQDLVDQMGYLR 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|385880839|gb|AFI98399.1| heat shock transcription factor A2 [Vitis vinifera]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 179/282 (63%), Positives = 209/282 (74%), Gaps = 16/282 (5%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPDRWEFANEGFLGGQKHLLK IKRRRHVSQ+ QQ G  AC+E+GQYGL+ ELER
Sbjct: 104 GFRKVDPDRWEFANEGFLGGQKHLLKNIKRRRHVSQNTQQGGLGACVELGQYGLEDELER 163

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRDRNVLMAEI +LRQ QQ SR++L AME R+ +TEKKQ QMMTFLAKAL NPSF QQ 
Sbjct: 164 LKRDRNVLMAEIGKLRQQQQNSRNELVAMEGRMQNTEKKQMQMMTFLAKALNNPSFVQQF 223

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSM 182
            Q    RREL G + GRKRRLT + S ENLQE I+VA +         YT QD  +++ +
Sbjct: 224 IQ---QRRELRGAEIGRKRRLTTSQSAENLQEVITVASI----DQAFSYTNQDDGDMSGI 276

Query: 183 ETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEV 242
           E+EIETF S   DNESS DI +P A S+      N  SVN+ IWE+ ++DDLIAG+ EEV
Sbjct: 277 ESEIETFFSGGWDNESSEDIKDPKADSI----DNNLGSVNDVIWEELLSDDLIAGNEEEV 332

Query: 243 V---VKDQSEAE--VELEDLVATPTDWGEELQDLVDQMGYLR 279
               + D  E E  VE+EDLVATP+DWGE+ QDLVDQM +LR
Sbjct: 333 PPLRLGDHHEPETDVEVEDLVATPSDWGEDFQDLVDQMAFLR 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429510|ref|XP_002278709.1| PREDICTED: heat shock factor protein HSF30-like [Vitis vinifera]

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 179/282 (63%), Positives = 209/282 (74%), Gaps = 16/282 (5%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPDRWEFANEGFLGGQKHLLK IKRRRHVSQ+ QQ G  AC+E+GQYGL+ ELER
Sbjct: 104 GFRKVDPDRWEFANEGFLGGQKHLLKNIKRRRHVSQNTQQGGLGACVELGQYGLEDELER 163

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRDRNVLMAEI +LRQ QQ SR++L AME R+ +TEKKQ QMMTFLAKAL NPSF QQ 
Sbjct: 164 LKRDRNVLMAEIGKLRQQQQNSRNELVAMEGRMQNTEKKQMQMMTFLAKALNNPSFVQQF 223

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSM 182
            Q    RREL G + GRKRRLT + S ENLQE I+VA +         YT QD  +++ +
Sbjct: 224 IQ---QRRELRGAEIGRKRRLTTSQSAENLQEVITVASI----DQAFSYTNQDDGDMSGI 276

Query: 183 ETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPEEV 242
           E+EIETF S   DNESS DI +P A S+      N  SVN+ IWE+ ++DDLIAG+ EEV
Sbjct: 277 ESEIETFFSGGWDNESSEDIKDPKADSI----DNNLGSVNDVIWEELLSDDLIAGNEEEV 332

Query: 243 V---VKDQSEAE--VELEDLVATPTDWGEELQDLVDQMGYLR 279
               + D  E E  VE+EDLVATP+DWGE+ QDLVDQM +LR
Sbjct: 333 PPLRLGDHHEPETDVEVEDLVATPSDWGEDFQDLVDQMAFLR 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550065|ref|XP_002516083.1| Heat shock factor protein HSF30, putative [Ricinus communis] gi|223544569|gb|EEF46085.1| Heat shock factor protein HSF30, putative [Ricinus communis]

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 186/279 (66%), Positives = 220/279 (78%), Gaps = 7/279 (2%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRK+DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQ+ G A +E+G++GLDGELER
Sbjct: 95  GFRKIDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQQSGGAYVELGKFGLDGELER 154

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRDRNVL  EI+RLRQ QQQSR+Q++AMEDRLLSTEKKQQQ+  FLAKAL NPSF QQ 
Sbjct: 155 LKRDRNVLTVEIIRLRQQQQQSREQIAAMEDRLLSTEKKQQQITAFLAKALNNPSFIQQF 214

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTSM 182
           AQ +A R EL GV  G KRRL A+PS+ENL+E  +   VG+  G VVDYT +    L +M
Sbjct: 215 AQRSAQREELRGVGVGHKRRLAASPSVENLEEEAASGSVGI--GQVVDYTDEG---LETM 269

Query: 183 ETEIETFLSSPVDNESSSDIDNPNAGSVPAPSG-GNFSSVNETIWEDFMADDLIAGDP-E 240
            TEIETFLS+ +DNESS+D+ +  AGS    SG     S NET WED + DD+IA +P E
Sbjct: 270 GTEIETFLSAALDNESSTDVRDSIAGSGQGSSGMDKLGSFNETAWEDLLNDDIIAQNPDE 329

Query: 241 EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYLR 279
           E +  +++E +VE+EDLVA P DWGE+LQDLVDQMGYLR
Sbjct: 330 ETIPSEEAELDVEVEDLVANPEDWGEDLQDLVDQMGYLR 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552370|ref|XP_003544541.1| PREDICTED: heat shock factor protein HSF30-like [Glycine max]

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 164/278 (58%), Positives = 204/278 (73%), Gaps = 21/278 (7%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGE-ACLEVGQYGLDGELE 61
           GFRKVDPDRWEFANEGFL GQ+HLLKTIKRRR+VSQS+QQ+GG  AC+EVG++GL+GELE
Sbjct: 105 GFRKVDPDRWEFANEGFLAGQRHLLKTIKRRRNVSQSLQQKGGSGACVEVGEFGLEGELE 164

Query: 62  RLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQ 121
           RLKRDRN+LMAEIVRLR  Q  SR+QL++ME RL +TEKKQQQMM+FLAKAL NPSF +Q
Sbjct: 165 RLKRDRNILMAEIVRLRHQQLNSREQLNSMETRLQATEKKQQQMMSFLAKALSNPSFTKQ 224

Query: 122 LAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTS 181
           L Q     RE+ GV+  RKRRLTA+PS+ENLQ+         D    +DY   D++ L +
Sbjct: 225 LVQKTPQSREVLGVEINRKRRLTASPSVENLQQD------DQDLA-TLDYPSHDRD-LAT 276

Query: 182 METEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPE- 240
           MET+++TF S   DNE SS+ + P +            SV +TI EDF+  DL+  +PE 
Sbjct: 277 METDMDTFFSPAYDNELSSETNEPAS-----------ISVEDTILEDFLNKDLVTWNPED 325

Query: 241 EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
           EV++ D S+ +V +EDLVA P DW E+LQDLVD M YL
Sbjct: 326 EVIIGDSSQVDVPVEDLVANPDDWSEQLQDLVDHMDYL 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564043|ref|XP_003550266.1| PREDICTED: heat stress transcription factor A-2-like [Glycine max]

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/279 (57%), Positives = 194/279 (69%), Gaps = 34/279 (12%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGE-ACLEVGQYGLDGELE 61
           GFRKVDPD+WEFANEGFL GQ+HLLKTIKRRR+VS S QQ+GG  AC+EVG++GL+GELE
Sbjct: 104 GFRKVDPDKWEFANEGFLAGQRHLLKTIKRRRNVSHSNQQKGGSGACVEVGKFGLEGELE 163

Query: 62  RLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQ 121
           RLKRDRN+LMAEIVRLR  Q  SRDQLSAME R+ +TEKKQQQMM+FLAKAL NPSF QQ
Sbjct: 164 RLKRDRNILMAEIVRLRHQQLNSRDQLSAMEARMQATEKKQQQMMSFLAKALSNPSFMQQ 223

Query: 122 LAQSNAHRRE-LGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELT 180
           L       RE L GV+  RKRRL A PS+ENLQ                    QD  +L 
Sbjct: 224 LVHKTPQSREVLLGVEINRKRRLPACPSVENLQ--------------------QDNQDLA 263

Query: 181 SMETEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDPE 240
           +MET+++TF +   DNE  ++ID P +             V ++I EDF+  DLI G+PE
Sbjct: 264 TMETDMDTFFAPAYDNEFGNEIDEPAS-----------ILVEDSILEDFLNKDLITGNPE 312

Query: 241 -EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
            EV++ D ++ +V +EDLVA P DW E+LQDLVD M YL
Sbjct: 313 DEVIIGDCTQVDVPMEDLVANPDDWSEQLQDLVDHMDYL 351

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|406047594|gb|AFS33109.1| heat stress transcription factor A2 [Capsicum annuum]

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 154/278 (55%), Positives = 202/278 (72%), Gaps = 8/278 (2%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
           GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR+V QSM Q+G   C+EVG YG++ ELER
Sbjct: 91  GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMSQQGSGPCIEVGYYGMEEELER 150

Query: 63  LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
           LKRD+NVLM EIV+LRQ QQ +R+Q+ AM +++ STEKKQ+QM+ FLAK   NP+F QQ 
Sbjct: 151 LKRDKNVLMTEIVKLRQQQQSARNQIIAMGEKIESTEKKQEQMVNFLAKIFSNPTFLQQY 210

Query: 123 AQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQN-ELTS 181
              +  R++   ++ G+KRRLT TPS+ENLQ+  SVA         ++Y+ Q++  ELT+
Sbjct: 211 LDKHVQRKDKQRIEVGQKRRLTMTPSIENLQDVASVATA---SDQPMNYSNQEREAELTN 267

Query: 182 METEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGD-PE 240
           + T+IE   S+ ++NESSS++    + SV   SG +   V E IWE+ + DD I+GD  E
Sbjct: 268 IGTDIEMLFSAALENESSSNV---RSASVVTASGTDMEPVPENIWEELLGDDHISGDGAE 324

Query: 241 EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
           EV + DQ E  VE+EDLV+    WGEEL+DLVDQ+G+L
Sbjct: 325 EVPIVDQPEFVVEVEDLVSKTPVWGEELEDLVDQLGFL 362

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465753|ref|XP_003603161.1| Heat stress transcription factor A-2 [Medicago truncatula] gi|355492209|gb|AES73412.1| Heat stress transcription factor A-2 [Medicago truncatula]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/283 (58%), Positives = 210/283 (74%), Gaps = 20/283 (7%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQS--MQQRGGEACLEVGQYGLDGEL 60
           GFRKVDPDRWEFANEGFL GQ++LLKTIKRRR+++QS  MQQ  G +C+E+G++GL+GE+
Sbjct: 106 GFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNLTQSQAMQQETGGSCIELGEFGLEGEI 165

Query: 61  ERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQ 120
           ERL+RDR VLMAEIV+LRQ Q  SR+QLSAME RLL TEKK QQMM FLAKAL N SF Q
Sbjct: 166 ERLRRDRAVLMAEIVKLRQQQHNSREQLSAMEARLLVTEKKHQQMMNFLAKALSNQSFIQ 225

Query: 121 QLAQSNAHRRELGGVQTGRKRRLTATPSMENLQE---TISVAPVGLDCGPVVDYTVQDQN 177
           QLAQ+    REL GV+  RKRRLTA+ S+ENLQ     I   P+      VVDY+ Q+Q 
Sbjct: 226 QLAQN----RELKGVEMKRKRRLTASLSLENLQNDSGAIRAVPI----ESVVDYSCQEQQ 277

Query: 178 E-LTSMETEIETFLSSPVDNESSSDIDNPNA-GSVPAPSGGNFSSVNETIWEDFMADDLI 235
           E LT++E+E+ET LS+  DNESSS++ +  A  SVP    GN S++ + +WED +  +L+
Sbjct: 278 EGLTTIESEMETLLSA-YDNESSSEVKDYTALSSVPT---GNESNLGDAVWEDLLNQELV 333

Query: 236 AGDPE-EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGY 277
            G+PE EVV+ D S+ +V +EDLV    +W  +LQ LVDQMG+
Sbjct: 334 GGNPEDEVVIGDFSQIDVPVEDLVEKNDNWTVDLQKLVDQMGF 376

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506986|ref|XP_003522253.1| PREDICTED: heat shock factor protein HSF30-like isoform 1 [Glycine max] gi|356506988|ref|XP_003522254.1| PREDICTED: heat shock factor protein HSF30-like isoform 2 [Glycine max] gi|402715725|gb|AFQ93676.1| heat shock transcription factor HSFA2 [Glycine max]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 150/282 (53%), Positives = 200/282 (70%), Gaps = 22/282 (7%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVS--QSMQQRGGE-ACLEVGQYGLDGE 59
           GFRK+DPD+WEFANEGFL GQ+ LLKTIKRRRHV+  Q+    GG  AC+E+G++GL+GE
Sbjct: 103 GFRKIDPDKWEFANEGFLAGQRQLLKTIKRRRHVTVTQTQSHEGGSGACVELGEFGLEGE 162

Query: 60  LERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFF 119
           +ERL+RDR VLMAEIVRLRQ Q  SR+QL +ME RL +TEKK QQMM FLAKAL N +F 
Sbjct: 163 MERLRRDRTVLMAEIVRLRQQQHNSREQLLSMETRLQATEKKHQQMMNFLAKALNNQAFI 222

Query: 120 QQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNEL 179
           QQ  Q NA  +EL G +  RKRRLTATPS+ENLQ+                + +  +   
Sbjct: 223 QQFLQRNAQNKELQGAR--RKRRLTATPSVENLQQD--------------HFALSIEEGS 266

Query: 180 TSMETEIETFLSSPVDN--ESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAG 237
            ++E+++E+F S+  ++  ES+S++ +P   SVP  SG N   V++++WED +  DL+AG
Sbjct: 267 ATIESQMESFFSAACNDPLESNSELKDPILSSVPVASGSNLGEVSDSVWEDLLNQDLVAG 326

Query: 238 DP-EEVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
           DP EEVV+ D S+ +V +EDL+A   +W E+LQ+LVD MGYL
Sbjct: 327 DPEEEVVIGDFSQVDVPVEDLIADADEWSEDLQNLVDHMGYL 368

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297251436|gb|ADI24983.1| heat shock transcription factor A-2 [Arachis hypogaea subsp. hypogaea] gi|297251439|gb|ADI24985.1| heat shock transcription factor A-2 [Arachis hypogaea subsp. hypogaea]

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 160/278 (57%), Positives = 201/278 (72%), Gaps = 16/278 (5%)

Query: 3   GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGE-ACLEVGQYGLDGELE 61
           GFRKVDPDRWEFANEGFL GQKHLLKTIKRRR+VSQ  QQRGG   CLE+G+YGL+GE+E
Sbjct: 90  GFRKVDPDRWEFANEGFLAGQKHLLKTIKRRRNVSQGTQQRGGGGPCLELGEYGLEGEVE 149

Query: 62  RLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQ 121
           RL+RDRNVLMAEIV+LRQ Q  SR+++  ME RL +TEKKQQQMMTFLAKAL NPSF Q 
Sbjct: 150 RLRRDRNVLMAEIVKLRQQQHNSRNEVLLMETRLQATEKKQQQMMTFLAKALNNPSFMQH 209

Query: 122 LAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTS 181
           LA  N+   +L GV+  RKRRLTA+P   N+    +VA V ++   V DY   +Q EL +
Sbjct: 210 LADKNSQNTQLFGVEVKRKRRLTASP---NVDPVTTVAAVPIESV-VEDYRNHEQ-ELAN 264

Query: 182 METEIETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNETIWEDFMADDLIAGDP-E 240
           +E E++TF ++  D E + + ++P   S  + SG       +TI EDF+ +DL+ G+P +
Sbjct: 265 IEFEMDTFFATSYDTEPNDENNDP--ASTTSVSG-------DTILEDFLKEDLVTGNPQD 315

Query: 241 EVVVKDQSEAEVELEDLVATPTDWGEELQDLVDQMGYL 278
           EVV+ D S  ++  EDL ATP DW EELQDLV+ MGYL
Sbjct: 316 EVVIGDCSRTDIPAEDLAATPKDWTEELQDLVNHMGYL 353

Source: Arachis hypogaea subsp. hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
TAIR|locus:2057371	345	HSFA2 "AT2G26150" [Arabidopsis	0.551	0.446	0.647	8.8e-59
TAIR|locus:2075447	468	HSFA1E "AT3G02990" [Arabidopsi	0.763	0.455	0.407	9.4e-40
TAIR|locus:2094339	406	HSFA6B "AT3G22830" [Arabidopsi	0.906	0.623	0.381	7e-38
TAIR|locus:2149050	481	HSF3 "AT5G16820" [Arabidopsis	0.745	0.432	0.433	4.9e-37
TAIR|locus:2028326	485	HSFA1D "AT1G32330" [Arabidopsi	0.892	0.513	0.379	3.1e-35
TAIR|locus:2005495	495	HSF1 "AT4G17750" [Arabidopsis	0.501	0.282	0.490	3.7e-32
TAIR|locus:2170832	282	HSFA6A "AT5G43840" [Arabidopsi	0.580	0.574	0.398	2.5e-26
TAIR|locus:2077249	282	AT-HSFA7B "AT3G63350" [Arabido	0.541	0.535	0.417	5.9e-25
TAIR|locus:2083690	272	HSFA7A "AT3G51910" [Arabidopsi	0.487	0.5	0.427	2e-24
TAIR|locus:2144603	412	HSFA3 "AT5G03720" [Arabidopsis	0.688	0.466	0.351	1.9e-23

TAIR|locus:2057371 HSFA2 "AT2G26150" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
 Identities = 101/156 (64%), Positives = 126/156 (80%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVS-QSMQQRG-GEACLEVGQYGLDGEL 60
             GFRK+DPDRWEFANEGFL GQKHLLK IKRRR++  Q++ Q+G G +C+EVGQYG DGE+
Sbjct:   104 GFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEV 163

Query:    61 ERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQ 120
             ERLKRD  VL+AE+VRLRQ Q  S+ Q++AME RLL TEK+QQQMMTFLAKAL NP+F Q
Sbjct:   164 ERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQ 223

Query:   121 QLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETI 156
             Q A  +  ++ L G+  GRKRRLT+TPS+  ++E +
Sbjct:   224 QFAVMSKEKKSLFGLDVGRKRRLTSTPSLGTMEENL 259

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP;RCA

GO:0009644 "response to high light intensity" evidence=IEP;RCA

GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA

GO:0010200 "response to chitin" evidence=IEP

GO:0034620 "cellular response to unfolded protein" evidence=IEP;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IMP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0010286 "heat acclimation" evidence=RCA;IMP

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0006457 "protein folding" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2075447 HSFA1E "AT3G02990" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 93/228 (40%), Positives = 134/228 (58%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVS-QSMQQRGGE-----ACLEVGQYGL 56
             GFRKVDPDRWEFANEGFL GQK +LK+I RR+    Q  QQ   +     AC+EVG++GL
Sbjct:    83 GFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSSVGACVEVGKFGL 142

Query:    57 DGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNP 116
             + E+ERL+RD+NVLM E+VRLRQ QQ +   L  +  ++   E++QQQMM+FLAKA+++P
Sbjct:   143 EEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSP 202

Query:   117 SFFQQLAQ-SNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQD 175
              F  Q +Q SN   + +   ++ +KRRL     M +    ++    GL    +V Y    
Sbjct:   203 GFLNQFSQQSNEANQHIS--ESNKKRRLPVEDQMNSGSHGVN----GLS-RQIVRYQSSM 255

Query:   176 QNELTSMETEIETFLSSPVDNESSSDIDNPNAGSVPAPS-GGNFSSVN 222
              +   +M  +I+   ++P     SS+  +   G VP  +   N SS N
Sbjct:   256 NDATNTMLQQIQQMSNAPSHESLSSNNGSFLLGDVPNSNISDNGSSSN 303

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2094339 HSFA6B "AT3G22830" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 106/278 (38%), Positives = 152/278 (54%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--HVSQSMQQ-RGGEA------CLEVGQ 53
             GFRKV+PDRWEFANEGFL GQKHLLK I+RR+  + S  MQQ +  E       C+EVG+
Sbjct:   121 GFRKVNPDRWEFANEGFLRGQKHLLKNIRRRKTSNNSNQMQQPQSSEQQSLDNFCIEVGR 180

Query:    54 YGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKAL 113
             YGLDGE++ L+RD+ VLM E+VRLRQ QQ ++  L+ +E++L  TE KQ+QMM+FLA+A+
Sbjct:   181 YGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAM 240

Query:   114 KNPSFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDC-------- 165
             +NP F QQL +    R+E+      +KR+        N+++    +  G D         
Sbjct:   241 QNPDFIQQLVEQKEKRKEIEEA-ISKKRQRPIDQGKRNVEDYGDESGYGNDVAASSSALI 299

Query:   166 GPVVDYTVQDQNELTSMETE-IETFLSSPVDNESS-SDIDNPNAGS----VPAPSGGNFS 219
             G   +YT  + +E    E + +   +    DN S+  ++ N   G+    V     G   
Sbjct:   300 GMSQEYTYGNMSEFEMSELDKLAMHIQGLGDNSSAREEVLNVEKGNDEEEVEDQQQGYHK 359

Query:   220 SVNETIWEDFMADDLIAGDPEEVVVKDQSEAEVELEDL 257
               NE   E F  D L  G   +    DQ   +V ++ L
Sbjct:   360 ENNEIYGEGFWEDLLNEGQNFDFE-GDQENVDVLIQQL 396

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2149050 HSF3 "AT5G16820" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 101/233 (43%), Positives = 145/233 (62%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--HVSQSMQQRGGE-----ACLEVGQYG 55
             GFRKVDPDRWEFANEGFL G+K LLK+I RR+  HV Q+ QQ   +     AC+EVG++G
Sbjct:    87 GFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGKFG 146

Query:    56 LDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKN 115
             ++ E+ERLKRD+NVLM E+VRLRQ QQ + +QL  +  ++   E++QQQMM+FLAKA+++
Sbjct:   147 IEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQS 206

Query:   116 PSFFQQLAQSNAH--RRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTV 173
             P F  QL Q N +   R++ G  + +KRRL      EN  + ++    GL+   +V Y  
Sbjct:   207 PGFLNQLVQQNNNDGNRQIPG--SNKKRRLPVD-EQENRGDNVAN---GLN-RQIVRYQ- 258

Query:   174 QDQNELTSMETEIETFLSSPVDNESSSDIDNPNA---GSVPAPSG---GNFSS 220
                NE  + +  +  FL++       S  +NP++   G VP+ +    GN SS
Sbjct:   259 PSINE--AAQNMLRQFLNTSTSPRYESVSNNPDSFLLGDVPSSTSVDNGNPSS 309

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IMP

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP;IMP;RCA

TAIR|locus:2028326 HSFA1D "AT1G32330" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 106/279 (37%), Positives = 148/279 (53%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR--HVS----QSMQQRGGE-----ACLEV 51
             GFRKVDPDRWEFANEGFL GQKHLL++I RR+  H      Q  Q   G+     AC+EV
Sbjct:    97 GFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQGHQRSQHSNGQNSSVSACVEV 156

Query:    52 GQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAK 111
             G++GL+ E+ERLKRD+NVLM E+VRLRQ QQ + +QL  M  RL   E +QQQ+M+FLAK
Sbjct:   157 GKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAK 216

Query:   112 ALKNP----SFFQQLAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGP 167
             A+++P     F QQ  Q N   R +    T +KRR      + N     S  P   D G 
Sbjct:   217 AVQSPHFLSQFLQQQNQQNESNRRIS--DTSKKRRFKRDGIVRNND---SATP---D-GQ 267

Query:   168 VVDYTVQDQNELTSMETEI---ETFLSSPVDNESSSDIDNPNAGSVPAPSGGNFSSVNET 224
             +V Y      +  +M  ++   E + +   D     +  +   G+    S    S +  T
Sbjct:   268 IVKYQPPMHEQAKAMFKQLMKMEPYKTGD-DGFLLGNGTSTTEGTEMETSSNQVSGI--T 324

Query:   225 IWEDFMADDLIAGDPEEVVVKDQSEAEVELEDLVATPTD 263
             + E   A ++ +  P E   ++ S A    E+ + +P D
Sbjct:   325 LKEMPTASEIQSSSPIETTPENVSAASEATENCIPSPDD 363

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009408 "response to heat" evidence=IEP

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2005495 HSF1 "AT4G17750" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 77/157 (49%), Positives = 103/157 (65%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHV-----------SQSMQQRGGE----- 46
             GFRKVDPDRWEFANEGFL GQKHLLK I RR+ V           SQ + Q  G      
Sbjct:   112 GFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALS 171

Query:    47 ACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMM 106
             +C+EVG++GL+ E+E+LKRD+NVLM E+V+LRQ QQ + ++L  +   L   E++QQQ+M
Sbjct:   172 SCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIM 231

Query:   107 TFLAKALKNPSFFQQLAQSNAHRRELGGVQTGRKRRL 143
             +FLAKA++NP+F  Q  Q       +   +  +KRRL
Sbjct:   232 SFLAKAVQNPTFLSQFIQKQTDSN-MHVTEANKKRRL 267

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009408 "response to heat" evidence=IEP;RCA

TAIR|locus:2170832 HSFA6A "AT5G43840" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 75/188 (39%), Positives = 107/188 (56%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
             GF+K+D +RWEFANE FL G++HLLK IKRR+  SQ+  Q             L+GE+  
Sbjct:    79 GFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQ------------SLEGEIHE 126

Query:    63 LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
             L+RDR  L  E+VRLR+ Q+  +  L  ME++L  TE KQ+ MM FL K +K PSF Q L
Sbjct:   127 LRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKKIKKPSFLQSL 186

Query:   123 AQSNAHRRELGGVQTG-RKRRLTATPSMENLQETISVAP--VGLD----CGPVVDYTVQD 175
                   +R L G++   +K+ + ++  +E+  + +   P   G D    CG V DY   D
Sbjct:   187 -----RKRNLQGIKNREQKQEVISSHGVEDNGKFVKAEPEEYGDDIDDQCGGVFDYG--D 239

Query:   176 QNELTSME 183
             +  + SME
Sbjct:   240 ELHIASME 247

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=RCA

TAIR|locus:2077249 AT-HSFA7B "AT3G63350" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 66/158 (41%), Positives = 95/158 (60%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
             GFRK++ +RWEF NEGFL GQ+ LLK+IKRR   S        ++  E    G+  EL +
Sbjct:    88 GFRKIEAERWEFMNEGFLMGQRDLLKSIKRRTSSSSPPSLNYSQSQPEAHDPGV--ELPQ 145

Query:    63 LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
             L+ +R+VLM EI  LRQ +Q++R  + AME R+   EKKQ+ MM+FL +A++NPS  QQ+
Sbjct:   146 LREERHVLMMEISTLRQEEQRARGYVQAMEQRINGAEKKQRHMMSFLRRAVENPSLLQQI 205

Query:   123 AQSNAHRRELGGV-QTGRKRRLTATPSMENLQETISVA 159
              +    R E   + Q G    L     +E+L E  ++A
Sbjct:   206 FEQKRDREEAAMIDQAG----LIKMEEVEHLSELEALA 239

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP;RCA

GO:0009644 "response to high light intensity" evidence=IEP;RCA

GO:0006457 "protein folding" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0048445 "carpel morphogenesis" evidence=RCA

TAIR|locus:2083690 HSFA7A "AT3G51910" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 65/152 (42%), Positives = 95/152 (62%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELER 62
             GFRK++ +RWEFANE FL GQ+ LLK IKRR   + S      +AC E            
Sbjct:    89 GFRKIEAERWEFANEEFLLGQRQLLKNIKRRNPFTPSSSP-SHDACNE------------ 135

Query:    63 LKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQL 122
             L+R++ VLM EIV LRQ QQ ++  + AME R+  TE+KQ+QMM+FLA+A+++PSF  QL
Sbjct:   136 LRREKQVLMMEIVSLRQQQQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQL 195

Query:   123 AQSNAHR-RELGGVQTGRKRRLTATPSMENLQ 153
              +    + +EL   ++ +++R   + SM  L+
Sbjct:   196 LKQRDKKIKELEDNESAKRKR--GSSSMSELE 225

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP;RCA

GO:0009644 "response to high light intensity" evidence=IEP;RCA

GO:0032268 "regulation of cellular protein metabolic process" evidence=IEP

GO:0006457 "protein folding" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2144603 HSFA3 "AT5G03720" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.9e-23, P = 1.9e-23
 Identities = 72/205 (35%), Positives = 105/205 (51%)

Query:     3 GFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQ-YGLDGELE 61
             GFRK+D D+WEFANE FL G+KHLLK I RRR   QS Q          G    + GE+E
Sbjct:   115 GFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRS-PQSNQTCCSSTSQSQGSPTEVGGEIE 173

Query:    62 RLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQ 121
             +L+++R  LM E+V L+Q  + +   +  +  RL + E++Q+Q+++FLAK  +N  F ++
Sbjct:   174 KLRKERRALMEEMVELQQQSRGTARHVDTVNQRLKAAEQRQKQLLSFLAKLFQNRGFLER 233

Query:   122 LAQSNAHRRELGGVQTGRKRRLTATPSMENLQETISVAPVGLDCGPVVDYTVQDQNELTS 181
             L   N   +E GG     K R       +  Q++    P G   G VV Y   D   L  
Sbjct:   234 L--KNFKGKEKGGALGLEKARKKFIKHHQQPQDS----PTG---GEVVKYEADDWERLLM 284

Query:   182 METEIETFLSSPVDNESSSDIDNPN 206
              + E E   +  +   +SSD    N
Sbjct:   285 YDEETEN--TKGLGGMTSSDPKGKN 307

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IDA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP

GO:0009408 "response to heat" evidence=IEP;RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	279
pfam00447	96	pfam00447, HSF_DNA-bind, HSF-type DNA-binding	4e-11
smart00415	105	smart00415, HSF, heat shock factor	3e-10

>gnl|CDD|215924 pfam00447, HSF_DNA-bind, HSF-type DNA-binding

 Score = 58.3 bits (142), Expect = 4e-11
 Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 1  MQGFRKVDPDR--WEFANEGFLGGQKHLLKTIKRRR 34
          M GF KV  DR  WEFA+  F  GQK LL  IKRR+
Sbjct: 59 MYGFHKVKDDRNGWEFAHPNFKRGQKELLSKIKRRK 94

Length = 96

>gnl|CDD|214654 smart00415, HSF, heat shock factor

 Score = 55.8 bits (135), Expect = 3e-10
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 11/44 (25%)

Query: 1   MQGFRKVDP-----------DRWEFANEGFLGGQKHLLKTIKRR 33
           M GFRKVDP           D+WEFAN  F+ GQ  LL+ IKR+
Sbjct: 62  MYGFRKVDPEFQGILYNFTSDQWEFANPDFVRGQPELLRNIKRK 105

Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	279
KOG0627	304	consensus Heat shock transcription factor [Transcr	99.92
PF00447	103	HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR0	98.8
COG5169	282	HSF1 Heat shock transcription factor [Transcriptio	98.64
PF03310	121	Cauli_DNA-bind: Caulimovirus DNA-binding protein;	95.58
PF04340	225	DUF484: Protein of unknown function, DUF484; Inter	90.11
TIGR02449	65	conserved hypothetical protein TIGR02449. Members	89.66
PF11932	251	DUF3450: Protein of unknown function (DUF3450); In	85.33
PF12325	120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	85.08
PF10473	140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	84.71
PF06005	72	DUF904: Protein of unknown function (DUF904); Inte	83.27
PRK15422	79	septal ring assembly protein ZapB; Provisional	80.06

>KOG0627 consensus Heat shock transcription factor [Transcription]

Probab=99.92  E-value=1.6e-25  Score=207.97  Aligned_cols=126  Identities=38%  Similarity=0.638  Sum_probs=111.4

Q ss_pred             CCcccccC--CCceeeccCCccCChhhhHhhhhhccCCCcccc----cCCCc------cccccccCCchHHHHHHHHHHH
Q 023639            1 MQGFRKVD--PDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQ----QRGGE------ACLEVGQYGLDGELERLKRDRN   68 (279)
Q Consensus         1 tYGFRKVd--pdrWEFaNe~F~RGq~hLLknIkRRk~~s~~~~----~~~~~------~~~e~g~~~l~~Ele~Lkrd~~   68 (279)
                      |||||||+  +|+|||+|++|+||++|||++|+|||+......    .....      .++...+..+..++.+|+++++
T Consensus        72 ~YgFrKv~~~~~~wEF~n~~F~rg~~~LL~~I~rrk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  151 (304)
T KOG0627|consen   72 MYGFRKVDFKSDRWEFSNPCFVRGQKLLLKNIKRRKSASRIFQTKDSPKSFERQLNLYGFVKIRQLNLKESAKSLSKENE  151 (304)
T ss_pred             ccceeecCCCCCceeecChhHhcChHHHHHHHhhhccccCCcccccCcchhhhhhhHHHHhhcccccchhHHHHHHHHHH
Confidence            89999999  999999999999999999999999999854421    11111      2334456789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhH
Q 023639           69 VLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSN  126 (279)
Q Consensus        69 ~L~~El~~LRqqq~~~~~ql~~m~~Rl~~~E~kQqQm~sFLakal~nP~Fl~~L~~~~  126 (279)
                      +|+.|+++||+++..++.+++.+.+++..++++|++|+.|+++++.+|.|+.++.+..
T Consensus       152 ~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  209 (304)
T KOG0627|consen  152 VLQRELVELRQQQDALRATIQTSKRVVKSKETRNSLILSFLARDVQSPGFLNQAPQRQ  209 (304)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhhccccCchhhHHHHHhhHHHhhccCccchhcccchh
Confidence            9999999999999999999999999999999999999999999999999999988743

>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []

Probab=98.80  E-value=8.8e-10  Score=88.03  Aligned_cols=35  Identities=51%  Similarity=0.902  Sum_probs=27.6

Q ss_pred             CCcccccCCCc---------eeeccCCccCChhhhHhhhhhccC
Q 023639            1 MQGFRKVDPDR---------WEFANEGFLGGQKHLLKTIKRRRH   35 (279)
Q Consensus         1 tYGFRKVdpdr---------WEFaNe~F~RGq~hLLknIkRRk~   35 (279)
                      +|||+||.++.         |+|.||+|+||+++||.+|+||++
T Consensus        59 ~yGF~k~~~~~~~~~~~~~~~~f~h~~F~r~~~~lL~~I~r~~~  102 (103)
T PF00447_consen   59 MYGFKKVSSDSNQSSLSSNIWEFYHPNFRRGQPDLLSKIKRRKS  102 (103)
T ss_dssp             HTTEEECC-SSCTTSSTTTTEEEEETT-BTTBCCCTTTS---TT
T ss_pred             eeeeEEEecCccccccCCCCeEECCcCccCCCHHHHhhCccCCC
Confidence            59999998654         999999999999999999999975

Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....

>COG5169 HSF1 Heat shock transcription factor [Transcription]

Probab=98.64  E-value=1.7e-08  Score=95.05  Aligned_cols=81  Identities=31%  Similarity=0.475  Sum_probs=56.3

Q ss_pred             CCcccccC-C--------C-ceeeccCCccCChhhhHhhhhhccCCCcccccCC-Ccccc---cc-----ccCCchHHHH
Q 023639            1 MQGFRKVD-P--------D-RWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRG-GEACL---EV-----GQYGLDGELE   61 (279)
Q Consensus         1 tYGFRKVd-p--------d-rWEFaNe~F~RGq~hLLknIkRRk~~s~~~~~~~-~~~~~---e~-----g~~~l~~Ele   61 (279)
                      +|||+||- .        + .|||+|+.|++|..+||++|+|+|.++......+ +..+.   ++     .+..+..++.
T Consensus        70 ~YgFhKv~h~~~~~~~~n~~~wef~~~nF~~g~~~~L~~i~r~ka~~~~~~~~~~s~~~~~~~~~~~~i~~~~~~~~~~S  149 (282)
T COG5169          70 KYGFHKVSHKSGQRSYYNENVWEFGNKNFQLGMIELLKKIKRKKAPSNRVDSNNESKDAMMNIEVENIILPQSELYNSLS  149 (282)
T ss_pred             hcCcEeccCCcccccccchhheeecCchhccCcHHHHHHhhhhhcCcccccccCCCCccccchhhhhhhchhcccCcchh
Confidence            69999998 2        2 3999999999999999999999998865422222 11211   11     2334666777


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 023639           62 RLKRDRNVLMAEIVRLRQHQ   81 (279)
Q Consensus        62 ~Lkrd~~~L~~El~~LRqqq   81 (279)
                      +|+..+.+++..+..|+.-+
T Consensus       150 ~l~~~~~~~~~~~~~lk~~~  169 (282)
T COG5169         150 SLSNVNQTLLLYLNELKEYN  169 (282)
T ss_pred             HHhhhhHHHhhhhccccchh
Confidence            77777777777777666543

>PF03310 Cauli_DNA-bind: Caulimovirus DNA-binding protein; InterPro: IPR004986 The gene III product (P15) of cauliflower mosaic virus (CaMV) is a DNA binding protein in which the DNA binding activity is located on its C-terminal part

Probab=95.58  E-value=0.025  Score=47.81  Aligned_cols=62  Identities=24%  Similarity=0.371  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhHHhhhhc
Q 023639           68 NVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALKNPSFFQQLAQSNAHRREL  132 (279)
Q Consensus        68 ~~L~~El~~LRqqq~~~~~ql~~m~~Rl~~~E~kQqQm~sFLakal~nP~Fl~~L~~~~~~~~~~  132 (279)
                      ++...||..+++.+..+...+.+|.++++++++.+++|.++-||++++   |...+.+-.=++++
T Consensus         2 ~~~~kEi~~l~~~lk~~~~~i~ailek~~s~~~~~e~lEsiAAKIIkD---isdkIdkCeC~Kel   63 (121)
T PF03310_consen    2 ATIIKEISELIQELKKIESDIKAILEKLQSTEQDQENLESIAAKIIKD---ISDKIDKCECNKEL   63 (121)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHH---HHHHHHT-TTHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH---HHHHHHhchhhHHH
Confidence            567889999999999999999999999999999999999999999997   55556543223444

A family of related proteins is expressed by other members of the Caulimoviridae.; GO: 0003677 DNA binding; PDB: 3F6N_A 3K4T_D.

>PF04340 DUF484: Protein of unknown function, DUF484; InterPro: IPR007435 This family consists of several proteins of uncharacterised function

Probab=90.11  E-value=1.5  Score=39.49  Aligned_cols=78  Identities=18%  Similarity=0.282  Sum_probs=40.5

Q ss_pred             eccCCccCChhhhHhhhhhccCCCcccccCCCccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           14 FANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMED   93 (279)
Q Consensus        14 FaNe~F~RGq~hLLknIkRRk~~s~~~~~~~~~~~~e~g~~~l~~Ele~Lkrd~~~L~~El~~LRqqq~~~~~ql~~m~~   93 (279)
                      =+||+|....++||..|+=.    +   +.+ + .                  .+....-+.+||++.+..+.+|..|-+
T Consensus        16 ~~~PdFf~~~~~ll~~l~~p----h---~~~-~-a------------------vSL~erQ~~~LR~~~~~L~~~l~~Li~   68 (225)
T PF04340_consen   16 RQHPDFFERHPELLAELRLP----H---PSG-G-A------------------VSLVERQLERLRERNRQLEEQLEELIE   68 (225)
T ss_dssp             ----------------------------------H------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCcHHHHhCHHHHHHcCCC----C---CCC-C-c------------------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47999999999999999742    1   111 1 1                  233445566777777788888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCch
Q 023639           94 RLLSTEKKQQQMMTFLAKALKNPSF  118 (279)
Q Consensus        94 Rl~~~E~kQqQm~sFLakal~nP~F  118 (279)
                      .-+..|+.++++..+-.+++.-.++
T Consensus        69 ~Ar~Ne~~~~~~~~l~l~LL~a~sl   93 (225)
T PF04340_consen   69 NARENEAIFQRLHRLVLALLAARSL   93 (225)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC--SH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            9999999999999999999986655

; PDB: 3E98_B.

>TIGR02449 conserved hypothetical protein TIGR02449

Probab=89.66  E-value=1.2  Score=33.89  Aligned_cols=45  Identities=27%  Similarity=0.351  Sum_probs=31.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           56 LDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEK  100 (279)
Q Consensus        56 l~~Ele~Lkrd~~~L~~El~~LRqqq~~~~~ql~~m~~Rl~~~E~  100 (279)
                      +..|+..|+.....+..|-..|.++....+.++.+|-.||.+||+
T Consensus        19 L~~EN~~Lr~q~~~~~~ER~~L~ekne~Ar~rvEamI~RLk~leq   63 (65)
T TIGR02449        19 LKSENRLLRAQEKTWREERAQLLEKNEQARQKVEAMITRLKALEQ   63 (65)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            445566666666666666667777777777777888888877774

Members of this family are small proteins, typically 73 amino acids in length, with single copies in each of several Proteobacteria, including Xylella fastidiosa, Pseudomonas aeruginosa, and Xanthomonas campestris. The function is unknown.

>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=85.33  E-value=8.3  Score=35.31  Aligned_cols=60  Identities=17%  Similarity=0.323  Sum_probs=41.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 023639           55 GLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKALK  114 (279)
Q Consensus        55 ~l~~Ele~Lkrd~~~L~~El~~LRqqq~~~~~ql~~m~~Rl~~~E~kQqQm~sFLakal~  114 (279)
                      .+..+++.|+++.+.|...+.++.......+.++..+++++...+.-.+.+..++.+++.
T Consensus        53 ~L~~e~~~l~~e~e~L~~~~~~l~~~v~~q~~el~~L~~qi~~~~~~~~~l~p~m~~m~~  112 (251)
T PF11932_consen   53 ELLAEYRQLEREIENLEVYNEQLERQVASQEQELASLEQQIEQIEETRQELVPLMEQMID  112 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455666666666666666666666666666666777777777777777788887777665

However, they are found in an operon along with components of a TonB transport system (typified by Vibrio cholerae TonB2 [], and are predicted to be localized to the periplasmic space. Caution: the low-complexity nature of these sequences produces spurious BLAST hits to chromosome segregation ATPases (which are much longer in length and contain canonical Walker motifs). Accordingly, some members are misidentified as such.

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []

Probab=85.08  E-value=4  Score=34.34  Aligned_cols=58  Identities=26%  Similarity=0.468  Sum_probs=41.2

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           53 QYGLDGELERLKRDRNVLMAEIVRLRQHQQQ---SRDQLSAMEDRLLSTEKKQQQMMTFLA  110 (279)
Q Consensus        53 ~~~l~~Ele~Lkrd~~~L~~El~~LRqqq~~---~~~ql~~m~~Rl~~~E~kQqQm~sFLa  110 (279)
                      ...+..++.+|.+.+..|..||++|-.....   ...++..++..+..++.|.+.++-+|-
T Consensus        32 ~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~LellG   92 (120)
T PF12325_consen   32 LASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLLELLG   92 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457777778888888888888888877743   345666777777777777776666543

The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]

Probab=84.71  E-value=7.4  Score=33.66  Aligned_cols=58  Identities=22%  Similarity=0.340  Sum_probs=48.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           55 GLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLLSTEKKQQQMMTFLAKA  112 (279)
Q Consensus        55 ~l~~Ele~Lkrd~~~L~~El~~LRqqq~~~~~ql~~m~~Rl~~~E~kQqQm~sFLaka  112 (279)
                      .|..+++.+..+++.|..|+..+|.........++.+.+||..+|..+..+.++|..+
T Consensus        56 ~L~~el~~lt~el~~L~~EL~~l~sEk~~L~k~lq~~q~kv~eLE~~~~~~~~~l~~~  113 (140)
T PF10473_consen   56 TLEEELEELTSELNQLELELDTLRSEKENLDKELQKKQEKVSELESLNSSLENLLQEK  113 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            4777888888888888999999999999999999999999999998888777766543

There are several leucine-rich repeats along the sequence of LEK1 that are considered to be zippers, though they do not appear to be binding DNA directly in this instance []. ; GO: 0008134 transcription factor binding, 0042803 protein homodimerization activity, 0045502 dynein binding

>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation

Probab=83.27  E-value=5.9  Score=30.52  Aligned_cols=41  Identities=32%  Similarity=0.378  Sum_probs=18.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           56 LDGELERLKRDRNVLMAEIVRLRQHQQQSRDQLSAMEDRLL   96 (279)
Q Consensus        56 l~~Ele~Lkrd~~~L~~El~~LRqqq~~~~~ql~~m~~Rl~   96 (279)
                      |..|++.||.++..|..|...|+++.+..+..-.+...||.
T Consensus        23 Lq~e~eeLke~n~~L~~e~~~L~~en~~L~~e~~~~~~rl~   63 (72)
T PF06005_consen   23 LQMENEELKEKNNELKEENEELKEENEQLKQERNAWQERLR   63 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556666665444444444444333333333333333333

It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.; GO: 0000917 barrier septum formation, 0043093 cytokinesis by binary fission, 0005737 cytoplasm; PDB: 2JEE_A.

>PRK15422 septal ring assembly protein ZapB; Provisional

Probab=80.06  E-value=7.7  Score=30.76  Aligned_cols=21  Identities=38%  Similarity=0.491  Sum_probs=14.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHH
Q 023639           56 LDGELERLKRDRNVLMAEIVR   76 (279)
Q Consensus        56 l~~Ele~Lkrd~~~L~~El~~   76 (279)
                      |--||+.||..+..|..|+..
T Consensus        23 LqmEieELKekn~~L~~e~~~   43 (79)
T PRK15422         23 LQMEIEELKEKNNSLSQEVQN   43 (79)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            445677777777777776665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	279
1hks_A	106	Heat-shock transcription factor; transcription reg	9e-10
2ldu_A	125	Heat shock factor protein 1; structural genomics,	4e-09

>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A Length = 106

 Score = 53.9 bits (130), Expect = 9e-10
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 10/43 (23%)

Query: 1   MQGFRKV----------DPDRWEFANEGFLGGQKHLLKTIKRR 33
           M GF K+          D D  EF++  F      LL  IKR+
Sbjct: 64  MYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRK 106

>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 125

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 11/44 (25%)

Query: 1   MQGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRR 33
           M GFRKV           + D  EF +  FL GQ+ LL+ IKR+
Sbjct: 77  MYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRK 120

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	279
2jee_A	81	YIIU; FTSZ, septum, coiled-coil, cell division, ce	81.77

>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}

Probab=81.77  E-value=4.4  Score=31.07  Aligned_cols=26  Identities=31%  Similarity=0.451  Sum_probs=16.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHH
Q 023639           56 LDGELERLKRDRNVLMAEIVRLRQHQ   81 (279)
Q Consensus        56 l~~Ele~Lkrd~~~L~~El~~LRqqq   81 (279)
                      +.-|++.||.++..|..|...+|...
T Consensus        25 LqmEieELKekN~~L~~e~~e~~~~~   50 (81)
T 2jee_A           25 LQMEIEELKEKNNSLSQEVQNAQHQR   50 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            34477777777777777666644433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	279
d1hksa_	106	a.4.5.22 (A:) Heat-shock transcription factor {Dro	6e-08

>d1hksa_ a.4.5.22 (A:) Heat-shock transcription factor {Drosophila melanogaster [TaxId: 7227]} Length = 106

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Heat-shock transcription factor
domain: Heat-shock transcription factor
species: Drosophila melanogaster [TaxId: 7227]

 Score = 47.6 bits (113), Expect = 6e-08
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 2   QGFRKVDPDRWEFANEGFLGGQKHLLKTIKRR 33
            G  + D D  EF++  F      LL  IKR+
Sbjct: 75  NGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRK 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00