Citrus Sinensis ID: 024109


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
cccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccc
ccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccc
mrapkrpihavstwvrrqppkVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEktcaglslkSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLrssymedkdnfAIYYVVVPCAVLALlihpstshniLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
mrapkrpihavstwvrrqppKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHtlldlatlattlWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
*********AVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRL*****
****************RQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSG**
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
*****RPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGV*
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query272 2.2.26 [Sep-21-2011]
Q09473213 Putative ER lumen protein yes no 0.757 0.967 0.343 7e-26
O44017215 ER lumen protein retainin N/A no 0.761 0.962 0.324 2e-25
Q86JE5218 ER lumen protein retainin yes no 0.757 0.944 0.315 3e-25
P48583213 ER lumen protein retainin no no 0.724 0.924 0.333 4e-25
Q611C8213 ER lumen protein retainin N/A no 0.724 0.924 0.319 4e-25
O76767212 ER lumen protein retainin yes no 0.757 0.971 0.337 7e-25
P35402215 ER lumen protein retainin no no 0.764 0.967 0.340 4e-24
Q5XHA2212 ER lumen protein retainin yes no 0.738 0.948 0.324 9e-24
Q6PAB8212 ER lumen protein retainin N/A no 0.738 0.948 0.315 1e-23
O94270212 ER lumen protein retainin yes no 0.746 0.957 0.331 2e-23
>sp|Q09473|ERD22_CAEEL Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1 Back     alignment and function desciption
 Score =  117 bits (294), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 129/227 (56%), Gaps = 21/227 (9%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+ 
Sbjct: 2   NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  LA T   +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+   
Sbjct: 61  -TTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAP 115

Query: 163 -RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRG 221
             + W F +YLEAV++LPQL ++Q+T   E  TAHY+FALG  R L   +W+ +      
Sbjct: 116 FELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTE-- 173

Query: 222 HLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLP 268
                     +  +V+++ IVQT + ADF Y YV  V   +  + LP
Sbjct: 174 --------DYFDPIVVVAGIVQTVLYADFFYLYVTRVVQTRKGMELP 212




Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.
Caenorhabditis elegans (taxid: 6239)
>sp|O44017|ERD2_ENTHI ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1 Back     alignment and function description
>sp|Q86JE5|ERD2_DICDI ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1 Back     alignment and function description
>sp|P48583|ERD2_CAEEL ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=3 SV=2 Back     alignment and function description
>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1 Back     alignment and function description
>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1 Back     alignment and function description
>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|Q6PAB8|ER21A_XENLA ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-a PE=2 SV=1 Back     alignment and function description
>sp|O94270|ERD2_SCHPO ER lumen protein retaining receptor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erd2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query272
255576737272 ER lumen protein retaining receptor, put 1.0 1.0 0.966 1e-152
224103251272 predicted protein [Populus trichocarpa] 1.0 1.0 0.937 1e-149
224080568272 predicted protein [Populus trichocarpa] 1.0 1.0 0.933 1e-147
388500700272 unknown [Medicago truncatula] 1.0 1.0 0.933 1e-147
356508031272 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.933 1e-147
356544080272 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.933 1e-146
356516732272 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.922 1e-146
356538534272 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.926 1e-145
225427894272 PREDICTED: ER lumen protein retaining re 1.0 1.0 0.922 1e-144
255645423272 unknown [Glycine max] 1.0 1.0 0.911 1e-144
>gi|255576737|ref|XP_002529256.1| ER lumen protein retaining receptor, putative [Ricinus communis] gi|223531292|gb|EEF33134.1| ER lumen protein retaining receptor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/272 (96%), Positives = 269/272 (98%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MRAPKRPIHAVSTWVRRQPPKVKAFLAVV+GMAALV LRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVAGMAALVFLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  IVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDLATLGTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRFNL+SSYMEDKDNFAIYYVVVPCA+LALLIHPSTSHNI+NRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFAIYYVVVPCAILALLIHPSTSHNIVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD+RGHLLVALGYGLWPSMVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103251|ref|XP_002312984.1| predicted protein [Populus trichocarpa] gi|222849392|gb|EEE86939.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224080568|ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|222849129|gb|EEE86676.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388500700|gb|AFK38416.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356508031|ref|XP_003522766.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max] Back     alignment and taxonomy information
>gi|356544080|ref|XP_003540483.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max] Back     alignment and taxonomy information
>gi|356516732|ref|XP_003527047.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max] Back     alignment and taxonomy information
>gi|356538534|ref|XP_003537758.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max] Back     alignment and taxonomy information
>gi|225427894|ref|XP_002273333.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera] Back     alignment and taxonomy information
>gi|255645423|gb|ACU23207.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query272
TAIR|locus:2047052269 AT2G21190 "AT2G21190" [Arabido 0.985 0.996 0.869 2.4e-124
TAIR|locus:2141796273 AT4G38790 "AT4G38790" [Arabido 1.0 0.996 0.857 5.7e-123
TAIR|locus:2005619272 AT1G75760 "AT1G75760" [Arabido 1.0 1.0 0.819 8.5e-120
TAIR|locus:2198601272 AT1G19970 "AT1G19970" [Arabido 1.0 1.0 0.779 7.1e-116
TAIR|locus:2090255272 AT3G25160 "AT3G25160" [Arabido 0.959 0.959 0.587 3.9e-83
WB|WBGene00016195213 C28H8.4 [Caenorhabditis elegan 0.764 0.976 0.328 5e-28
DICTYBASE|DDB_G0272124218 kdelr "ER lumen protein retain 0.757 0.944 0.315 8.4e-26
FB|FBgn0022268212 KdelR "KDEL receptor" [Drosoph 0.757 0.971 0.324 2.2e-25
TAIR|locus:2013683215 ERD2 "AT1G29330" [Arabidopsis 0.764 0.967 0.344 2.9e-25
WB|WBGene00001331213 erd-2 [Caenorhabditis elegans 0.727 0.929 0.320 2.9e-25
TAIR|locus:2047052 AT2G21190 "AT2G21190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1222 (435.2 bits), Expect = 2.4e-124, P = 2.4e-124
 Identities = 233/268 (86%), Positives = 245/268 (91%)

Query:     5 KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 64
             K PIHAVSTWVRRQPPKVKAFLAVVSGMAALVLL+ IVHDHDNLFVAAEAVHSIGISVLI
Sbjct:     2 KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLKLIVHDHDNLFVAAEAVHSIGISVLI 61

Query:    65 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN 124
             YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH            WVIYMIRFN
Sbjct:    62 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFN 121

Query:   125 LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVM 184
             L+++YME+KDNFA+YYV+ PC VLA+ IHPSTSHNILNRI W FCVYLEAVSVLPQLRVM
Sbjct:   122 LKTTYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query:   185 QNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQT 244
             QNTKIVEPFTAHYVFALGVARF SCAHWVLQ++D+ G LLV LGYGLWPSMV+ISEIVQT
Sbjct:   182 QNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLVVLGYGLWPSMVIISEIVQT 241

Query:   245 FILADFCYYYVKSVFGGQLVLRLPSGVV 272
             FILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct:   242 FILADFCYYYVKSVFGGQLVLRLPSGVV 269




GO:0004872 "receptor activity" evidence=ISS
GO:0006621 "protein retention in ER lumen" evidence=IEA
GO:0015031 "protein transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA;ISS
GO:0046923 "ER retention sequence binding" evidence=IEA
TAIR|locus:2141796 AT4G38790 "AT4G38790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005619 AT1G75760 "AT1G75760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198601 AT1G19970 "AT1G19970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090255 AT3G25160 "AT3G25160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0272124 kdelr "ER lumen protein retaining receptor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query272
pfam00810143 pfam00810, ER_lumen_recept, ER lumen protein retai 1e-48
COG5196214 COG5196, ERD2, ER lumen protein retaining receptor 7e-30
>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor Back     alignment and domain information
 Score =  157 bits (399), Expect = 1e-48
 Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 72  TCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-TLLDLATLATTLWVIYMIRFNLRSSYM 130
           +C+GLSLK+Q L AI    R    F     ++ T++ +  + ++++ IY+++F  +++Y 
Sbjct: 1   SCSGLSLKTQILYAIVFLTRYLDLFEGYISLYNTIMKILFIVSSVYTIYLMKFKYKATYD 60

Query: 131 EDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIV 190
            D D F I Y++VPC VLAL+ H          I W F +YLE+V++LPQL ++Q T  V
Sbjct: 61  RDIDTFKIEYLIVPCLVLALIFH---HSYSFLEILWTFSIYLESVAILPQLFMLQKTGEV 117

Query: 191 EPFTAHYVFALGVARFLSCAHWVLQV 216
           E  T+HY+FALG+ R L   +W+ + 
Sbjct: 118 ENLTSHYLFALGLYRALYILNWIYRY 143


Length = 143

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 272
KOG3106212 consensus ER lumen protein retaining receptor [Int 100.0
COG5196214 ERD2 ER lumen protein retaining receptor [Intracel 100.0
PF00810147 ER_lumen_recept: ER lumen protein retaining recept 100.0
TIGR00951220 2A43 Lysosomal Cystine Transporter. 96.18
KOG3211230 consensus Predicted endoplasmic reticulum membrane 95.84
PF0419361 PQ-loop: PQ loop repeat 93.47
PF0419361 PQ-loop: PQ loop repeat 92.22
smart0067932 CTNS Repeated motif present between transmembrane 84.2
>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=100.00  E-value=8.8e-84  Score=560.94  Aligned_cols=211  Identities=45%  Similarity=0.791  Sum_probs=203.9

Q ss_pred             ChhHHHHhhHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHhhhhccee-eehhHHHHHHHHHHHHHHHHHHHhhc
Q 024109           45 HDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFV-MEYDIHTLLDLATLATTLWVIYMIRF  123 (272)
Q Consensus        45 ~~~~~llgdl~hl~s~~iLl~KI~~~KS~~GiSlkTQ~Ly~lVf~~Rl~~~~~-~~y~~~~~~k~~~l~~s~~iiyli~~  123 (272)
                      +|.||++||++|++|+++|++||+|+|||+|||+|||+|||+||++||+|.|. .++++|++||++++++|.+++|+|++
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999886 56778999999999999999999999


Q ss_pred             ccccccccccccchhhhhHHHHHHHHHHhCCCCCcchhhhHHHHHHHHHHHhhhhhHHHHHHhcCCccchhHHHHHHHHH
Q 024109          124 NLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGV  203 (272)
Q Consensus       124 kyk~Tyd~~~Dtf~~~~liiP~~vLali~~~~~~~~~~~eilWtFSiyLEsVAILPQL~mlqktg~ve~lTshYv~~LG~  203 (272)
                      |+|+|||+|+|||+++|+++||+++|+++||+.   .+.|++||||+|||||||||||+|+||+||+|++|+||+||||+
T Consensus        81 k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~---t~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~  157 (212)
T KOG3106|consen   81 KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSF---TILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGL  157 (212)
T ss_pred             HHHHHHhcccCceeEEEEehhheeeeeeecCCc---cHHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHH
Confidence            999999999999999999999999999999984   48999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccccchhhccCCCcchHHHHHHHHHHHHHhhhhhhhhhhhcCCceeeecCC
Q 024109          204 ARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS  269 (272)
Q Consensus       204 yR~lyl~nWi~ry~~~~~~~~~~~g~g~~~~~~ii~givQt~ly~DFfy~Y~~~v~~G~~~~~LP~  269 (272)
                      ||++|++|||+|+.+|+          +||++++++|+|||++|+||||+|++++++|++ ++||+
T Consensus       158 yR~ly~~~WI~r~~~e~----------~~~~iai~agiVQT~ly~DFfy~Y~~~v~~g~~-~~LP~  212 (212)
T KOG3106|consen  158 YRALYIANWIYRYVTED----------FWDPIAIVAGIVQTVLYADFFYLYVTKVLQGKK-LKLPA  212 (212)
T ss_pred             HHHHHHHHHHHHHHhhc----------cccchHHHHHHHHHHHHHhHHHHHHHHHHcCCc-CCCCC
Confidence            99999999999998873          799999999999999999999999999999999 99995



>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00