Citrus Sinensis ID: 023732

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHHEEEEcccEEEEEc
MAAAAVAGSLTAHDRRILTALNtgasslsfvGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFsivgdpskgffcsaqgystHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSfgndhrhlgvwcwtqtgrtgkaVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKAlnrwgyypliligswafgtinrihdfiepghkiFWLTFLDVGTAALMVNCNDHIFVLFFFGlsfteicv
maaaavagsltahdrRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
**********TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEIC*
************HDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRML********************ALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
**********TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
********SLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
SSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
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MAAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEICV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query278 2.2.26 [Sep-21-2011]
O04714326 G-protein coupled recepto yes no 0.917 0.782 0.857 1e-128
Q54MC6306 Latrophilin receptor-like yes no 0.492 0.447 0.275 8e-11
Q54U75369 Cyclic AMP receptor-like no no 0.730 0.550 0.252 2e-10
Q54WN6 515 Cyclic AMP receptor-like no no 0.442 0.238 0.297 5e-09
P34907 375 Cyclic AMP receptor 2 OS= no no 0.687 0.509 0.251 3e-08
P35352 490 Cyclic AMP receptor 3 OS= no no 0.780 0.442 0.240 1e-07
P13773 392 Cyclic AMP receptor 1 OS= no no 0.510 0.362 0.275 3e-07
Q9TX43 443 Cyclic AMP receptor 4 OS= no no 0.550 0.345 0.231 9e-07
Q6UUW6361 Cyclic AMP receptor-like no no 0.629 0.484 0.215 4e-05
>sp|O04714|GCR1_ARATH G-protein coupled receptor 1 OS=Arabidopsis thaliana GN=GCR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  457 bits (1177), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/259 (85%), Positives = 233/259 (89%), Gaps = 4/259 (1%)

Query: 2   AAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSD 61
           A     G LTA DR I+TA+NTGASSLSFVGS FIVLCYCLFKELRKFSFKLVF+LALSD
Sbjct: 3   AVLTAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLALSD 62

Query: 62  MLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAM 121
           MLCSFF IVGDPSKGF C AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLEAM
Sbjct: 63  MLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAM 122

Query: 122 FHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTY 181
           FHLYVWGTSLVVTV+RSFGN+H HLG WCWTQTG  GKAVHF+TFYAPLWGAILYNGFTY
Sbjct: 123 FHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGFTY 182

Query: 182 FQVIRMLNNATRVAVGMSDRAYQFD----MKALNRWGYYPLILIGSWAFGTINRIHDFIE 237
           FQVIRML NA R+AVGMSDR  QFD    +K LNRWGYYPLILIGSWAFGTINRIHDFIE
Sbjct: 183 FQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDFIE 242

Query: 238 PGHKIFWLTFLDVGTAALM 256
           PGHKIFWL+ LDVGTAALM
Sbjct: 243 PGHKIFWLSVLDVGTAALM 261
Together with GPA1, may regulate the cell cycle via a signaling cascade that uses phosphatidylinositol-specific phospholipase C (PI-PLC) as an effector and inositol 1,4,5-trisphosphate(IP(3)) as a second messenger. Acts as a negative regulator of GPA1-mediated abscisic acid (ABA) responses in guard cells, and together with GPA1 and GB1 during seed germination and early seedling development. Promotes PI-PLC activity and IP(3) accumulation. Involved in the blue light (BL) signaling. Together with GPA1 and ADT3, required for BL-mediated synthesis of phenylpyruvate and subsequently of phenylalanine (Phe), in etiolated seedlings. Probably involved in cytokinin signal transduction. Plays a positive role in gibberellin- (GA) and brassinosteroid- (BR) regulated seed germination, probably independently of an heterotrimeric G-protein. Mediates seed dormancy abolishion, and promotes seed germination and flowering.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54MC6|LRLA_DICDI Latrophilin receptor-like protein A OS=Dictyostelium discoideum GN=lrlA PE=3 SV=1 Back     alignment and function description
>sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 Back     alignment and function description
>sp|Q54WN6|CRLG_DICDI Cyclic AMP receptor-like protein G OS=Dictyostelium discoideum GN=crlG PE=3 SV=1 Back     alignment and function description
>sp|P34907|CAR2_DICDI Cyclic AMP receptor 2 OS=Dictyostelium discoideum GN=carB PE=2 SV=2 Back     alignment and function description
>sp|P35352|CAR3_DICDI Cyclic AMP receptor 3 OS=Dictyostelium discoideum GN=carC PE=2 SV=1 Back     alignment and function description
>sp|P13773|CAR1_DICDI Cyclic AMP receptor 1 OS=Dictyostelium discoideum GN=carA-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9TX43|CAR4_DICDI Cyclic AMP receptor 4 OS=Dictyostelium discoideum GN=carD PE=2 SV=2 Back     alignment and function description
>sp|Q6UUW6|CRLC_DICDI Cyclic AMP receptor-like protein C OS=Dictyostelium discoideum GN=crlC PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
312282219328 unnamed protein product [Thellungiella h 0.917 0.777 0.861 1e-127
225429712319 PREDICTED: G-protein coupled receptor 1 0.920 0.802 0.835 1e-126
15221138326 G-protein-coupled receptor 1 [Arabidopsi 0.917 0.782 0.857 1e-126
297852446326 G-protein-coupled receptor 1 [Arabidopsi 0.917 0.782 0.853 1e-126
2104224326 putative G protein coupled receptor [Ara 0.917 0.782 0.853 1e-126
20466810326 putative G protein-coupled receptor [Ara 0.917 0.782 0.853 1e-126
255556598319 Cyclic AMP receptor, putative [Ricinus c 0.920 0.802 0.850 1e-126
441433483319 putative G-protein-coupled receptor [Mal 0.902 0.786 0.835 1e-123
449447185318 PREDICTED: G-protein coupled receptor 1- 0.913 0.798 0.814 1e-122
356563948318 PREDICTED: G-protein coupled receptor 1- 0.913 0.798 0.848 1e-121
>gi|312282219|dbj|BAJ33975.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/259 (86%), Positives = 234/259 (90%), Gaps = 4/259 (1%)

Query: 2   AAAAVAGSLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSD 61
           A  A  G LTA DR I+TA+NTGASSLSFVGS FIVLCYCLFKELRKFSFKLVF+LALSD
Sbjct: 3   AVLAAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLALSD 62

Query: 62  MLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAM 121
           MLCSFF IVGDPSKGF C AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLEAM
Sbjct: 63  MLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAM 122

Query: 122 FHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGFTY 181
           FHLYVWGTSLVVTV+RSFGN+H HLG WCWTQTG  GKAVHF+TFYAPLWGAILYNGFTY
Sbjct: 123 FHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGFTY 182

Query: 182 FQVIRMLNNATRVAVGMSDRAYQFD----MKALNRWGYYPLILIGSWAFGTINRIHDFIE 237
           FQVIRML NA R+AVGMSDR  QFD    +K LNRWGYYPLILIGSWAFGTINRIHDFIE
Sbjct: 183 FQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDFIE 242

Query: 238 PGHKIFWLTFLDVGTAALM 256
           PGHKIFWL+ LDVGTAALM
Sbjct: 243 PGHKIFWLSALDVGTAALM 261

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225429712|ref|XP_002281957.1| PREDICTED: G-protein coupled receptor 1 [Vitis vinifera] gi|296081730|emb|CBI20735.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15221138|ref|NP_175261.1| G-protein-coupled receptor 1 [Arabidopsis thaliana] gi|75219002|sp|O04714.1|GCR1_ARATH RecName: Full=G-protein coupled receptor 1 gi|5733881|gb|AAD49769.1|AC007932_17 Identical to a putative G-protein-coupled receptor from Arabidopsis thaliana gb|U95143. EST gb|T04329 comes from this gene [Arabidopsis thaliana] gi|2072986|gb|AAC49961.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|2072988|gb|AAC49962.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|110736896|dbj|BAF00405.1| putative G-protein-coupled receptor [Arabidopsis thaliana] gi|332194149|gb|AEE32270.1| G-protein-coupled receptor 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297852446|ref|XP_002894104.1| G-protein-coupled receptor 1 [Arabidopsis lyrata subsp. lyrata] gi|297339946|gb|EFH70363.1| G-protein-coupled receptor 1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|2104224|emb|CAA72145.1| putative G protein coupled receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20466810|gb|AAM20722.1| putative G protein-coupled receptor [Arabidopsis thaliana] gi|23198212|gb|AAN15633.1| putative G protein-coupled receptor [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255556598|ref|XP_002519333.1| Cyclic AMP receptor, putative [Ricinus communis] gi|223541648|gb|EEF43197.1| Cyclic AMP receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|441433483|gb|AGC31663.1| putative G-protein-coupled receptor [Malus x domestica] Back     alignment and taxonomy information
>gi|449447185|ref|XP_004141349.1| PREDICTED: G-protein coupled receptor 1-like [Cucumis sativus] gi|449486726|ref|XP_004157382.1| PREDICTED: G-protein coupled receptor 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356563948|ref|XP_003550219.1| PREDICTED: G-protein coupled receptor 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
TAIR|locus:2007710326 GCR1 "G-protein-coupled recept 0.920 0.785 0.858 2.2e-121
DICTYBASE|DDB_G0280983369 crlA "G-protein-coupled recept 0.568 0.428 0.265 3.6e-13
UNIPROTKB|E1C737342 GPR157 "Uncharacterized protei 0.586 0.476 0.274 1.8e-12
UNIPROTKB|F1MUY8327 GPR157 "Uncharacterized protei 0.532 0.452 0.287 2e-12
DICTYBASE|DDB_G0286037306 lrlA "latrophilin receptor-lik 0.741 0.673 0.255 2.1e-12
MGI|MGI:2442046330 Gpr157 "G protein-coupled rece 0.589 0.496 0.286 2.1e-12
ZFIN|ZDB-GENE-070912-347349 si:dkey-100n23.5 "si:dkey-100n 0.816 0.650 0.233 4.8e-12
RGD|1311096330 Gpr157 "G protein-coupled rece 0.586 0.493 0.288 5.5e-12
DICTYBASE|DDB_G0277829 490 carC "cAMP receptor 3" [Dictyo 0.791 0.448 0.239 8.6e-12
UNIPROTKB|E7ENU8270 GPR157 "Probable G-protein-cou 0.589 0.607 0.286 1.2e-11
TAIR|locus:2007710 GCR1 "G-protein-coupled receptor 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
 Identities = 224/261 (85%), Positives = 236/261 (90%)

Query:     1 MAAAAVAGS-LTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLAL 59
             M+A   AG  LTA DR I+TA+NTGASSLSFVGS FIVLCYCLFKELRKFSFKLVF+LAL
Sbjct:     1 MSAVLTAGGGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRKFSFKLVFYLAL 60

Query:    60 SDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLE 119
             SDMLCSFF IVGDPSKGF C AQGY+THFFCVASFLWTTTIAFTLHRTVV+HKTDVEDLE
Sbjct:    61 SDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120

Query:   120 AMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFITFYAPLWGAILYNGF 179
             AMFHLYVWGTSLVVTV+RSFGN+H HLG WCWTQTG  GKAVHF+TFYAPLWGAILYNGF
Sbjct:   121 AMFHLYVWGTSLVVTVIRSFGNNHSHLGPWCWTQTGLKGKAVHFLTFYAPLWGAILYNGF 180

Query:   180 TYFQVIRMLNNATRVAVGMSDRAYQFD----MKALNRWGYYPLILIGSWAFGTINRIHDF 235
             TYFQVIRML NA R+AVGMSDR  QFD    +K LNRWGYYPLILIGSWAFGTINRIHDF
Sbjct:   181 TYFQVIRMLRNARRMAVGMSDRVDQFDNRAELKVLNRWGYYPLILIGSWAFGTINRIHDF 240

Query:   236 IEPGHKIFWLTFLDVGTAALM 256
             IEPGHKIFWL+ LDVGTAALM
Sbjct:   241 IEPGHKIFWLSVLDVGTAALM 261
GO:0004888 "transmembrane signaling receptor activity" evidence=IEA
GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0007166 "cell surface receptor signaling pathway" evidence=IEA
GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0030552 "cAMP binding" evidence=IEA
GO:0000278 "mitotic cell cycle" evidence=IDA
GO:0009908 "flower development" evidence=IMP
GO:0010231 "maintenance of seed dormancy" evidence=IMP
GO:0007202 "activation of phospholipase C activity" evidence=IMP
GO:0032960 "regulation of inositol trisphosphate biosynthetic process" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0044214 "fully spanning plasma membrane" evidence=NAS
GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP
GO:0009939 "positive regulation of gibberellic acid mediated signaling pathway" evidence=IMP
GO:0006571 "tyrosine biosynthetic process" evidence=IMP
GO:0009094 "L-phenylalanine biosynthetic process" evidence=IMP
GO:0010244 "response to low fluence blue light stimulus by blue low-fluence system" evidence=IMP
GO:0009845 "seed germination" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP
GO:0009785 "blue light signaling pathway" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0009735 "response to cytokinin stimulus" evidence=IMP
DICTYBASE|DDB_G0280983 crlA "G-protein-coupled receptor (GPCR) family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E1C737 GPR157 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MUY8 GPR157 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286037 lrlA "latrophilin receptor-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:2442046 Gpr157 "G protein-coupled receptor 157" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-347 si:dkey-100n23.5 "si:dkey-100n23.5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1311096 Gpr157 "G protein-coupled receptor 157" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277829 carC "cAMP receptor 3" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E7ENU8 GPR157 "Probable G-protein-coupled receptor 157" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04714GCR1_ARATHNo assigned EC number0.85710.91720.7822yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_104436.1
annotation not avaliable (326 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.4__549__AT2G26300.1
annotation not avaliable (383 aa)
    • • 0.754
fgenesh2_kg.5__364__AT3G26090.1
annotation not avaliable (459 aa)
      • 0.424

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
pfam05462305 pfam05462, Dicty_CAR, Slime mold cyclic AMP recept 3e-09
>gnl|CDD|147574 pfam05462, Dicty_CAR, Slime mold cyclic AMP receptor Back     alignment and domain information 
 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 29  SFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-----GDPSKGFFCSAQG 83
           S +G   +++ +   K LR    K++    L+ +L    S +          GF C    
Sbjct: 21  SIIGCFLVLIGFWRLKLLRNHITKVISCFCLTSLLKDLISTILTLTNSAQYNGFPCYLYA 80

Query: 84  YSTHFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDH 143
               +  +A +LWT  +AF+++  +V+ + + E  E  + L  WG  L+ T++    N  
Sbjct: 81  IVITYGSLACWLWTLCLAFSIYNLIVKREPEPEKFEKYYFLVCWGLPLISTIIMLSKNTI 140

Query: 144 RHLGVWCWTQTGRTGKAVHFITFYAP---LWG--AILY---NGFTYFQVIRMLNNATRVA 195
             +G WCW      G    F  FY P   +WG  AIL    + +TY QVIR         
Sbjct: 141 EPVGNWCWIGEQYVG--YRFGLFYGPFFIIWGTSAILVGLTSRYTY-QVIRN-------- 189

Query: 196 VGMSDR-----AYQFDMKALNRWGYYPLILIGSWAFGTINRI 232
             +SD       YQF  K +N    Y ++ +  W F  +NRI
Sbjct: 190 -SVSDNKDKHMTYQF--KLIN----YIIVFLVCWVFAVVNRI 224

This family consists of cyclic AMP receptor (CAR) proteins from slime molds. CAR proteins are responsible for controlling development in Dictyostelium discoideum. Length = 305

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 278
PF05462303 Dicty_CAR: Slime mold cyclic AMP receptor 100.0
KOG4219423 consensus G protein-coupled receptor [Signal trans 100.0
PHA03234338 DNA packaging protein UL33; Provisional 99.97
PHA02834323 chemokine receptor-like protein; Provisional 99.96
PHA03235409 DNA packaging protein UL33; Provisional 99.96
PHA02638417 CC chemokine receptor-like protein; Provisional 99.95
PF00001257 7tm_1: 7 transmembrane receptor (rhodopsin family) 99.95
PF02101405 Ocular_alb: Ocular albinism type 1 protein; InterP 99.94
KOG4193610 consensus G protein-coupled receptors [Signal tran 99.92
PHA03087335 G protein-coupled chemokine receptor-like protein; 99.92
PF00002242 7tm_2: 7 transmembrane receptor (Secretin family); 99.91
KOG4220 503 consensus Muscarinic acetylcholine receptor [Signa 99.9
PF11710201 Git3: G protein-coupled glucose receptor regulatin 99.84
KOG2087363 consensus Glycoprotein hormone receptor [Signal tr 99.8
KOG4564473 consensus Adenylate cyclase-coupled calcitonin rec 99.8
PF10320257 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep 99.57
PF01534328 Frizzled: Frizzled/Smoothened family membrane regi 99.51
KOG4289 2531 consensus Cadherin EGF LAG seven-pass G-type recep 99.49
PF10328274 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemorecept 99.11
PF05296303 TAS2R: Mammalian taste receptor protein (TAS2R); I 99.03
PF10324318 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemorecept 98.99
PF10323283 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemorecept 98.9
PF10317292 7TM_GPCR_Srd: Serpentine type 7TM GPCR chemorecept 98.82
PF1197076 Git3_C: G protein-coupled glucose receptor regulat 98.75
PF10321313 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemorecept 98.65
PF02076283 STE3: Pheromone A receptor; InterPro: IPR001499 G- 98.43
PF10292324 7TM_GPCR_Srab: Serpentine type 7TM GPCR receptor c 98.07
PF10327303 7TM_GPCR_Sri: Serpentine type 7TM GPCR chemorecept 97.75
PF02118275 Srg: Srg family chemoreceptor; InterPro: IPR000609 97.64
PF10319310 7TM_GPCR_Srj: Serpentine type 7TM GPCR chemorecept 97.47
PF10318302 7TM_GPCR_Srh: Serpentine type 7TM GPCR chemorecept 97.21
PF02117328 7TM_GPCR_Sra: Serpentine type 7TM GPCR chemorecept 96.85
PF04789305 DUF621: Protein of unknown function (DUF621); Inte 96.76
PF03402265 V1R: Vomeronasal organ pheromone receptor family, 96.33
KOG3577556 consensus Smoothened and related G-protein-coupled 95.86
PF10326307 7TM_GPCR_Str: Serpentine type 7TM GPCR chemorecept 95.35
PF02175236 7TM_GPCR_Srb: Serpentine type 7TM GPCR chemorecept 94.07
PF03125365 Sre: C. elegans Sre G protein-coupled chemorecepto 92.22
PF06681226 DUF1182: Protein of unknown function (DUF1182); In 90.39
PF10322307 7TM_GPCR_Sru: Serpentine type 7TM GPCR chemorecept 85.59
PF10316273 7TM_GPCR_Srbc: Serpentine type 7TM GPCR chemorecep 85.47
>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor Back     alignment and domain information 
Probab=100.00  E-value=2.2e-38  Score=271.89  Aligned_cols=250  Identities=36%  Similarity=0.652  Sum_probs=209.0

Q ss_pred             CHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhhHhh-----cCCCCCCcceehhHH
Q 023732           11 TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-----GDPSKGFFCSAQGYS   85 (278)
Q Consensus        11 ~~~~~~~l~~~~~~~~~lsl~g~~~vi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-----~~~~~~~~C~~~~~~   85 (278)
                      .++|.+++.++..+.+++|++|+++++++|...|++|++.+++++.++++|++..+..++     ..++++..|++|+++
T Consensus         2 ~~~~~~~~~~i~~~~s~lSllGclfiI~tf~~~k~~r~~~~rli~yl~~~~ll~~v~~~~~~~~~~~~~~s~lC~~Qafl   81 (303)
T PF05462_consen    2 VKQQIRTLYAIELVASVLSLLGCLFIIITFCLFKRLRKPINRLIFYLSIANLLTNVASMIMTLSPSAGENSFLCQFQAFL   81 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHhHH
Confidence            467889999999999999999999999999999999999999999999999998766543     224578899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHHHHHHHHHhHHHHHHHHHHhhcCCCCCCcceeeEeeCCCcchHHHHH
Q 023732           86 THFFCVASFLWTTTIAFTLHRTVVQHKTDVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAVHFIT  165 (278)
Q Consensus        86 ~~~~~~~s~~~~~~ia~~~y~~i~~~~~~~~~~~~~~~~~~W~~~~l~~~~~~~~~~y~~~~~~C~~~~~~~~~~~~~~~  165 (278)
                      .|++..++.+|+++||++.|+.++++..+.+|+++.+++++||+|++.+++++..+.||+.|.|||++.+.  ..+++..
T Consensus        82 iq~f~~as~lWt~~iA~nly~~~~~~~~~~~k~e~~Y~l~~wGiPli~a~i~l~~~~~g~~G~WCWI~~~~--~~~r~~l  159 (303)
T PF05462_consen   82 IQFFMLASFLWTLCIAFNLYLTFVKRYDELEKLEKYYHLVCWGIPLIPAVIPLIGNDYGPAGNWCWIKPEW--DVWRFAL  159 (303)
T ss_pred             HHHhhHHHHHHHHHHHHHhhheeEEcCccHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCceeecCCC--cchHHHH
Confidence            99999999999999999999999877656788889999999999999999999889999999999998775  4567889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCchhhhHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCchhHHH
Q 023732          166 FYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWL  245 (278)
Q Consensus       166 f~~P~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~~~Wlp~~i~~~~~~~~~~~~~~~l  245 (278)
                      |++|+++++..+.+.+....+...+..  ..+.++++++ +.|...++..||++|++||+|..++|+++..+.  .++++
T Consensus       160 fY~Pl~ii~~~~~ilv~i~~~~~y~~~--~~~~sd~~~~-~~~~~~kL~~Yp~ifiicw~fa~INRI~~~~~~--~~~~l  234 (303)
T PF05462_consen  160 FYIPLWIIIIISAILVGITMRYIYRVI--RNGVSDNKDK-HLKYQLKLVNYPLIFIICWIFATINRIYNFIGK--NPFWL  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--ccccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHH
Confidence            999998877666554444443333222  2344444432 344455788899999999999999999997753  35789


Q ss_pred             HHHHHhhhhhhhHHHHHHHHHH
Q 023732          246 TFLDVGTAALMVNCNDHIFVLF  267 (278)
Q Consensus       246 ~~~~~~l~~~qg~~n~iiy~~~  267 (278)
                      .+++..++++||++|+++|++.
T Consensus       235 ~~Lh~~~s~lqGf~nsivy~~n  256 (303)
T PF05462_consen  235 SVLHVGFSPLQGFFNSIVYGYN  256 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999853

>KOG4219 consensus G protein-coupled receptor [Signal transduction mechanisms] Back     alignment and domain information
>PHA03234 DNA packaging protein UL33; Provisional Back     alignment and domain information
>PHA02834 chemokine receptor-like protein; Provisional Back     alignment and domain information
>PHA03235 DNA packaging protein UL33; Provisional Back     alignment and domain information
>PHA02638 CC chemokine receptor-like protein; Provisional Back     alignment and domain information
>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes Back     alignment and domain information
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms] Back     alignment and domain information
>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional Back     alignment and domain information
>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG4220 consensus Muscarinic acetylcholine receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor Back     alignment and domain information
>KOG2087 consensus Glycoprotein hormone receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG4564 consensus Adenylate cyclase-coupled calcitonin receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ] Back     alignment and domain information
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms] Back     alignment and domain information
>PF10328 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemoreceptor Srx; InterPro: IPR019430 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF05296 TAS2R: Mammalian taste receptor protein (TAS2R); InterPro: IPR007960 This family consists of several forms of mammalian taste receptor proteins (TAS2Rs) Back     alignment and domain information
>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10323 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemoreceptor Srv; InterPro: IPR019426 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10317 7TM_GPCR_Srd: Serpentine type 7TM GPCR chemoreceptor Srd; InterPro: IPR019421 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF11970 Git3_C: G protein-coupled glucose receptor regulating Gpa2 C-term; InterPro: IPR022596 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor Back     alignment and domain information
>PF10321 7TM_GPCR_Srt: Serpentine type 7TM GPCR chemoreceptor Srt; InterPro: IPR019425 Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type [] Back     alignment and domain information
>PF02076 STE3: Pheromone A receptor; InterPro: IPR001499 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10292 7TM_GPCR_Srab: Serpentine type 7TM GPCR receptor class ab chemoreceptor; InterPro: IPR019408 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10327 7TM_GPCR_Sri: Serpentine type 7TM GPCR chemoreceptor Sri; InterPro: IPR019429 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02118 Srg: Srg family chemoreceptor; InterPro: IPR000609 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10319 7TM_GPCR_Srj: Serpentine type 7TM GPCR chemoreceptor Srj; InterPro: IPR019423 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10318 7TM_GPCR_Srh: Serpentine type 7TM GPCR chemoreceptor Srh; InterPro: IPR019422 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02117 7TM_GPCR_Sra: Serpentine type 7TM GPCR chemoreceptor Sra; InterPro: IPR000344 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF04789 DUF621: Protein of unknown function (DUF621); InterPro: IPR006874 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans, and is noted to have possible G-protein-coupled receptor-like activity Back     alignment and domain information
>PF03402 V1R: Vomeronasal organ pheromone receptor family, V1R; InterPro: IPR004072 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>KOG3577 consensus Smoothened and related G-protein-coupled receptors [Signal transduction mechanisms] Back     alignment and domain information
>PF10326 7TM_GPCR_Str: Serpentine type 7TM GPCR chemoreceptor Str; InterPro: IPR019428 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF02175 7TM_GPCR_Srb: Serpentine type 7TM GPCR chemoreceptor Srb; InterPro: IPR002184 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF03125 Sre: C Back     alignment and domain information
>PF06681 DUF1182: Protein of unknown function (DUF1182); InterPro: IPR010601 This family consists of several hypothetical proteins of around 360 residues in length and seems to be specific to Caenorhabditis elegans Back     alignment and domain information
>PF10322 7TM_GPCR_Sru: Serpentine type 7TM GPCR chemoreceptor Sru; InterPro: IPR003839 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information
>PF10316 7TM_GPCR_Srbc: Serpentine type 7TM GPCR chemoreceptor Srbc ; InterPro: IPR019420 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
4grv_A 510 Neurotensin receptor type 1, lysozyme chimera; G-p 99.97
2lnl_A296 C-X-C chemokine receptor type 1; G protein coupled 99.97
3uon_A467 Human M2 muscarinic acetylcholine, receptor T4 LY 99.97
2rh1_A500 Beta-2-adrenergic receptor/T4-lysozyme chimera; GP 99.97
3vw7_A 484 Proteinase-activated receptor 1, lysozyme; high re 99.97
4dkl_A 464 MU-type opioid receptor, lysozyme chimera; G-prote 99.97
4amj_A315 Beta-1 adrenergic receptor; membrane protein, 7TMR 99.97
3pbl_A 481 D(3) dopamine receptor, lysozyme chimera; structur 99.97
3rze_A452 Histamine H1 receptor, lysozyme chimera; structura 99.97
2ks9_A364 Substance-P receptor; water, autodock, NK1, neurop 99.97
3v2y_A 520 Sphingosine 1-phosphate receptor 1, lysozyme CHIM; 99.97
3eml_A 488 Human adenosine A2A receptor/T4 lysozyme chimera; 99.96
1u19_A349 Rhodopsin; G protein-coupled receptor, membrane pr 99.96
4eiy_A447 Adenosine receptor A2A/soluble cytochrome B562 CH; 99.96
2z73_A 448 Rhodopsin; visual pigment, GQ-type, G-protein coup 99.96
4ea3_A434 Fusion protein of nociceptin receptor and cytochr; 99.96
3odu_A 502 C-X-C chemokine receptor type 4, lysozyme chimera; 99.96
3sn6_R514 Lysozyme, beta-2 adrenergic receptor; seven transm 99.96
2ki9_A33 Cannabinoid receptor 2; GPCR, G-protein coupled re 96.93
1hll_A32 Alpha-2A adrenergic receptor; helix-linker-helix, 96.02
2koe_A40 Human cannabinoid receptor 1 - helix 7/8 peptide; 94.26
2lot_A64 Apelin receptor; membrane protein; NMR {Homo sapie 82.0
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus} Back     alignment and structure
Probab=99.97  E-value=1e-30  Score=241.83  Aligned_cols=172  Identities=16%  Similarity=0.167  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccc---cchhhHHHHHHHHHHHHHhhHhhc---------CCC--CCCcc
Q 023732           14 DRRILTALNTGASSLSFVGSGFIVLCYCLFKELR---KFSFKLVFFLALSDMLCSFFSIVG---------DPS--KGFFC   79 (278)
Q Consensus        14 ~~~~l~~~~~~~~~lsl~g~~~vi~~~~~~~~lr---~~~~~~i~~La~adll~~~~~~~~---------~~~--~~~~C   79 (278)
                      ....+.+++.++.++|++||+++++.+.+.|++|   +.+|.+++|||++|++.++..++.         ..|  |+..|
T Consensus        31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C  110 (510)
T 4grv_A           31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC  110 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence            4556778888899999999999999998777655   567899999999999988775542         122  67889


Q ss_pred             eehhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCh----hhHHHHHHHHHhHHHHHHHHHHhhcCC---C-C----CCc
Q 023732           80 SAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDV----EDLEAMFHLYVWGTSLVVTVVRSFGND---H-R----HLG  147 (278)
Q Consensus        80 ~~~~~~~~~~~~~s~~~~~~ia~~~y~~i~~~~~~~----~~~~~~~~~~~W~~~~l~~~~~~~~~~---y-~----~~~  147 (278)
                      ++.+++...+..+|.+.+++||+|||+++++|.+..    +++.+..++++|++++++++|++++.+   + .    +..
T Consensus       111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~  190 (510)
T 4grv_A          111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGG  190 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCc
Confidence            999999999999999999999999999999875432    233357788999999999998876421   1 1    122


Q ss_pred             ceeeEeeCCCc-chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023732          148 VWCWTQTGRTG-KAV----HFITFYAPLWGAILYNGFTYFQVIRMLN  189 (278)
Q Consensus       148 ~~C~~~~~~~~-~~~----~~~~f~~P~~~~~~~~~~~~~~i~~~~~  189 (278)
                      ..|....+... ..+    .+..|++|+.++.    ++|..+.++++
T Consensus       191 ~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~----~~Y~~I~~~l~  233 (510)
T 4grv_A          191 LVCTPIVDTATVKVVIQVNTFMSFLFPMLVIS----ILNTVIANKLT  233 (510)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHHTHHHHHHHH----HHHHHHHHHHH
T ss_pred             cccccccccchhhhhhhhhhhHHHhhhHHHHH----HHHHHHHHHHH
Confidence            35655443311 111    2335667777776    55666665554
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens} Back     alignment and structure
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Back     alignment and structure
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Back     alignment and structure
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens} Back     alignment and structure
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Back     alignment and structure
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Back     alignment and structure
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens} Back     alignment and structure
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Back     alignment and structure
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Back     alignment and structure
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A* Back     alignment and structure
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Back     alignment and structure
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Back     alignment and structure
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Back     alignment and structure
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Back     alignment and structure
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B* Back     alignment and structure
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A* Back     alignment and structure
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic} Back     alignment and structure
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A Back     alignment and structure
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens} Back     alignment and structure
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
d1u19a_348 Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} 99.95
>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=6.6e-27  Score=202.98  Aligned_cols=262  Identities=13%  Similarity=0.062  Sum_probs=182.5

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhhHhhc-------C--CCCCCcceeh
Q 023732           12 AHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVG-------D--PSKGFFCSAQ   82 (278)
Q Consensus        12 ~~~~~~l~~~~~~~~~lsl~g~~~vi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~~-------~--~~~~~~C~~~   82 (278)
                      +.+...++++..+++++|++||+++++.+.+.|++|+..|.++.|||++|++.++...+.       .  +.++..|+..
T Consensus        34 ~~~~~~~~~~~~ii~v~gi~gN~lvi~vi~~~k~lr~~~~~~l~nLaiaDll~~~~~~~~~~~~~~~~~~~~~~~~c~~~  113 (348)
T d1u19a_          34 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE  113 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHeehhhhccCCCCCHhHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccCchhhhhh
Confidence            334667788888899999999999999999999999999999999999999987665432       1  2367899999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCh---hhHHHHHHHHHhHHHHHHHHHHhhcCC-C--CCCcceeeEeeCC
Q 023732           83 GYSTHFFCVASFLWTTTIAFTLHRTVVQHKTDV---EDLEAMFHLYVWGTSLVVTVVRSFGND-H--RHLGVWCWTQTGR  156 (278)
Q Consensus        83 ~~~~~~~~~~s~~~~~~ia~~~y~~i~~~~~~~---~~~~~~~~~~~W~~~~l~~~~~~~~~~-y--~~~~~~C~~~~~~  156 (278)
                      ++....+..++.+.+.++++|||.++++|.++.   +++.......+|..++++..++..+.. .  ......|....+.
T Consensus       114 ~~~~~~~~~~s~~~l~~is~~R~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (348)
T d1u19a_         114 GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYT  193 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSC
T ss_pred             hhccccceeeecchhhhhhcccceeeeccccccccccccccccceeeehhhhheecccccccceeccCCccccccccccc
Confidence            999999999999999999999999998775432   233345567788888888887765532 1  1223345433322


Q ss_pred             Cc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccCchhhhHhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 023732          157 TG-----KAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINR  231 (278)
Q Consensus       157 ~~-----~~~~~~~f~~P~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~~~Wlp~~i~~  231 (278)
                      ..     ..+.+..+.+...+.......+|.++.+++++..+.. ...++++++++|..+.+..++++|++||+|+.+..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~  272 (348)
T d1u19a_         194 PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ-QESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVA  272 (348)
T ss_dssp             CCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSS-CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-chhhhhHHHHhhHhheEEEeehHHHHHhhHHHhhh
Confidence            11     1122222222222233333466777766665533322 22223344556777778888899999999999988


Q ss_pred             HHHhhcCCc-hhHHHHHHHHhhhhhhhHHHHHHHHHHhhccccccc
Q 023732          232 IHDFIEPGH-KIFWLTFLDVGTAALMVNCNDHIFVLFFFGLSFTEI  276 (278)
Q Consensus       232 ~~~~~~~~~-~~~~l~~~~~~l~~~qg~~n~iiy~~~~~~~~~~~~  276 (278)
                      ++....++. ....+..+...+..+|+++||++|++  .+++|||.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiIY~~--~~~~fR~~  316 (348)
T d1u19a_         273 FYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIM--MNKQFRNC  316 (348)
T ss_dssp             HHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHH--TCHHHHHH
T ss_pred             heeeccCCccccHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence            876554333 34456667788899999999999999  45666653