Citrus Sinensis ID: 023813

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
Protein Sequence
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHccHHHHHHHHHHHHHHcccccEEEcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSyplatlallplplifrntttvvpsfKFSILSRIILLSFIGVLSQIFgytgiacssptlssaisnltpaFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPlclfaepdlslwrlkpdVALVSIVYSaflgpsfntIIHTWglrlkgpvyiAIFKPLSVVIAAITGIIFLgdtlhlgr
Flexible Loop (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLgdtlhlgr
Low Complexity Region (SEG)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYplatlallplplIFRNTTTVVPsfkfsilsriillsfiGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Disordered region (IsUnstruct)
*****FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH***
Disordered Region (DISOPRED)
***********LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG*
Disordered Region (DISEMBL)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Disordered Region (DISPRO)
***RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLGR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	277	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.981	0.739	0.509	9e-79
F4KHA8	370	WAT1-related protein At5g	no	no	0.974	0.729	0.526	4e-78
Q94JU2	367	WAT1-related protein At3g	no	no	0.989	0.746	0.483	5e-65
F4JK59	347	WAT1-related protein At4g	no	no	0.981	0.783	0.505	4e-64
Q945L4	339	WAT1-related protein At5g	no	no	0.960	0.784	0.425	3e-53
Q56X95	355	WAT1-related protein At3g	no	no	0.963	0.752	0.407	5e-47
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.963	0.741	0.421	8e-47
Q9LRS5	353	WAT1-related protein At3g	no	no	0.963	0.756	0.404	1e-45
F4IYZ0	358	WAT1-related protein At3g	no	no	0.963	0.745	0.404	6e-42
F4I5D5	375	WAT1-related protein At1g	no	no	0.996	0.736	0.282	4e-30

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  293 bits (750), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 206/308 (66%), Gaps = 36/308 (11%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 12  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSIS----------------------------------- 148
           FRME++ LR+ +TQAKIIG ++SIS                                   
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 190

Query: 149 VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
            S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE +
Sbjct: 191 ESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESN 250

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
           L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G IF
Sbjct: 251 LTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIF 310

Query: 269 LGDTLHLG 276
           LGD LHLG
Sbjct: 311 LGDALHLG 318

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  291 bits (745), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 161/306 (52%), Positives = 206/306 (67%), Gaps = 36/306 (11%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSIS-----------------------------------VS 150
           ME++ LR+ +TQAKIIGT+VSIS                                    S
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDS 193

Query: 151 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLS 210
           +W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL+
Sbjct: 194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLN 253

Query: 211 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 270
            + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FLG
Sbjct: 254 SFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLG 313

Query: 271 DTLHLG 276
           D L+LG
Sbjct: 314 DALYLG 319

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  248 bits (632), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/306 (48%), Positives = 193/306 (63%), Gaps = 32/306 (10%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLP-LP 59
           M R+ F RE L ++A V +EC  VGLNTLFKAA  KG+S++VF+ YSY LA L LLP L 
Sbjct: 1   MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLF 60

Query: 60  LIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFT 119
             FR+ T  +P   FSIL +I+LL  IG  S I GYTGI  SSPTL+SAISNLTPAFTF 
Sbjct: 61  CSFRSRT--LPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFL 118

Query: 120 LAVLFRMEKLALRTLSTQAKIIGTMVSI--------------------SVS--------N 151
           LAV+FRME ++ +  S+ AK++GT+VSI                    SVS        N
Sbjct: 119 LAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNPN 178

Query: 152 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAE-PDLS 210
           W+ G   LA + F + +W I+ TQI+  YPAE  V   Y++  +     + LF E  DL 
Sbjct: 179 WILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLG 238

Query: 211 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 270
            W++KP++ALVSIV S   G   N  IHTW LR+KGP+++A+FKPLS+ IA   G+IFL 
Sbjct: 239 AWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLR 298

Query: 271 DTLHLG 276
           D+L++G
Sbjct: 299 DSLYIG 304

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  244 bits (624), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/295 (50%), Positives = 196/295 (66%), Gaps = 23/295 (7%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A +A+ECTTVG + L+KAA  +G S+YVFV Y+Y  ATL LL L LIF 
Sbjct: 9   KYFKRDVVPFTAMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFG 68

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            + ++ P+ K S+  +I LL+ +G+ S++ G  GI  SSPTLSSAISNLTPAFTF LA+ 
Sbjct: 69  RSRSL-PTAKSSLFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIF 127

Query: 124 FRMEKLALRTLSTQAKIIGTMVSIS----------------------VSNWVTGGFLLAA 161
           FRME++ LR+ +TQAKIIGT+VSIS                       S+W+ GG LL  
Sbjct: 128 FRMEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSFESSWIIGGLLLGL 187

Query: 162 QCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALV 221
           Q  LLS+W IL T I+ IYP E+ V F YNL A +I+  +CL  E DL+ W+LKP  +L 
Sbjct: 188 QFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLA 247

Query: 222 SIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 276
           S++YS     S  ++IHTWGL +KGPVYI++FKPLS+ IA     IFLGDTLHLG
Sbjct: 248 SVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLG 302

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  208 bits (530), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/287 (42%), Positives = 181/287 (63%), Gaps = 21/287 (7%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLI-FRNTT 66
           R+  +L+A V  E + VG+NTL KAA SKGLS +V + YSY   +L LLPL    FR+ +
Sbjct: 9   RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRS 68

Query: 67  TVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRM 126
             +P   FSIL  + +L  I    QI GY GI  SSPTLSSA+SN+ PAFTF LAV+FRM
Sbjct: 69  --LPPLTFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRM 126

Query: 127 EKLALRTLSTQAKIIGTMVSI----------------SVSNWVTGGFLLAAQCFLLSIWS 170
           E ++L   S+ AK++GT++SI                S S+W+ GG LLA Q  L+S+  
Sbjct: 127 ENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLMSSHSDWIIGGGLLALQYILVSVSY 186

Query: 171 ILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLWRLKPDVALVSIVYSAFL 229
           +++   +  YP+ ++V  ++N+  AV+   + L AE D    W ++ D+ L+++V +  L
Sbjct: 187 LVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGIL 246

Query: 230 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 276
              +  +IHTW +  KGPVY+++FKPLS++IAA++  IFLG++L+LG
Sbjct: 247 NSGY-YVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLG 292

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  187 bits (476), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 177/304 (58%), Gaps = 37/304 (12%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           R+A+LL+A +A E   V +NTLFKAA SKGL+ Y F+ YSY + ++ LLP   IF   + 
Sbjct: 9   RDAVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLP-SHIFSYRSR 67

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +PS   SIL +I +L  +G    I G+ GI  S+PTL+SAISN+ PA TF LA++FRME
Sbjct: 68  SLPSLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRME 127

Query: 128 KLALRTLSTQAKIIGTMVSI----------------------------------SVSNWV 153
           K + +  S+ AK++GT+VS+                                  S S+W+
Sbjct: 128 KASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDWI 187

Query: 154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLW 212
            GG LLA +  L+ +  IL   I+ +YPA   V+F Y L A+++   + + AE +  S+W
Sbjct: 188 IGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIW 247

Query: 213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
            +  D+ LV IV      P +  I H W +R KGPVY+AIF+PLS++IA I G IFLGD+
Sbjct: 248 IIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDS 306

Query: 273 LHLG 276
            +LG
Sbjct: 307 FYLG 310

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  187 bits (474), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/304 (42%), Positives = 187/304 (61%), Gaps = 37/304 (12%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A + VE + VG++TLFK A SKGL+ Y F+ YSY LA+L LLP  L F N ++
Sbjct: 13  REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPS-LFFTNRSS 71

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I GY GI  SSPTL+SAI+N+TPA TF LA++FRME
Sbjct: 72  SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRME 131

Query: 128 KLALRTLSTQAKIIGTMVSI----------------------------------SVSNWV 153
           K++ +  S+ AK++GT++S+                                  S S+W+
Sbjct: 132 KVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWL 191

Query: 154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLW 212
            GG LL  Q   +S+  IL   I+++YPA   V+FLY +  +++   + L  E +  S+W
Sbjct: 192 IGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVW 251

Query: 213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
            +  D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA + G IFL D+
Sbjct: 252 IIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS 310

Query: 273 LHLG 276
           L+LG
Sbjct: 311 LYLG 314

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/304 (40%), Positives = 183/304 (60%), Gaps = 37/304 (12%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E   VG++TLFK A SKGL+ Y F+ YSY LA+L LLP    F + + 
Sbjct: 10  REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLF-FTDRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL  +G +  I GY GI  SSPTL+SAISN+TPA TF LA++FRME
Sbjct: 69  SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSI----------------------------------SVSNWV 153
           K++ +  S+ AK++GT++S+                                  S S+W+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWL 188

Query: 154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLW 212
            GG LL  +   +S+  IL  +I++ YPA   V+FLY +  +++   + L  E +  S+W
Sbjct: 189 IGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVW 248

Query: 213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
            ++ D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA +   +FL D+
Sbjct: 249 IIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDS 307

Query: 273 LHLG 276
           L+LG
Sbjct: 308 LYLG 311

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  171 bits (433), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/304 (40%), Positives = 178/304 (58%), Gaps = 37/304 (12%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E + VGL+TLFK A SKGL+ Y F++YSY LA+L LLP    F N + 
Sbjct: 10  REAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLF-FTNRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I G  GI  S+PTL+SAI N+ PA TF LAV+FRME
Sbjct: 69  SLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSI----------------------------------SVSNWV 153
           K++ +  S+ AK++GT++S+                                  S S+W+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWL 188

Query: 154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLW 212
            GG +L  Q   +S+  IL T I+  YP    V+ LY L  +++   + L  E +  S+W
Sbjct: 189 IGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIW 248

Query: 213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
            +  D+ L +IV +  +  S   +IH+W +R K P+Y+AIFKPLS++IA + G IFL D+
Sbjct: 249 IIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDS 307

Query: 273 LHLG 276
           L+LG
Sbjct: 308 LYLG 311

Arabidopsis thaliana (taxid: 3702)

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 39/315 (12%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL 60
           ME +    E +   A   +E  T+ L  + K A + G+S +VFV Y+    ++ LLP   
Sbjct: 1   MEVKVRRDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSF 60

Query: 61  IF-RNTTTVVPSFKFSILSRIILLSFIGV-LSQIFGYTGIACSSPTLSSAISNLTPAFTF 118
           +F RN  T    F + +L R+  L F G+ + Q   + G+  SSP +  A+    P+F+F
Sbjct: 61  LFHRNERTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSF 120

Query: 119 TLAVLFRMEKLALRTLSTQAKIIGTMVSIS------------------------------ 148
            L+++    KL  R  ST+AK++GT+VS+S                              
Sbjct: 121 LLSIILGRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPK 180

Query: 149 -------VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPL 201
                    NW  G   LA   F +S+++++ T  +  YP  + VA  Y++   +  +  
Sbjct: 181 LLVYYNLPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLF 240

Query: 202 CLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIA 261
            LF E DLS W+++P+  L  I+ +   G    T +H    ++KGP Y+ +FKP  +  A
Sbjct: 241 SLFMERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWA 300

Query: 262 AITGIIFLGDTLHLG 276
            + G  F  ++LH G
Sbjct: 301 TLFGTSFFVNSLHYG 315

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
42568214	368	nodulin MtN21 /EamA-like transporter fam	0.981	0.739	0.509	5e-77
334188088	382	nodulin MtN21 /EamA-like transporter fam	0.981	0.712	0.509	8e-77
15242612	370	nodulin MtN21 /EamA-like transporter fam	0.974	0.729	0.526	2e-76
297801562	367	hypothetical protein ARALYDRAFT_330483 [	0.971	0.732	0.527	2e-75
10177510	346	nodulin-like protein [Arabidopsis thalia	0.935	0.748	0.535	5e-75
297801560	368	nodulin MtN21 family protein [Arabidopsi	0.981	0.739	0.512	7e-74
225452524	359	PREDICTED: auxin-induced protein 5NG4 [V	0.996	0.768	0.483	4e-72
296087698	344	unnamed protein product [Vitis vinifera]	0.938	0.755	0.503	6e-72
225452526	360	PREDICTED: auxin-induced protein 5NG4 [V	0.992	0.763	0.469	4e-70
449449196	377	PREDICTED: auxin-induced protein 5NG4-li	0.981	0.721	0.480	5e-70

>gi|42568214|ref|NP_198840.2| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|10177511|dbj|BAB10905.1| nodulin-like protein [Arabidopsis thaliana] gi|30725298|gb|AAP37671.1| At5g40240 [Arabidopsis thaliana] gi|110743630|dbj|BAE99652.1| hypothetical protein [Arabidopsis thaliana] gi|332007140|gb|AED94523.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  293 bits (750), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 206/308 (66%), Gaps = 36/308 (11%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 12  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSIS----------------------------------- 148
           FRME++ LR+ +TQAKIIG ++SIS                                   
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 190

Query: 149 VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
            S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE +
Sbjct: 191 ESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESN 250

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
           L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G IF
Sbjct: 251 LTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIF 310

Query: 269 LGDTLHLG 276
           LGD LHLG
Sbjct: 311 LGDALHLG 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188088|ref|NP_001190441.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007141|gb|AED94524.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  293 bits (749), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 206/308 (66%), Gaps = 36/308 (11%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           + F R+ +  +A  AVEC TVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL +IF 
Sbjct: 26  KYFTRDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFG 85

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + P+ K  +  +I LL  +G +SQI G  GIA SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 86  RSRRL-PAAKSPLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVI 144

Query: 124 FRMEKLALRTLSTQAKIIGTMVSIS----------------------------------- 148
           FRME++ LR+ +TQAKIIG ++SIS                                   
Sbjct: 145 FRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSI 204

Query: 149 VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
            S+W+ GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+CLFAE +
Sbjct: 205 ESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESN 264

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
           L+ W LKPD++L +I+YS      F+ + HTWGL LKGPVYI++F+PLS+ IA   G IF
Sbjct: 265 LTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIF 324

Query: 269 LGDTLHLG 276
           LGD LHLG
Sbjct: 325 LGDALHLG 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242612|ref|NP_198839.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007139|gb|AED94522.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/306 (52%), Positives = 206/306 (67%), Gaps = 36/306 (11%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSIS-----------------------------------VS 150
           ME++ LR+ +TQAKIIGT+VSIS                                    S
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDS 193

Query: 151 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLS 210
           +W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL+
Sbjct: 194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLN 253

Query: 211 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 270
            + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FLG
Sbjct: 254 SFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLG 313

Query: 271 DTLHLG 276
           D L+LG
Sbjct: 314 DALYLG 319

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801562|ref|XP_002868665.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata] gi|297314501|gb|EFH44924.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/305 (52%), Positives = 204/305 (66%), Gaps = 36/305 (11%)

Query: 6   FFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNT 65
           F R+ +  +A VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y  ATL LLPL LIF  +
Sbjct: 15  FCRDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVGATLVLLPLSLIFGRS 74

Query: 66  TTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFR 125
             + PS K  +   I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FR
Sbjct: 75  KRL-PSAKTPVFFYIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 126 MEKLALRTLSTQAKIIGTMVSIS-----------------------------------VS 150
           ME++ LR+ +TQAKIIGT+VSIS                                    S
Sbjct: 134 MEQVVLRSSATQAKIIGTIVSISGALVVVLYKGPKVLTDATLTPPSPTISLYQHLTSFDS 193

Query: 151 NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLS 210
           +W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL+
Sbjct: 194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLT 253

Query: 211 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLG 270
            + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G+IFLG
Sbjct: 254 SFVLKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVIFLG 313

Query: 271 DTLHL 275
           D L+L
Sbjct: 314 DALYL 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177510|dbj|BAB10904.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  286 bits (733), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 158/295 (53%), Positives = 200/295 (67%), Gaps = 36/295 (12%)

Query: 17  VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSI 76
           VAVEC TVG NTLFKAA  +GLS+YVFV Y+Y +ATL LLPL LIF  +  + PS K  +
Sbjct: 2   VAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRL-PSAKTPV 60

Query: 77  LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST 136
              I LL+ +G +S I G  GI  SSPTL+SAISNLTPAFTFTLAV+FRME++ LR+ +T
Sbjct: 61  FFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSAT 120

Query: 137 QAKIIGTMVSIS-----------------------------------VSNWVTGGFLLAA 161
           QAKIIGT+VSIS                                    S+W+ GG LLA 
Sbjct: 121 QAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLLAT 180

Query: 162 QCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALV 221
           Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLFAE DL+ + LKP V+L 
Sbjct: 181 QYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSLA 240

Query: 222 SIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 276
           S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   G++FLGD L+LG
Sbjct: 241 SVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLG 295

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801560|ref|XP_002868664.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314500|gb|EFH44923.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  283 bits (723), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 158/308 (51%), Positives = 204/308 (66%), Gaps = 36/308 (11%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           R F R+ +  +A  AVECTTVG NTLFKAA  +GLS+YVFV YSY ++TL LLPL LIF 
Sbjct: 12  RYFTRDVVPFAAMFAVECTTVGSNTLFKAATIRGLSFYVFVFYSYVVSTLLLLPLSLIFG 71

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            +  + PS K     +I LL  +G +SQI G  GI  SSPTL+SAISNLTPAFTFTLAV+
Sbjct: 72  RSRRL-PSAKSPFFFKIFLLGLVGFMSQIAGCKGIEYSSPTLASAISNLTPAFTFTLAVI 130

Query: 124 FRMEKLALRTLSTQAKIIGTMVSIS----------------------------------- 148
           FRME++ LR+ +TQAKIIG ++SIS                                   
Sbjct: 131 FRMEQVRLRSSATQAKIIGAILSISGALVILLYKGPQVLAAASFTPLSPTISLHQHLASL 190

Query: 149 VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
            S W  GG LLA+Q FL+S+W IL T+++ +YP E+ V F YNLFA +I+VP+C+FAE +
Sbjct: 191 ESKWTIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCIFAESN 250

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
           L+ W LKPD++L +I+YS      F+ + HTWGL +KGPVYI++F+PLS+ IA   G IF
Sbjct: 251 LTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHMKGPVYISLFRPLSIAIAVAMGAIF 310

Query: 269 LGDTLHLG 276
           LGD+LHLG
Sbjct: 311 LGDSLHLG 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452524|ref|XP_002279776.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 149/308 (48%), Positives = 195/308 (63%), Gaps = 32/308 (10%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL 60
           M      R+ +     V VE T V LN LFK+A S+G+S YVF+ YSY +ATL L PL  
Sbjct: 1   MGDGHCLRDMVPFLGMVTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLLF 60

Query: 61  IFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTL 120
           IF     ++P FKFS+L +I  L FIG L++I  Y GI  SSPTL+S I NLTPA TF L
Sbjct: 61  IFNGKRLLLPPFKFSLLCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFML 120

Query: 121 AVLFRMEKLALRTLSTQAKIIGTMVSISVS------------------------------ 150
           A+ FRMEKLALR+LS+ AKI GT+ SIS +                              
Sbjct: 121 AIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQLTSTSSPLQFISLHQPLNSQ 180

Query: 151 --NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
              WV GG LL A+  L+SIW I+  Q++ +YP EL+V FL NL   +I+ P+CL AE +
Sbjct: 181 QMKWVIGGLLLVAEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLIAEKN 240

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
           LS+WR++ D+AL +IV+SAF G +F  ++ TW +RLKGPVY+A+F PLS+VIA   G++F
Sbjct: 241 LSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGVMF 300

Query: 269 LGDTLHLG 276
           LGDTL+LG
Sbjct: 301 LGDTLYLG 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087698|emb|CBI34954.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (707), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/292 (50%), Positives = 191/292 (65%), Gaps = 32/292 (10%)

Query: 17  VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSI 76
           V VE T V LN LFK+A S+G+S YVF+ YSY +ATL L PL  IF     ++P FKFS+
Sbjct: 2   VTVEATNVVLNVLFKSATSRGMSVYVFIVYSYAVATLILFPLLFIFNGKRLLLPPFKFSL 61

Query: 77  LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST 136
           L +I  L FIG L++I  Y GI  SSPTL+S I NLTPA TF LA+ FRMEKLALR+LS+
Sbjct: 62  LCKICSLGFIGFLAEIVAYKGIDYSSPTLASVIGNLTPALTFMLAIFFRMEKLALRSLSS 121

Query: 137 QAKIIGTMVSISVS--------------------------------NWVTGGFLLAAQCF 164
            AKI GT+ SIS +                                 WV GG LL A+  
Sbjct: 122 WAKITGTIASISGALIVVLYKGLQLTSTSSPLQFISLHQPLNSQQMKWVIGGLLLVAEDL 181

Query: 165 LLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIV 224
           L+SIW I+  Q++ +YP EL+V FL NL   +I+ P+CL AE +LS+WR++ D+AL +IV
Sbjct: 182 LVSIWYIVQAQVMEVYPEELVVVFLSNLCLTIISAPVCLIAEKNLSVWRVELDIALAAIV 241

Query: 225 YSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 276
           +SAF G +F  ++ TW +RLKGPVY+A+F PLS+VIA   G++FLGDTL+LG
Sbjct: 242 FSAFWGSAFGMVVPTWVVRLKGPVYVAMFNPLSIVIATAMGVMFLGDTLYLG 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452526|ref|XP_002279762.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/309 (46%), Positives = 192/309 (62%), Gaps = 34/309 (11%)

Query: 1   MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPL 60
           M R  ++R+ +  SA VA+ECT VGLNTL+KAA  +GL+Y+VFV Y+Y +A L LLP P 
Sbjct: 1   MRRGDWYRDVVSFSAMVALECTNVGLNTLYKAATLRGLNYHVFVVYAYGIAALVLLPSPF 60

Query: 61  IFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTL 120
           I  +   V+P   F +L +I +L  IG  SQ  GY GI  SSPTL+SAISNL PAFTF L
Sbjct: 61  I-THRRGVLPPLSFPVLCKIFVLGLIGCASQTMGYRGINISSPTLASAISNLVPAFTFIL 119

Query: 121 AVLFRMEKLALRTLSTQAKIIGTMVSIS-------------------------------- 148
           AV+FRMEKLALR+ S+QAKIIGT+VSIS                                
Sbjct: 120 AVIFRMEKLALRSSSSQAKIIGTIVSISGAFVVTLYKGPPIILTPSPSISLHQPPHPLRS 179

Query: 149 -VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEP 207
             S+W+ G   L+ + FL  +W I+   II  YP+E  V F YNLF +++A  + L  EP
Sbjct: 180 SESSWIIGALFLSVEYFLTPVWYIVQAHIIKEYPSEPTVVFFYNLFVSLLAAIVGLVTEP 239

Query: 208 DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII 267
           + S+W ++P +AL SIV S   G      IHTW +R+KGPVY+A+FKPL+++IA   G+ 
Sbjct: 240 NSSVWIVRPRIALASIVCSGIFGSFLGNTIHTWAIRMKGPVYVAMFKPLAIIIAVTMGVA 299

Query: 268 FLGDTLHLG 276
            LGD+L+LG
Sbjct: 300 LLGDSLYLG 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449196|ref|XP_004142351.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  270 bits (690), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/308 (48%), Positives = 190/308 (61%), Gaps = 36/308 (11%)

Query: 4   RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFR 63
           R      L   A +A+EC  VGLNTLFKAA + G+S++VFV YSY  A L LLP P I R
Sbjct: 6   RSLMEGVLPFPAMMAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISR 65

Query: 64  NTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL 123
            T+T +P   FSI S+I LL  IG  SQI GYTGI  SSPTL+SAISNL PAFTF LA++
Sbjct: 66  -TSTRLPPLNFSITSKIALLGLIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAII 124

Query: 124 FRMEKLALRTLSTQAKIIGTMVSI-----------------------------------S 148
           FRMEK+ L++ S+QAK++GT++SI                                   S
Sbjct: 125 FRMEKVVLKSNSSQAKVMGTIISISGAFVVTFYKGPRIIFSSSPTISLSLHHNSQQLSSS 184

Query: 149 VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD 208
            SNWV G  LL A+  L+ +W I+ T+I+  YP E  V F YNL  A+IA  + L  E D
Sbjct: 185 DSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVVFFYNLTVAIIAAFVGLILEKD 244

Query: 209 LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIF 268
            S W L+ + AL SI+ S   G   N  +HTW LRLKGPV++A+FKPLS+V+A + G++F
Sbjct: 245 PSAWILRQNTALASILCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLF 304

Query: 269 LGDTLHLG 276
           LGD+L+LG
Sbjct: 305 LGDSLYLG 312

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.548	0.414	0.477	1.6e-59
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.501	0.386	0.421	7.7e-50
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.472	0.369	0.428	5.3e-49
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.501	0.393	0.421	2.9e-48
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.501	0.388	0.414	1.6e-45
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.967	0.790	0.371	2.6e-40
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.678	0.508	0.447	5.5e-38
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.458	0.365	0.543	4e-35
TAIR|locus:2199327	356	UMAMIT23 "Usually multiple aci	0.447	0.348	0.306	6.8e-28
UNIPROTKB|Q6J163	410	Q6J163 "Auxin-induced protein	0.487	0.329	0.281	3e-26

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 74/155 (47%), Positives = 94/155 (60%)

Query:     1 MERRKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXX 60
             M R+ F RE L ++A V +EC  VGLNTLFKAA  KG+S++VF+ YSY            
Sbjct:     1 MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLF 60

Query:    61 I-FRNTTTVVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFT 119
               FR+ T  +P                G  S I GYTGI  SSPTL+SAISNLTPAFTF 
Sbjct:    61 CSFRSRT--LPPMNFSILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFL 118

Query:   120 LAVLFRMEKLALRTLSTQAKIIGTMVSISVSNWVT 154
             LAV+FRME ++ +  S+ AK++GT+VSI  +  VT
Sbjct:   119 LAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVT 153

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
 Identities = 59/140 (42%), Positives = 85/140 (60%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A + VE + VG++TLFK A SKGL+ Y F+ YSY             F N ++
Sbjct:    13 REAVFLTAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSL-FFTNRSS 71

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I GY GI  SSPTL+SAI+N+TPA TF LA++FRME
Sbjct:    72 SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRME 131

Query:   128 KLALRTLSTQAKIIGTMVSI 147
             K++ +  S+ AK++GT++S+
Sbjct:   132 KVSFKERSSLAKLMGTILSL 151

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
 Identities = 57/133 (42%), Positives = 83/133 (62%)

Query:   145 VSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLF 204
             +S S S+W+ GG LLA +  L+ +  IL   I+ +YPA   V+F Y L A+++   + + 
Sbjct:   179 LSSSNSDWIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIV 238

Query:   205 AEPDL-SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAI 263
             AE +  S+W +  D+ LV IV      P +  I H W +R KGPVY+AIF+PLS++IA I
Sbjct:   239 AEKNNPSIWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVI 297

Query:   264 TGIIFLGDTLHLG 276
              G IFLGD+ +LG
Sbjct:   298 MGAIFLGDSFYLG 310

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
 Identities = 59/140 (42%), Positives = 83/140 (59%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A +A E   VG++TLFK A SKGL+ Y F+ YSY             F + + 
Sbjct:    10 REAVFLTAMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSL-FFTDRSR 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I GY GI  SSPTL+SAISN+TPA TF LA++FRME
Sbjct:    69 SLPPLSLSILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRME 128

Query:   128 KLALRTLSTQAKIIGTMVSI 147
             K++ +  S+ AK++GT++S+
Sbjct:   129 KVSFKERSSVAKVMGTILSL 148

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
 Identities = 58/140 (41%), Positives = 82/140 (58%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             REA+ L+A +A E + VGL+TLFK A SKGL+ Y F++YSY             F N + 
Sbjct:    10 REAVFLTAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSL-FFTNRSR 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
              +P                G +  I G  GI  S+PTL+SAI N+ PA TF LAV+FRME
Sbjct:    69 SLPPLSASILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRME 128

Query:   128 KLALRTLSTQAKIIGTMVSI 147
             K++ +  S+ AK++GT++S+
Sbjct:   129 KVSFKERSSVAKVMGTILSL 148

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 106/285 (37%), Positives = 158/285 (55%)

Query:     8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYXXXXXXXXXXXXIFRNTTT 67
             R+  +L+A V  E + VG+NTL KAA SKGLS +V + YSY                + +
Sbjct:     9 RDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRS 68

Query:    68 VVPXXXXXXXXXXXXXXXXGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
             + P                    QI GY GI  SSPTLSSA+SN+ PAFTF LAV+FRME
Sbjct:    69 LPPLTFSILCNMGILGLIASAF-QILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRME 127

Query:   128 KLALRTLSTQAKIIGTMVSI----------------SVSNWVTGGFLLAAQCFLLSIWSI 171
              ++L   S+ AK++GT++SI                S S+W+ GG LLA Q  L+S+  +
Sbjct:   128 NISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLMSSHSDWIIGGGLLALQYILVSVSYL 187

Query:   172 LLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGP 231
             ++   +  YP+ ++V  ++N+  AV+   + L AE D     +      +  V +  +  
Sbjct:   188 VMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGILN 247

Query:   232 SFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG 276
             S   +IHTW +  KGPVY+++FKPLS++IAA++  IFLG++L+LG
Sbjct:   248 SGYYVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLG 292

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 86/192 (44%), Positives = 123/192 (64%)

Query:    89 LSQIFGYTGIAC-SSPTLSSAISNLTPAFTFTLAVLFRMEK-LALRTLSTQAKIIGTMVS 146
             L+ IF    I   SS T +  I  +       + +L++  K L   +L+  +  I     
Sbjct:   128 LAVIFRMEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQH 187

Query:   147 ISV--SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLF 204
             ++   S+W+ GG LLA Q  L+S+W IL T+++ +YP E+ V FLYNL A +I+ P+CLF
Sbjct:   188 LTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLF 247

Query:   205 AEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAIT 264
             AE DL+ + LKP V+L S++YS  L  SF ++IHTWGL LKGPVYI++FKPLS+VIA   
Sbjct:   248 AEKDLNSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAM 307

Query:   265 GIIFLGDTLHLG 276
             G++FLGD L+LG
Sbjct:   308 GVMFLGDALYLG 319

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 69/127 (54%), Positives = 88/127 (69%)

Query:   150 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL 209
             S+W+ GG LL  Q  LLS+W IL T I+ IYP E+ V F YNL A +I+  +CL  E DL
Sbjct:   176 SSWIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDL 235

Query:   210 SLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFL 269
             + W+LKP  +L S++YS     S  ++IHTWGL +KGPVYI++FKPLS+ IA     IFL
Sbjct:   236 NSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFL 295

Query:   270 GDTLHLG 276
             GDTLHLG
Sbjct:   296 GDTLHLG 302

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2199327 UMAMIT23 "Usually multiple acids move in and out Transporters 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
 Identities = 38/124 (30%), Positives = 67/124 (54%)

Query:   153 VTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLW 212
             + G  L+      +S+W +L  +I   +      A L N+   V+A+ + L  E DL  W
Sbjct:   178 ILGALLVFGGNISISLWFLLQVKISKQFGGPYWNATLMNMMGGVVAMLVALCWEHDLDEW 237

Query:   213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
             RL  ++ L++I Y+A L       ++ W +  +GP+++++F P+ +VI A+ G   L +T
Sbjct:   238 RLGWNIRLLTIAYAAILISGMVVAVNAWCIESRGPLFVSVFSPVGLVIVALVGSFLLDET 297

Query:   273 LHLG 276
             LHLG
Sbjct:   298 LHLG 301

GO:0016020 "membrane" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q6J163 Q6J163 "Auxin-induced protein 5NG4" [Pinus taeda (taxid:3352)]

 Score = 189 (71.6 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
 Identities = 38/135 (28%), Positives = 62/135 (45%)

Query:   142 GTMVSISVSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPL 201
             G  +S    NW  G   L   C   S W +L   ++  YPA L V      F  +  + +
Sbjct:   187 GNDLSAKSENWTLGCIYLLGNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLII 246

Query:   202 CLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIA 261
               F E DL  W++     L +I+Y+ F+       +  W +   GPV++A+++P+  +  
Sbjct:   247 AAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAV 306

Query:   262 AITGIIFLGDTLHLG 276
             AI   I LG+  +LG
Sbjct:   307 AIMASIILGEQFYLG 321

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006810 "transport" evidence=NAS

GO:0009734 "auxin mediated signaling pathway" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.5097	0.9819	0.7391	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	277
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	6e-62

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  199 bits (506), Expect = 6e-62
 Identities = 128/304 (42%), Positives = 185/304 (60%), Gaps = 37/304 (12%)

Query: 8   REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT 67
           REA+ L+A +A E + VG++TLFK A SKGL+ Y F+ YSY LA+L LLP  L F N + 
Sbjct: 10  REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLP-SLFFTNRSR 68

Query: 68  VVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRME 127
            +P    SILS+I LL F+G +  I GY GI  S+PTL+SAISN+TPA TF LA++FRME
Sbjct: 69  SLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRME 128

Query: 128 KLALRTLSTQAKIIGTMVSI----------------------------------SVSNWV 153
           K++ +  S+ AK++GT++S+                                  S S+W+
Sbjct: 129 KVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWL 188

Query: 154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD-LSLW 212
            GG LL  Q   +S+  IL   I++ YPA   V+FLY +  +++   + L  E +  S+W
Sbjct: 189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248

Query: 213 RLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDT 272
            +  D+ L++IV  A +  S   +IH+W +R KGP+Y+AIFKPLS++IA + G IFL D+
Sbjct: 249 IIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS 307

Query: 273 LHLG 276
           L+LG
Sbjct: 308 LYLG 311

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	277
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.94
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.91
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.85
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.85
COG2962	293	RarD Predicted permeases [General function predict	99.83
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.82
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.62
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.53
COG2510	140	Predicted membrane protein [Function unknown]	99.51
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.48
KOG2765	416	consensus Predicted membrane protein [Function unk	99.38
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.29
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.24
COG2510	140	Predicted membrane protein [Function unknown]	99.14
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.13
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.04
KOG2766	336	consensus Predicted membrane protein [Function unk	99.02
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.91
PRK11272	292	putative DMT superfamily transporter inner membran	98.91
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.78
PRK11689	295	aromatic amino acid exporter; Provisional	98.76
KOG1580	337	consensus UDP-galactose transporter related protei	98.66
PRK15430	296	putative chloramphenical resistance permease RarD;	98.65
PLN00411	358	nodulin MtN21 family protein; Provisional	98.64
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.63
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.55
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.54
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.48
KOG1581	327	consensus UDP-galactose transporter related protei	98.38
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.38
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.36
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.33
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.32
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.24
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.2
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.12
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.04
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.76
PRK13499	345	rhamnose-proton symporter; Provisional	97.75
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.71
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.67
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.66
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.62
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.6
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.45
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.43
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.41
COG2962	293	RarD Predicted permeases [General function predict	97.4
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.25
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.21
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.12
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.72
KOG1582	367	consensus UDP-galactose transporter related protei	96.69
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.49
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.35
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.34
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.31
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.25
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.89
PRK13499	345	rhamnose-proton symporter; Provisional	95.87
PRK09541	110	emrE multidrug efflux protein; Reviewed	95.58
PRK11431	105	multidrug efflux system protein; Provisional	95.57
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.55
COG2076	106	EmrE Membrane transporters of cations and cationic	95.34
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.78
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.72
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.51
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.31
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	93.83
KOG2765	416	consensus Predicted membrane protein [Function unk	93.32
KOG1581	327	consensus UDP-galactose transporter related protei	92.51
KOG1580	337	consensus UDP-galactose transporter related protei	92.04
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.15
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	88.94
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	86.98
PRK09541	110	emrE multidrug efflux protein; Reviewed	86.31
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	84.03
PRK10650	109	multidrug efflux system protein MdtI; Provisional	82.91
COG2076	106	EmrE Membrane transporters of cations and cationic	82.79
PRK11431	105	multidrug efflux system protein; Provisional	81.48

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=9.8e-36  Score=268.30  Aligned_cols=268  Identities=45%  Similarity=0.754  Sum_probs=222.5

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (277)
                      +++.|+++.++++++.+++..++.|.+++.+++|..++++|+.+|+++++++...+ +|+++.++.+++++.++.+.|++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~-~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT-NRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH-HHhcccCcchHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999988765 33222134568888999999999


Q ss_pred             HHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHH------hhccccccccchhh-hhhhhhheec--c--------
Q 023813           87 GVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLF------RMEKLALRTLSTQA-KIIGTMVSIS--V--------  149 (277)
Q Consensus        87 ~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~------~~e~~~~~~~~~i~-~~~g~~~~~~--~--------  149 (277)
                      +.+++.+++.|++|+++++++++.+++|+++.++++++      +|||++++++.|+. .+.|+.+...  +        
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~  167 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASS  167 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence            87777899999999999999999999999999999988      59999999998876 5677665442  1        


Q ss_pred             -----------------CchhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCC-Ccc
Q 023813          150 -----------------SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD-LSL  211 (277)
Q Consensus       150 -----------------~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~-~~~  211 (277)
                                       ++...|+.+.+.++++||+|++.+|+..+++|++...++|++.++++...+.....+++ ...
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~  247 (358)
T PLN00411        168 PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV  247 (358)
T ss_pred             cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence                             11245999999999999999999999988887656778888888888777776665432 223


Q ss_pred             ccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          212 WRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       212 ~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      |...++.....++|.+++ +.++|.+|++++++.||++++.+.+++|++++++|++++||++++.
T Consensus       248 ~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~  311 (358)
T PLN00411        248 WIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG  311 (358)
T ss_pred             ceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH
Confidence            322222234567888875 6789999999999999999999999999999999999999999874

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=5.1e-32  Score=239.21  Aligned_cols=254  Identities=15%  Similarity=0.118  Sum_probs=209.1

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VL   89 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   89 (277)
                      .-...+++..++||.+++++|...+ ++||.+++++|+.+++++++++...+ ++ +.   .+++++......|.++ ..
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~-~~-~~---~~~~~~~~~~~~g~~~~~~   81 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLR-GH-PL---PTLRQWLNAALIGLLLLAV   81 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHh-CC-CC---CcHHHHHHHHHHHHHHHHH
Confidence            3456678889999999999999875 69999999999999999998886543 22 11   2467888888889887 77


Q ss_pred             HHHHHHHhc-cccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc---CchhhHHHHHHHHHH
Q 023813           90 SQIFGYTGI-ACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV---SNWVTGGFLLAAQCF  164 (277)
Q Consensus        90 ~~~~~~~~l-~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~---~~~~~G~~l~l~~a~  164 (277)
                      ++.+++.+. +++++++++++.++.|+++++++.+ +|||++++++.++. ..+|+.+...+   ++...|+++.+.+++
T Consensus        82 ~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~  160 (292)
T PRK11272         82 GNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASA  160 (292)
T ss_pred             HHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHH
Confidence            888999999 9999999999999999999999985 69999999998875 45776554332   123469999999999


Q ss_pred             HHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhc
Q 023813          165 LLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRL  244 (277)
Q Consensus       165 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~  244 (277)
                      +||.|++..||..++.  +...+.+++.++++...+.....+.+..  ...+.+.|..++++++++|.++|.+|++++|+
T Consensus       161 ~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~  236 (292)
T PRK11272        161 SWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRN  236 (292)
T ss_pred             HHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999875443  3566778888888887777665443211  11233568899999999999999999999999


Q ss_pred             cCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          245 KGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       245 ~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .++++++.+.++||+++++++++++||++|+
T Consensus       237 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~  267 (292)
T PRK11272        237 VRPALATSYAYVNPVVAVLLGTGLGGETLSP  267 (292)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence            9999999999999999999999999999985

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=5.2e-31  Score=233.56  Aligned_cols=251  Identities=15%  Similarity=0.098  Sum_probs=194.6

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HHHH
Q 023813           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQ   91 (277)
Q Consensus        13 ~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~   91 (277)
                      .+..++++++||.+++++|.+++ ++||.+++++|+.++++.+.++.  + +++     .+++   .....|++. ..++
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~-~~~-----~~~~---~~~~~g~~~~~~~~   73 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--A-RPK-----VPLN---LLLGYGLTISFGQF   73 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--c-CCC-----CchH---HHHHHHHHHHHHHH
Confidence            35578889999999999999886 59999999999999887766553  2 111     1222   233446655 5566


Q ss_pred             HHHHHhccc-cChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc----Cc-hhhHHHHHHHHHH
Q 023813           92 IFGYTGIAC-SSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV----SN-WVTGGFLLAAQCF  164 (277)
Q Consensus        92 ~~~~~~l~~-~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~----~~-~~~G~~l~l~~a~  164 (277)
                      .+++.++++ .++++++++.+++|+++.+++++++|||++++++.+.. ..+|+.+.+.+    .+ ...|+.+++.+++
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal  153 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF  153 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence            788899998 58899999999999999999999999999999999876 56776665531    11 2369999999999


Q ss_pred             HHHHHHHHHHHHHhhCChh--HHHHHHHHHHHHHHHHHHHHhcCCCC---ccccccchhhHHHHHHHHHHhHHHHHHHHH
Q 023813          165 LLSIWSILLTQIINIYPAE--LLVAFLYNLFAAVIAVPLCLFAEPDL---SLWRLKPDVALVSIVYSAFLGPSFNTIIHT  239 (277)
Q Consensus       165 ~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~  239 (277)
                      +||+|++.+||..++.+++  .....+++..+.+.........+++.   ..+...+...|..++|+|+++|+++|.+|+
T Consensus       154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~  233 (299)
T PRK11453        154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWG  233 (299)
T ss_pred             HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999986654422  34455666666655554444433321   112222345688999999999999999999


Q ss_pred             HHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          240 WGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       240 ~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ++++|.++++++.+.++||+++.++|++++||++++
T Consensus       234 ~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~  269 (299)
T PRK11453        234 TLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTG  269 (299)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence            999999999999999999999999999999999986

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=3.7e-31  Score=234.06  Aligned_cols=249  Identities=13%  Similarity=0.068  Sum_probs=190.1

Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-
Q 023813            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (277)
Q Consensus         9 ~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (277)
                      |.|+++.++.++++||++++..|.+.+ ++||..+.++|+.++++++.++.  + +++ . ++.++    +....+.++ 
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~--~-~~~-~-~~~~~----~~~~~~~l~~   71 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV--G-FPR-L-RQFPK----RYLLAGGLLF   71 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc--c-ccc-c-ccccH----HHHHHHhHHH
Confidence            567788999999999999999999876 49999999999999999888753  1 111 1 11112    222334545 


Q ss_pred             HHHHHHHHHhcc----ccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheeccC------------
Q 023813           88 VLSQIFGYTGIA----CSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISVS------------  150 (277)
Q Consensus        88 ~~~~~~~~~~l~----~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~~------------  150 (277)
                      ..++.+++.+++    ++++++++++.+++|+++.+++++++|||++++++.++. ..+|+.+...++            
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~  151 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNI  151 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcc
Confidence            777888888775    467888999999999999999999999999999999876 567776665421            


Q ss_pred             -chhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHH
Q 023813          151 -NWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFL  229 (277)
Q Consensus       151 -~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~  229 (277)
                       +...|+++.+.+++|||.|++..||..++.+ +....  . ..+++.+.+.....+.+  ..+ .+.+.|..+++.++ 
T Consensus       152 ~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~--~-~~~~~~l~~~~~~~~~~--~~~-~~~~~~~~l~~~~~-  223 (295)
T PRK11689        152 ASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF--F-ILTALALWIKYFLSPQP--AMV-FSLPAIIKLLLAAA-  223 (295)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH--H-HHHHHHHHHHHHHhcCc--ccc-CCHHHHHHHHHHHH-
Confidence             1235999999999999999999999876655 45432  2 23333333333332211  111 23346777888885 


Q ss_pred             hHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          230 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++
T Consensus       224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~  269 (295)
T PRK11689        224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF  269 (295)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence            8999999999999999999999999999999999999999999985

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=7.8e-31  Score=231.78  Aligned_cols=253  Identities=16%  Similarity=0.108  Sum_probs=201.0

Q ss_pred             hhhHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHH
Q 023813            5 KFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLS   84 (277)
Q Consensus         5 ~~~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   84 (277)
                      +|.++.+++..+++++.+|+.++.++|.+.++ +||.+++++|+.++++++.++...+   +.   +.+++++......|
T Consensus         6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~---~~---~~~~~~~~~~~~~g   78 (293)
T PRK10532          6 RKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPW---RL---RFAKEQRLPLLFYG   78 (293)
T ss_pred             cccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHH---hc---cCCHHHHHHHHHHH
Confidence            44566889999999999999999999999875 9999999999999999888764321   11   23567787888888


Q ss_pred             HHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhhheec-----cCchhhHHHHH
Q 023813           85 FIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSIS-----VSNWVTGGFLL  159 (277)
Q Consensus        85 ~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~-----~~~~~~G~~l~  159 (277)
                      ++.+..+.+++++++|++++.++++.+++|+++.+++    +|++++.++.++ .+.|+.+.+.     ++....|+++.
T Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~~~~~i-~~~Gv~li~~~~~~~~~~~~~G~ll~  153 (293)
T PRK10532         79 VSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDFVWVVL-AVLGLWFLLPLGQDVSHVDLTGAALA  153 (293)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHHHHHHH-HHHHHheeeecCCCcccCChHHHHHH
Confidence            8887788999999999999999999999999998876    355554444322 3566655442     11234699999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHH
Q 023813          160 AAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHT  239 (277)
Q Consensus       160 l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~  239 (277)
                      +.++++||.|++..||..++.+ +... .++..++++...+.....+.+ ..+   +...|..++++|+++|.++|.+|+
T Consensus       154 l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~l~lgv~~t~~~~~l~~  227 (293)
T PRK10532        154 LGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE-ALW---HWSILPLGLAVAILSTALPYSLEM  227 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc-ccC---CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999877765 4555 466677777777666543321 111   223466678999999999999999


Q ss_pred             HHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          240 WGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       240 ~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ++++|.+++++|.+.++||+++.++|++++||++++
T Consensus       228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~  263 (293)
T PRK10532        228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL  263 (293)
T ss_pred             HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH
Confidence            999999999999999999999999999999999985

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=7.9e-31  Score=232.07  Aligned_cols=262  Identities=10%  Similarity=0.014  Sum_probs=192.4

Q ss_pred             hhhHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCc-hHHHHHHHHH
Q 023813            5 KFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTV-VPSF-KFSILSRIIL   82 (277)
Q Consensus         5 ~~~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~-~~~~~~~~~~   82 (277)
                      |++++.|+++..++++++||.+++++|.. + ++||.++.++|+.++.+++.++...+ +++.. .++. +++++.... 
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~-   77 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKIFMLA-   77 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHHHHHH-
Confidence            34577889999999999999999999985 4 59999999999999998887776543 21110 0011 234443333 


Q ss_pred             HHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheeccCchhhHHHHHH
Q 023813           83 LSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISVSNWVTGGFLLA  160 (277)
Q Consensus        83 ~g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~~~~~~G~~l~l  160 (277)
                      .+.++ +.++.++++|++++++++++++.+++|+++.+++++++|||+++++|.++. .++|+.+.+..++..  ..+.+
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~--~~~~l  155 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL--PIIAL  155 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc--cHHHH
Confidence            55555 889999999999999999999999999999999999999999999999886 568877665322211  25788


Q ss_pred             HHHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHH
Q 023813          161 AQCFLLSIWSILLTQIINIY-PAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHT  239 (277)
Q Consensus       161 ~~a~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~  239 (277)
                      .++++||.|++..|+..++. .+....+.++..++........   +.+...+...+...+..+.+.|+ .+.++|.+|+
T Consensus       156 ~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~  231 (296)
T PRK15430        156 GLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFT  231 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHH
Confidence            89999999999998875332 1223444555555554422221   11111111111112333444455 7889999999


Q ss_pred             HHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          240 WGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       240 ~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      +++|+.|++++|++.+++|+++.++|++++||++++.
T Consensus       232 ~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~  268 (296)
T PRK15430        232 AAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGAD  268 (296)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999999999999999999999999999999863

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=1e-29  Score=220.48  Aligned_cols=240  Identities=18%  Similarity=0.229  Sum_probs=199.6

Q ss_pred             hHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HHHHHHHHHhcccc
Q 023813           23 TVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQIFGYTGIACS  101 (277)
Q Consensus        23 wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~  101 (277)
                      ||.+++.+|...++..||.+..+.|+..+.+.+.+....   |  +    +++++.+....|.++ .+++.+++.|++|+
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~---~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR---R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh---c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            899999999998777899999999999998888776421   2  1    245666777788887 89999999999999


Q ss_pred             ChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc---CchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 023813          102 SPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV---SNWVTGGFLLAAQCFLLSIWSILLTQII  177 (277)
Q Consensus       102 ~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~---~~~~~G~~l~l~~a~~~a~~~v~~~~~~  177 (277)
                      ++++++++.++.|+++++++.+++|||++++++.++. ..+|+.+....   ++...|+.+.+.++++|+.+++..|+..
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999876 45776665442   2345799999999999999999999988


Q ss_pred             hhCCh-hHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhh
Q 023813          178 NIYPA-ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPL  256 (277)
Q Consensus       178 ~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l  256 (277)
                      ++.+. +.....+.+.++++...+.....+++. ..   +...|..+++.+++++.++|.+|++++|+.++++++.+.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            76542 234555778888888777766544321 11   33467788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCcccC
Q 023813          257 SVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       257 ~pv~a~i~~~~~l~E~~~~  275 (277)
                      +|+++.+++++++||++++
T Consensus       228 ~pv~~~ll~~~~~~E~~~~  246 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSL  246 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCH
Confidence            9999999999999999985

>TIGR00688 rarD rarD protein

Probab=99.97  E-value=8.6e-29  Score=214.63  Aligned_cols=249  Identities=9%  Similarity=0.023  Sum_probs=181.2

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCchHHH-HHHHHHHHHH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTT---VVPSFKFSI-LSRIILLSFI   86 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~g~~   86 (277)
                      |++...++++++||.+++++|. .+ ++||.+++++|+.++.+++.++...++++++   +.++.++++ +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            5788999999999999999998 44 4999999999999999888777654411110   101122333 4456677877


Q ss_pred             HHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheeccCchhhHHHHHHHHHHH
Q 023813           87 GVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISVSNWVTGGFLLAAQCFL  165 (277)
Q Consensus        87 ~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~~~~~~G~~l~l~~a~~  165 (277)
                      +..++.++++|++++++++++++.+++|+++++++++++|||+++++|.++. ..+|+.+...+++..  ..+++.++++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~--~~~~l~aa~~  157 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSL--PWEALVLAFS  157 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCc--hHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999876 557766543321111  1467899999


Q ss_pred             HHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhcc
Q 023813          166 LSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLK  245 (277)
Q Consensus       166 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~  245 (277)
                      ||.|.+..|+..++ +. ...... .........+.... +.++...+..+...|..+++.|++ |.++|.+|++++|+.
T Consensus       158 ~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~  232 (256)
T TIGR00688       158 FTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQ-TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRL  232 (256)
T ss_pred             HHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHH-hccCcccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcC
Confidence            99999999887543 32 222211 11111111111111 111111111222368888888886 899999999999999


Q ss_pred             CceeehhhhhhHHHHHHHHHHHH
Q 023813          246 GPVYIAIFKPLSVVIAAITGIIF  268 (277)
Q Consensus       246 ~~~~~s~~~~l~pv~a~i~~~~~  268 (277)
                      |+++++++.|+||+++.+++++.
T Consensus       233 ~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       233 PLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.95  E-value=7.3e-26  Score=198.91  Aligned_cols=256  Identities=15%  Similarity=0.033  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 023813           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQI   92 (277)
Q Consensus        13 ~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   92 (277)
                      ....+.++++|+..+...|...++ -++  ..++++..+++++.++...+..++.+ ++.+++++......++.+..++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGW-SRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCC-CCcchhhHHHHHHHHHHHHHHHH
Confidence            456678999999999999975444 344  35888888888888776543112222 22334444444444544589999


Q ss_pred             HHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh-hhhhhheecc---CchhhHHHHHHHHHHHHHH
Q 023813           93 FGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTMVSISV---SNWVTGGFLLAAQCFLLSI  168 (277)
Q Consensus        93 ~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~~~~~~---~~~~~G~~l~l~~a~~~a~  168 (277)
                      +++.|++++++++++.+.++.|+++.+++++++|||+++++|.|+.. ..|+.+...+   +....|+.+++.++++|+.
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~  158 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAI  158 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999874 4666554431   1234688899999999999


Q ss_pred             HHHHHHHHHhhCChh---HHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhcc
Q 023813          169 WSILLTQIINIYPAE---LLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLK  245 (277)
Q Consensus       169 ~~v~~~~~~~~~~~~---~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~  245 (277)
                      |++..|+..++.++.   ...+.++...+++...+.....++.  .... ++..+...++.+.+.+.++|.+|++++++.
T Consensus       159 ~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~s~l~~~l~~~al~~~  235 (281)
T TIGR03340       159 YSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMFP-YARQILPSATLGGLMIGGAYALVLWAMTRL  235 (281)
T ss_pred             hhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            999988764443311   1222333333322222222211211  1111 223455677888889999999999999999


Q ss_pred             CceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          246 GPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       246 ~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      |+++++.+.+++|+++.++|++++||+++.
T Consensus       236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~  265 (281)
T TIGR03340       236 PVATVVALRNTSIVFAVVLGIWFLNERWYL  265 (281)
T ss_pred             CceEEEeecccHHHHHHHHHHHHhCCCccH
Confidence            999999999999999999999999999985

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.94  E-value=2.7e-25  Score=197.19  Aligned_cols=245  Identities=10%  Similarity=0.056  Sum_probs=186.8

Q ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHh
Q 023813           28 TLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSS  107 (277)
Q Consensus        28 ~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~  107 (277)
                      ...|.++++--+|...++.|+.++.+.+.+....  +.+++ ++.+++|+.++...|++++.++.+.+.|++|+++++++
T Consensus        19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS--GLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh--CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            4679888654679999999999998776655211  11222 35678899999999999988899999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc--CchhhHHHHHHHHHHHHHHHHHHHHHHHh--hCCh
Q 023813          108 AISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV--SNWVTGGFLLAAQCFLLSIWSILLTQIIN--IYPA  182 (277)
Q Consensus       108 ~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~--~~~~~G~~l~l~~a~~~a~~~v~~~~~~~--~~~~  182 (277)
                      ++.+++|+++.+++.+++|||++++++.++. ...|+.+...+  +....|+++++.++++||.|++..||..+  +.+ 
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-  174 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-  174 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-
Confidence            9999999999999999999999999998876 45666544332  22346999999999999999999999877  565 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCCc---cccc----cch-hhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhh
Q 023813          183 ELLVAFLYNLFAAVIAVPLCLFAEPDLS---LWRL----KPD-VALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFK  254 (277)
Q Consensus       183 ~~~~~~~~~~~g~i~~~~~~~~~~~~~~---~~~~----~~~-~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~  254 (277)
                      +...+.|++..+++.+.+.....|++..   ++..    .+. ..+...+..+..+....+.++++++++.++++.+.+.
T Consensus       175 ~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~  254 (302)
T TIGR00817       175 KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGN  254 (302)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHh
Confidence            6899999999999988888776553210   1100    000 1111122222222222224566899999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCcccCC
Q 023813          255 PLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       255 ~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      +++|++++++|++++||++|+.
T Consensus       255 ~l~pv~~~~~~~~~lge~lt~~  276 (302)
T TIGR00817       255 CMKRVVVIVVSILFFGTKISPQ  276 (302)
T ss_pred             hhhhhheeeeehhhcCCCCchh
Confidence            9999999999999999999863

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.92  E-value=1.4e-22  Score=183.23  Aligned_cols=246  Identities=15%  Similarity=0.127  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 023813           25 GLNTLFKAAASKGLS-YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSF--KFSILSRIILLSFIGVLSQIFGYTGIACS  101 (277)
Q Consensus        25 ~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~l~~~  101 (277)
                      ......|.++++ +| |..++.+|+.++.+....+...+ .++ + ++.  .++++..++..|+++...+...+.|++++
T Consensus        63 ~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~-~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~  138 (350)
T PTZ00343         63 LYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRK-I-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLG  138 (350)
T ss_pred             HHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCC-C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            345678888765 99 99999999999987765543321 122 2 233  34578889999999954566677999999


Q ss_pred             ChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc-Cc-hhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 023813          102 SPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV-SN-WVTGGFLLAAQCFLLSIWSILLTQIIN  178 (277)
Q Consensus       102 ~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~-~~-~~~G~~l~l~~a~~~a~~~v~~~~~~~  178 (277)
                      +++.++++.++.|+++.+++++++|||++++++.++. ...|+.++..+ .+ ...|++++++++++||.|++..|+..+
T Consensus       139 svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~  218 (350)
T PTZ00343        139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMK  218 (350)
T ss_pred             cHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999887 45666665542 22 256999999999999999999999876


Q ss_pred             hCC------hhHHHHHHHHHHHHHHHHHHHHhcCCCC--cccc----ccchhhHHHHHHHHHHhHHHHHHHHHH----Hh
Q 023813          179 IYP------AELLVAFLYNLFAAVIAVPLCLFAEPDL--SLWR----LKPDVALVSIVYSAFLGPSFNTIIHTW----GL  242 (277)
Q Consensus       179 ~~~------~~~~~~~~~~~~g~i~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~gv~~t~~~~~~~~~----~~  242 (277)
                      +.+      ++.....++...|+++..+.....|.+.  ..+.    ..+...+..+++. ++.+++.|.+|+.    ++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l  297 (350)
T PTZ00343        219 NKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCL  297 (350)
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            532      2355666678899998888877555321  1110    0011122344454 5578999999995    99


Q ss_pred             hccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          243 RLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       243 ~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ++.++.+.+...+++|++++++|++++||++|+
T Consensus       298 ~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~  330 (350)
T PTZ00343        298 GKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL  330 (350)
T ss_pred             hccchhHHHHHHHHHHHHHhhhhHHHhCCCCch
Confidence            999999999999999999999999999999986

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.91  E-value=5.3e-22  Score=173.82  Aligned_cols=258  Identities=22%  Similarity=0.281  Sum_probs=193.7

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (277)
                      ++..+.....+...+.|+.++...|...++..++....+.|+..+.....+....  ++... .+. .++.......+.+
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~   78 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EPRGL-RPA-LRPWLLLLLLALL   78 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh--hcccc-ccc-ccchHHHHHHHHH
Confidence            3445567777888899999999999987544777788888999999884444322  11111 111 2223344555555


Q ss_pred             H-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHH-HHhhccccccccchhh-hhhhhhheeccCc-----hhhHHHH
Q 023813           87 G-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAV-LFRMEKLALRTLSTQA-KIIGTMVSISVSN-----WVTGGFL  158 (277)
Q Consensus        87 ~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~-l~~~e~~~~~~~~~i~-~~~g~~~~~~~~~-----~~~G~~l  158 (277)
                      + ..++.+++.++++++++.++.+.++.|+++.+++. +++|||++++++.++. ...|+.+....++     ...|+.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~  158 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLL  158 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHH
Confidence            5 89999999999999999999999999999999997 6779999999999865 4677777666222     2479999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCChhHHHHH-HHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHH
Q 023813          159 LAAQCFLLSIWSILLTQIINIYPAELLVAF-LYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTII  237 (277)
Q Consensus       159 ~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~  237 (277)
                      ++.++++|+++++..|+.. +.+ +..... ++.. +...........+.+    ...+...+..+.+.|+++++++|.+
T Consensus       159 ~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         159 ALAAALLWALYTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGFG----APILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhcccc----ccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999887 444 355555 4444 222222222211111    1123346888899999999999999


Q ss_pred             HHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          238 HTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       238 ~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      |++++++.+++.++.+.+++|+++.+++++++||+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~  269 (292)
T COG0697         232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSP  269 (292)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence            99999999999999999999999999999999999975

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.85  E-value=9.7e-19  Score=155.36  Aligned_cols=261  Identities=16%  Similarity=0.151  Sum_probs=190.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASKGLS-YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVL   89 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (277)
                      +..+..=..+++-.++...+....+.+.+ |..-.+.-+..-.++..+....|+++++. .+..+++++++++.+++-..
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~-~~~~~~~~w~y~lla~~Dv~   91 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW-LKVLKRPWWKYFLLALLDVE   91 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccc-hhhcchhHHHHHHHHHHHHH
Confidence            33333333444555666666655444443 44444554444444555555444122222 23335678888889999999


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec-----c------CchhhHHH
Q 023813           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS-----V------SNWVTGGF  157 (277)
Q Consensus        90 ~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~-----~------~~~~~G~~  157 (277)
                      ++++...|++||+.+.++++..+.-+++.+++++++|||.++.++.|+. ...|+++...     +      ++...||+
T Consensus        92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDl  171 (334)
T PF06027_consen   92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDL  171 (334)
T ss_pred             HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHH
Confidence            9999999999999999999999999999999999999999999998876 4555454443     1      23468999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCC-ccccccchhhHHHHHHHHHHhHHHHHH
Q 023813          158 LLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDL-SLWRLKPDVALVSIVYSAFLGPSFNTI  236 (277)
Q Consensus       158 l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~gv~~t~~~~~  236 (277)
                      +++.|+++||++++..++..++.| ..+...+..++|.++..+.....|.+. ...+..+ +.+...+ ...++...-|.
T Consensus       172 l~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~-~~~~~~v-~~~~~lf~~y~  248 (334)
T PF06027_consen  172 LALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS-QVIGLLV-GYALCLFLFYS  248 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-hhHHHHH-HHHHHHHHHHH
Confidence            999999999999999999999887 588888899999999988888777642 2222211 2233222 22335667777


Q ss_pred             HHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          237 IHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       237 ~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +....++..+|+..++-..+..+++++++++++||++++
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~  287 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSW  287 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccH
Confidence            889999999999999999999999999999999999886

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.85  E-value=1.3e-19  Score=150.71  Aligned_cols=248  Identities=17%  Similarity=0.064  Sum_probs=194.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (277)
                      ++..++.++..--....+.|..+.. ++|...+++|..++++++..+.  |   ..+ ++.+++|+..+..-|+.-+.-+
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~--R---Pwr-~r~~~~~~~~~~~yGvsLg~MN   85 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF--R---PWR-RRLSKPQRLALLAYGVSLGGMN   85 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh--h---HHH-hccChhhhHHHHHHHHHHHHHH
Confidence            5777777777666678889988765 9999999999999999988874  2   222 3567888999999999888888


Q ss_pred             HHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhhheec-c----CchhhHHHHHHHHHHHH
Q 023813           92 IFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSIS-V----SNWVTGGFLLAAQCFLL  166 (277)
Q Consensus        92 ~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~-~----~~~~~G~~l~l~~a~~~  166 (277)
                      .+||.+++.+|-+.+..+-++-|+.++.++.    ++.+-..|.++ .+.|+.+... +    .-...|..+.+.+..||
T Consensus        86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr~~d~vwvaL-AvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~W  160 (292)
T COG5006          86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSS----RRLRDFVWVAL-AVLGIWLLLPLGQSVWSLDPVGVALALGAGACW  160 (292)
T ss_pred             HHHHHHHHhccchhhhhhhhccHHHHHHHhc----cchhhHHHHHH-HHHHHHhheeccCCcCcCCHHHHHHHHHHhHHH
Confidence            9999999999999999999999998887664    22222223332 2344444333 1    22358999999999999


Q ss_pred             HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccC
Q 023813          167 SIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKG  246 (277)
Q Consensus       167 a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~  246 (277)
                      ++|.+..+|..+..+ ...-+...+.+++++..++.....++  ..  .++.-...-+..|+++|.+.|.+=..+++|.+
T Consensus       161 a~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~--~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp  235 (292)
T COG5006         161 ALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP--AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLP  235 (292)
T ss_pred             HHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch--hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence            999999999876555 36778889999999988887743321  11  12233555678899999999999999999999


Q ss_pred             ceeehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          247 PVYIAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       247 ~~~~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      ....+....+||.++.+.|++++||++|+.
T Consensus       236 ~~~F~~LlSLePa~aAl~G~i~L~e~ls~~  265 (292)
T COG5006         236 ARTFGTLLSLEPALAALSGLIFLGETLTLI  265 (292)
T ss_pred             hhHHHHHHHhhHHHHHHHHHHHhcCCCCHH
Confidence            999999999999999999999999999863

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.83  E-value=2.4e-18  Score=146.53  Aligned_cols=261  Identities=11%  Similarity=0.070  Sum_probs=198.4

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCchHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTV-VPSFKFSILSRIILLSF   85 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~   85 (277)
                      ++..|+++..+.+.++||..+...|.. ++ +|+.++.+.|..-+...+.......|+++.. +..-+.|.+..+...+.
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            445689999999999999999999985 54 9999999999999988887665544122211 11113455666777777


Q ss_pred             HHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh-hhhhhheec-cCchhhHHHHHHHHH
Q 023813           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTMVSIS-VSNWVTGGFLLAAQC  163 (277)
Q Consensus        86 ~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~~~~~-~~~~~~G~~l~l~~a  163 (277)
                      +.+.++..|.|+.++-..-++|.=.+..|++..+++.+++|||+++-||.++.. .+|+..-.. .++..   ...+.=+
T Consensus        81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp---wval~la  157 (293)
T COG2962          81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP---WVALALA  157 (293)
T ss_pred             HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHH
Confidence            779999999999999999999999999999999999999999999999998864 466555443 22221   3455557


Q ss_pred             HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhh
Q 023813          164 FLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLR  243 (277)
Q Consensus       164 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~  243 (277)
                      +.|+.|...-|+. + .++ .+-....++.-.+...++....+.+++..+..++..+..++..|+ .|+++-.+|..+-|
T Consensus       158 ~sf~~Ygl~RK~~-~-v~a-~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~  233 (293)
T COG2962         158 LSFGLYGLLRKKL-K-VDA-LTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAK  233 (293)
T ss_pred             HHHHHHHHHHHhc-C-Cch-HHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHh
Confidence            8899999985554 3 332 555556666666666666655543332122123445777778888 77999999999999


Q ss_pred             ccCceeehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          244 LKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       244 ~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      |.+-+..+.+.|.+|..-.+++++++||+++..
T Consensus       234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~  266 (293)
T COG2962         234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSD  266 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            999999999999999999999999999999853

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.82  E-value=3.8e-18  Score=150.51  Aligned_cols=244  Identities=16%  Similarity=0.112  Sum_probs=178.2

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCch-HHHHHHHHHHHHHHHHHH
Q 023813           13 LSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFK-FSILSRIILLSFIGVLSQ   91 (277)
Q Consensus        13 ~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~   91 (277)
                      ++..++++++||++.+..|...  +.++.++.  |..++.+++..+.... +++    +.+ ++.+..-+..|++-+.++
T Consensus         3 ~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~-~~~----~~~~~~~~~~g~l~G~~w~ig~   73 (290)
T TIGR00776         3 ILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIF-VLP----EFWALSIFLVGLLSGAFWALGQ   73 (290)
T ss_pred             hHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHH-hCC----cccccHHHHHHHHHHHHHHhhh
Confidence            5678889999999999999863  68888886  8888888887766554 211    112 233333444455557888


Q ss_pred             HHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhhccccccc----cchhh-hhhhhhheec---c-------CchhhH
Q 023813           92 IFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRT----LSTQA-KIIGTMVSIS---V-------SNWVTG  155 (277)
Q Consensus        92 ~~~~~~l~~~~~~~a~~l~~-~~P~~~~~l~~l~~~e~~~~~~----~~~i~-~~~g~~~~~~---~-------~~~~~G  155 (277)
                      .+++.++++++.+.+..+.+ +.|++.++.+.+++|||.++++    ..++. ..+|+.+...   +       .+...|
T Consensus        74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~G  153 (290)
T TIGR00776        74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKG  153 (290)
T ss_pred             hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhH
Confidence            99999999999999999888 8888999999999999999987    55554 3355443322   1       222589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHH---HHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHH
Q 023813          156 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLY---NLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPS  232 (277)
Q Consensus       156 ~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~---~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~  232 (277)
                      ..+.+.++++|+.|.+..|+.  +++ |...++.+   ++.++........ ..+   .+  .+...+..++ .|++ +.
T Consensus       154 i~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~-~~~---~~--~~~~~~~~~~-~Gi~-~~  222 (290)
T TIGR00776       154 ILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGHI-LAK---PL--KKYAILLNIL-PGLM-WG  222 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHHh-ccc---ch--HHHHHHHHHH-HHHH-HH
Confidence            999999999999999999875  344 57774443   4444443222211 011   11  1222344444 8887 79


Q ss_pred             HHHHHHHHHhh-ccCceeehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          233 FNTIIHTWGLR-LKGPVYIAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       233 ~~~~~~~~~~~-~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      +++.+|..+.+ +.++++++..++.||+.+.+.+++++||+.++-
T Consensus       223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~  267 (290)
T TIGR00776       223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR  267 (290)
T ss_pred             HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence            99999999999 999999999999999999999999999998753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.62  E-value=2.3e-16  Score=132.33  Aligned_cols=252  Identities=17%  Similarity=0.160  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLS   90 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   90 (277)
                      ++...+.+. .++.+..+..+..++  .+|.+..-.|++.-.++..|-...+ +.....|+-.|   ..++.+|+.|..+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~-~~~v~gp~g~R---~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYY-MQPVIGPEGKR---KWLILRGFMGFTG  110 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEE-eeeeecCCCcE---EEEEeehhhhhhH
Confidence            344444444 677777777777653  6999999999776666655544332 11111122112   2456689999888


Q ss_pred             HHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec------------c----Cchh
Q 023813           91 QIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS------------V----SNWV  153 (277)
Q Consensus        91 ~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~------------~----~~~~  153 (277)
                      ....|++++|.+-+.|+++....|.++.++++.++||+.++-..++.. .+.|+++.+-            +    +...
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            889999999999999999999999999999999999999998777654 5677666553            0    1224


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-chhhHHHHHHHHHHhHH
Q 023813          154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLK-PDVALVSIVYSAFLGPS  232 (277)
Q Consensus       154 ~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gv~~t~  232 (277)
                      .|-+..+.+++.-|--.++.|+..|+.+. .....|..+++.+...+.....+    .++.+ ...+|+..+.+|+++ .
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr~l~~~lGvfg-f  264 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDRWLFVNLGVFG-F  264 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----ceecCccccceEEEEEehhhh-h
Confidence            57777888887777777777887777653 44455667777776666554332    23332 334677788899955 8


Q ss_pred             HHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          233 FNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +++.+...++|+-.+..+++..+.+.++|.++.++++||.+|+
T Consensus       265 igQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~  307 (346)
T KOG4510|consen  265 IGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTI  307 (346)
T ss_pred             HHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChH
Confidence            9999999999999999999999999999999999999999985

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.53  E-value=6.4e-12  Score=111.65  Aligned_cols=230  Identities=15%  Similarity=0.170  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHH
Q 023813           40 YYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFT  119 (277)
Q Consensus        40 p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~  119 (277)
                      |..+++..+....+.-.+..... +++.    .+++.+.++...+++..++..+-+.+++|+|.+.-.++-...|+.+++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLF-KFPK----SRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhc-cccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            88999999999888777665543 2111    223344566677888888999999999999999999999999999999


Q ss_pred             HHHHHhhccccccccchhhhh-hhhhheec-c-------C----chhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-hhHH
Q 023813          120 LAVLFRMEKLALRTLSTQAKI-IGTMVSIS-V-------S----NWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELL  185 (277)
Q Consensus       120 l~~l~~~e~~~~~~~~~i~~~-~g~~~~~~-~-------~----~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~-~~~~  185 (277)
                      ++.+++|+|.+++++.++... +|+.+.-. +       +    +...|+.+.+.+.++.+...+.++|..++++ ++.+
T Consensus       107 ~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~  186 (303)
T PF08449_consen  107 LGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWE  186 (303)
T ss_pred             HHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH
Confidence            999999999999999987754 55544433 0       1    1124999999999999999999999976644 4578


Q ss_pred             HHHHHHHHHHHHHHHHHHh--cCCCCc--cccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHH
Q 023813          186 VAFLYNLFAAVIAVPLCLF--AEPDLS--LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIA  261 (277)
Q Consensus       186 ~~~~~~~~g~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a  261 (277)
                      ..+|...++.+...+....  .++..+  .+...+++.+..++...+ ...++....++..++.|+...+....+--+.+
T Consensus       187 ~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~s  265 (303)
T PF08449_consen  187 LMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLS  265 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHH
Confidence            8999999999888877776  322111  111223334555555555 55777788888899999999999999999999


Q ss_pred             HHHHHHHhCCcccC
Q 023813          262 AITGIIFLGDTLHL  275 (277)
Q Consensus       262 ~i~~~~~l~E~~~~  275 (277)
                      ++++++++||++++
T Consensus       266 illS~~~f~~~~~~  279 (303)
T PF08449_consen  266 ILLSVIIFGHPLSP  279 (303)
T ss_pred             HHHHHHhcCCcCCh
Confidence            99999999999886

; GO: 0055085 transmembrane transport

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.51  E-value=1.6e-13  Score=103.02  Aligned_cols=132  Identities=15%  Similarity=0.105  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (277)
                      ..++.++++++||...++.|+..+ ++||..-++.|.......+..+.... ++.+....++.|.+..++..|+.+++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~-g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVT-GNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhc-CceecccccCcceehhhhHHHHHHHHHH
Confidence            467889999999999999999986 59999999999999999988887765 3333212367888999999998889999


Q ss_pred             HHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhh-hhhhh
Q 023813           92 IFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKI-IGTMV  145 (277)
Q Consensus        92 ~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~-~g~~~  145 (277)
                      .+||.+++.-.++...-+-.+.|.++.++++++++||++.++|.|+..+ +|+++
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            9999999999999999999999999999999999999999999988754 55543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.48  E-value=1.2e-13  Score=105.84  Aligned_cols=120  Identities=21%  Similarity=0.294  Sum_probs=101.0

Q ss_pred             HHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HHHHHHHHHhcc
Q 023813           21 CTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQIFGYTGIA   99 (277)
Q Consensus        21 ~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~   99 (277)
                      ++||...++.|...++ +||.+.+++|+..+.+ +.+..... ++++. .+.+.+++......|.++ ..++.+++.+++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-ccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            4799999999998765 9999999999999997 55555554 33332 356678888888889987 999999999999


Q ss_pred             ccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh-hhhhh
Q 023813          100 CSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTM  144 (277)
Q Consensus       100 ~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~  144 (277)
                      +++++.++.+.++.|+++.+++++++||+++++++.+... ..|+.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~  122 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVV  122 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998887654 34443

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.38  E-value=6.3e-12  Score=110.49  Aligned_cols=188  Identities=17%  Similarity=0.281  Sum_probs=144.9

Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhhheec-c----------CchhhHH
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSIS-V----------SNWVTGG  156 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~-~----------~~~~~G~  156 (277)
                      ..+++.+..++++|+++..+++.++..+|+..++.++..||+++.+..++..-+|+++.+. +          .+...|+
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~  249 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGN  249 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHH
Confidence            8899999999999999999999999999999999999999999997777764444444443 1          1236899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCC---hhHHHHHHHHHHHHHHHHHHHHhcCC-CCccccccchhhHHHHHHHHHHhHH
Q 023813          157 FLLAAQCFLLSIWSILLTQIINIYP---AELLVAFLYNLFAAVIAVPLCLFAEP-DLSLWRLKPDVALVSIVYSAFLGPS  232 (277)
Q Consensus       157 ~l~l~~a~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~g~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gv~~t~  232 (277)
                      ++.+.+|+.||+|.++.||...+++   +-.....+..++..+++++...+... ..+.++.++..+...++..+.++|.
T Consensus       250 llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtv  329 (416)
T KOG2765|consen  250 LLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTV  329 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHH
Confidence            9999999999999999999876653   21222334444445555544433211 1123455555566677888999999


Q ss_pred             HHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          233 FNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ++-++|.+++--.+|..+.+-..++.+.|++.+.++=|.++++
T Consensus       330 vSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  330 VSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA  372 (416)
T ss_pred             HHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence            9999999999999999999999999999999998887777764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.29  E-value=6.3e-10  Score=95.59  Aligned_cols=201  Identities=12%  Similarity=0.173  Sum_probs=149.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh-hhhhhheec---
Q 023813           73 KFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTMVSIS---  148 (277)
Q Consensus        73 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~~~~~---  148 (277)
                      ++||..++.+.+++..+.+.+.+.++++.+++.-.++.++-.+++++++++++|+|++++||.++.. ..|+.+.-.   
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            5788899999999999999999999999999999999999999999999999999999999999874 466555443   


Q ss_pred             -c---------------CchhhHHHHHHHHHHHHHHHHHHHHHHHhhCChh-HHHHHHHHHHHHHHHHHHHHhcCCCC-c
Q 023813          149 -V---------------SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAE-LLVAFLYNLFAAVIAVPLCLFAEPDL-S  210 (277)
Q Consensus       149 -~---------------~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~~-~  210 (277)
                       +               .+...|.++.+.++++-+...+..+|..|+.+.+ .........+|.+...+.....+.+. .
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence             1               0135799999999999999999999999885422 44454555666666555544433211 1


Q ss_pred             cccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          211 LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       211 ~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +-..  .+.+-...+..++..+++=.+....+|+.|...=+......-+.+.+.++.++|+++|.
T Consensus       173 ~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~  235 (244)
T PF04142_consen  173 ESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL  235 (244)
T ss_pred             cCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            1000  01111112223334455556667778888888778888889999999999999999985

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.28  E-value=9.2e-11  Score=101.57  Aligned_cols=128  Identities=20%  Similarity=0.220  Sum_probs=106.1

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSY--YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLS   84 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   84 (277)
                      +.+.++..+.+.++++|+...+..|...+ +.+|  .....+|+.++.+++.++.... +++   ...+.+++......|
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~---~~~~~~~~~~~~~~~  198 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFL-GPN---PQALSLQWGALLYLG  198 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhc-CCC---CCcchHHHHHHHHHH
Confidence            34467899999999999999999999864 3664  4556678999999988887654 222   223567777788889


Q ss_pred             HHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           85 FIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        85 ~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      +++ .+++.++++++++.+++.++.+.++.|+++.+++++++||+++++++.|...
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~l  254 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGAL  254 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            888 8999999999999999999999999999999999999999999997766543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.24  E-value=2.7e-11  Score=92.63  Aligned_cols=108  Identities=21%  Similarity=0.370  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhh
Q 023813          164 FLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLR  243 (277)
Q Consensus       164 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~  243 (277)
                      ++||.+.+..|+..++.| |...+.+....+++ ..+.....+...  ....+.+.+....+.+.+++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            478999999999999877 69999999999998 666655544321  12223345777888899889999999999999


Q ss_pred             ccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          244 LKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       244 ~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +.++++++.+.+++|+++.+++++++||+++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~  108 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSW  108 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            99999999999999999999999999999985

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.14  E-value=1e-09  Score=82.65  Aligned_cols=117  Identities=12%  Similarity=0.120  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHH
Q 023813          156 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNT  235 (277)
Q Consensus       156 ~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~  235 (277)
                      .++.+.+++.++...+..|--.|+.+ |...+........+.+.......+. .+.-...++..|..++..|+ +++++.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHHH
Confidence            57899999999999999888888766 5777888888777777777766542 11111125567899999996 999999


Q ss_pred             HHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          236 IIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       236 ~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .+|++++|+.+++++.+..-..|++++++|++++||++|.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~  121 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSL  121 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCH
Confidence            9999999999999999999999999999999999999985

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.13  E-value=8.9e-11  Score=89.05  Aligned_cols=102  Identities=25%  Similarity=0.354  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHH
Q 023813           45 AYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL  123 (277)
Q Consensus        45 ~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l  123 (277)
                      .+|+..+.+.+..+...+++.+...+..+++++..++..|.++ ..++.++++|+++.+ +..+.+.+++|+++.+++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            6899999999998887751211111233456667777788888 599999999999999 58889999999999999999


Q ss_pred             Hhhccccccccchhh-hhhhhhhee
Q 023813          124 FRMEKLALRTLSTQA-KIIGTMVSI  147 (277)
Q Consensus       124 ~~~e~~~~~~~~~i~-~~~g~~~~~  147 (277)
                      ++|||++++++.++. ..+|+++..
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIA  105 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999998876 446655443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.12  E-value=1.2e-09  Score=96.47  Aligned_cols=245  Identities=11%  Similarity=0.113  Sum_probs=174.0

Q ss_pred             HHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChh
Q 023813           27 NTLFKAAAS--KGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPT  104 (277)
Q Consensus        27 ~~~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~  104 (277)
                      ....|..++  +.--|..++..++..+.+.+......+ .++.. +..++..+..++-.|++.++...+-..++++.+++
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~-~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~Vs  110 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLK-LVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVS  110 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchh
Confidence            345577666  434677888888888877766665443 22221 11133456677778998899999999999999999


Q ss_pred             hHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheecc-Cc-hhhHHHHHHHHHHHHHHHHHHHHHHHh--h
Q 023813          105 LSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISV-SN-WVTGGFLLAAQCFLLSIWSILLTQIIN--I  179 (277)
Q Consensus       105 ~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~-~~-~~~G~~l~l~~a~~~a~~~v~~~~~~~--~  179 (277)
                      -...+-.++|+++.++++++.+|+.+++.+..+. ...|+.++-.+ .+ ...|...++.+.+..+..++..|+..+  +
T Consensus       111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~  190 (316)
T KOG1441|consen  111 FYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKG  190 (316)
T ss_pred             HHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999999999999999999999999999988766 44666655553 32 358999999999999999999999874  2


Q ss_pred             --CChhHHHHHHHHHHHHHHHH-HHHHhcCCCCc-cccc-cchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhh
Q 023813          180 --YPAELLVAFLYNLFAAVIAV-PLCLFAEPDLS-LWRL-KPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFK  254 (277)
Q Consensus       180 --~~~~~~~~~~~~~~g~i~~~-~~~~~~~~~~~-~~~~-~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~  254 (277)
                        . ++.....++.-++.+.+. |.....|++.. .+.. .+.......++..+ ....-....+..+.|.+|.+-++.+
T Consensus       191 ~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g  268 (316)
T KOG1441|consen  191 ESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAG  268 (316)
T ss_pred             ccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhc
Confidence              3 358888888888888777 66665554321 0011 11112222222322 1122223456777899999999999


Q ss_pred             hhHHHHHHHHHHHHhCCcccC
Q 023813          255 PLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       255 ~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .+--.+.+..|+++++|+.|+
T Consensus       269 ~~K~~~vi~~s~~iF~~pvt~  289 (316)
T KOG1441|consen  269 HMKRIVVIVVSWLIFGNPVTF  289 (316)
T ss_pred             cceEEEEEEeEeeeecCCCch
Confidence            888888899999999997764

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.04  E-value=2.7e-07  Score=81.44  Aligned_cols=259  Identities=11%  Similarity=0.133  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHHHhhccC---CCCCC------chHHHHH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASKG---LSYYVFVAYSYPLATLALLPLPLIFRNTT---TVVPS------FKFSILS   78 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~~---~~~~~------~~~~~~~   78 (277)
                      ..++.++...+.++......|..-..+   ..|...++.--.+-.++.....+.. .|+   +..+.      -.++|..
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFE-ERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHH-hhHHhhhhhhhcCHHHHhChHHHH
Confidence            446777778889999999999875555   6788888888877777776666554 211   11011      1355788


Q ss_pred             HHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec---------
Q 023813           79 RIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS---------  148 (277)
Q Consensus        79 ~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~---------  148 (277)
                      +..+.+++.++.+-..|.++.+.++++-.+..++--+.|+++..+++|+|.+++||.++. ...|+.+.-.         
T Consensus        94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            888889999888889999999999999999999999999999999999999999999987 4577776652         


Q ss_pred             ----cCchhhHHHHHHHHHHHHHHHHHHHHHHHhhCChh-HHHHHHHHHHHHHHHHHHHHhcCCC-C--cc-ccccchhh
Q 023813          149 ----VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAE-LLVAFLYNLFAAVIAVPLCLFAEPD-L--SL-WRLKPDVA  219 (277)
Q Consensus       149 ----~~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~g~i~~~~~~~~~~~~-~--~~-~~~~~~~~  219 (277)
                          ..+...|...++.++++-+.-.++.++..|+.+.+ +..+.-...+|.+...+.....+.. .  .+ ++-.+...
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence                12346899999999999999999999998874432 3333333444555444444332211 1  11 11111223


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          220 LVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       220 ~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      |..++..++     +=.+-..-+|+.|...=+-...+..+++.+.++.++|-++|.
T Consensus       254 w~vVl~~a~-----gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~  304 (345)
T KOG2234|consen  254 WLVVLLNAV-----GGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTL  304 (345)
T ss_pred             HHHHHHHhc-----cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence            444444444     445555556666666656666678888888998888887764

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.02  E-value=1.1e-09  Score=91.95  Aligned_cols=222  Identities=18%  Similarity=0.157  Sum_probs=161.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHH
Q 023813           39 SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTF  118 (277)
Q Consensus        39 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~  118 (277)
                      .|..-.|.-+.+=+++-.++..+|  |+.  .+..   |.+++++++...=++++...+.|||+-....++---.-..+.
T Consensus        47 ~Pt~QtFl~Y~LLalVY~~~~~fR--~~~--~~~~---~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~  119 (336)
T KOG2766|consen   47 APTSQTFLNYVLLALVYGPIMLFR--RKY--IKAK---WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVL  119 (336)
T ss_pred             CccHHHHHHHHHHHHHHhhHHHhh--hHH--HHHH---HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHH
Confidence            466778888888888889988876  222  1222   334777788776677788899999998888887665555778


Q ss_pred             HHHHHHhhccccccccchhh-hhhhhhheec----------cCchhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHH
Q 023813          119 TLAVLFRMEKLALRTLSTQA-KIIGTMVSIS----------VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVA  187 (277)
Q Consensus       119 ~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~----------~~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~  187 (277)
                      +++++++|.|.++.++.|+. ++.|+++.+.          +.+-..||++++.++.+||+.++..+.+.|+.|. .+..
T Consensus       120 ~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm  198 (336)
T KOG2766|consen  120 VLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELM  198 (336)
T ss_pred             HHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHH
Confidence            99999999999999777764 5666665554          1234589999999999999999999999998874 8888


Q ss_pred             HHHHHHHHHHHHHHHHhcCC-CCccccccchhhHHHHHHHH-HHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHH
Q 023813          188 FLYNLFAAVIAVPLCLFAEP-DLSLWRLKPDVALVSIVYSA-FLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITG  265 (277)
Q Consensus       188 ~~~~~~g~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g-v~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~  265 (277)
                      ....++|+++..+- .+++. +....+  ++++.  ..|++ .+...+-|.+....+|..+++..++-......++.++ 
T Consensus       199 ~~lgLfGaIIsaIQ-~i~~~~~~~tl~--w~~~i--~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i-  272 (336)
T KOG2766|consen  199 GFLGLFGAIISAIQ-FIFERHHVSTLH--WDSAI--FLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI-  272 (336)
T ss_pred             HHHHHHHHHHHHHH-HhhhccceeeEe--ehHHH--HHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH-
Confidence            89999999998888 44443 222222  22222  22232 2233445555666778999999999999999999888 


Q ss_pred             HHHhCCcccC
Q 023813          266 IIFLGDTLHL  275 (277)
Q Consensus       266 ~~~l~E~~~~  275 (277)
                       -.+|-+.+|
T Consensus       273 -~~FgYhv~w  281 (336)
T KOG2766|consen  273 -RTFGYHVDW  281 (336)
T ss_pred             -HHHhcchhh
Confidence             556655554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.91  E-value=3.3e-08  Score=87.40  Aligned_cols=123  Identities=11%  Similarity=0.061  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-H
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-V   88 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   88 (277)
                      ..+.+..+.++++|+...+..|... ++.+|...... ..++++++.++.... ..  . ...+...+...+..|++. .
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~-~~--~-~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAG-AEHGPATVAIG-SLIAALIFVPIGALQ-AG--E-ALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHHH-HHHHHHHHHHHHHHc-cC--c-ccCCHHHHHHHHHHHHHHHH
Confidence            4578899999999999999999975 44788777554 456666677766543 21  1 123344454556788888 8


Q ss_pred             HHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh
Q 023813           89 LSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA  138 (277)
Q Consensus        89 ~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~  138 (277)
                      +.+.+++++++++++++++.+.++.|++..++++++++|++++.++.|..
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~  270 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALG  270 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence            89999999999999999999999999999999999999999999554443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.91  E-value=2.9e-08  Score=87.69  Aligned_cols=127  Identities=11%  Similarity=-0.033  Sum_probs=102.6

Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-
Q 023813            9 EALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (277)
Q Consensus         9 ~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (277)
                      +.++.++.++++++|+...+..|... . -++....++++.++++++.++.... +.... ...+.+++..+...|+++ 
T Consensus       148 ~~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~i~~l~i~~s  223 (292)
T PRK11272        148 NPWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLS-GERLT-ALPTLSGFLALGYLAVFGS  223 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHc-CCccc-ccCCHHHHHHHHHHHHHHH
Confidence            35688999999999999999999853 3 3456677899999999888876543 22111 112456777888889988 


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      .+.+.++++++++.++++++.+.++.|++.+++++++++|++++.++.|...
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~l  275 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGV  275 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999996665543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.78  E-value=2.7e-06  Score=74.15  Aligned_cols=246  Identities=14%  Similarity=0.141  Sum_probs=176.0

Q ss_pred             HHHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccCh
Q 023813           26 LNTLFKAAASKGLSYYVFVA--YSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSP  103 (277)
Q Consensus        26 ~~~~~k~~~~~~~~p~~~~~--~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~  103 (277)
                      .-+.-|.++.+.=-|..+..  ++.+...+++...-..   |-.+.+++++++.++++-..++..+....-..+++|.+.
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~---~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnV  103 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL---GLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNV  103 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh---ceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCc
Confidence            45566777765223444444  8888887776655322   222235678888888888899888888888999999999


Q ss_pred             hhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec-cCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 023813          104 TLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS-VSNWV-TGGFLLAAQCFLLSIWSILLTQIINIY  180 (277)
Q Consensus       104 ~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~-~~~~~-~G~~l~l~~a~~~a~~~v~~~~~~~~~  180 (277)
                      ..-.++=..+|+++++...+++|.+++++.|..+. .+.|...... +..+. .|-.+.+...++-+.+.+..|+..+..
T Consensus       104 pm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~  183 (314)
T KOG1444|consen  104 PMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSA  183 (314)
T ss_pred             hHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999999999999999999999999999888765 4455444443 22333 478999999999999999999876542


Q ss_pred             C-hhHHHHHHHHHHHHHHHHHHHHhcCC-C--Ccccc-ccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhh
Q 023813          181 P-AELLVAFLYNLFAAVIAVPLCLFAEP-D--LSLWR-LKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKP  255 (277)
Q Consensus       181 ~-~~~~~~~~~~~~g~i~~~~~~~~~~~-~--~~~~~-~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~  255 (277)
                      + ......+|..+...+.+.+..+++++ |  ....+ ......+..+...++.+-++.|..+ +-.+..+++.-+..+.
T Consensus       184 ~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~-~ct~~~SAtT~tivG~  262 (314)
T KOG1444|consen  184 NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSF-LCTRVNSATTTTIVGA  262 (314)
T ss_pred             cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHH-HHHhhccccceeehhh
Confidence            2 12677889999999988888877654 1  00111 1112346677788887777777654 3446677777888886


Q ss_pred             hHHHHHHHHHHHHhCCcccC
Q 023813          256 LSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       256 l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ..-....+-..++.|+++++
T Consensus       263 ~n~l~t~l~~ll~~d~~~~~  282 (314)
T KOG1444|consen  263 KNKLLTYLGGLLFGDKPFTF  282 (314)
T ss_pred             hhhHHHHHHHHhcCCceech
Confidence            66666777777777777765

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.76  E-value=1.4e-07  Score=83.42  Aligned_cols=123  Identities=17%  Similarity=0.116  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVL   89 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (277)
                      ..+.++.+.++++|+...+..|... ++.+|.....   ..+.+.+.+..... + ... ...+...+..+...|+...+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~-~-~~~-~~~~~~~~~~l~~~~~~t~~  227 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLS-P-QPA-MVFSLPAIIKLLLAAAAMGF  227 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHh-c-Ccc-ccCCHHHHHHHHHHHHHHHH
Confidence            3478899999999999999999964 4578776432   33444444433322 2 111 23455667676666754488


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        90 ~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      .+.++++++++.+++.++.+.++.|++..++++++++|++++.++.|...
T Consensus       228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~l  277 (295)
T PRK11689        228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAM  277 (295)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999997766553

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.66  E-value=4.1e-07  Score=75.80  Aligned_cols=229  Identities=14%  Similarity=0.117  Sum_probs=162.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHH
Q 023813           41 YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTL  120 (277)
Q Consensus        41 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l  120 (277)
                      ..+++.++..-.+.-=.+..++ ++.+.++.   + -+.+...+.-..+.+..-+.++++.|=.+..+=-+.-|+=++++
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir-~~~~~D~t---~-~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIR-KKTEIDNT---P-TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeec-ccccccCC---c-chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            4566666665555432333333 21111111   1 12233334444788888899999998877777778889999999


Q ss_pred             HHHHhhccccccccchhhhh-hhhhheec---------cCchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-hhHHHHHH
Q 023813          121 AVLFRMEKLALRTLSTQAKI-IGTMVSIS---------VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVAFL  189 (277)
Q Consensus       121 ~~l~~~e~~~~~~~~~i~~~-~g~~~~~~---------~~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~-~~~~~~~~  189 (277)
                      ++++.|++.+|++...+..+ +|+.+..-         +.....|.++.+.+-..=..-...+.|..+++. +....+.+
T Consensus       129 GVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~  208 (337)
T KOG1580|consen  129 GVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFY  208 (337)
T ss_pred             ehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHH
Confidence            99999999999988877644 56555443         233468999999888877777788888755432 33678888


Q ss_pred             HHHHHHHHHHHHHHhcCCCCc--cccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHH
Q 023813          190 YNLFAAVIAVPLCLFAEPDLS--LWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII  267 (277)
Q Consensus       190 ~~~~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~  267 (277)
                      .++.+++.+..-..+.++-++  -+..-.+..|..+..+++ ++++++++.+.-+..-||-.-|+++...-.|+++.+++
T Consensus       209 ~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl  287 (337)
T KOG1580|consen  209 TNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL  287 (337)
T ss_pred             HHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence            999998887766666543211  111123345667777777 88999999999999999999999999999999999999


Q ss_pred             HhCCcccC
Q 023813          268 FLGDTLHL  275 (277)
Q Consensus       268 ~l~E~~~~  275 (277)
                      +++.+++.
T Consensus       288 lf~npls~  295 (337)
T KOG1580|consen  288 LFNNPLSG  295 (337)
T ss_pred             HhcCcCcH
Confidence            99998864

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.65  E-value=3.9e-07  Score=80.71  Aligned_cols=120  Identities=14%  Similarity=0.171  Sum_probs=92.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccc--cccchhhHHHHHHHHHH
Q 023813          152 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLW--RLKPDVALVSIVYSAFL  229 (277)
Q Consensus       152 ~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gv~  229 (277)
                      ...|.++.+.++++|+...+..|.. ++.| |.+..++...++.+.+.+...... +....  ...+...+. ....+.+
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~   81 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVSAV   81 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHHHH
Confidence            4579999999999999999999764 5666 699999999999887766654332 11110  011122232 2335555


Q ss_pred             hHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          230 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .....+.++++++++.+++.++...++.|++..+++++++||+++.
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~  127 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRR  127 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence            7778899999999999999999999999999999999999999875

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.64  E-value=9.5e-07  Score=80.20  Aligned_cols=121  Identities=11%  Similarity=0.065  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCchHHHHHHHHHHHHHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASKGLSY-YVFVAYSYPLATLALLPLPLIFRNTTTV---VPSFKFSILSRIILLSFIG   87 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~~~~p-~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~   87 (277)
                      +...++.++++|+...+..|..... .|| ...+++...++.+.+.+..... ++...   ....+.. ...++..++..
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~-~~~i~y~~i~t  266 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVV-EKNNPSVWIIHFDIT-LITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHH-ccCCcccceeccchH-HHHHHHHHHHH
Confidence            6678888999999999999987654 655 4667777777777666555543 22111   0111222 22233344444


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccc
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLS  135 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~  135 (277)
                      .+++.++++++++.+++.++...++.|+++.++++++++|++++.++.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i  314 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI  314 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence            678899999999999999999999999999999999999999999543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.63  E-value=1.4e-07  Score=82.97  Aligned_cols=130  Identities=16%  Similarity=0.029  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYY----VFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSF   85 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~----~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   85 (277)
                      .++..+.++++++|+...+..|... ++.+|.    ....+.+...++.+.+....+ +++ . ...+..++......+.
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~  218 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAA-LGVPAFYSALGYLGIGFLAMGWPFLLLYLKR-HGR-S-MFPYARQILPSATLGG  218 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccc-cchhcccccHHHHHHHHHHHHHHHHHHHHHH-hcc-c-hhhhHHHHHHHHHHHH
Confidence            4566778889999999999999753 234442    233334433322222322222 111 1 1112223344445555


Q ss_pred             HH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhh-hhh
Q 023813           86 IG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKI-IGT  143 (277)
Q Consensus        86 ~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~-~g~  143 (277)
                      +. .+.+.++++++++.+++.++.+.++.|++..++++++++|++++.++.|...+ .|+
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv  278 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGL  278 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhH
Confidence            55 88999999999999999999999999999999999999999999988776533 443

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.55  E-value=2.5e-06  Score=75.62  Aligned_cols=128  Identities=16%  Similarity=0.152  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCchHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKG--LSYYVFVAYSYPLATLALLPLPLIFRNTTTV----VPSFKFSILSRIILL   83 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~--~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   83 (277)
                      ..+.++.+.++++|+...+..|...+++  .+.....++-..++.+.+....... +....    ....+..++..++..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhhhccCCHHHHHHHHHH
Confidence            4688899999999999999999864332  1223334444444444333332222 21110    013456778888888


Q ss_pred             HHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh
Q 023813           84 SFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA  138 (277)
Q Consensus        84 g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~  138 (277)
                      |++. .+.+.+++.++++.++++++.+.++.|++..++++++++|++++.++.|..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~  276 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAV  276 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence            9988 899999999999999999999999999999999999999999999655443

>TIGR00688 rarD rarD protein

Probab=98.54  E-value=1.1e-06  Score=76.07  Aligned_cols=119  Identities=10%  Similarity=0.140  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCC---Cccccccchhh-HHHHHHHHHH
Q 023813          154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPD---LSLWRLKPDVA-LVSIVYSAFL  229 (277)
Q Consensus       154 ~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~---~~~~~~~~~~~-~~~l~~~gv~  229 (277)
                      .|..+.+.++++|+...+..|. ..+.| |.++.++..+++++.+.+......+.   ...++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999997 45666 69999999999988776655433210   00111111112 3344555654


Q ss_pred             hHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          230 GPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                       ....+.++++++++.+++.++...++.|++..+++++++||+++.
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~  124 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISR  124 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence             578889999999999999999999999999999999999999985

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.48  E-value=9e-07  Score=78.53  Aligned_cols=125  Identities=15%  Similarity=0.110  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchH---------HHHH
Q 023813            9 EALLLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKF---------SILS   78 (277)
Q Consensus         9 ~~~~~~~ll~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~---------~~~~   78 (277)
                      +..+.+..++++++|+...+..|...++ +.||..+..+-+..+++.+.|+.... +.... ...+.         ....
T Consensus       143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~  220 (302)
T TIGR00817       143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT-EGPPF-LPHGFMQAISGVNVTKIY  220 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHH-cchHH-HHHHHHHhhcccCchHHH
Confidence            4558888999999999999999997641 58999999999999999999987654 21110 00000         0111


Q ss_pred             H-HHHHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccc
Q 023813           79 R-IILLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLS  135 (277)
Q Consensus        79 ~-~~~~g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~  135 (277)
                      . .+..+... ...+.+++.+++++++.++++..+..|+++.++++++++|+++..++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~  279 (302)
T TIGR00817       221 TVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVF  279 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHH
Confidence            1 22223222 334467788999999999999999999999999999999999998543

specificities overlap.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.38  E-value=6.5e-05  Score=65.14  Aligned_cols=231  Identities=14%  Similarity=0.085  Sum_probs=159.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHH
Q 023813           39 SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTF  118 (277)
Q Consensus        39 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~  118 (277)
                      +|..+++..-+.+.++-.....   .++..  ...++.+..+...++...+...|-+.+++|.+=.+-.+==..=-+=++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~---~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLK---WWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHh---ccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            6777788877777766544332   22222  122445666667788888899999999999975444443332223345


Q ss_pred             HHHHHHhhccccccccchhhhhhhhhheec------------cCchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-hhHH
Q 023813          119 TLAVLFRMEKLALRTLSTQAKIIGTMVSIS------------VSNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELL  185 (277)
Q Consensus       119 ~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~------------~~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~-~~~~  185 (277)
                      +.+.++.|.|.++++..-...+.+++..+.            +++...|..++...-+.=+.-+..++++.+++. ++..
T Consensus       125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~  204 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLH  204 (327)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhH
Confidence            888899999999987664444433333332            134468999988888888888889999887643 3588


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CCccccccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHH
Q 023813          186 VAFLYNLFAAVIAVPLCLFAEP--DLSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAI  263 (277)
Q Consensus       186 ~~~~~~~~g~i~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i  263 (277)
                      ++++.++++++.........+.  +..++-..+++.+.-++.... ..++++.+.++-+++-|+-..+.++..-=.+++.
T Consensus       205 mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~  283 (327)
T KOG1581|consen  205 MMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIM  283 (327)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHH
Confidence            8999999999887776443221  111222223444555555555 4479999999999999999999999999999999


Q ss_pred             HHHHHhCCcccC
Q 023813          264 TGIIFLGDTLHL  275 (277)
Q Consensus       264 ~~~~~l~E~~~~  275 (277)
                      ++.+.+|.+++.
T Consensus       284 lS~i~f~h~~s~  295 (327)
T KOG1581|consen  284 LSCIVFGHPLSS  295 (327)
T ss_pred             HHHHHhCCccch
Confidence            999999988764

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.38  E-value=1.1e-05  Score=64.02  Aligned_cols=125  Identities=19%  Similarity=0.266  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC---Cc-------hHHH
Q 023813           13 LSATVAVECTTVGLNTLFKAAASK------GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVP---SF-------KFSI   76 (277)
Q Consensus        13 ~~~ll~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~---~~-------~~~~   76 (277)
                      ++..+.+.++-+...+..|...++      ..+|.++..+-...+.+.+.+..... ++.+...   ..       ..+.
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLL-EGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHhhhhhhcchHHH
Confidence            567788999999999999998876      68999999999999999999988776 3322100   01       1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh
Q 023813           77 LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA  138 (277)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~  138 (277)
                      +..++..|+++...+.+.+..++++++.+.++....-.+.+.++++++++|+++++++.|+.
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~  142 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIV  142 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHH
Confidence            45556667777889999999999999999999999999999999999999999999777665

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.37  E-value=7.8e-06  Score=64.84  Aligned_cols=120  Identities=13%  Similarity=0.299  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh------CChhHHHHHHHHHHHHHHHHHHHHhcCCCCc--cc-ccc------chhh
Q 023813          155 GGFLLAAQCFLLSIWSILLTQIINI------YPAELLVAFLYNLFAAVIAVPLCLFAEPDLS--LW-RLK------PDVA  219 (277)
Q Consensus       155 G~~l~l~~a~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~-~~~------~~~~  219 (277)
                      |.++++.++++.|++++..|+..++      ..++.....+....+.+.+.+.+...|++..  .. +..      ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999988655      2356888889999999999999888775321  11 110      1233


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          220 LVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       220 ~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      +..++..|+.+ ..-....+..+++.+|...++...+..+...++|++++||++|.
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~  135 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP  135 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH
Confidence            44555555533 45555677888999999999999999999999999999999885

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.36  E-value=3.5e-05  Score=66.61  Aligned_cols=190  Identities=16%  Similarity=0.105  Sum_probs=127.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhhccccccccc-hh---h-hhhhhhheec
Q 023813           75 SILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLS-TQ---A-KIIGTMVSIS  148 (277)
Q Consensus        75 ~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~-~~P~~~~~l~~l~~~e~~~~~~~~-~i---~-~~~g~~~~~~  148 (277)
                      +.+...++.|++=.+.|...+.+.++.+.+.+.=+.. .+=+.+.+.+.++++|.-+.+++. +.   . .++|+.+.-.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            6677777777777899999999999999888776654 455567889999999999887764 22   1 1233322222


Q ss_pred             -----c-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchh
Q 023813          149 -----V-----SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDV  218 (277)
Q Consensus       149 -----~-----~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~  218 (277)
                           +     .+...|....+.+++.|..|.+..|..  +.+ +.....-| .+|-++.........++. .++   ..
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~-~~~~~lPq-aiGm~i~a~i~~~~~~~~-~~~---k~  194 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVS-GWSAFLPQ-AIGMLIGAFIFNLFSKKP-FFE---KK  194 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCC-hhHhHHHH-HHHHHHHHHHHhhccccc-ccc---cc
Confidence                 1     123568999999999999999997653  333 35544433 333333322222211111 111   12


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCccc
Q 023813          219 ALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       219 ~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~  274 (277)
                      .|..++ .|+ .=.++-.++..+.++.|.+.+=.++-+.++.+.+.|.+++||+=+
T Consensus       195 ~~~nil-~G~-~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt  248 (269)
T PF06800_consen  195 SWKNIL-TGL-IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKT  248 (269)
T ss_pred             hHHhhH-HHH-HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence            233322 233 235677888999999999999999999999999999999999743

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.33  E-value=9.7e-06  Score=71.62  Aligned_cols=120  Identities=13%  Similarity=-0.057  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHH----HHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYP----LATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSF   85 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   85 (277)
                      .|+....+++.+.++......|..  + .||.+.++....    .+.+++.++   + + . + +. +.+.....+..|+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~-~-~~-~~~~~~~~~~~Gi  219 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH---I-L-A-K-PL-KKYAILLNILPGL  219 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH---h-c-c-c-ch-HHHHHHHHHHHHH
Confidence            679999999999999999999964  3 799988666654    444444333   1 1 1 2 22 3334445555777


Q ss_pred             HHHHHHHHHHHhcc-ccChhhHhhhhhhhHHHHHHHHHHHhhcccccccc----chhhhh
Q 023813           86 IGVLSQIFGYTGIA-CSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTL----STQAKI  140 (277)
Q Consensus        86 ~~~~~~~~~~~~l~-~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~----~~i~~~  140 (277)
                      +-++.+.+|+.+.+ +.+++.++.+.+..|+..++.+++++||+.+++++    .|...+
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lI  279 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILI  279 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHH
Confidence            77888999999999 99999999999999999999999999999999988    554433

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.32  E-value=0.00023  Score=61.85  Aligned_cols=203  Identities=16%  Similarity=0.211  Sum_probs=129.7

Q ss_pred             CchHHHHHH-HHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhhheec-
Q 023813           71 SFKFSILSR-IILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSIS-  148 (277)
Q Consensus        71 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~-  148 (277)
                      +.+|++..+ ....|+..++.-.+-+++++|++.+.=+..=+..++|+.+++..+.-||.+|.-..-+..+.+++..+. 
T Consensus        77 ~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~  156 (349)
T KOG1443|consen   77 VLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTY  156 (349)
T ss_pred             CCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEe
Confidence            567887765 444455558888889999999999888888889999999999999999999985443333322233332 


Q ss_pred             -cCch-hhHHHHHHHHHHHHHHHHHHHHHHHhhCC----hhHHHHHHHHHHHHHHHHHHHHhcCCCC-----ccccc-cc
Q 023813          149 -VSNW-VTGGFLLAAQCFLLSIWSILLTQIINIYP----AELLVAFLYNLFAAVIAVPLCLFAEPDL-----SLWRL-KP  216 (277)
Q Consensus       149 -~~~~-~~G~~l~l~~a~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~g~i~~~~~~~~~~~~~-----~~~~~-~~  216 (277)
                       +.++ ..|.++++.++++-++-=.......++.|    +|........-.-.+.+.+....+|++.     ..++. .+
T Consensus       157 KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~  236 (349)
T KOG1443|consen  157 KSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDT  236 (349)
T ss_pred             cccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCc
Confidence             3333 46888888887775544433333333322    3455555544444455566666666531     12221 12


Q ss_pred             hhhHHHHHHHHHHhHHHHHHH---HHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCccc
Q 023813          217 DVALVSIVYSAFLGPSFNTII---HTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       217 ~~~~~~l~~~gv~~t~~~~~~---~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~  274 (277)
                      ...+..+...+. +...++.+   =+..+.+.+.-..+++.-..-+-..++|.++.+|+++
T Consensus       237 ~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls  296 (349)
T KOG1443|consen  237 GLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLS  296 (349)
T ss_pred             cHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchh
Confidence            222333333332 33444443   2334577888889999999999999999999999987

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.24  E-value=3.4e-05  Score=67.21  Aligned_cols=123  Identities=22%  Similarity=0.152  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVA-YSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-   87 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   87 (277)
                      ..+....+.+.++|+...+..|...  ..++..... +.+..+.....+....  .+.   .+.+.+++......|+++ 
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLS--GFG---APILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhc--ccc---ccCCHHHHHHHHHHHHHHH
Confidence            5788999999999999999999765  367777776 4444222222222211  111   134567788888899998 


Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      ...+.+++.+++..+++..+.+.++.|++..++++++++|+++..++.|...
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~l  277 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAAL  277 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999997776543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.20  E-value=5e-05  Score=68.89  Aligned_cols=130  Identities=13%  Similarity=0.088  Sum_probs=92.2

Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----------CCc
Q 023813            9 EALLLSATVAVECTTVGLNTLFKAAASK------GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVV----------PSF   72 (277)
Q Consensus         9 ~~~~~~~ll~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~----------~~~   72 (277)
                      +..+.++.++++++|+...+..|...++      +.++..+..+-..++++.++|+.... +.....          ...
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-e~~~~~~~~~~~~~~~~~~  270 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF-EGKKWVPVWTNYTANMTNY  270 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhhccccc
Confidence            4568899999999999999999998753      26677777777889999988887643 211000          000


Q ss_pred             hHHHHHH-HHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           73 KFSILSR-IILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        73 ~~~~~~~-~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      ....... .+..++...+.+.+-|++++++++.+.++..++-|+++.++++++++|++++.++.|.+.
T Consensus       271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~l  338 (350)
T PTZ00343        271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAV  338 (350)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHH
Confidence            1111111 122222224444555579999999999999999999999999999999999997666553

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.12  E-value=9.7e-06  Score=61.12  Aligned_cols=62  Identities=18%  Similarity=0.120  Sum_probs=54.1

Q ss_pred             HHHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhh
Q 023813           81 ILLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIG  142 (277)
Q Consensus        81 ~~~g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g  142 (277)
                      ...++++ +.++.++..++++.|.+.+..+.++.|+++.+++++++|||++++++.|+..++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~  102 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG  102 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            3344455 7899999999999999999999999999999999999999999999988875533

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.04  E-value=6e-05  Score=63.75  Aligned_cols=133  Identities=16%  Similarity=0.110  Sum_probs=108.0

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (277)
                      ..|..+..+.+.+..||+..-+..|.+- +..|-.+-+..-+.+++++..|+.... ....   -.+.+-+..-+..+++
T Consensus       144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~-ag~~---l~~p~ll~laLgvavl  218 (292)
T COG5006         144 SLDPVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQ-AGPA---LFSPSLLPLALGVAVL  218 (292)
T ss_pred             cCCHHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhh-cchh---hcChHHHHHHHHHHHH
Confidence            4455678888999999999999999974 346777888899999999999997643 2111   1234445556677888


Q ss_pred             H-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhh
Q 023813           87 G-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTM  144 (277)
Q Consensus        87 ~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~  144 (277)
                      . .+.+.+...++++.+...-+++.++.|.+.++.++++++|.+++.||.++..++...
T Consensus       219 SSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAs  277 (292)
T COG5006         219 SSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAAS  277 (292)
T ss_pred             hcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            8 899999999999999999999999999999999999999999999999887554433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.76  E-value=9.6e-05  Score=55.78  Aligned_cols=56  Identities=16%  Similarity=0.310  Sum_probs=47.9

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          219 ALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       219 ~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .+...+..|.+....++.+|.++.++.++ .+++...+.|+++.+++++++||+++.
T Consensus        33 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~   88 (113)
T PF13536_consen   33 PWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSP   88 (113)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence            34455556776667899999999999995 888999999999999999999999985

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.75  E-value=0.015  Score=52.48  Aligned_cols=260  Identities=14%  Similarity=0.049  Sum_probs=140.3

Q ss_pred             HhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHHHHHH-HHHHhhccCCC-C-CCchHHHHHHHHHH
Q 023813            8 REALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYS-YPLATLALLP-LPLIFRNTTTV-V-PSFKFSILSRIILL   83 (277)
Q Consensus         8 ~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R-~~~a~l~l~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~   83 (277)
                      +-..+++..+++.++||+.++-.|. .++ -+ .+.-+.- ..++.++.-. ..... .+.-. . ...+.+.+..-++.
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~wl~~~~~~g~~~-~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSWLILPWLIAALL-LPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHhcCHHHHHHHHHH
Confidence            3466899999999999999999998 343 33 1111110 1111111110 00000 11100 0 12345556666666


Q ss_pred             HHHHHHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccc---cccccc----hhh-hhhhhhheec-----c
Q 023813           84 SFIGVLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKL---ALRTLS----TQA-KIIGTMVSIS-----V  149 (277)
Q Consensus        84 g~~~~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~---~~~~~~----~i~-~~~g~~~~~~-----~  149 (277)
                      |++=...+..++.++++.+.+.+.-+ ..++=+..+++..++++|-.   +..+..    +++ ..+|+.+.-.     +
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            76668999999999999999887666 44778888888888888765   333322    111 1223222211     1


Q ss_pred             -------C---chhhHHHHHHHHHHHHHHHH-------HHHHHHH-hhCChhHHHHHHH---HHHHHHHH-HHHHHh---
Q 023813          150 -------S---NWVTGGFLLAAQCFLLSIWS-------ILLTQII-NIYPAELLVAFLY---NLFAAVIA-VPLCLF---  204 (277)
Q Consensus       150 -------~---~~~~G~~l~l~~a~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~---~~~g~i~~-~~~~~~---  204 (277)
                             +   +...|...++++.+.+++|+       ...+... .+.+ +.....-+   ++.|+.+. .+++..   
T Consensus       160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~~~n~~~~~~~~~  238 (345)
T PRK13499        160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGAITNLGFCFIRLA  238 (345)
T ss_pred             cccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                   1   23589999999999999999       4443321 1222 22222222   22444433 333332   


Q ss_pred             cCCCC---ccccccc---hhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehh---hh-hhHHHHHHHHHHHHhCCccc
Q 023813          205 AEPDL---SLWRLKP---DVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAI---FK-PLSVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       205 ~~~~~---~~~~~~~---~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~---~~-~l~pv~a~i~~~~~l~E~~~  274 (277)
                      .+.+.   .+.....   .......+..|+ .=.+++.+|..+-++.|......   +. -+..+++.+.|. ++||.=+
T Consensus       239 k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~  316 (345)
T PRK13499        239 KNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKG  316 (345)
T ss_pred             hCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccC
Confidence            11111   1111100   011111122222 33566677777778877664444   44 555688999998 5999744

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.71  E-value=0.001  Score=57.23  Aligned_cols=120  Identities=17%  Similarity=0.180  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhh-hhhhheec----------c--
Q 023813           83 LSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKI-IGTMVSIS----------V--  149 (277)
Q Consensus        83 ~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~-~g~~~~~~----------~--  149 (277)
                      -+++-..+..+.|.|+.+|+++.-..+=...-+|+.+++.-+++.+++.++|.++... .|.++.-.          .  
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            4566677788899999999998888888889999999999999999999999998754 55443332          0  


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-hhHHHHHHHHHHHHHHHHHHH
Q 023813          150 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVAFLYNLFAAVIAVPLC  202 (277)
Q Consensus       150 ~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~g~i~~~~~~  202 (277)
                      ++-..|+++.+.+-+.-|+..+.-+|..++.+ +|.....|+.++|.++....+
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~  225 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLA  225 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHH
Confidence            22357999999999999999999888766533 679999999999965554443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.67  E-value=0.00054  Score=52.99  Aligned_cols=112  Identities=19%  Similarity=0.162  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHH-HHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIG-VLS   90 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   90 (277)
                      +++.++...++=+....+.|.+.++ .++.+.... . .      ......  .    .+      ..++..|+.. .++
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~------~~~~~~--~----~p------~~~i~lgl~~~~la   61 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I------AALLAF--G----LA------LRAVLLGLAGYALS   61 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H------HHHHHH--h----cc------HHHHHHHHHHHHHH
Confidence            5777777777778889999998765 444332221 1 0      000000  0    01      1245568877 899


Q ss_pred             HHHHHHhccccChhhHhhhhhhhHHHHHHHHHH--Hhhccccccccchhhhh-hhhh
Q 023813           91 QIFGYTGIACSSPTLSSAISNLTPAFTFTLAVL--FRMEKLALRTLSTQAKI-IGTM  144 (277)
Q Consensus        91 ~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l--~~~e~~~~~~~~~i~~~-~g~~  144 (277)
                      +.++..++++.+.+.+.-+.+..+..+.+.++.  ++||+++++++.|+..+ +|+.
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~  118 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVW  118 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999999998888888884  79999999988887754 4433

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.66  E-value=0.0029  Score=56.11  Aligned_cols=238  Identities=13%  Similarity=0.122  Sum_probs=129.0

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (277)
                      .++.-+....+.++++-+......|....+ .+.   .-.               + +++.. ++. .++..+  ..|+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~-~~~~~-~~~-l~~~~W--~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------R-AGSGG-RSY-LRRPLW--WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------c-ccchh-hHH-HhhHHH--HHHHH
Confidence            455667788888888889888888876432 110   000               0 00000 111 122222  23444


Q ss_pred             H-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec----cCc-h-------
Q 023813           87 G-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS----VSN-W-------  152 (277)
Q Consensus        87 ~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~----~~~-~-------  152 (277)
                      . .++..+-+.++.+.|++..+=+....-++..+++..++|||++++++.|.. ...|..+.+.    +++ .       
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~  138 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIA  138 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHH
Confidence            4 667778889999999999888888899999999999999999999999876 5577655543    110 0       


Q ss_pred             ---hhHH--HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHH-------HHHHHhcCCCCccccccchhhH
Q 023813          153 ---VTGG--FLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIA-------VPLCLFAEPDLSLWRLKPDVAL  220 (277)
Q Consensus       153 ---~~G~--~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~-------~~~~~~~~~~~~~~~~~~~~~~  220 (277)
                         ..+.  ...+....+..+.....+|..++  +.......+.++|+...       ..+....+++   -+..++..|
T Consensus       139 ~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~---~~f~~~~~y  213 (300)
T PF05653_consen  139 LLSQPGFLVYFILVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD---NQFTYPLTY  213 (300)
T ss_pred             HhcCcceehhHHHHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc---hhhhhhHHH
Confidence               0111  11111111112222222221111  11111111222222111       1111111111   112233345


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhh-HHHHHHHHHHHHhCCccc
Q 023813          221 VSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPL-SVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       221 ~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l-~pv~a~i~~~~~l~E~~~  274 (277)
                      ..++.+ +.+........++++++.|++.+.+..+. --.++.+-|.++++|.-+
T Consensus       214 ~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~  267 (300)
T PF05653_consen  214 LLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSR  267 (300)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhccccc
Confidence            444333 33556666678999999999998887776 455666667778887543

>TIGR00803 nst UDP-galactose transporter

Probab=97.66  E-value=0.0003  Score=59.50  Aligned_cols=119  Identities=11%  Similarity=0.088  Sum_probs=70.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHHHHHHHhcCCCC-cccc---ccchhhHHHHHHH
Q 023813          152 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAEL-LVAFLYNLFAAVIAVPLCLFAEPDL-SLWR---LKPDVALVSIVYS  226 (277)
Q Consensus       152 ~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~g~i~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~~  226 (277)
                      ...|....+.++++-+.-.+.+++..|+.+... ........++.+...........+. ..+.   -.+...|.     
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  157 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI-----  157 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH-----
Confidence            356667777777777777888887755543211 1111112222222111111111110 0111   11111221     


Q ss_pred             HHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          227 AFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       227 gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      -++..+.+..+..+.+|+.|+...+.....+++++.+++++++||+++.
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~  206 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISS  206 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccH
Confidence            1234566777888999999999999999999999999999999999985

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.62  E-value=0.00086  Score=51.85  Aligned_cols=101  Identities=18%  Similarity=0.168  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHH
Q 023813          154 TGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSF  233 (277)
Q Consensus       154 ~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~  233 (277)
                      .|.++.+.+.++-+..++.-|+-.++.++ ......     .. ...... .  +           ....+++|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-----~~-~~~~~~-~--~-----------p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-----FI-AALLAF-G--L-----------ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-----HH-HHHHHH-h--c-----------cHHHHHHHHHHHHH
Confidence            36778889999999999999988777653 332211     00 011110 0  0           01136778889999


Q ss_pred             HHHHHHHHhhccCceeehhhhhhHHHHHHHHHHH--HhCCcccC
Q 023813          234 NTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGII--FLGDTLHL  275 (277)
Q Consensus       234 ~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~--~l~E~~~~  275 (277)
                      ++.+|.+++++.|.+.+.++....++...+.++.  ++||++|+
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~  104 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSL  104 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            9999999999999999999999999888888885  89999986

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.60  E-value=0.00042  Score=57.71  Aligned_cols=226  Identities=14%  Similarity=0.231  Sum_probs=149.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHH
Q 023813           41 YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTL  120 (277)
Q Consensus        41 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l  120 (277)
                      +.+.+.+.+...+.+..+-..+   -   .+++.++...++..+++-..--+.---+++|.+...=++.-+++.+.++..
T Consensus        38 flll~vQSlvcvv~l~iLk~l~---~---~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAyg  111 (309)
T COG5070          38 FLLLAVQSLVCVVGLLILKFLR---L---VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYG  111 (309)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh---H---hheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhh
Confidence            3556666666655555442221   1   112233344444556665544555567899999999999999999999999


Q ss_pred             HHHHhhccccccccchhh-hhhhhhheeccC---------chhhHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHH
Q 023813          121 AVLFRMEKLALRTLSTQA-KIIGTMVSISVS---------NWVTGGFLLAAQCFLLSIWSILLTQIINI--YPAELLVAF  188 (277)
Q Consensus       121 ~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~~---------~~~~G~~l~l~~a~~~a~~~v~~~~~~~~--~~~~~~~~~  188 (277)
                      ..++++.|++...-.... .++...++-.++         ..+.|-++....++.-|.|.+..|+..|-  ..+ ....+
T Consensus       112 Evl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmf  190 (309)
T COG5070         112 EVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMF  190 (309)
T ss_pred             HHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHH
Confidence            999999998876433211 111111111111         23578889999999999999988876542  223 77799


Q ss_pred             HHHHHHHHHHHHHHHhcCC-CCcccc-ccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHH
Q 023813          189 LYNLFAAVIAVPLCLFAEP-DLSLWR-LKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGI  266 (277)
Q Consensus       189 ~~~~~g~i~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~  266 (277)
                      |..+.+..++..+.+++|+ ++.... .-+.+.+.+++..|+.+-+++| +-.|-++-.+++.-|.++-+.-.-..+-|.
T Consensus       191 YnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy-~saWcvrVtSSTtySMvGALNKlp~alaGl  269 (309)
T COG5070         191 YNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGL  269 (309)
T ss_pred             HhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence            9999999999999888764 332222 1233456677778875555554 345567778888888888888878888889


Q ss_pred             HHhCCccc
Q 023813          267 IFLGDTLH  274 (277)
Q Consensus       267 ~~l~E~~~  274 (277)
                      +++||+.+
T Consensus       270 vffdap~n  277 (309)
T COG5070         270 VFFDAPVN  277 (309)
T ss_pred             hhcCCchh
Confidence            99998865

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.45  E-value=0.0011  Score=54.19  Aligned_cols=92  Identities=18%  Similarity=0.220  Sum_probs=79.3

Q ss_pred             HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhhhhhhheec--c---CchhhHHHHHHHH
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSIS--V---SNWVTGGFLLAAQ  162 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~~--~---~~~~~G~~l~l~~  162 (277)
                      .+.++.|..+++.++++.++.+....-.|+.+++++.+++++..-++.+....+|+++.+.  +   .+.+.|+.....+
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~S  143 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGS  143 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHH
Confidence            6788999999999999999999999999999999999999999987777666666555554  1   2346899999999


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 023813          163 CFLLSIWSILLTQIINI  179 (277)
Q Consensus       163 a~~~a~~~v~~~~~~~~  179 (277)
                      ++.-|.|.+.-|+....
T Consensus       144 A~~aAlYKV~FK~~iGn  160 (290)
T KOG4314|consen  144 AFMAALYKVLFKMFIGN  160 (290)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999998754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.43  E-value=0.0024  Score=57.38  Aligned_cols=138  Identities=13%  Similarity=-0.014  Sum_probs=100.8

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCc--hHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSF--KFSILSRIILLS   84 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g   84 (277)
                      .++.++.+..+.++.++|.+.+.-+..+++ .|+.++..+=-+++.++..+..... +++.. .++  +.+....++.-+
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i-~~~~w~~~~~~~~v~~~  240 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAIL-ERSGI-ESIHWTSQVIGLLVGYA  240 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhh-hccCCChhhHHHHHHHH
Confidence            466889999999999999999999998765 8999988888888888888777665 55443 222  333333333333


Q ss_pred             HHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh-hhhhhhee
Q 023813           85 FIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTMVSI  147 (277)
Q Consensus        85 ~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~~~~  147 (277)
                      +.....+.+.-..++.++|....+=.-+..++..+.+.+++||+++|....+... .+|.++..
T Consensus       241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~  304 (334)
T PF06027_consen  241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN  304 (334)
T ss_pred             HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence            3335566666778888888877776677889999999999999999987766553 35544443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.41  E-value=0.00098  Score=57.75  Aligned_cols=120  Identities=13%  Similarity=-0.013  Sum_probs=87.1

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI   86 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (277)
                      ++..|+++.++.+.+.+.....+.|..   +++|....+=. .++.++-..+.... .++    +...|+..+-+..|++
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~-~~~----~~~~k~~~~nil~G~~  204 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLF-SKK----PFFEKKSWKNILTGLI  204 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhc-ccc----cccccchHHhhHHHHH
Confidence            445778999999999988888888863   37887776644 33333322222221 111    1122333444566888


Q ss_pred             HHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccc
Q 023813           87 GVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLS  135 (277)
Q Consensus        87 ~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~  135 (277)
                      -+..+.+++.+.+..+.+.+-.+.++.++..++.+.+++||+-++|++.
T Consensus       205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~  253 (269)
T PF06800_consen  205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMI  253 (269)
T ss_pred             HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHH
Confidence            7889999999999999999999999999999999999999999988664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.40  E-value=0.0017  Score=56.30  Aligned_cols=121  Identities=14%  Similarity=0.186  Sum_probs=92.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCcccc-ccchhhHHHHHHHHHHh
Q 023813          152 WVTGGFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWR-LKPDVALVSIVYSAFLG  230 (277)
Q Consensus       152 ~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gv~~  230 (277)
                      ...|.++++.+-+.|...-...|-+ ++.| +.++..+-.+.+...+........+....++ ..+++.+......+.. 
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence            3579999999999999999887654 5566 5888888888888777666555432211222 2234456665655553 


Q ss_pred             HHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          231 PSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       231 t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      -......|.|+.++.....+|+=.++.|.+.+++|.+++||+++.
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~  126 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSR  126 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccH
Confidence            367888999999999999999999999999999999999999975

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.25  E-value=0.004  Score=53.56  Aligned_cols=235  Identities=13%  Similarity=0.166  Sum_probs=130.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhccCCC--CC--CchHHHHHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhH
Q 023813           39 SYYVFVAYSYPLATLALLPLPLIFRNTTTV--VP--SFKFSILSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTP  114 (277)
Q Consensus        39 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P  114 (277)
                      .|..+..++++....+...+....++-+.+  .+  +++.+....+.-+++.-.+.-.+=..+++|.+++-=-+==+++-
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence            578889999988887776665443111111  01  23222222333333332222223334556665443333333566


Q ss_pred             HHHHHHHHHHhhccccccccchhh-hhhhhhheeccC----c-hhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-hhHHHH
Q 023813          115 AFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSISVS----N-WVTGGFLLAAQCFLLSIWSILLTQIINIYP-AELLVA  187 (277)
Q Consensus       115 ~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~~~----~-~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~-~~~~~~  187 (277)
                      +|+.++.++++|+|-+..-..+.. .+.|-.+++-.+    . .+.|.+++..++++-|+..+..|+.....+ .-+..+
T Consensus       140 vFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt  219 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLT  219 (347)
T ss_pred             hHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhH
Confidence            799999999999998776322111 111211111111    1 368999999999999999999987654433 236888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCcccc---ccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHH
Q 023813          188 FLYNLFAAVIAVPLCLFAEPDLSLWR---LKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAIT  264 (277)
Q Consensus       188 ~~~~~~g~i~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~  264 (277)
                      .|..+.+.++..+...+.++-...+.   ......|..+...|+++-.++|.- .+-+|-.+|-+=.+...---.-=.++
T Consensus       220 ~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvl  298 (347)
T KOG1442|consen  220 AYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVL  298 (347)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHH
Confidence            99999999988888776653111122   112234666666666554444432 11233444444444444444444566


Q ss_pred             HHHHhCCccc
Q 023813          265 GIIFLGDTLH  274 (277)
Q Consensus       265 ~~~~l~E~~~  274 (277)
                      ++.+++|.-+
T Consensus       299 Av~~y~E~ks  308 (347)
T KOG1442|consen  299 AVAYYSETKS  308 (347)
T ss_pred             HHHHHHHHhh
Confidence            7777887654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.21  E-value=0.0054  Score=54.46  Aligned_cols=127  Identities=17%  Similarity=0.118  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHH--hhccCCCCCCc---hHHHHHHHHHHHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLI--FRNTTTVVPSF---KFSILSRIILLSF   85 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~g~   85 (277)
                      +++.++.+.++=|...+..+...++ +.++.+..++-..++.+...+....  .++-... .+.   +...+..++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-IRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-HHHHHHhHHHHHHHHHHHH
Confidence            8889999999999999999998854 7899999999999999988877766  2111110 011   1223455666777


Q ss_pred             HHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           86 IGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        86 ~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      .++.++.+.+.-.++.++...+++..+--+++.+++.+++++++++.+|.|+..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~l  287 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVL  287 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHH
Confidence            778888888889999999999999999999999999999999999997776653

; GO: 0055085 transmembrane transport

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.12  E-value=0.0025  Score=47.96  Aligned_cols=49  Identities=8%  Similarity=0.017  Sum_probs=44.8

Q ss_pred             HHHhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          227 AFLGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       227 gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ++...+.++.++..++++.+.+.+.+..++.++++.+.|++++||++|+
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~   91 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSP   91 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            3456678999999999999999999999999999999999999999986

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.72  E-value=0.017  Score=50.88  Aligned_cols=237  Identities=13%  Similarity=0.104  Sum_probs=131.6

Q ss_pred             hhhhHhHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHH
Q 023813            4 RKFFREALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILL   83 (277)
Q Consensus         4 ~~~~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (277)
                      ++.+++.++....+.+..+.|+++..-|.+..+ ...   ...               | ..... .+. .++..+  ..
T Consensus        14 ~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~---------------r-a~~gg-~~y-l~~~~W--w~   69 (335)
T KOG2922|consen   14 RMSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGL---------------R-AGEGG-YGY-LKEPLW--WA   69 (335)
T ss_pred             hhccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hcc---------------c-ccCCC-cch-hhhHHH--HH
Confidence            344566777888888899999999999987643 100   000               1 11111 122 123222  23


Q ss_pred             HHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec---cCc-------
Q 023813           84 SFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS---VSN-------  151 (277)
Q Consensus        84 g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~---~~~-------  151 (277)
                      |++- .++...=|-+..+.|++..+-+..+.-+..++++..++|||+++....|.. .++|..+.+.   .++       
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e  149 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE  149 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence            6654 677777778888999999999999999999999999999999999666654 4566555544   000       


Q ss_pred             -h----hhHH---HHHHHHHHHHHHHHHHHHHHHhhCC--hhHHHHHHHHHHHHHH-------HHHHHHhcCCCCccccc
Q 023813          152 -W----VTGG---FLLAAQCFLLSIWSILLTQIINIYP--AELLVAFLYNLFAAVI-------AVPLCLFAEPDLSLWRL  214 (277)
Q Consensus       152 -~----~~G~---~l~l~~a~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~g~i~-------~~~~~~~~~~~~~~~~~  214 (277)
                       +    ..+.   ...+...++.=.+.     ..+++.  ..+.....+.+.|...       ...+-...++++   +.
T Consensus       150 l~~~~~~~~Fliy~~~iil~~~il~~~-----~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~---ql  221 (335)
T KOG2922|consen  150 VWELATEPGFLVYVIIIILIVLILIFF-----YAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN---QL  221 (335)
T ss_pred             HHHHhcCccHHHHHHHHHHHHHHHhee-----ecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc---cc
Confidence             0    1111   11111111111111     112222  1233333333333110       011111122222   22


Q ss_pred             cchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceeehhhhhh-HHHHHHHHHHHHhCCcc
Q 023813          215 KPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYIAIFKPL-SVVIAAITGIIFLGDTL  273 (277)
Q Consensus       215 ~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~s~~~~l-~pv~a~i~~~~~l~E~~  273 (277)
                      ..+..|..++..+. +........+.+++..+++.+++..|. -..+++.-|.++++|--
T Consensus       222 ~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~  280 (335)
T KOG2922|consen  222 FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWS  280 (335)
T ss_pred             ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Confidence            23344555444433 445566668999999999988887776 56677777888888753

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.69  E-value=0.035  Score=47.84  Aligned_cols=243  Identities=8%  Similarity=0.077  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHh-CCCCHH--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 023813           25 GLNTLFKAAAS-KGLSYY--VFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIACS  101 (277)
Q Consensus        25 ~~~~~~k~~~~-~~~~p~--~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~  101 (277)
                      .+...-..... .++.|.  .+++.++++-.-+-+.-.... +.++  +.+++|....   ++.+-...+.+-.-++.|.
T Consensus        57 ~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~--r~iP~rtY~~---la~~t~gtmGLsn~SlgYL  130 (367)
T KOG1582|consen   57 VYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKR--RVIPWRTYVI---LAFLTVGTMGLSNGSLGYL  130 (367)
T ss_pred             HHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEee-cccc--eecchhHhhh---hHhhhhhccccCcCccccc
Confidence            34444444333 246654  566777766544333333222 1122  3455664433   4444444444444555555


Q ss_pred             ChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhh-hhhhhhheec-----cCch-hhHHHHHHHHHHHHHHHHHHHH
Q 023813          102 SPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQA-KIIGTMVSIS-----VSNW-VTGGFLLAAQCFLLSIWSILLT  174 (277)
Q Consensus       102 ~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~-~~~g~~~~~~-----~~~~-~~G~~l~l~~a~~~a~~~v~~~  174 (277)
                      +=.+-.+.-.+--+=+++.+.++-+.|.++.+..+.. ..+|.+..-.     .+++ ..|..+.-.+-++=|.-.-+++
T Consensus       131 NYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQE  210 (367)
T KOG1582|consen  131 NYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQE  210 (367)
T ss_pred             cCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHH
Confidence            4333222222222223466777777777777655432 3344332221     2344 4688888888888887777777


Q ss_pred             HHHhhCC-hhHHHHHHHHHHHHHHHHHHHHhcCCCCcccc---ccchhhHHHHHHHHHHhHHHHHHHHHHHhhccCceee
Q 023813          175 QIINIYP-AELLVAFLYNLFAAVIAVPLCLFAEPDLSLWR---LKPDVALVSIVYSAFLGPSFNTIIHTWGLRLKGPVYI  250 (277)
Q Consensus       175 ~~~~~~~-~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~~t~~~~~~~~~~~~~~~~~~~  250 (277)
                      +..+..+ +..+..+|...+|.+.+.......++-.+.|.   .++.+.....++.+. ++-++...-...++.-|+..+
T Consensus       211 k~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~a  289 (367)
T KOG1582|consen  211 KAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIA  289 (367)
T ss_pred             HHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHH
Confidence            7766544 23677888888888888777776654333333   123233444444444 556677777778888999999


Q ss_pred             hhhhhhHHHHHHHHHHHHhCCccc
Q 023813          251 AIFKPLSVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       251 s~~~~l~pv~a~i~~~~~l~E~~~  274 (277)
                      +.++..---.++++|++++.+++|
T Consensus       290 atvTTaRKavTi~lSfllFsKPfT  313 (367)
T KOG1582|consen  290 ATVTTARKAVTILLSFLLFSKPFT  313 (367)
T ss_pred             HHHHHhHhHHHHHHHHHHHcCchH
Confidence            999999999999999999999887

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.49  E-value=0.0088  Score=44.91  Aligned_cols=108  Identities=17%  Similarity=0.137  Sum_probs=72.2

Q ss_pred             HHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHH-HHHHHHHHH
Q 023813           17 VAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFI-GVLSQIFGY   95 (277)
Q Consensus        17 l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~   95 (277)
                      +++.++||..++++|.+... .++..-.. |..-....     .++          +++..     ..+. +-.+...|+
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll~----------n~~y~-----ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LLL----------NPKYI-----IPFLLNQSGSVLFF   59 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HHH----------hHHHH-----HHHHHHHHHHHHHH
Confidence            45788999999999998653 55544331 32111111     111          12211     2333 366778999


Q ss_pred             HhccccChhhHhhhh-hhhHHHHHHHHHHHhhccccccccchhhh-hhhhhhe
Q 023813           96 TGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAK-IIGTMVS  146 (277)
Q Consensus        96 ~~l~~~~~~~a~~l~-~~~P~~~~~l~~l~~~e~~~~~~~~~i~~-~~g~~~~  146 (277)
                      +.+...+.+.+.-+. +++=++|.+.++++.+|..+++++.|... ..|+.+|
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999999988885 67888889999888888888888888764 4565554

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.35  E-value=0.0094  Score=43.29  Aligned_cols=50  Identities=20%  Similarity=0.080  Sum_probs=29.3

Q ss_pred             HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccccccccchh
Q 023813           88 VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQ  137 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~~~~~~~~i  137 (277)
                      ..+++++..++++.+.+.+-.+ ..+..+.+++.+.+++||+++++++.++
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi   90 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGI   90 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhhe
Confidence            7888999999999999999555 5688999999999999999999966554

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.34  E-value=0.038  Score=41.34  Aligned_cols=57  Identities=9%  Similarity=-0.003  Sum_probs=48.0

Q ss_pred             HHHHHHHHHhccccChhhHhhhh-hhhHHHHHHHHHHHhhccccccccchhhhhhhhh
Q 023813           88 VLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTM  144 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~-~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~  144 (277)
                      ..++++.-.++++.|.+.+=.+- ...-+.+++.+.+++||++++.++.++..+++++
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GV  103 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGM  103 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence            78889999999999999987664 4777888999999999999999998887654433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.31  E-value=0.0017  Score=55.61  Aligned_cols=123  Identities=12%  Similarity=0.025  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVL   89 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (277)
                      .++....+.+.+.=+...+..|.. ..+.+....+.+=..++.+.-.+.+... ..-+  .+..+||++..+.+|++|.+
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~i-Gk~~h~~msvsyf~~i~lV~s~I~~~~i-g~~~--lP~cgkdr~l~~~lGvfgfi  265 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYI-GKNAHAIMSVSYFSLITLVVSLIGCASI-GAVQ--LPHCGKDRWLFVNLGVFGFI  265 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHh-hccccEEEEehHHHHHHHHHHHHHHhhc-ccee--cCccccceEEEEEehhhhhH
Confidence            344566666666666777777765 3457777666666666666655554333 2222  34567888888889999999


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccch
Q 023813           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST  136 (277)
Q Consensus        90 ~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~  136 (277)
                      +|.+.-.|+|.--++..++.-++.-++..+.-.++++|.+++..|.|
T Consensus       266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~G  312 (346)
T KOG4510|consen  266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVG  312 (346)
T ss_pred             HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhc
Confidence            99999999999999999999999999999999999999999985443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.25  E-value=0.00059  Score=57.66  Aligned_cols=243  Identities=15%  Similarity=0.127  Sum_probs=146.3

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 023813           12 LLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQ   91 (277)
Q Consensus        12 ~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   91 (277)
                      .++..++=++.||+.+..+...   +=.|.+-.-.-- ++++++....+.. .+    |..+.+.+..-++.|++=...|
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT-~GALifaiiv~~~-~~----p~~T~~~~iv~~isG~~Ws~GQ   73 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTT-LGALIFAIIVFLF-VS----PELTLTIFIVGFISGAFWSFGQ   73 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhcc-HHHHHHHHHHhee-ec----CccchhhHHHHHHhhhHhhhhh
Confidence            3566677889999888776542   235555443333 3444443333322 12    4456666666566666668899


Q ss_pred             HHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhhccccccccc-hhhhhhhhhhee--c---c---------CchhhH
Q 023813           92 IFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLS-TQAKIIGTMVSI--S---V---------SNWVTG  155 (277)
Q Consensus        92 ~~~~~~l~~~~~~~a~~l~~-~~P~~~~~l~~l~~~e~~~~~~~~-~i~~~~g~~~~~--~---~---------~~~~~G  155 (277)
                      ..-+.++++.+++.+.=+.+ ++=+-+.+++++.+||.-+..+.. |....+-+++++  .   +         ++...|
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkg  153 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKG  153 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhh
Confidence            99999999999999877755 455667888888999988876542 221111111111  1   1         123578


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHH
Q 023813          156 GFLLAAQCFLLSIWSILLTQII-NIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFN  234 (277)
Q Consensus       156 ~~l~l~~a~~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~  234 (277)
                      ....+.|++.|-.|.+..+... +..+ .+.-.+..|+.|++...    ....+. ..   ....|..++ -|+ .=+.+
T Consensus       154 i~~L~iSt~GYv~yvvl~~~f~v~g~s-aiLPqAiGMv~~ali~~----~~~~~~-~~---~K~t~~nii-~G~-~Wa~G  222 (288)
T COG4975         154 IVILLISTLGYVGYVVLFQLFDVDGLS-AILPQAIGMVIGALILG----FFKMEK-RF---NKYTWLNII-PGL-IWAIG  222 (288)
T ss_pred             eeeeeeeccceeeeEeeeccccccchh-hhhHHHHHHHHHHHHHh----hccccc-ch---HHHHHHHHh-hHH-HHHhh
Confidence            9999999999999999876543 1122 12223344444443322    222110 11   112233332 233 22466


Q ss_pred             HHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCccc
Q 023813          235 TIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLH  274 (277)
Q Consensus       235 ~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~  274 (277)
                      ...+..+.++.|....=.++-+..+.+.+=++++++|+=|
T Consensus       223 Nl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKt  262 (288)
T COG4975         223 NLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKT  262 (288)
T ss_pred             HHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCc
Confidence            6778888888888877667777788888889999999754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.89  E-value=0.021  Score=43.51  Aligned_cols=64  Identities=20%  Similarity=0.205  Sum_probs=52.1

Q ss_pred             HHHH-HHHHHHHHHhccccChhhHhhhh-hhhHHHHHHHHHHHhhccccccccchhhhhhhhhhee
Q 023813           84 SFIG-VLSQIFGYTGIACSSPTLSSAIS-NLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTMVSI  147 (277)
Q Consensus        84 g~~~-~~~~~~~~~~l~~~~~~~a~~l~-~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~~~~  147 (277)
                      .+.+ +.+++++..++++.|.+.+-.+. ...-+.+++.+.++++|++++.++.++..++..++.+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l  101 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI  101 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence            4444 88999999999999999988875 5788899999999999999999888887554433333

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.87  E-value=0.18  Score=45.53  Aligned_cols=125  Identities=14%  Similarity=-0.012  Sum_probs=74.0

Q ss_pred             HhHHHHHHHHHHHHHhHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHHHHH-HHHHHh--hccCC---CCCC
Q 023813            8 REALLLSATVAVECTTVGLN-------TLFKAAASKGLSYYVFVAYSYP---LATLALL-PLPLIF--RNTTT---VVPS   71 (277)
Q Consensus         8 ~~~~~~~~ll~~~~~wg~~~-------~~~k~~~~~~~~p~~~~~~R~~---~a~l~l~-~~~~~~--~~~~~---~~~~   71 (277)
                      +..|+.+.++++.+..+...       +..+.+.+.+.+|.....-.+.   ++..+.- .++..+  |+++.   .+.+
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            44788888888888777766       5666554456777766666655   5555443 333321  11111   0011


Q ss_pred             chHHHHHHH----HHHHHHHHHHHHHHHHhccccChhhHhh---hh-hhhHHHHHHHHHHHhhcccc--ccc
Q 023813           72 FKFSILSRI----ILLSFIGVLSQIFGYTGIACSSPTLSSA---IS-NLTPAFTFTLAVLFRMEKLA--LRT  133 (277)
Q Consensus        72 ~~~~~~~~~----~~~g~~~~~~~~~~~~~l~~~~~~~a~~---l~-~~~P~~~~~l~~l~~~e~~~--~~~  133 (277)
                      -+++.+.+-    .+.|+.=+..+.++.+|-+..+.+.+..   +. ++.-++.++-+. ++||+-+  +|+
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~  321 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRP  321 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccc
Confidence            122223333    4445544777888899888886665555   65 555566677676 5899988  543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=95.58  E-value=0.034  Score=41.74  Aligned_cols=61  Identities=18%  Similarity=0.081  Sum_probs=49.6

Q ss_pred             HHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccccccccchhhhhhhhh
Q 023813           84 SFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTM  144 (277)
Q Consensus        84 g~~~-~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~  144 (277)
                      .+.+ .+++.++..++++.|.+.+-.+ ....-+.+++.++++++|++++.++.++..++..+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GV   98 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGV   98 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence            4444 7888999999999999998777 44777888999999999999999888877554333

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.57  E-value=0.042  Score=40.81  Aligned_cols=57  Identities=11%  Similarity=0.017  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhccccChhhHhhhhh-hhHHHHHHHHHHHhhccccccccchhhhhhhhh
Q 023813           88 VLSQIFGYTGIACSSPTLSSAISN-LTPAFTFTLAVLFRMEKLALRTLSTQAKIIGTM  144 (277)
Q Consensus        88 ~~~~~~~~~~l~~~~~~~a~~l~~-~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g~~  144 (277)
                      ..++++...++++.|.+.+=.+-. ..-+.+++.+.+++||++++.++.++..++..+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GV   97 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGI   97 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence            788999999999999999877644 778889999999999999999988887554433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.55  E-value=0.34  Score=37.86  Aligned_cols=118  Identities=14%  Similarity=0.068  Sum_probs=74.6

Q ss_pred             HHHHHHhHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 023813           17 VAVECTTVGLNTLFKAAASKGL-SYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGY   95 (277)
Q Consensus        17 l~~~~~wg~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   95 (277)
                      +.+..+-+.+..+.-..-++ . +|..-++.-+..+.+.+..+.... +++.. ...+..+++.+ .-|++|...-.+..
T Consensus         7 ~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~-~~~~~-~~~~~~p~w~~-lGG~lG~~~V~~~~   82 (138)
T PF04657_consen    7 LLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLIT-GRPSL-ASLSSVPWWAY-LGGLLGVFFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHh-ccccc-chhccCChHHh-ccHHHHHHHHHHHH
Confidence            33333444444444333233 4 499999999999999998887776 33222 22222223333 36888888888899


Q ss_pred             HhccccChhhHhhhhhh-hHHHHHHHHHH----Hhhccccccccchhh
Q 023813           96 TGIACSSPTLSSAISNL-TPAFTFTLAVL----FRMEKLALRTLSTQA  138 (277)
Q Consensus        96 ~~l~~~~~~~a~~l~~~-~P~~~~~l~~l----~~~e~~~~~~~~~i~  138 (277)
                      ..++..+++++..+.-+ +-+...++..+    ..|++++++|..+..
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~  130 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLA  130 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHH
Confidence            99999999998887665 44444555553    356777777666554

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.34  E-value=0.038  Score=40.90  Aligned_cols=59  Identities=24%  Similarity=0.162  Sum_probs=48.6

Q ss_pred             HHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccccccccchhhhhhh
Q 023813           84 SFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIG  142 (277)
Q Consensus        84 g~~~-~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g  142 (277)
                      .+.+ ..++.+.-.+++++|.+.+=.+ ...--..+.+.++++++|+.+..++.++..++.
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~Liia   96 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILA   96 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence            3344 7888999999999999998665 457788899999999999999998888765433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.78  E-value=0.079  Score=47.20  Aligned_cols=101  Identities=15%  Similarity=0.159  Sum_probs=70.7

Q ss_pred             HhHHHHHHHHHHHHHhHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHH-HHHHHhhccCCC---C-CCchHHHHHH
Q 023813            8 REALLLSATVAVECTTVGLNTLFKAAAS---KGLSYYVFVAYSYPLATLALL-PLPLIFRNTTTV---V-PSFKFSILSR   79 (277)
Q Consensus         8 ~~~~~~~~ll~~~~~wg~~~~~~k~~~~---~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~~---~-~~~~~~~~~~   79 (277)
                      =+..+++....+.+..+...++.|..+.   .++++.++..+-.-++...++ |+.... +....   . ...+.. ...
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~-~~~~~~~~~~~~~~~~-~~~  237 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYV-EGNKFVGFLTAPWFVT-FLI  237 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhh-cccceeeeeccccchh-hHH
Confidence            3567899999999999999999999883   369999999999999999999 887664 32221   0 122233 333


Q ss_pred             HHHHHHHHHHHHHHHHHhccccChhhHhhhh
Q 023813           80 IILLSFIGVLSQIFGYTGIACSSPTLSSAIS  110 (277)
Q Consensus        80 ~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~  110 (277)
                      ....+++....+..-|+.+.+++|-+=++..
T Consensus       238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g  268 (316)
T KOG1441|consen  238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAG  268 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccCchhhhhhc
Confidence            3334466666667777788887766555444

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.72  E-value=0.31  Score=42.29  Aligned_cols=224  Identities=12%  Similarity=0.110  Sum_probs=134.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccc-cChhhHhhhhhhhHHHHHH
Q 023813           41 YVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVLSQIFGYTGIAC-SSPTLSSAISNLTPAFTFT  119 (277)
Q Consensus        41 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~-~~~~~a~~l~~~~P~~~~~  119 (277)
                      -.+++.+|++-+.-=+++---  -...+ ++++.|++...+..=   ...+.+=.+++++ ++...=.++=.-.++.+++
T Consensus        34 NLITFaqFlFia~eGlif~sk--f~~~k-~kiplk~Y~i~V~mF---F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~  107 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSK--FFTVK-PKIPLKDYAITVAMF---FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI  107 (330)
T ss_pred             eehHHHHHHHHHHhceeeecc--ccccC-CCCchhhhheehhee---eeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence            357778887766544443211  11222 567778776644321   2333444455554 3333334444557888999


Q ss_pred             HHHHHhhccccccccchhhhh-hhhhheec-------------c-C-------chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 023813          120 LAVLFRMEKLALRTLSTQAKI-IGTMVSIS-------------V-S-------NWVTGGFLLAAQCFLLSIWSILLTQII  177 (277)
Q Consensus       120 l~~l~~~e~~~~~~~~~i~~~-~g~~~~~~-------------~-~-------~~~~G~~l~l~~a~~~a~~~v~~~~~~  177 (277)
                      +++++.++|.+.+|...+..+ +|+.++-.             + +       .+..|..+...+.+.-|...+.+++.-
T Consensus       108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y  187 (330)
T KOG1583|consen  108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY  187 (330)
T ss_pred             HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999888755 77776654             0 1       134788888888888888888888776


Q ss_pred             hhCC-hhHHHHHHHHHHHHHHHHHHHH----------hcCCC-CccccccchhhHHHHHHHHHHhHHHHHHHHHHHh---
Q 023813          178 NIYP-AELLVAFLYNLFAAVIAVPLCL----------FAEPD-LSLWRLKPDVALVSIVYSAFLGPSFNTIIHTWGL---  242 (277)
Q Consensus       178 ~~~~-~~~~~~~~~~~~g~i~~~~~~~----------~~~~~-~~~~~~~~~~~~~~l~~~gv~~t~~~~~~~~~~~---  242 (277)
                      |+++ ++.+..+|.=.......+...-          -.|.. .+.....-+..|..++     ...+.++.=..++   
T Consensus       188 ~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl-----~n~L~Qy~CikgVy~L  262 (330)
T KOG1583|consen  188 QKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL-----FNVLTQYFCIKGVYIL  262 (330)
T ss_pred             HHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH-----HHHHHHHHHHHhhhhh
Confidence            5543 5567788876554433222210          00000 0001111123454443     2233344333333   


Q ss_pred             -hccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          243 -RLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       243 -~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                       .+.++-++++...+--.++.++|++.++.++|+
T Consensus       263 ~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~  296 (330)
T KOG1583|consen  263 TTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTP  296 (330)
T ss_pred             hceecceEEEEeeeHHHHHHHhheeeEecCCCCH
Confidence             455666789999999999999999999999875

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.51  E-value=0.57  Score=36.56  Aligned_cols=108  Identities=10%  Similarity=0.063  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHHHhHHHHH
Q 023813          156 GFLLAAQCFLLSIWSILLTQIINIYPAELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAFLGPSFNT  235 (277)
Q Consensus       156 ~~l~l~~a~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~t~~~~  235 (277)
                      .++.+.+..+-++....+.++.++..+|..-+.+....|.+...++....++.  +++......|+... -|++ ...--
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHHH
Confidence            45677788888899999999988877679989999999999888887776542  12111111232222 3443 34555


Q ss_pred             HHHHHHhhccCceeehhhhh-hHHHHHHHHHHH
Q 023813          236 IIHTWGLRLKGPVYIAIFKP-LSVVIAAITGII  267 (277)
Q Consensus       236 ~~~~~~~~~~~~~~~s~~~~-l~pv~a~i~~~~  267 (277)
                      ....+.++|.|++....... -+-+.+.+++.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f  111 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHF  111 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            66788889999997555444 477777777765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.31  E-value=0.19  Score=44.58  Aligned_cols=101  Identities=18%  Similarity=0.187  Sum_probs=69.3

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCh-hHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhHHHHHHHHH
Q 023813          150 SNWVTGGFLLAAQCFLLSIWSILLTQIINIYPA-ELLVAFLYNLFAAVIAVPLCLFAEPDLSLWRLKPDVALVSIVYSAF  228 (277)
Q Consensus       150 ~~~~~G~~l~l~~a~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv  228 (277)
                      .++..|..+.+.|+++.+....++|+..++.++ +.+...     .     ....        +.  + ..|+    .|.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~-----~-----~~~~--------l~--~-~~W~----~G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGS-----G-----GRSY--------LR--R-PLWW----IGL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----h-----hhHH--------Hh--h-HHHH----HHH
Confidence            456789999999999999999999987665432 011000     0     0000        00  0 1122    133


Q ss_pred             HhHHHHHHHHHHHhhccCceeehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          229 LGPSFNTIIHTWGLRLKGPVYIAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       229 ~~t~~~~~~~~~~~~~~~~~~~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      ...+++..+...++.-.+.+.++++..+.-++..+++..++||+++.
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~  104 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR  104 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH
Confidence            33345556667777889999999999999999999999999999874

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=93.83  E-value=0.15  Score=36.99  Aligned_cols=47  Identities=21%  Similarity=0.400  Sum_probs=28.3

Q ss_pred             hHHHHHHHHHHHhhccCceee-hhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          230 GPSFNTIIHTWGLRLKGPVYI-AIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~~-s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      .-++++.++..++|+.+.+.+ +...-+..+...+.|+.++||++|+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~   85 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS   85 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            557889999999999999987 55566889999999999999999874

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.32  E-value=0.4  Score=43.31  Aligned_cols=130  Identities=15%  Similarity=0.114  Sum_probs=94.5

Q ss_pred             hHhHHHHHHHHHHHHHhHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHHHhhccCCC--CCCchHHHHHHHH
Q 023813            7 FREALLLSATVAVECTTVGLNTLFKAAASKG---LSYYVFVAYSYPLATLALLPLPLIFRNTTTV--VPSFKFSILSRII   81 (277)
Q Consensus         7 ~~~~~~~~~ll~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~   81 (277)
                      .+...+.++.+++++.+|..-++.|.=..++   ++-..+-.+=-++..++++|..+.. ..-..  ..-.+..+...++
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL-~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL-DFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH-HHhccCcccCCCCceeEeee
Confidence            3446789999999999999999999865432   5565666666677777777665554 22111  1122344566677


Q ss_pred             HHHHHH-HHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchh
Q 023813           82 LLSFIG-VLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQ  137 (277)
Q Consensus        82 ~~g~~~-~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i  137 (277)
                      ..++++ .+..++|.+|.-.+++-.+++=.+++....++...++.+.++++...+|-
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGs  378 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGS  378 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHH
Confidence            789999 89999999999999999998877766667777788888888888855543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.51  E-value=1.7  Score=38.26  Aligned_cols=129  Identities=10%  Similarity=-0.040  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC---CCchHHHHHHHHHHHHH
Q 023813           11 LLLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLIFRNTTTVV---PSFKFSILSRIILLSFI   86 (277)
Q Consensus        11 ~~~~~ll~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~   86 (277)
                      .+++.+..-..+=|..+.-.+..... .+++.++.+.-.++..+.-....... +....+   -+.+..-++-++..+.+
T Consensus       172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~s~~  250 (327)
T KOG1581|consen  172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLYSTC  250 (327)
T ss_pred             HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHHHHh
Confidence            34444444444444444444444433 68999999999998888777664332 111110   11123335557778999


Q ss_pred             HHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhhh
Q 023813           87 GVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAKI  140 (277)
Q Consensus        87 ~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~  140 (277)
                      |+.+|.+.|+-++.-++-+-+.+..+-=++..+++.+.++.++++.+|.++...
T Consensus       251 gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iV  304 (327)
T KOG1581|consen  251 GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIV  304 (327)
T ss_pred             hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeee
Confidence            999999999999999999999999999999999999999999999977655433

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.04  E-value=0.2  Score=42.47  Aligned_cols=60  Identities=22%  Similarity=0.257  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccch
Q 023813           77 LSRIILLSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST  136 (277)
Q Consensus        77 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~  136 (277)
                      +..+...++.+.++|.|.|.-+.+-++-+.+++..+--+|+.+.+++++.+.++.|||.|
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlg  300 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLG  300 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHH
Confidence            445666788889999999999999999999999999999999999999999999997654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.15  E-value=1.3  Score=39.25  Aligned_cols=125  Identities=18%  Similarity=0.135  Sum_probs=86.0

Q ss_pred             HhHHHHHHHHHHHHHhHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCCchHHHHHHHHH
Q 023813            8 REALLLSATVAVECTTVGLNTLFKAAASK-GLSYYVFVAYSYPLATLALLPLPLIFRNTT----TVVPSFKFSILSRIIL   82 (277)
Q Consensus         8 ~~~~~~~~ll~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~   82 (277)
                      -+..+|.++......=....+..|.-.+. +.+-..++++-.+++.+.+.......++.+    ..+.......+....+
T Consensus       154 f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~l  233 (314)
T KOG1444|consen  154 FNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLL  233 (314)
T ss_pred             ecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHH
Confidence            34457888888888888888888887764 577778899999999888877765542211    1101112333555666


Q ss_pred             HHHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhcccccc
Q 023813           83 LSFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALR  132 (277)
Q Consensus        83 ~g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~  132 (277)
                      .|+++.+-.++-+++.++.++.+-++.....-+.+.+...++.+++.++.
T Consensus       234 Scv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~  283 (314)
T KOG1444|consen  234 SCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL  283 (314)
T ss_pred             HHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh
Confidence            77777888889999999999888877775555555555556666666665

>TIGR00803 nst UDP-galactose transporter

Probab=88.94  E-value=2.7  Score=35.23  Aligned_cols=56  Identities=11%  Similarity=-0.018  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccchhhh
Q 023813           84 SFIGVLSQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLSTQAK  139 (277)
Q Consensus        84 g~~~~~~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~  139 (277)
                      .+.++..+.|..+-+++.++..-+....+.++++.+++.++++|+++..+|.|...
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~l  214 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAIL  214 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence            44457777889999999999999999999999999999999999999997766543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=86.98  E-value=1.7  Score=33.05  Aligned_cols=49  Identities=10%  Similarity=0.272  Sum_probs=38.6

Q ss_pred             HHhHHHHHHHHHHHhhccCceee-hhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          228 FLGPSFNTIIHTWGLRLKGPVYI-AIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       228 v~~t~~~~~~~~~~~~~~~~~~~-s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      +..-+++++++..++|+.+.+.+ +...-+--+...+.|++++||++|+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~   86 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM   86 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            33557888999999999888864 33356788888999999999999863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=86.31  E-value=2  Score=32.19  Aligned_cols=46  Identities=17%  Similarity=0.168  Sum_probs=34.1

Q ss_pred             hHHHHHHHHHHHhhccCceee-hhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          230 GPSFNTIIHTWGLRLKGPVYI-AIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~~-s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .-++++.++..++|+.+.+.+ +...-+.-+...+.|++++||++|+
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~   85 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL   85 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence            446777788888888777753 3335567777888999999999875

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=84.03  E-value=0.087  Score=44.85  Aligned_cols=118  Identities=18%  Similarity=0.094  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHH
Q 023813           10 ALLLSATVAVECTTVGLNTLFKAAASKGLSYYVFVAYSYPLATLALLPLPLIFRNTTTVVPSFKFSILSRIILLSFIGVL   89 (277)
Q Consensus        10 ~~~~~~ll~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   89 (277)
                      .|+...++...+-+-..-+..+.---++.+...--+.-+.++++++...     +.  . ++. .|+...-++.|+.=+.
T Consensus       151 kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~-----~~--~-~~~-~K~t~~nii~G~~Wa~  221 (288)
T COG4975         151 KKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFF-----KM--E-KRF-NKYTWLNIIPGLIWAI  221 (288)
T ss_pred             hhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhc-----cc--c-cch-HHHHHHHHhhHHHHHh
Confidence            3455555555554443333333321234555544455556666543331     11  1 222 3444455567887788


Q ss_pred             HHHHHHHhccccChhhHhhhhhhhHHHHHHHHHHHhhccccccccch
Q 023813           90 SQIFGYTGIACSSPTLSSAISNLTPAFTFTLAVLFRMEKLALRTLST  136 (277)
Q Consensus        90 ~~~~~~~~l~~~~~~~a~~l~~~~P~~~~~l~~l~~~e~~~~~~~~~  136 (277)
                      .+.+++.+-+..+.+++=-+.++..+..++-+.+++|||-++|++..
T Consensus       222 GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~  268 (288)
T COG4975         222 GNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVY  268 (288)
T ss_pred             hHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhh
Confidence            99999999998888888888888888999999999999999998753

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=82.91  E-value=13  Score=27.71  Aligned_cols=47  Identities=11%  Similarity=0.085  Sum_probs=38.4

Q ss_pred             hHHHHHHHHHHHhhccCcee-ehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          230 GPSFNTIIHTWGLRLKGPVY-IAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~-~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      .-+++|++...++|+.+.+. -+...-+--+.+.+.+++++||++|+.
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~   91 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK   91 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            44788889999999988885 466666778888999999999999863

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=82.79  E-value=3.3  Score=30.74  Aligned_cols=46  Identities=22%  Similarity=0.400  Sum_probs=37.1

Q ss_pred             hHHHHHHHHHHHhhccCcee-ehhhhhhHHHHHHHHHHHHhCCcccC
Q 023813          230 GPSFNTIIHTWGLRLKGPVY-IAIFKPLSVVIAAITGIIFLGDTLHL  275 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~-~s~~~~l~pv~a~i~~~~~l~E~~~~  275 (277)
                      .-..+|.+...++|+.+.+. -++.+-.--+...+.|++++||++++
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~   85 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSL   85 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCH
Confidence            44678888888888888774 46677778888899999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=81.48  E-value=4.3  Score=30.10  Aligned_cols=47  Identities=23%  Similarity=0.374  Sum_probs=35.6

Q ss_pred             hHHHHHHHHHHHhhccCcee-ehhhhhhHHHHHHHHHHHHhCCcccCC
Q 023813          230 GPSFNTIIHTWGLRLKGPVY-IAIFKPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       230 ~t~~~~~~~~~~~~~~~~~~-~s~~~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      .-+.+|++...++|+.+.+. -+...-+--+.+.+.|++++||++|+.
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~   85 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA   85 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            44677788888888877774 455566777888899999999998863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	277
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.93
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.89
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.86
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.41

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.93  E-value=1e-05  Score=62.14  Aligned_cols=51  Identities=12%  Similarity=0.094  Sum_probs=37.6

Q ss_pred             HHHHhHHHHHHHHHHHhhccCceeehhh-hhhHHHHHHHHHHHHhCCcccCC
Q 023813          226 SAFLGPSFNTIIHTWGLRLKGPVYIAIF-KPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       226 ~gv~~t~~~~~~~~~~~~~~~~~~~s~~-~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      +++++++++|.+|++++|+.+++.+.++ ..+.|+++.++|++++||++|+.
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~   86 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            5677889999999999999999999998 89999999999999999999874

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.89  E-value=1.2e-05  Score=61.77  Aligned_cols=59  Identities=19%  Similarity=0.070  Sum_probs=41.3

Q ss_pred             HHHHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccccccccchhhhh
Q 023813           82 LLSFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKI  140 (277)
Q Consensus        82 ~~g~~~-~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~  140 (277)
                      +.+++. .++++++..++++.+++.+..+ .++.|++++++++++++|++++.++.|+..+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LI   94 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLI   94 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            356666 8899999999999999999888 8999999999999999999999987776644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.86  E-value=2.2e-05  Score=58.06  Aligned_cols=61  Identities=18%  Similarity=0.064  Sum_probs=53.2

Q ss_pred             HHHHHH-HHHHHHHHHhccccChhhHhhh-hhhhHHHHHHHHHHHhhccccccccchhhhhhh
Q 023813           82 LLSFIG-VLSQIFGYTGIACSSPTLSSAI-SNLTPAFTFTLAVLFRMEKLALRTLSTQAKIIG  142 (277)
Q Consensus        82 ~~g~~~-~~~~~~~~~~l~~~~~~~a~~l-~~~~P~~~~~l~~l~~~e~~~~~~~~~i~~~~g  142 (277)
                      ..+++. .+++.++..++++.|.+.+..+ ..+.|+++++.+++++||+++++++.|+..++.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~   96 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICA   96 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence            345555 8899999999999999999888 799999999999999999999998888775533

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.41  E-value=0.0002  Score=52.78  Aligned_cols=51  Identities=12%  Similarity=0.094  Sum_probs=46.3

Q ss_pred             HHHHhHHHHHHHHHHHhhccCceeehhh-hhhHHHHHHHHHHHHhCCcccCC
Q 023813          226 SAFLGPSFNTIIHTWGLRLKGPVYIAIF-KPLSVVIAAITGIIFLGDTLHLG  276 (277)
Q Consensus       226 ~gv~~t~~~~~~~~~~~~~~~~~~~s~~-~~l~pv~a~i~~~~~l~E~~~~~  276 (277)
                      .+++..+++|.++.+++|+.+.+.+.++ ..+.|+++.+.+++++||++|+.
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~   86 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH
Confidence            4566788999999999999999999888 89999999999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00