Citrus Sinensis ID: 024113

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEcccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccccHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHcccccccccccccccccccccHHHHccHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccccccccccccEEEEEEcccccccccccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccccccccEEEEEccccccEEEHccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
matlgdigVAATINILSAFAFLSAFAILRiqpindrvyfpkwylkglrssplqtgtlvSKFVNLDFRSYLRFLSwmpaalqmpepelidhagldSAVYLRIYLIGLKIFIPIACLGFAVMvpvnwtnktlehsklkysnidllsisnvplgsnrmsSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLasehrrpdqftsFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Flexible Loop (DISEMBL)
MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGlrssplqtgTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Low Complexity Region (SEG)
MATLGDIGVAATINilsafaflsafailRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Disordered region (IsUnstruct)
***LGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVL**
Disordered Region (DISOPRED)
*ATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLK********************FRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLS*
Disordered Region (DISEMBL)
MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Disordered Region (DISPRO)
*ATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLR**********SKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTTREVCSFSFSFLQHIVRFRNANKLLILFQVLSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
356501300	760	PREDICTED: uncharacterized membrane prot	0.731	0.261	0.771	5e-95
164605531	755	CM0545.360.nc [Lotus japonicus]	0.731	0.263	0.748	3e-93
357493417	766	Transmembrane protein [Medicago truncatu	0.731	0.259	0.730	1e-90
449468470	768	PREDICTED: uncharacterized protein RSN1-	0.882	0.312	0.616	2e-90
449490363	768	PREDICTED: uncharacterized protein RSN1-	0.882	0.312	0.613	6e-90
224131634	768	predicted protein [Populus trichocarpa]	0.863	0.305	0.639	1e-89
255576911	726	conserved hypothetical protein [Ricinus	0.863	0.323	0.646	1e-86
62319233	756	hypothetical protein [Arabidopsis thalia	0.731	0.263	0.696	9e-86
224064953	763	predicted protein [Populus trichocarpa]	0.731	0.260	0.730	3e-85
225447093	767	PREDICTED: uncharacterized membrane prot	0.878	0.311	0.649	3e-84

>gi|356501300|ref|XP_003519463.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Glycine max]

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 172/223 (77%), Positives = 182/223 (81%), Gaps = 24/223 (10%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MA+LGDIG+AA INILSAFAFL AFAILRIQPINDRVYFPKWYLKGLRSSPLQ G  VSK
Sbjct: 3   MASLGDIGLAAAINILSAFAFLLAFAILRIQPINDRVYFPKWYLKGLRSSPLQAGIFVSK 62

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVNLDF+SY+RFLSWMPAALQMPEPELIDHAGLDSAVYLRIYL+GLKIF+PIA L F+VM
Sbjct: 63  FVNLDFKSYIRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLLGLKIFVPIAVLAFSVM 122

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLE S L YS ID LSISN+P GSN                        RFW
Sbjct: 123 VPVNWTNSTLERSNLTYSQIDKLSISNIPTGSN------------------------RFW 158

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFT 223
           THLVMAY FTFWTCY+LKREY+IVA MRLHFLASE RRPDQFT
Sbjct: 159 THLVMAYAFTFWTCYILKREYQIVATMRLHFLASERRRPDQFT 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164605531|dbj|BAF98597.1| CM0545.360.nc [Lotus japonicus]

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/223 (74%), Positives = 183/223 (82%), Gaps = 24/223 (10%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MA+LGDIG+AA INIL+AFAFL AFA+LRIQPINDRVYFPKWYLKGLRSSPLQ G  VSK
Sbjct: 1   MASLGDIGLAAAINILTAFAFLIAFAVLRIQPINDRVYFPKWYLKGLRSSPLQGGAFVSK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVNLDFRSY+RFL+WMPAALQMPEPELIDHAGLDSAVYLRIYL+GLKIF+PI+ L F+VM
Sbjct: 61  FVNLDFRSYIRFLNWMPAALQMPEPELIDHAGLDSAVYLRIYLLGLKIFVPISLLAFSVM 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLE S ++YSNID LSISN+P GSN                        RFW
Sbjct: 121 VPVNWTNNTLERSNVEYSNIDKLSISNIPTGSN------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFT 223
           THL MAY+FTFWTCY+LKREY+IVA MRL FLASE RRPDQFT
Sbjct: 157 THLAMAYLFTFWTCYILKREYQIVATMRLSFLASERRRPDQFT 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493417|ref|XP_003616997.1| Transmembrane protein [Medicago truncatula] gi|355518332|gb|AES99955.1| Transmembrane protein [Medicago truncatula]

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/223 (73%), Positives = 182/223 (81%), Gaps = 24/223 (10%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MA+LGDIG+AA INIL+A  FL AFAILRIQPINDRVYFPKWY+KGLRSSPLQ G  VSK
Sbjct: 1   MASLGDIGLAAAINILTAIVFLLAFAILRIQPINDRVYFPKWYMKGLRSSPLQGGAFVSK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVN+DFRSY+RFL+WMPAALQMPEPELI+HAGLDSAVYLRIYL+GLKIF+PI+ L F+VM
Sbjct: 61  FVNIDFRSYIRFLNWMPAALQMPEPELIEHAGLDSAVYLRIYLLGLKIFVPISLLAFSVM 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TL+ S + Y++ID LSISN+PLGSN                        RFW
Sbjct: 121 VPVNWTNDTLKRSNVVYTSIDKLSISNIPLGSN------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFT 223
           THLVMAY FTFWTCY+LKREY+IVAAMRL FLASE RRPDQFT
Sbjct: 157 THLVMAYAFTFWTCYILKREYQIVAAMRLSFLASERRRPDQFT 199

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468470|ref|XP_004151944.1| PREDICTED: uncharacterized protein RSN1-like [Cucumis sativus]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 169/274 (61%), Positives = 201/274 (73%), Gaps = 34/274 (12%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MA++GDIGV A INILSAFAF   FA+LRIQP+NDRVYFPKWY+KGLR SP+ +G LV +
Sbjct: 1   MASIGDIGVGAAINILSAFAFFLVFALLRIQPVNDRVYFPKWYIKGLRGSPMSSGALVGR 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
            VNLDFRSYL+FL+WM AAL+MPEPELIDHAGLDSAVYLRIYL+GLKIF+PIACL F +M
Sbjct: 61  IVNLDFRSYLKFLNWMVAALRMPEPELIDHAGLDSAVYLRIYLLGLKIFVPIACLAFTIM 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLE S L YSNID LSISN+P+GS+                        RFW
Sbjct: 121 VPVNWTNGTLERSSLNYSNIDKLSISNIPIGSS------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTT 240
           THLVMAYVFTFWTCY+L++EYEIVA+MRLHFLASE+RRPDQ+T    I+ N     + + 
Sbjct: 157 THLVMAYVFTFWTCYILRKEYEIVASMRLHFLASENRRPDQYT---VIVRNVPPDPDESV 213

Query: 241 REVCSFSF------SFLQHIVRFRNANKLLILFQ 268
            E+    F       +L H + + +ANKL  L +
Sbjct: 214 SELVEHFFLVNHPDHYLTHQIVY-DANKLSKLVE 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490363|ref|XP_004158583.1| PREDICTED: uncharacterized protein RSN1-like [Cucumis sativus]

 Score =  336 bits (862), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 168/274 (61%), Positives = 201/274 (73%), Gaps = 34/274 (12%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MA++GDIGV A INILSAFAF   FA+LRIQP+NDRVYFPKWY+KGLR SP+ +G LV +
Sbjct: 1   MASIGDIGVGAAINILSAFAFFLVFALLRIQPVNDRVYFPKWYIKGLRGSPMSSGALVGR 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
            VNLDFRSYL+FL+WM AAL+MPEPELIDHAGLDSAVYLRIYL+GLKIF+PIACL F +M
Sbjct: 61  IVNLDFRSYLKFLNWMVAALRMPEPELIDHAGLDSAVYLRIYLLGLKIFVPIACLAFTIM 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLE S L YSNID LSIS++P+GS+                        RFW
Sbjct: 121 VPVNWTNGTLERSSLNYSNIDKLSISDIPIGSS------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTT 240
           THLVMAYVFTFWTCY+L++EYEIVA+MRLHFLASE+RRPDQ+T    I+ N     + + 
Sbjct: 157 THLVMAYVFTFWTCYILRKEYEIVASMRLHFLASENRRPDQYT---VIVRNVPPDPDESV 213

Query: 241 REVCSFSF------SFLQHIVRFRNANKLLILFQ 268
            E+    F       +L H + + +ANKL  L +
Sbjct: 214 SELVEHFFLVNHPDHYLTHQIVY-DANKLSKLVE 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131634|ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1| predicted protein [Populus trichocarpa]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 172/269 (63%), Positives = 192/269 (71%), Gaps = 34/269 (12%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MAT+ DIGVAA INIL+AFAF   FAILRIQP+NDRVYFPKWY+KGLRSSPL TG  V K
Sbjct: 1   MATISDIGVAAAINILTAFAFFIVFAILRIQPVNDRVYFPKWYIKGLRSSPLGTGAFVGK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVNLDFRSY+RFL+WMPAALQMPEPELIDHAGLDSAVYLRIYL GLKIF+PIA L F + 
Sbjct: 61  FVNLDFRSYVRFLNWMPAALQMPEPELIDHAGLDSAVYLRIYLTGLKIFVPIAFLAFTIS 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLEHS L YS++D LSISN+P GS                         RFW
Sbjct: 121 VPVNWTNNTLEHSTLTYSDLDKLSISNIPTGSC------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTT 240
           TH+VMAY FTFWTCYVLK EYE VA MRLHFLASE RRPDQFT    ++ N     + + 
Sbjct: 157 THMVMAYAFTFWTCYVLKTEYETVAKMRLHFLASEKRRPDQFT---VLVRNVPPDPDESV 213

Query: 241 REVCSFSF------SFLQHIVRFRNANKL 263
            E+    F       +L H V + NAN+L
Sbjct: 214 SELVEHFFLVNHPSDYLTHQVVY-NANEL 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576911|ref|XP_002529341.1| conserved hypothetical protein [Ricinus communis] gi|223531212|gb|EEF33058.1| conserved hypothetical protein [Ricinus communis]

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 174/269 (64%), Positives = 197/269 (73%), Gaps = 34/269 (12%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MATL DI VAA INIL AFAF  AFAILRIQP+NDRVYFPKWY+KGLRSSP++TGT   K
Sbjct: 1   MATLSDIAVAAAINILGAFAFFLAFAILRIQPVNDRVYFPKWYIKGLRSSPIRTGTFGGK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
            VNLDFRSYLRFL+WMPAALQMPEPELIDHAGLDSAVYLRIYL GLKIF+PIA + F V+
Sbjct: 61  LVNLDFRSYLRFLNWMPAALQMPEPELIDHAGLDSAVYLRIYLTGLKIFVPIAFVAFTVL 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TL+ S L YS++D LSISN+P+GS+                        RFW
Sbjct: 121 VPVNWTNSTLKRSNLTYSDLDKLSISNIPMGSS------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTT 240
           THLVMAY F+FWTCYVLK+EYEIVA+MRLHFLASEHRRPDQFT    ++ N     + + 
Sbjct: 157 THLVMAYAFSFWTCYVLKKEYEIVASMRLHFLASEHRRPDQFT---VLVRNVPPDPDESV 213

Query: 241 REVCSFSF------SFLQHIVRFRNANKL 263
            E+    F       FL H V + NANKL
Sbjct: 214 NELVEHFFLVNHPDHFLTHQVVY-NANKL 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62319233|dbj|BAD94445.1| hypothetical protein [Arabidopsis thaliana]

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 156/224 (69%), Positives = 176/224 (78%), Gaps = 25/224 (11%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MATL DIGVAATINIL+ FAF  AFAILR+QP+NDRVYFPKWYLKGLRSSP++TG   SK
Sbjct: 1   MATLTDIGVAATINILTVFAFFIAFAILRLQPVNDRVYFPKWYLKGLRSSPIKTGGFASK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVNLDFRSY+RFL+WMP AL+MPEPELIDHAGLDS VYLRIYL+GLKIF PIAC+ F VM
Sbjct: 61  FVNLDFRSYIRFLNWMPQALRMPEPELIDHAGLDSVVYLRIYLLGLKIFFPIACIAFTVM 120

Query: 121 VPVNWTNKTLEHSK-LKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRF 179
           VPVNWTN TL+  K L +S+ID LSISN+P GS+                        RF
Sbjct: 121 VPVNWTNSTLDQLKNLTFSDIDKLSISNIPTGSS------------------------RF 156

Query: 180 WTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFT 223
           W HL MAYV TFWTC+VL+REY+ +A+MRL FLASEHRRPDQFT
Sbjct: 157 WVHLCMAYVITFWTCFVLQREYKHIASMRLQFLASEHRRPDQFT 200

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064953|ref|XP_002301612.1| predicted protein [Populus trichocarpa] gi|222843338|gb|EEE80885.1| predicted protein [Populus trichocarpa]

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 163/223 (73%), Positives = 175/223 (78%), Gaps = 24/223 (10%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MATL DIGVAA INIL+AFAF  AFAILRIQP+NDRVYFPKWY+KGLRSSP  TG  V K
Sbjct: 1   MATLSDIGVAAAINILTAFAFFFAFAILRIQPVNDRVYFPKWYIKGLRSSPFGTGAFVGK 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
            VNLDFRSY+RFL+WMPAAL MPEPELIDHAGLDSAVYLRIYLIGLKIF+PIA L F ++
Sbjct: 61  VVNLDFRSYVRFLNWMPAALHMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIAFLAFTIL 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNWTN TLE S L YS++D LSISN+P GSN                        RFW
Sbjct: 121 VPVNWTNSTLERSNLTYSDLDKLSISNIPTGSN------------------------RFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFT 223
           THLVMAY  TFWTCYVLK+EYEIVA MRLHFLASE RRPDQFT
Sbjct: 157 THLVMAYASTFWTCYVLKKEYEIVAKMRLHFLASEKRRPDQFT 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447093|ref|XP_002270698.1| PREDICTED: uncharacterized membrane protein C2G11.09-like [Vitis vinifera]

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 176/271 (64%), Positives = 195/271 (71%), Gaps = 32/271 (11%)

Query: 1   MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
           MATL DI VAA INIL+AFAF  AFAILRIQP NDRVYFPKWYLKGLR+SPL +G  V +
Sbjct: 1   MATLYDIAVAAAINILTAFAFFIAFAILRIQPCNDRVYFPKWYLKGLRNSPLSSGVFVKR 60

Query: 61  FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
           FVNLDFRSYLRFL+WM AALQMPEPELIDHAGLDSAVYLRIY  GLKIF+PIA L F++M
Sbjct: 61  FVNLDFRSYLRFLNWMLAALQMPEPELIDHAGLDSAVYLRIYWTGLKIFVPIALLAFSIM 120

Query: 121 VPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFW 180
           VPVNW+N TLEHS L YSNID LSISNVP GS                         RFW
Sbjct: 121 VPVNWSNGTLEHSGLTYSNIDKLSISNVPTGS------------------------PRFW 156

Query: 181 THLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYTT 240
           THLVMAYVF+FWTCYVLK+EYEIVA MRLHFLASE RRPDQFT    I+ N     + + 
Sbjct: 157 THLVMAYVFSFWTCYVLKKEYEIVATMRLHFLASERRRPDQFT---VIVRNVPSDPDESV 213

Query: 241 REVCS--FSFSFLQHIVRFR---NANKLLIL 266
            E+    F  +   H + F+   +ANKL  L
Sbjct: 214 LELVEHFFLVNHPNHFLGFQAVYDANKLFKL 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2089850	756	AT3G21620 "AT3G21620" [Arabido	0.636	0.228	0.629	3.2e-77
TAIR|locus:2130130	761	AT4G15430 "AT4G15430" [Arabido	0.566	0.202	0.675	2.3e-72
TAIR|locus:2008860	771	AT1G11960 "AT1G11960" [Arabido	0.566	0.199	0.681	2.8e-72
TAIR|locus:2027119	769	AT1G62320 "AT1G62320" [Arabido	0.636	0.224	0.595	1.4e-69
TAIR|locus:2120673	771	AT4G22120 [Arabidopsis thalian	0.566	0.199	0.632	1.6e-66
TAIR|locus:2140210	785	AT4G02900 [Arabidopsis thalian	0.636	0.220	0.532	5.3e-65
TAIR|locus:2134882	772	AT4G04340 [Arabidopsis thalian	0.566	0.199	0.626	1.5e-64
TAIR|locus:2031735	806	AT1G32090 "AT1G32090" [Arabido	0.566	0.191	0.560	5.7e-38
TAIR|locus:2096991	712	AT3G54510 [Arabidopsis thalian	0.511	0.195	0.273	9.6e-15
TAIR|locus:2102117	703	HYP1 "hypothetical protein 1"	0.433	0.167	0.304	2e-11

TAIR|locus:2089850 AT3G21620 "AT3G21620" [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 117/186 (62%), Positives = 133/186 (71%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MATL DIGVAATIN              R+QP+NDRVYFPKWYLKGLRSSP++TG   SK
Sbjct:     1 MATLTDIGVAATINILTAFAFFIAFAILRLQPVNDRVYFPKWYLKGLRSSPIKTGGFASK 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             FVNLDFRSY+RFL+WMP AL+MPEPELIDHAGLDS VYLRIYL+GLKIF PIAC+ F VM
Sbjct:    61 FVNLDFRSYIRFLNWMPQALRMPEPELIDHAGLDSVVYLRIYLLGLKIFFPIACIAFTVM 120

Query:   121 VPVNWTNKTLEHSK-LKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRF 179
             VPVNWTN TL+  K L +S+ID LSISN+P GS+R             W  L   +   F
Sbjct:   121 VPVNWTNSTLDQLKNLTFSDIDKLSISNIPTGSSRF------------WVHLCMAYVITF 168

Query:   180 WTHLVM 185
             WT  V+
Sbjct:   169 WTCFVL 174

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2130130 AT4G15430 "AT4G15430" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
 Identities = 106/157 (67%), Positives = 122/157 (77%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MAT+ DIGVAA IN              RIQP+NDRVYFPKWYLKGLRSS +QTG   SK
Sbjct:     1 MATINDIGVAAAINIVTAFAFLLAFAIFRIQPVNDRVYFPKWYLKGLRSSSIQTGGFGSK 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             F+NLDFRSY+RFL+WMP AL+MPEPEL+DHAGLDS VYLRIYL+GLKIF PIAC+ F  M
Sbjct:    61 FINLDFRSYIRFLNWMPEALKMPEPELVDHAGLDSVVYLRIYLLGLKIFFPIACVAFTTM 120

Query:   121 VPVNWTNKTLE---HSKLKYSNIDLLSISNVPLGSNR 154
             VPVNWTNK L+   HS + +S+ID LS+SN+P GS R
Sbjct:   121 VPVNWTNKGLDRLRHSNISFSDIDKLSLSNIPNGSPR 157

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009739 "response to gibberellin stimulus" evidence=RCA

GO:0009751 "response to salicylic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0048574 "long-day photoperiodism, flowering" evidence=RCA

TAIR|locus:2008860 AT1G11960 "AT1G11960" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 2.8e-72, Sum P(2) = 2.8e-72
 Identities = 107/157 (68%), Positives = 125/157 (79%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MATLGDIGVAA IN              RIQP NDRVYFPKWYLKG+RSSPL +G LVSK
Sbjct:     1 MATLGDIGVAAAINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             FVN++  SYLRFL+WMPAAL+MPEPELIDHAGLDSAVYLRIYLIGLKIF+PIA L ++++
Sbjct:    61 FVNVNLGSYLRFLNWMPAALKMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIALLAWSIL 120

Query:   121 VPVNWTNKTLEHSKLKY---SNIDLLSISNVPLGSNR 154
             VPVNWT+  L+ +KL+    S+ID LSISN+  GS+R
Sbjct:   121 VPVNWTSHGLQLAKLRNVTSSDIDKLSISNIENGSDR 157

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2027119 AT1G62320 "AT1G62320" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
 Identities = 112/188 (59%), Positives = 131/188 (69%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MATL DIG+AA IN              RIQP NDRVYFPKWYLKG+RSSP+ +G  VSK
Sbjct:     1 MATLADIGLAAAINILSALIFLLLFAILRIQPFNDRVYFPKWYLKGVRSSPVNSGAFVSK 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
              +NLDFRSY+RFL+WMP AL+MPEPELIDHAGLDSAVYLRIYLIGLKIF PIA L ++++
Sbjct:    61 IMNLDFRSYVRFLNWMPDALKMPEPELIDHAGLDSAVYLRIYLIGLKIFGPIALLSWSIL 120

Query:   121 VPVNWTNKTLEHSKLKY---SNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFK 177
             VPVNWT+  L+ +KL+    SNID LSISNV  GS+R             WA L   +  
Sbjct:   121 VPVNWTSDGLQLAKLRNVTSSNIDKLSISNVERGSDRF------------WAHLVMAYAF 168

Query:   178 RFWTHLVM 185
              FWT  V+
Sbjct:   169 TFWTCYVL 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2120673 AT4G22120 [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
 Identities = 100/158 (63%), Positives = 116/158 (73%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MATL DIGV+A IN              R+QP NDRVYF KWYLKGLRSSP + G    +
Sbjct:     1 MATLQDIGVSAGINILSAFVFFIIFAVLRLQPFNDRVYFSKWYLKGLRSSPARGGAFAQR 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             FVNLDFRSY++FL+WMP AL+MPEPELIDHAGLDS VYLRIY +GLKIF PIA L +AV+
Sbjct:    61 FVNLDFRSYMKFLNWMPEALKMPEPELIDHAGLDSVVYLRIYWLGLKIFTPIAVLAWAVL 120

Query:   121 VPVNWTNKTLEHSK----LKYSNIDLLSISNVPLGSNR 154
             VPVNWTN TLE +K    +  S+ID LS+SN+P  S R
Sbjct:   121 VPVNWTNNTLEMAKQLRNVTSSDIDKLSVSNIPEYSMR 158

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2140210 AT4G02900 [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 5.3e-65, Sum P(2) = 5.3e-65
 Identities = 99/186 (53%), Positives = 131/186 (70%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MA++ DIG++A IN              R+QP+NDRVYFPKWYLKG+R SP ++  ++++
Sbjct:     1 MASVQDIGLSAAINLLSAFAFLFAFAMLRLQPVNDRVYFPKWYLKGIRGSPTRSRGIMTR 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             FVNLD+ +Y++FL+WMPAALQMPEPELI+HAGLDSAVY+RIYL+GLK+F+PI  L F V+
Sbjct:    61 FVNLDWTTYVKFLNWMPAALQMPEPELIEHAGLDSAVYIRIYLLGLKMFVPITLLAFGVL 120

Query:   121 VPVNWTNKTLEH-SKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRF 179
             VPVNWT +TLE+   L +SN+D LSISNVP GS R             WA +   +   F
Sbjct:   121 VPVNWTGETLENIDDLTFSNVDKLSISNVPPGSPRF------------WAHITMTYVITF 168

Query:   180 WTHLVM 185
             WT  ++
Sbjct:   169 WTCYIL 174

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2134882 AT4G04340 [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
 Identities = 99/158 (62%), Positives = 113/158 (71%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSK 60
             MATL DIGV+A IN              R+QP NDRVYF KWYL+GLRSSP   G    +
Sbjct:     1 MATLKDIGVSAGINILTAFIFFIIFAFLRLQPFNDRVYFSKWYLRGLRSSPASGGGFAGR 60

Query:    61 FVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVM 120
             FVNL+ RSYL+FL WMP AL+MPE ELIDHAGLDS VYLRIY +GLKIF PIA L +AV+
Sbjct:    61 FVNLELRSYLKFLHWMPEALKMPERELIDHAGLDSVVYLRIYWLGLKIFAPIAMLAWAVL 120

Query:   121 VPVNWTNKTLE---HSK-LKYSNIDLLSISNVPLGSNR 154
             VPVNWTN  LE   H K +  S+ID L+ISN+P GSNR
Sbjct:   121 VPVNWTNNELELAKHFKNVTSSDIDKLTISNIPEGSNR 158

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2031735 AT1G32090 "AT1G32090" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 5.7e-38, P = 5.7e-38
 Identities = 88/157 (56%), Positives = 109/157 (69%)

Query:     1 MATLGDIGVAATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTG-TLVS 59
             MATL DIGV+A IN              RIQPINDRVYFPKWYL G R+SP ++  TLV 
Sbjct:     1 MATLQDIGVSALINLFGAFLFLIAFAVLRIQPINDRVYFPKWYLTGERNSPRRSDRTLVG 60

Query:    60 KFVNLDFRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAV 119
             KFVNL++++Y  FL+WMP A++M E E+I HAGLDSA++LRIY +GLKIF P+  L   V
Sbjct:    61 KFVNLNYKTYFTFLNWMPQAMKMSESEIIRHAGLDSAIFLRIYTLGLKIFAPVMVLALVV 120

Query:   120 MVPVNWTNKTLEHSK--LKYSNIDLLSISNVPLGSNR 154
             +VPVN ++ TL   K  L  SNID LSISNV   S++
Sbjct:   121 LVPVNVSSGTLFFLKKELVVSNIDKLSISNVQPKSSK 157

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2096991 AT3G54510 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
 Identities = 40/146 (27%), Positives = 78/146 (53%)

Query:    10 AATINXXXXXXXXXXXXXXRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSY 69
             +A+IN              + QP N  VY+ +         PL      S   +L    +
Sbjct:     9 SASINIGLAVVALWLFSVLKKQPRNAVVYYARRLSDRHHHRPL------SLHSSLCLPRF 62

Query:    70 LRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKT 129
             L  ++W+P A ++PE E++   GLD+ V +R++  G++ F+  + LG ++++PV++ N++
Sbjct:    63 LPSVAWIPRAFRVPEDEILSRHGLDALVLIRLFKFGIRFFLMCSLLGASLLLPVDYYNES 122

Query:   130 LEHSKLKYSNIDLLSISNVPLGSNRM 155
                ++ +YS +D  +ISN+  GSN++
Sbjct:   123 DLPTRREYS-MDAFTISNITRGSNKL 147

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

TAIR|locus:2102117 HYP1 "hypothetical protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
 Identities = 39/128 (30%), Positives = 69/128 (53%)

Query:    29 RIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMPEPELI 88
             R QP N  VY P+   K  +S   Q+    ++F NL+    L    W+  AL+    E++
Sbjct:    28 RKQPSNVTVYGPRLVKKDGKSQ--QS----NEF-NLE--RLLPTAGWVKRALEPTNDEIL 78

Query:    89 DHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHS-KLKYSNIDLLSISN 147
              + GLD+ V++R+++  +++F   + +G  +++PVN+     E    L   ++D  SISN
Sbjct:    79 SNLGLDALVFIRVFVFSIRVFSFASVVGIFILLPVNYMGTEFEEFFDLPKKSMDNFSISN 138

Query:   148 VPLGSNRM 155
             V  GSN++
Sbjct:   139 VNDGSNKL 146

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
pfam13967	151	pfam13967, RSN1_TM, Late exocytosis, associated wi	5e-39
COG5594	827	COG5594, COG5594, Uncharacterized integral membran	5e-12

>gnl|CDD|222479 pfam13967, RSN1_TM, Late exocytosis, associated with Golgi transport

 Score =  133 bits (336), Expect = 5e-39
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 44/195 (22%)

Query: 6   DIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLD 65
               +  IN++ A  F   F+ILR +  N RVY P+ YL G                   
Sbjct: 1   AFLTSLVINLVLALVFFLLFSILRPK--NKRVYAPRTYLAGPEEERTPPPPPRG------ 52

Query: 66  FRSYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNW 125
                    W+P  L++ + E++ HAGLD+ V+LR   +G+KIF+    +G+ +++PVN 
Sbjct: 53  ------LFGWIPPLLKISDEEILQHAGLDAYVFLRFLKMGIKIFLVGCVIGWPILLPVNA 106

Query: 126 TNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVM 185
           T    E      + +D LSISNV  GSNR+                        W H+V+
Sbjct: 107 TGGNGE------TGLDKLSISNVVEGSNRL------------------------WAHVVV 136

Query: 186 AYVFTFWTCYVLKRE 200
           AY+FT + CY+L RE
Sbjct: 137 AYIFTGFVCYLLYRE 151

This family represents the first three transmembrane regions of 11-TM proteins involved in vesicle transport. In S. cerevisiae these proteins are members of the yeast facilitator superfamily and are integral membrane proteins localised to the cell periphery, in particular to the bud-neck region. The distribution is consistent with a role in late exocytosis which is in agreement with the proteins' ability to substitute for the function of Sro7p, required for the sorting of the protein Enap1 into Golgi-derived vesicles destined for the cell surface. Length = 151

>gnl|CDD|227881 COG5594, COG5594, Uncharacterized integral membrane protein [Function unknown]

 Score = 65.5 bits (160), Expect = 5e-12
 Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 49/209 (23%)

Query: 11  ATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGL---RSSPLQTGTLVSKFVNLDFR 67
                L    FL  F ILR      R+Y P+    G       P  +             
Sbjct: 28  LVFAGLIFLVFLILFLILR--KRWKRLYAPRTNFDGQNECLPEPNPSS------------ 73

Query: 68  SYLRFLSWMPAALQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWT- 126
               +  W+   +++P+  L+ +AGLD   +LR   + +K+   ++ +   +++PVN+  
Sbjct: 74  ----YWGWLEPLVKIPDEFLLQYAGLDGYFFLRFLKMLIKLLFILSLILIPILLPVNYHF 129

Query: 127 -NKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYSNLGSWAFLGNVFFKRFWTHLVM 185
              T  +S    S +D LSISNV   SN                        R + H+ +
Sbjct: 130 QKATNGNSD-SESGLDKLSISNVS-PSN------------------------RLYAHVFL 163

Query: 186 AYVFTFWTCYVLKREYEIVAAMRLHFLAS 214
           ++ F  +  +++ RE      +R  +L S
Sbjct: 164 SWFFFGYVLFIIFRELRFYVVLRQAYLRS 192

Length = 827

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
PF13967	157	RSN1_TM: Late exocytosis, associated with Golgi tr	100.0
COG5594	827	Uncharacterized integral membrane protein [Functio	100.0
KOG1134	728	consensus Uncharacterized conserved protein [Gener	100.0

>PF13967 RSN1_TM: Late exocytosis, associated with Golgi transport

Probab=100.00  E-value=1.4e-41  Score=287.77  Aligned_cols=155  Identities=35%  Similarity=0.657  Sum_probs=137.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccceeccCC--CCCCCCCCccccccccccccccccccccchhhhccCC
Q 024113            6 DIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKG--LRSSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQMP   83 (272)
Q Consensus         6 ~~~tsl~in~~i~~~~lllF~~LR~rp~~~~vY~PR~~l~~--~~~~P~~~~~~~~~~~~~~~~~~~~~f~WI~~~~~~~   83 (272)
                      +|.+|+++|++++++++++||+||+|  ++++|+||.+.++  .+.+|++              .++|+|+||+++++++
T Consensus         1 s~~~sl~~~~~i~~~~~~~F~~lR~~--~~~iY~pR~~~~~~~~~~~~~~--------------~~~g~f~Wi~~~~~~~   64 (157)
T PF13967_consen    1 SFLTSLAINLIIFLVLLLLFCILRKR--FPRIYQPRSYLPHPEPERPPPL--------------PSRGFFGWIKPVFKIS   64 (157)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhc--cHHhcccccccCCcccccCCCC--------------CCCCchHHHHHHHcCC
Confidence            58999999999999999999999975  9999999998753  1111211              1458999999999999


Q ss_pred             hhHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhhheeeeeeecCCccccCccCCCCCCccccccCCCCCCccchhhhhhc
Q 024113           84 EPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQRFYS  163 (272)
Q Consensus        84 d~~il~~~GLDA~vfLrFlr~~~~lf~~~sv~~~~ILlPvn~~~~~~~~~~~~~~~l~~ltisNv~~~s~~~~~~~~~~~  163 (272)
                      |+|+++++|+||++||||+|||+++|+++++++++||+|||+++++..++..+.++++++|++|++++++          
T Consensus        65 d~~i~~~~GlDa~~flrflr~~~~~f~~~~i~~~~vLlPi~~~~~~~~~~~~~~~~l~~~tisnv~~~s~----------  134 (157)
T PF13967_consen   65 DDEILRHCGLDAYVFLRFLRMLIKIFLFLSILSLPVLLPINYTGGDDDGDSDNESGLDRLTISNVPKGSS----------  134 (157)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHheeeeEEeCCCCccccccccccccccHHhhcCCCC----------
Confidence            9999999999999999999999999999999999999999999988754433337999999999998877          


Q ss_pred             ccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 024113          164 NLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKRE  200 (272)
Q Consensus       164 ~~~~~~~~~~~~~~~lw~hvv~ayl~t~~~l~lL~~e  200 (272)
                                    ++|+|++++|+++++++|++++|
T Consensus       135 --------------~lw~h~v~~~i~~~~~~~~l~~E  157 (157)
T PF13967_consen  135 --------------RLWAHVVFAYIFTFYVLYLLWRE  157 (157)
T ss_pred             --------------eehHHHHHHHHHHHHHHhhheeC
Confidence                          99999999999999999999987

>COG5594 Uncharacterized integral membrane protein [Function unknown]

Probab=100.00  E-value=9.4e-38  Score=313.24  Aligned_cols=222  Identities=23%  Similarity=0.354  Sum_probs=187.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccceeccCCCC-CCCCCCccccccccccccccccccccchhhhcc
Q 024113            3 TLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLR-SSPLQTGTLVSKFVNLDFRSYLRFLSWMPAALQ   81 (272)
Q Consensus         3 ~~~~~~tsl~in~~i~~~~lllF~~LR~rp~~~~vY~PR~~l~~~~-~~P~~~~~~~~~~~~~~~~~~~~~f~WI~~~~~   81 (272)
                      +.+++.||+.++..++++++.+|++||+|  ++++|+||+...+.. +.|.|              .+.|+|||+.++++
T Consensus        20 s~~~~~t~l~f~~~~~~~~l~~f~iLR~r--~k~lY~pr~~~~~~~~~~P~~--------------~~ss~~gWl~~L~~   83 (827)
T COG5594          20 STSAVITQLVFAGLIFLVFLILFLILRKR--WKRLYAPRTNFDGQNECLPEP--------------NPSSYWGWLEPLVK   83 (827)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHH--HhHhcCcceeecCCCcccCCC--------------CccchHHHHHHHHh
Confidence            57899999999999999999999999965  999999999886543 23322              25689999999999


Q ss_pred             CChhHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhhheeeeeeecCCccccC-ccCCCCCCccccccCCCCCCccchhhh
Q 024113           82 MPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHS-KLKYSNIDLLSISNVPLGSNRMSSLQR  160 (272)
Q Consensus        82 ~~d~~il~~~GLDA~vfLrFlr~~~~lf~~~sv~~~~ILlPvn~~~~~~~~~-~~~~~~l~~ltisNv~~~s~~~~~~~~  160 (272)
                      ++|+.+++++|+|||+||||+|||+++|+++|++++|||+|||++.+..+.. ..+.+++++++++|+.+ ++       
T Consensus        84 i~d~~~l~~aGlD~y~fLrflkm~~~~~~i~sl~~ipIL~Pvn~~~~~~~~gn~~s~s~l~~Ls~~Nv~~-~n-------  155 (827)
T COG5594          84 IPDEFLLQYAGLDGYFFLRFLKMLIKLLFILSLILIPILLPVNYHFQKATNGNSDSESGLDKLSISNVSP-SN-------  155 (827)
T ss_pred             CCHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHhHEeeeeeecccccccCCccchhhhhHhhhhcccC-CC-------
Confidence            9999999999999999999999999999999999999999999988654321 23578999999999975 55       


Q ss_pred             hhcccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--C-------CCccceEEeccCCC
Q 024113          161 FYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEH--R-------RPDQFTSFACIIHN  231 (272)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~lw~hvv~ayl~t~~~l~lL~~e~~~~v~lR~~yl~s~~--~-------~~~~rTVlV~~IP~  231 (272)
                                       ++|+|++..|++.++++|.+++|++.|+.+||+|++++.  .       +.++|||+++++|+
T Consensus       156 -----------------~~~aHvf~~~~f~~~vlfii~~el~~y~~lr~a~~~~p~y~qs~~~~~~~~ssRTvlis~LP~  218 (827)
T COG5594         156 -----------------RLYAHVFLSWFFFGYVLFIIFRELRFYVVLRQAYLRSPLYQQSLLTLQNNLSSRTVLISGLPS  218 (827)
T ss_pred             -----------------ceeeeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHhhccCCCCceEEeecCCh
Confidence                             899999999999999999999999999999999999986  2       34889999999999


Q ss_pred             ccccccccccceeccccccce-----eEEEEcccchHHHHHhhh
Q 024113          232 FEFILEYTTREVCSFSFSFLQ-----HIVRFRNANKLLILFQVL  270 (272)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~~  270 (272)
                      +     .+++|.+...+.=++     ..++.|+.++|++++.+-
T Consensus       219 ~-----~~~~e~L~~~~~kl~~~~i~~~~l~~~~~~l~~l~k~R  257 (827)
T COG5594         219 E-----LRSDEELKELFDKLKVGEIDSDVLCRDLGTLQELYKER  257 (827)
T ss_pred             h-----hcCchhHHHHHhhcCeeeeccchhhhhhHHHHHHHHhH
Confidence            7     577777665422222     333336688888876543

>KOG1134 consensus Uncharacterized conserved protein [General function prediction only]

Probab=100.00  E-value=1.1e-33  Score=288.08  Aligned_cols=230  Identities=42%  Similarity=0.706  Sum_probs=192.4

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccceeccCCCCCCCCCCcccccccccccccccccc-ccchhhh
Q 024113            1 MATLGDIGVAATINILSAFAFLSAFAILRIQPINDRVYFPKWYLKGLRSSPLQTGTLVSKFVNLDFRSYLRF-LSWMPAA   79 (272)
Q Consensus         1 ~~~~~~~~tsl~in~~i~~~~lllF~~LR~rp~~~~vY~PR~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~-f~WI~~~   79 (272)
                      |++++++..+-.++...+..++.+|.+++.+|++.++|.|++.+.+.++.|....      .   ...+++. |+|+.++
T Consensus         1 ~~~~~~~~~~s~~~~~~~~~~~~~~~~l~l~~~~~~vy~~~~~l~~~~~~~~~~~------~---~~~~~~~~~~Wl~~~   71 (728)
T KOG1134|consen    1 MATFESIGISSTLNLNSAFAFLFLFLFLRLQPRNFRVYLPIWSLKGLRSSPIESK------V---EPVPSSVNFGWLPAL   71 (728)
T ss_pred             CCccccccccccccchhhHHHHHHHHHHHhhhcceEEEEeeeeeccccCcCcccc------C---CCCCCcccccchHHH
Confidence            5667777777778888888889999999988999999999998877654332211      0   1123344 9999999


Q ss_pred             ccCChhHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhhheeeeeeecCCccccCccCCCCCCccccccCCCCCCccchhh
Q 024113           80 LQMPEPELIDHAGLDSAVYLRIYLIGLKIFIPIACLGFAVMVPVNWTNKTLEHSKLKYSNIDLLSISNVPLGSNRMSSLQ  159 (272)
Q Consensus        80 ~~~~d~~il~~~GLDA~vfLrFlr~~~~lf~~~sv~~~~ILlPvn~~~~~~~~~~~~~~~l~~ltisNv~~~s~~~~~~~  159 (272)
                      ++++|+|+++++|+||++||||+++++++|+++++++++||+|||+++++.+..+  .++++++|++|++.+|+      
T Consensus        72 ~k~~~~ei~~~~GlDa~~~L~~~~~~~~lf~~~~~l~~~illPVn~~~~~~~~~~--~~s~~~ls~snv~~~s~------  143 (728)
T KOG1134|consen   72 LKIPDEEILEHAGLDAYVFLRFLKLGIKLFAVLSLLSVPILLPVNWTNGNLELGN--EDSLDKLSISNVQPGSS------  143 (728)
T ss_pred             hcCCHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhheEEeeEEEecCcccccc--cchhhhhhheeccCCCC------
Confidence            9999999999999999999999999999999999999999999999999885432  23799999999999888      


Q ss_pred             hhhcccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceEEeccCCCcccccccc
Q 024113          160 RFYSNLGSWAFLGNVFFKRFWTHLVMAYVFTFWTCYVLKREYEIVAAMRLHFLASEHRRPDQFTSFACIIHNFEFILEYT  239 (272)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~lw~hvv~ayl~t~~~l~lL~~e~~~~v~lR~~yl~s~~~~~~~rTVlV~~IP~~~~~~~~~  239 (272)
                                        ++|+|++++|+++++++|++++||++++.+||+|+.++.+++++.|+++.++|..    +..
T Consensus       144 ------------------~lw~Hv~~~y~~~~~~~~~l~~e~~~~~~~R~~~l~~~~~~~~~~s~~~~~~~~~----~~~  201 (728)
T KOG1134|consen  144 ------------------LLWAHVFFTYLFTFFTLFILYREYKHVASIRQAYLASPKYRPDQSSVLVRNVPPP----DGV  201 (728)
T ss_pred             ------------------CEEEEeehhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcCccccchhhhcccCC----CCC
Confidence                              8999999999999999999999999999999999999998999999999999954    343


Q ss_pred             ccceeccc-------cccceeEEEEcccchHHHHHhhh
Q 024113          240 TREVCSFS-------FSFLQHIVRFRNANKLLILFQVL  270 (272)
Q Consensus       240 ~~~~~~~~-------~~~~~~~~~~~~~~~l~~l~~~~  270 (272)
                      +...+.+.       .++..|++. +|.+||.++.++.
T Consensus       202 s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~~  238 (728)
T KOG1134|consen  202 SVSVIVRHFFSLNHPVKVRSHQVV-YNESKLSKLLSKL  238 (728)
T ss_pred             chhhHHhhhhhccCCceeehhHHH-hhHHHHHHHHHHH
Confidence            44333332       566778888 9999999887653

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00