Citrus Sinensis ID: 023939

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
MLTQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccEEEEcccccccccccccccccccccccccccccccEEccccc
Coil and Loop (DISEMBL)
mltqmgeewddsIQSKEQVEANLLSKYEATMRRERAMAYSFThqqtwknsskssnpmfmdprnptwgwSWLERWMAarpwesrsatekepnndqssvksanRSIVAGEISKSFARYqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsmvsvqsyrrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekATLASAKkrlayppsparprrhsgppklessinLEISVTNGSS
Flexible Loop (DISEMBL)
mltqmgeewddsiqsKEQVEANLLSKYEATMRRERAMAYSFthqqtwknsskssnpmfmDPRNPTWGWSWLERWMAARPWEsrsatekepnndqssvksanrsIVAGEISKSFAryqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsMVSVQSYRrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekatlasakkrlayppsparprrhsgppklessinleisvtngss
Low Complexity Region (SEG)
MLTQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQspstptksasstvakktkpasPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Disordered region (IsUnstruct)
***************************************************************PTWGWSWLERWMAARP****************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
***Q**EEWDDSIQ****************MRRERAMAY*****************************SWLERWMAARPWE**************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
*************QSKEQVEANLLSKYEATMRRERAMAYSF*************NPMFMDPRNPTWGWSWLERWMAARPW*********************RSIVAGEISKSFARYQLNSDKL*****************************************************************************SAPRYMV*************PLGVDKNGTPEKATLASAKKRLA***************KLESSINLEISVTNGSS
Disordered Region (DISPRO)
ML***GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKN***************TWGWSWLERWMAARPWE********************************************************************************************************************************************************TLAS**KRLAYP******************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLTQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.872	0.528	0.479	2e-47
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.712	0.293	0.301	6e-14

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/269 (47%), Positives = 157/269 (58%), Gaps = 29/269 (10%)

Query: 6   GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPT 65
           G  W+ S QSKEQVEA +L KYEATMRRERA+AY+FTHQQ  K+ SK++NPMFMDP NPT
Sbjct: 198 GGNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQQNLKSFSKTANPMFMDPSNPT 257

Query: 66  WGWSWLERWMAARPWESRSATEKEPNNDQSSVK-SANRSIVAGEISKSFARYQLNSDKLS 124
           WGWSWLERWMA RPWES    +   NND SSVK S NR+   GE +KS  R +LNS    
Sbjct: 258 WGWSWLERWMAGRPWESSEKEQNTTNNDNSSVKNSTNRNSQGGETAKSSNRNKLNSS--- 314

Query: 125 PTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHS 184
                          P+TP  SASST  +  +   P  S            S +  RR S
Sbjct: 315 -------------TKPNTP--SASSTATRNPRKKRPIPSSIKSKSSDDEAKSSERNRRPS 359

Query: 185 IAGSSVRDDESLPTSPSAPR--YMVPTES---AKAKSRLQSPLGVDKNGTPEKATL---A 236
           IA  SV DDE+L +S +A R   ++PT      K KS+  S + V  + T E + L   A
Sbjct: 360 IARPSVSDDETL-SSSTARRSSNLIPTTKSARGKPKSQTSSRVAVTTSTTEESSILPEKA 418

Query: 237 SAKKRLAYPPSPA-RPRRHSGPPKLESSI 264
            AKKRL+   SPA +PRR S PPK+E  +
Sbjct: 419 PAKKRLSTSASPAPKPRRSSAPPKVEKGV 447

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 46/242 (19%)

Query: 7   EEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PT 65
           + WDDS+ +KE+ ++    K +A ++RER+MAY+++ ++ WKNS KS+     D R+ P 
Sbjct: 409 DNWDDSVLTKEERDSRSQRKTDAIIKRERSMAYAYS-RKLWKNSPKSTQ----DNRSFPQ 463

Query: 66  WGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSP 125
           W W+W++R     P  S + +  +P  D     S    +    +S+S  ++ +  D    
Sbjct: 464 W-WNWVDR---QNPLASPAPSYSQPQRDFRLTPS---RLCPSPLSQSSKQHHIRLDNHFD 516

Query: 126 TTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSI 185
           T+  + S++  H +PS P  + +S  +        RG + G D                 
Sbjct: 517 TSTPRSSRSTFH-TPSRPIHTGTSRYS--------RGRLRGQD----------------- 550

Query: 186 AGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYP 245
             S  +DD+SL + P  P YM PT SAKAK R  S       GTP      S K+R++YP
Sbjct: 551 --SPFKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKERVMGTP-----VSEKRRMSYP 603

Query: 246 PS 247
           P+
Sbjct: 604 PT 605

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
255568402	466	calmodulin binding protein, putative [Ri	0.981	0.579	0.715	1e-110
224069348	479	predicted protein [Populus trichocarpa]	0.978	0.561	0.689	1e-101
224140165	472	predicted protein [Populus trichocarpa]	0.978	0.569	0.689	1e-101
225439898	479	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.981	0.563	0.672	4e-97
356545965	470	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.970	0.568	0.666	4e-96
225449126	482	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.941	0.537	0.681	2e-94
147809623	482	hypothetical protein VITISV_018782 [Viti	0.941	0.537	0.674	1e-93
357510601	468	IQ domain-containing protein [Medicago t	0.967	0.568	0.682	2e-93
356537501	474	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.967	0.561	0.652	1e-92
356572413	477	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.96	0.553	0.682	1e-90

>gi|255568402|ref|XP_002525175.1| calmodulin binding protein, putative [Ricinus communis] gi|223535472|gb|EEF37141.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/274 (71%), Positives = 230/274 (83%), Gaps = 4/274 (1%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           +MGEEWDDS+QSKEQ+EANLL+KYEA MRRERA+AYSFTHQQTWKNSS+S+NP+FM   N
Sbjct: 191 RMGEEWDDSLQSKEQIEANLLNKYEAAMRRERALAYSFTHQQTWKNSSRSANPIFMSSSN 250

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           PTWGWSWLERWMAA PWE    TEKE +ND SSVK+A+RS+V GEISKS+ARYQLNSDKL
Sbjct: 251 PTWGWSWLERWMAAHPWEKGGMTEKELSNDHSSVKTASRSMVGGEISKSYARYQLNSDKL 310

Query: 124 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YR 181
           SP  ++K+ +    +SP TP+K  SST+A+K K ASPR S+ G DDD+RS++S+QS  YR
Sbjct: 311 SPAESEKVRQAMSPRSPLTPSKPGSSTIARKLKSASPRSSIGGADDDNRSIISMQSDRYR 370

Query: 182 RHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGT--PEKATLASAK 239
           RHSIAGSSVRDDESL +S + P YMVPTESA+AKSRLQSPLGVDKNGT   EK  L  AK
Sbjct: 371 RHSIAGSSVRDDESLGSSSAVPSYMVPTESARAKSRLQSPLGVDKNGTSEKEKGPLGPAK 430

Query: 240 KRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           KRL+YPPSPARPRR  GP K+ES++N EI+VTNG
Sbjct: 431 KRLSYPPSPARPRRQLGPRKMESNLNAEIAVTNG 464

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069348|ref|XP_002326336.1| predicted protein [Populus trichocarpa] gi|222833529|gb|EEE72006.1| predicted protein [Populus trichocarpa]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/274 (68%), Positives = 224/274 (81%), Gaps = 5/274 (1%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           Q+GEEWDDS+QSKEQ+EANLL+K+EA +RRERA+AYSF+HQQ WK SS++ NPMFM   N
Sbjct: 204 QIGEEWDDSLQSKEQIEANLLNKFEAAVRRERALAYSFSHQQAWKISSRAVNPMFMSG-N 262

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           P+WGWSWLERWMAA PWESRS TEKE NND SS+KSA+RSI  G+ISKS+ARYQLNSDKL
Sbjct: 263 PSWGWSWLERWMAAHPWESRSMTEKELNNDHSSLKSASRSITGGDISKSYARYQLNSDKL 322

Query: 124 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YR 181
           +P  +++ +KT   Q  STP K A+STVA+K K ASPR  + GLDD+S+S+VSVQS   R
Sbjct: 323 TPRESERPTKTANLQFQSTPNKPAASTVARKLKSASPRSGIGGLDDESKSVVSVQSDHSR 382

Query: 182 RHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP--EKATLASAK 239
           RHSIAGS VRDDESL +SP  P YMVPTESA+AKSRLQ+PLG + NG P  EK +L SAK
Sbjct: 383 RHSIAGSFVRDDESLGSSPPLPSYMVPTESARAKSRLQNPLGAEMNGAPEKEKGSLGSAK 442

Query: 240 KRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           KRL+YPPSPA+ RR+SGPPKLESS+  E S   G
Sbjct: 443 KRLSYPPSPAKARRYSGPPKLESSLKAENSEAAG 476

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140165|ref|XP_002323455.1| predicted protein [Populus trichocarpa] gi|222868085|gb|EEF05216.1| predicted protein [Populus trichocarpa]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/274 (68%), Positives = 227/274 (82%), Gaps = 5/274 (1%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           ++GEEWDDS+QSKEQ+EA+LL+K+EA  RRERA+AY+F+HQQT KNSS+S+NPMFM+  N
Sbjct: 197 RIGEEWDDSLQSKEQIEASLLNKFEAATRRERALAYAFSHQQTLKNSSRSANPMFMNG-N 255

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           P+WGWSWLERWMAA PWESRS  EKE NND SSVKSA+RSI  GEISKS+ARYQLNSDKL
Sbjct: 256 PSWGWSWLERWMAAHPWESRSLMEKEHNNDHSSVKSASRSITGGEISKSYARYQLNSDKL 315

Query: 124 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YR 181
           +P  +++ +KT   QSPSTP K A+STVA+K K ASPR ++ G++DDSRSMVSVQS   R
Sbjct: 316 TPRESERPTKTTNLQSPSTPKKPAASTVARKLKSASPRSNIGGIEDDSRSMVSVQSDRSR 375

Query: 182 RHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASA--K 239
           RHSIAGS VRDDESL +SP+ P YMVPT+SA+AKSR+ S LG +K+GTPEK   +S   K
Sbjct: 376 RHSIAGSFVRDDESLGSSPALPSYMVPTQSARAKSRIHSLLGAEKDGTPEKEKGSSGHTK 435

Query: 240 KRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           KRL+YPPSPA+ RR+SGPPKLESS N   SV  G
Sbjct: 436 KRLSYPPSPAKGRRYSGPPKLESSFNARNSVAAG 469

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439898|ref|XP_002279479.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 185/275 (67%), Positives = 222/275 (80%), Gaps = 5/275 (1%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           +MGEEWDDS+QSKEQ+EA LL+K  A MRRERA+AY+F+HQQ WKNSSKS+N +FMDP N
Sbjct: 200 KMGEEWDDSLQSKEQIEAGLLNKQGAAMRRERALAYAFSHQQAWKNSSKSTNLLFMDPSN 259

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           P WGWSWLERWMAARPWESRS T+KE NNDQ S+KS +RSI  GEI+K++AR+ L+S K 
Sbjct: 260 PHWGWSWLERWMAARPWESRSTTDKELNNDQLSIKSGSRSITGGEITKAYARHLLDSSKP 319

Query: 124 SPTTNQKISKTPKHQSPSTP--TKSASSTVAKKTKP-ASPRGSVSGLDDDSRSMVSVQS- 179
           SPT +QK    P  QSPSTP     +SS+ A K KP ASPRG++ G DDD++SMVS+QS 
Sbjct: 320 SPTASQKPYHPPARQSPSTPPSKAVSSSSAAGKFKPAASPRGNLWGQDDDTKSMVSIQSE 379

Query: 180 -YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASA 238
            +RRHSIAGSSV DDESL +SP+ P YM PT+SAKAKSRLQSPLG++ NGTPEK +   A
Sbjct: 380 RFRRHSIAGSSVGDDESLASSPAVPSYMAPTKSAKAKSRLQSPLGLENNGTPEKGSSGIA 439

Query: 239 KKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           KKRL++P SPARPRRHSGPP++ESS   E  V+NG
Sbjct: 440 KKRLSFPASPARPRRHSGPPRVESSSLTEGIVSNG 474

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545965|ref|XP_003541403.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  357 bits (915), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 182/273 (66%), Positives = 216/273 (79%), Gaps = 6/273 (2%)

Query: 3   TQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPR 62
            ++GEEWDDSIQSKEQVEA LLSKYEA MRRERAMAYSF+HQQ WKN+S+S NPMFMDP 
Sbjct: 199 IRLGEEWDDSIQSKEQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKNASRSVNPMFMDPT 258

Query: 63  NPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDK 122
           NP WGWSWLERWMAARPWES S  EKE  ND  S++S++R I + EISKSFA++QLNS+K
Sbjct: 259 NPAWGWSWLERWMAARPWESHSLMEKE-KNDNKSLRSSSRGITSAEISKSFAKFQLNSEK 317

Query: 123 LSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSY-- 180
            SPT +Q    +P  +S S P K +S  VA+K K ASP+  +  +DD ++SMVSVQS   
Sbjct: 318 HSPTASQN-PGSPNFESHSNPPKPSSPAVARKLKKASPK-DILAIDDGTKSMVSVQSERP 375

Query: 181 RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKK 240
           RRHSIAGS V DDESL +SPS P YMVPT+SAKAKSR+QSP   + NGTP+K +  +AKK
Sbjct: 376 RRHSIAGSIVGDDESLASSPSIPSYMVPTKSAKAKSRMQSPFAAE-NGTPDKGSSGTAKK 434

Query: 241 RLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           RL++P SPARPRRHSGPPK+ESS N EI+V NG
Sbjct: 435 RLSFPASPARPRRHSGPPKVESSFNAEITVGNG 467

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449126|ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 180/264 (68%), Positives = 213/264 (80%), Gaps = 5/264 (1%)

Query: 5   MGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNP 64
           MG++WDDS+QSKEQ+EANL SK EA +RRERA+AY+F+HQQTWKNSSK +NP FMDP NP
Sbjct: 208 MGDDWDDSVQSKEQIEANLQSKQEAAVRRERALAYAFSHQQTWKNSSKPANPTFMDPNNP 267

Query: 65  TWGWSWLERWMAARPWESRSATEKEPNNDQSSVKS-ANRSIVAGEISKSFARYQLNSDKL 123
            WGWSWLERWMAARPWESRSA EKE N D +S+KS  +R+   GEISK++AR  LN DK 
Sbjct: 268 HWGWSWLERWMAARPWESRSAMEKELNTDHASLKSTTSRAFSIGEISKAYARRDLNLDKK 327

Query: 124 SPTTNQKISKTPKHQSPSTPTKSA--SSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS-- 179
              T QK S+ P  QSPSTP   A  SS+V  KTKPASP+GS  G DDDSRSM+S+QS  
Sbjct: 328 PSPTAQKPSRPPSRQSPSTPPSKAQSSSSVTGKTKPASPKGSGWGADDDSRSMLSIQSER 387

Query: 180 YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAK 239
           YRRHSIAGS VRDDESL +SP+ P YM  TES +A+SRL SPLG++KNGTPEKA+ +SAK
Sbjct: 388 YRRHSIAGSLVRDDESLASSPAVPSYMASTESTRARSRLPSPLGLEKNGTPEKASGSSAK 447

Query: 240 KRLAYPPSPARPRRHSGPPKLESS 263
           KRL++P SPA PRRHSGPP++E+S
Sbjct: 448 KRLSFPASPAGPRRHSGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147809623|emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]

 Score =  348 bits (893), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 178/264 (67%), Positives = 213/264 (80%), Gaps = 5/264 (1%)

Query: 5   MGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNP 64
           +G++WDDS+QSKEQ+EANL SK EA +RRERA+AY+F+HQQTWKNSSK +NP FMDP NP
Sbjct: 208 IGDDWDDSVQSKEQIEANLQSKQEAAVRRERALAYAFSHQQTWKNSSKPANPTFMDPNNP 267

Query: 65  TWGWSWLERWMAARPWESRSATEKEPNNDQSSVKS-ANRSIVAGEISKSFARYQLNSDKL 123
            WGWSWLERWMAARPWESRSA EKE N D +S+KS  +R+   GEISK++AR  LN DK 
Sbjct: 268 HWGWSWLERWMAARPWESRSAMEKELNTDHASLKSTTSRAFSIGEISKAYARRDLNLDKK 327

Query: 124 SPTTNQKISKTPKHQSPSTPTKSA--SSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS-- 179
              T QK S+ P  QSPSTP   A  SS+V  KT+PASP+GS  G DDDSRSM+S+QS  
Sbjct: 328 PSPTAQKPSRPPSRQSPSTPPSKAQSSSSVTGKTRPASPKGSGWGADDDSRSMLSIQSEW 387

Query: 180 YRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAK 239
           YRRHSIAGS VRDDESL +SP+ P YM  TES +A+SRL SPLG++KNGTPEKA+ +SAK
Sbjct: 388 YRRHSIAGSLVRDDESLASSPAVPSYMASTESTRARSRLPSPLGLEKNGTPEKASGSSAK 447

Query: 240 KRLAYPPSPARPRRHSGPPKLESS 263
           KRL++P SPA PRRHSGPP++E+S
Sbjct: 448 KRLSFPASPAGPRRHSGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510601|ref|XP_003625589.1| IQ domain-containing protein [Medicago truncatula] gi|355500604|gb|AES81807.1| IQ domain-containing protein [Medicago truncatula] gi|388521149|gb|AFK48636.1| unknown [Medicago truncatula]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 187/274 (68%), Positives = 223/274 (81%), Gaps = 8/274 (2%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           ++GEEWDDS+QSKEQ+EA LLSKYEATMRRERA+AY+FTHQQ  KNSS+S NPMF+DP N
Sbjct: 196 RIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNSKNSSRSMNPMFVDPTN 255

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           PTWGWSW+ERWMAARPWESR   +KE  ND SSVKS++RSI+ GEISKSFAR+QLNS+  
Sbjct: 256 PTWGWSWIERWMAARPWESRGLVDKEL-NDHSSVKSSSRSIIGGEISKSFARFQLNSEIH 314

Query: 124 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YR 181
           SP  +Q    +P  QS STPTK AS++VA+K K ASP+GS   +DDDS+SM SVQS  +R
Sbjct: 315 SPVASQN-PGSPSFQSNSTPTKPASASVARKLKKASPKGSWV-MDDDSKSMASVQSDRFR 372

Query: 182 RHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRL--QSPLGVDKNGTPEKATLASAK 239
           RHSIAGSSVRDDESL +SPS P YMVPT+SAKA+ R   QSPL   +NG  EK +  +AK
Sbjct: 373 RHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARLRTQSQSPLA-KENGKQEKGSFGTAK 431

Query: 240 KRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           KRL++P SPARPRRHSGPPK+E++IN E+ V NG
Sbjct: 432 KRLSFPASPARPRRHSGPPKVETAINAELPVPNG 465

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537501|ref|XP_003537265.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 180/276 (65%), Positives = 216/276 (78%), Gaps = 10/276 (3%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           ++GEEWDDS+QSKEQVEA LLSKYEA+MRRERAMAYSF+HQ  WKN+S+S NPMFMDP N
Sbjct: 200 RLGEEWDDSVQSKEQVEAKLLSKYEASMRRERAMAYSFSHQHNWKNASRSINPMFMDPTN 259

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           P WGWSWLERW AARPWES S  EKE N ++ S++S++R I + EISK+FA++QLNS+K 
Sbjct: 260 PAWGWSWLERWTAARPWESHSQMEKEKNGNK-SLRSSSRGITSAEISKAFAKFQLNSEKH 318

Query: 124 SPTTNQKISKTPKH----QSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS 179
           SPT +Q    +P      QS S P K  S  VAKK K ASP+  +  +DDD++SM+SVQS
Sbjct: 319 SPTASQN-PGSPNFESHSQSHSNPPKPPSPAVAKKLKKASPK-DILAIDDDTKSMISVQS 376

Query: 180 Y--RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLAS 237
              RRHSIAGS V DDESL +SPS P YMVPT+SAKAKSR+QSPL  +  GTPEK +  +
Sbjct: 377 ERPRRHSIAGSIVGDDESLASSPSIPSYMVPTKSAKAKSRMQSPLAAE-YGTPEKGSSGT 435

Query: 238 AKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 273
           AKKRL++P SPARPRRHSGPPK+ESS N EI+V NG
Sbjct: 436 AKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNG 471

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572413|ref|XP_003554363.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 187/274 (68%), Positives = 222/274 (81%), Gaps = 10/274 (3%)

Query: 4   QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 63
           +MGEEWDDS+QSKEQ+EA LLSKYEATMRRERA+AY+FTHQQ WKNSS+S NPMFMDP N
Sbjct: 207 RMGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSVNPMFMDPTN 266

Query: 64  PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 123
           P+WGWSWLERWMAARPWESRS  +KE  ND SS++S++RSI  GEISKSFAR+QLNS+K 
Sbjct: 267 PSWGWSWLERWMAARPWESRSHMDKEL-NDHSSIRSSSRSITGGEISKSFARFQLNSEKH 325

Query: 124 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPA-SPRGSVSGLDDDSRSMVSVQS--Y 180
           SPT +Q    +P  Q  STP+K ASS+  K  K + SPRGS   +D+DS+S+VSV S  +
Sbjct: 326 SPTASQN-PGSPSFQ--STPSKPASSSAKKPKKVSPSPRGSWV-MDEDSKSLVSVHSDRF 381

Query: 181 RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKK 240
           RRHSIAGSSVRDDESL +SP+ P YMVPT+SAKAKSR QSPL   +N   EK +  SAKK
Sbjct: 382 RRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLA-SENAKAEKGSFGSAKK 440

Query: 241 RLAYPPSPARPRRHSGPPKLE-SSINLEISVTNG 273
           RL++P SPARPRRHSGPPK+E SS+N E++V  G
Sbjct: 441 RLSFPASPARPRRHSGPPKVESSSLNAELAVDKG 474

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.912	0.544	0.527	6e-64
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.454	0.290	0.496	9.8e-48
TAIR|locus:2066226	527	Iqd4 "AT2G26410" [Arabidopsis	0.887	0.462	0.311	7.1e-25
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.432	0.281	0.389	2.2e-18
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.345	0.361	0.414	4.6e-18
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.432	0.177	0.287	2.3e-17
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.894	0.460	0.259	3.3e-17
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.454	0.241	0.311	1.2e-15
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.294	0.312	0.428	2e-15
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.298	0.197	0.362	2.9e-13

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 144/273 (52%), Positives = 173/273 (63%)

Query:     6 GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPT 65
             G+ W+DSIQSKE+VEANLLSKYEATMRRERA+AYS++HQQ WKN+SKS NPMFMDP NPT
Sbjct:   205 GDNWNDSIQSKEKVEANLLSKYEATMRRERALAYSYSHQQNWKNNSKSGNPMFMDPSNPT 264

Query:    66 WGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSP 125
             WGWSWLERWMA RP ES    +   NND ++  S   SI   E +KS  R    +    P
Sbjct:   265 WGWSWLERWMAGRPLESSEKEQSNSNNDNAA--SVKGSINRNEAAKSLTR----NGSTQP 318

Query:   126 TTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQSYR--RH 183
              T      TP+++                      + S    DDDS+S +SV S R  RH
Sbjct:   319 NTPSSARGTPRNKNSFFSPPTPSRLN---------QSSRKSNDDDSKSTISVLSERNRRH 369

Query:   184 SIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLA 243
             SIAGSSVRDDESL  SP+ P YMVPT+SA+A+ + QSPLG            ASAKKRL+
Sbjct:   370 SIAGSSVRDDESLAGSPALPSYMVPTKSARARLKPQSPLGGTTQENEGFTDKASAKKRLS 429

Query:   244 YPPSPA--RPRRHSGPPKLESSINLEISVTNGS 274
             YP SPA  +PRR S PPK+ES     ++VTNG+
Sbjct:   430 YPTSPALPKPRRFSAPPKVESG---GVTVTNGA 459

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
 Identities = 65/131 (49%), Positives = 88/131 (67%)

Query:     6 GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPT 65
             GE W+DS  S+E+VEAN+L+K  ATMRRE+A+AY+F+HQ TWKNS+K  +  FMDP NP 
Sbjct:   196 GENWNDSTLSREKVEANMLNKQVATMRREKALAYAFSHQNTWKNSTKMGSQTFMDPNNPH 255

Query:    66 WGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSP 125
             WGWSWLERWMAARP E+ S T   P+N +    S+ RS+ +  +S+   R + N      
Sbjct:   256 WGWSWLERWMAARPNENHSLT---PDNAEKD--SSARSVASRAMSEMIPRGK-NLSPRGK 309

Query:   126 TTNQKISKTPK 136
             T N +   +P+
Sbjct:   310 TPNSRRGSSPR 320

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2066226 Iqd4 "AT2G26410" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 7.1e-25, P = 7.1e-25
 Identities = 84/270 (31%), Positives = 132/270 (48%)

Query:     9 WDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGW 68
             +D S +SKEQ+ A  +++ EA++RRERA+AY+++HQQTW+NSSK  +   MD     WGW
Sbjct:   243 FDSSNKSKEQIVARSVNRKEASVRRERALAYAYSHQQTWRNSSKLPHQTLMDTNTTDWGW 302

Query:    69 SWLERWMAARPWESRSATE----KEPNNDQSSVKSAN-RSIVAGEISKSFARYQLNSDKL 123
             SWLERWMA+RPW++ S  +    K     ++S+KS+  RS      S+S  ++ +N+D  
Sbjct:   303 SWLERWMASRPWDAESIDDQVSVKSSLKRENSIKSSPARSKTQKSASQSSIQWPVNND-- 360

Query:   124 SPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQSYRRH 183
               T ++KI  T +                        R S+       +S VSV++    
Sbjct:   361 --TKSRKIEVTNRRHSIGGGSSENAKDDESVGSSSSRRNSLDNTQT-VKSKVSVETTSNV 417

Query:   184 SIAGS-----SVRDDESLP-TSPSAPRYMVPTESAKAKSR-LQSPLGVDKNGTPEKATLA 236
             S A +     +V    +L  T     +  V T    A +  ++S + V     P+K  +A
Sbjct:   418 SNAQTVKPKANVGAKRNLDNTKTLKSKSSVGTTGNLANTEAVKSKVNVGTTSMPKKEVVA 477

Query:   237 SAKKRLAYPPSPARPRRHSGPPKLESSINL 266
               KK    PP    P++     +L SS +L
Sbjct:   478 DKKK----PPQMVLPKK-----RLSSSTSL 498

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 51/131 (38%), Positives = 75/131 (57%)

Query:     4 QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSK--SSNPMFMDP 61
             ++ E W DSI S EQ++A LL + EA  +RERAMAY+ THQ  W+  ++  S++  F   
Sbjct:   178 EIEEGWCDSIGSVEQIQAKLLKRQEAAAKRERAMAYALTHQ--WQAGTRLLSAHSGFQPD 235

Query:    62 RNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSD 121
             +N  WGW+WLERWMA RPWE+R       +N +   K     +   E S++  + Q+ S 
Sbjct:   236 KN-NWGWNWLERWMAVRPWENRFLD----SNLRDDAKLGENGM---EQSENVPKTQIKSV 287

Query:   122 KLSPTTNQKIS 132
                P T+  +S
Sbjct:   288 SKMPNTSNLVS 298

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 41/99 (41%), Positives = 64/99 (64%)

Query:     8 EWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWG 67
             EW+   ++K+++   +L + EAT++RERA+AY+F+HQ  WK   K+      +  N  WG
Sbjct:   139 EWNGGSETKDEILERILQREEATIKRERALAYAFSHQ--WKADGKTQWLGSYELGNTNWG 196

Query:    68 WSWLERWMAARPWESR-SATEKEPNNDQSSVKS-ANRSI 104
             WSW ERW++ARPWE R S T K+P + ++   S A R++
Sbjct:   197 WSWKERWISARPWEVRYSVTPKKPKSSKTDSNSPAKRTV 235

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
 Identities = 38/132 (28%), Positives = 71/132 (53%)

Query:     7 EEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PT 65
             + WDDS+ +KE+ ++    K +A ++RER+MAY+++ ++ WKNS KS+     D R+ P 
Sbjct:   410 DNWDDSVLTKEERDSRSQRKTDAIIKRERSMAYAYS-RKLWKNSPKSTQ----DNRSFPQ 464

Query:    66 WGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSP 125
             W W+W++R     P  S + +  +P  D     S    +    +S+S  ++ +  D    
Sbjct:   465 W-WNWVDR---QNPLASPAPSYSQPQRDFRLTPSR---LCPSPLSQSSKQHHIRLDNHFD 517

Query:   126 TTNQKISKTPKH 137
             T+  + S++  H
Sbjct:   518 TSTPRSSRSTFH 529

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 67/258 (25%), Positives = 118/258 (45%)

Query:     3 TQMGEEWDDSIQSKEQVEANLLSKYEATMRRE--RAMAYSFTHQQTWKNSSKSSNPMFMD 60
             + + E+WDD   + E+V+A L  + +  +RRE   +++ +F+HQ      S S+   + +
Sbjct:   233 SSIAEDWDDRPHTIEEVKAMLQQRRDNALRRESNNSISQAFSHQVRRTRGSYSTGDEYEE 292

Query:    61 PRNPTWGWSWLERWMAARPWESRSATEKE--PNNDQSSVKSANRSIVAGEISKSFARYQL 118
              R P     WL+RWMA++PW+ R++T++   P      + ++   +  G  S++ A    
Sbjct:   293 ER-P----KWLDRWMASKPWDKRASTDQRVPPVYKTVEIDTSQPYLTRGN-SRTGASPSR 346

Query:   119 NSDKLSPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQ 178
             +    SP+      +                           R   S  +  S +     
Sbjct:   347 SQRPSSPSRTSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTSNTPSLRS 406

Query:   179 SYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASA 238
             +Y   + +G SV    +  T+ + P YM  TESAKA+ R QS     +  TPEK  ++SA
Sbjct:   407 NYSFTARSGYSVCTTTTTATNAALPNYMAITESAKARIRSQSAPR-QRPSTPEKERISSA 465

Query:   239 KKRLAYPPSPARPRRHSG 256
             +KRL++P  P  P++  G
Sbjct:   466 RKRLSFPVPPL-PQQMDG 482

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 42/135 (31%), Positives = 74/135 (54%)

Query:     3 TQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPR 62
             ++M ++WDDS+ +KE+ +  L  K +A ++RER+MAY+++HQ  WKNS KS+  +     
Sbjct:   251 SRMSDDWDDSVLTKEEKDVRLHRKIDAMIKRERSMAYAYSHQ-LWKNSPKSAQDI-RTSG 308

Query:    63 NPTWGWSWLERWMAA-RPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSD 121
              P W W+W++R     +P+     T   P+      +S+N++     ++ SF     NS 
Sbjct:   309 FPLW-WNWVDRQKNQNQPFR---LTPTRPSLSPQP-QSSNQNHF--RLNNSFDTSTPNSS 361

Query:   122 KLSPTTNQKISKTPK 136
             K +  T  +   TP+
Sbjct:   362 KSTFVTPSRPIHTPQ 376

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 36/84 (42%), Positives = 55/84 (65%)

Query:     2 LTQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWK-NSSKSSNPMFMD 60
             L ++  EW    ++ E++ A +  K EAT++RERAMAY+F+HQ  W+ N+++       +
Sbjct:   136 LHELEVEWCGGSETMEEILAKIQQKEEATVKRERAMAYAFSHQ--WRANATQYLGQASFN 193

Query:    61 PRNPTWGWSWLERWMAARPWESRS 84
                 +WGWSW ERW+AARPWE R+
Sbjct:   194 LGKESWGWSWKERWIAARPWEIRA 217

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query:     1 MLTQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKS-----SN 55
             +L ++ E W D   + + +++ L  + E   +RERA+AY+   +Q W++++ S     S+
Sbjct:   169 LLKEVEEGWCDRKGTVDDIKSKLQQRQEGAFKRERALAYALAQKQ-WRSTTSSNLKTNSS 227

Query:    56 PMFMDPRN---PTWGWSWLERWMAARPWESR 83
               ++  +     +WGWSWLERWMAARPWE+R
Sbjct:   228 ISYLKSQEFDKNSWGWSWLERWMAARPWETR 258

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00280137 hypothetical protein (480 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	275
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	2e-06

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 171 SRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP 230
             S  S  S    S    S RDD S  +SPS P YM  TESAKAK R QS     +  T 
Sbjct: 6   LSSSSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAP-RQRPETE 64

Query: 231 EKATLASAKKRLAYPPSPARPRRHSG 256
           E+ + +SA KRL+ P S +     S 
Sbjct: 65  ERESGSSATKRLSLPVSSSSGGSSSS 90

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.49

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.49  E-value=4.3e-14  Score=114.07  Aligned_cols=57  Identities=47%  Similarity=0.611  Sum_probs=47.1

Q ss_pred             CCCCcccccccccccccCCCCCCCCCCCCccccccccccccccCCCCCCCCccCCCCC
Q 023939          202 APRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPK  259 (275)
Q Consensus       202 ~p~yM~~T~Sakak~RsqS~p~~~r~~~~e~~~~~~~kkRlS~~~s~~~~rr~S~~pk  259 (275)
                      +|+||++|||||||+|+||+|+| |+++.|.+....++||+|||...+.....+..+.
T Consensus        34 ~PsYMa~TeSakAK~RsqSaPrq-R~~~~~~~~~~~~~kR~S~~~~~~~~~~~~~~~~   90 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQSAPRQ-RPGTPERAEKQSSKKRLSLPGSSNSGSSSSRSPR   90 (102)
T ss_pred             CCCccchhhhhhhhhhccCCccc-CCCccccccccccccccccCCCCCCCcCCCCCCc
Confidence            89999999999999999999998 8888776655778999999987764555554443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00