Citrus Sinensis ID: 024175

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
Protein Sequence
MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Secondary Structure (PSIPRED)
ccEEEEEEEEEEEEEEEccHHHHHHHHcccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MALGGFFIWSYSYQLIKQSSVRYKALAqaaepeevpkevnkdFDANAQTQllrgttddqeDVSVLVAStksssdpecqiivpqashlqtrKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRnliigdsaplrVIQDSIEilgdgtipcITLILggnliqglrsstlkplIIIAVVCVRYIALPFIGVWVVKAAAalgflpsdplyHYVLMVQftlppamnigtMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Flexible Loop (DISEMBL)
MALGGFFIWSYSYQLIKQSSVRYKALAQAaepeevpkevnKDFDANAQTQllrgttddqedVSVLVAstksssdpecQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Low Complexity Region (SEG)
MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSleflhqlleellapptlaaIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered region (IsUnstruct)
**LGGFFIWSYSYQLIKQSSVRYKAL***************************************************QIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL*
Disordered Region (DISOPRED)
MALGGFFIWSYSYQLI********************************************************************************RSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered Region (DISEMBL)
MALGGFFIWSYSYQLIKQSSVRY**************EVNKDFDANAQTQLLRGTTDDQEDVSVLVA********ECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Disordered Region (DISPRO)
MALGGFFIWSYSYQLIKQSSVRYKALAQ**************************************************************KESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
255561457	406	auxin:hydrogen symporter, putative [Rici	0.937	0.625	0.653	3e-93
224081467	397	predicted protein [Populus trichocarpa]	0.904	0.617	0.627	1e-91
359480743	421	PREDICTED: uncharacterized transporter Y	0.981	0.631	0.613	1e-90
147765756	436	hypothetical protein VITISV_012649 [Viti	0.981	0.610	0.613	2e-90
356496547	419	PREDICTED: uncharacterized transporter Y	0.977	0.632	0.562	2e-84
356538399	419	PREDICTED: uncharacterized transporter Y	0.977	0.632	0.558	3e-84
18398448	396	auxin efflux carrier-like protein [Arabi	0.892	0.611	0.564	6e-84
21536598	396	unknown [Arabidopsis thaliana]	0.892	0.611	0.557	5e-83
148608655	412	auxin hydrogen symporter [Malus x domest	0.959	0.631	0.571	2e-82
357484233	420	Transporter, putative [Medicago truncatu	0.977	0.630	0.542	3e-81

>gi|255561457|ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223539130|gb|EEF40726.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 177/271 (65%), Positives = 212/271 (78%), Gaps = 17/271 (6%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MA+GGF+IW+Y+Y LI+ S+ + +A+ QA E  E  K  NKD +A  +T LL+G  +DQE
Sbjct: 153 MAIGGFYIWTYTYHLIRTSATKLRAI-QAEE--EASKAPNKDLEATPETHLLKG--EDQE 207

Query: 61  DVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVG 120
            V + V S KS  D E Q   P +S         W + +  L Q++EELLAPPT+AAI G
Sbjct: 208 HVVISVPSIKSVDDQESQ---PASS---------WSKWIGILRQIMEELLAPPTIAAIFG 255

Query: 121 FIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLII 180
           F+FGA  +LRNLIIG SAPLRVIQDSI++LGDGTIPCITLILGGNLIQGLRSS +KP II
Sbjct: 256 FLFGATTFLRNLIIGSSAPLRVIQDSIKLLGDGTIPCITLILGGNLIQGLRSSRIKPWII 315

Query: 181 IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVA 240
           + V+ VR++ LP IG+W+VKAA +LGFLPSDPLYH+VLMVQ+TLPPAMNIGTMTQLFDV 
Sbjct: 316 VGVLFVRFMMLPAIGIWLVKAAGSLGFLPSDPLYHFVLMVQYTLPPAMNIGTMTQLFDVG 375

Query: 241 QEECSVLFLWTYLVAALALTGWSMVYMWILS 271
           QEECSVLFLWTYLVAALALT WS +YMWILS
Sbjct: 376 QEECSVLFLWTYLVAALALTFWSTIYMWILS 406

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081467|ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|222855870|gb|EEE93417.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/271 (62%), Positives = 202/271 (74%), Gaps = 26/271 (9%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MALGGFFIW+Y++ LI+ S+ + KAL    E  + P   N DFDA+ +T LL G   DQE
Sbjct: 153 MALGGFFIWTYTFHLIRTSAAKLKALQAVVEASKAP---NNDFDASQETHLLIG--QDQE 207

Query: 61  DVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVG 120
           +V++       SS                     W + + FLHQ+LEELL PPT+AAI+G
Sbjct: 208 NVAIEHGKGNVSS---------------------WTKLIGFLHQILEELLEPPTIAAILG 246

Query: 121 FIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLII 180
           FIFGA  +LRNLIIG  APLRVIQDSI++LGDGTIPCITLILGGNL +GLR+S +K  I+
Sbjct: 247 FIFGATTFLRNLIIGSEAPLRVIQDSIKLLGDGTIPCITLILGGNLTEGLRASKIKSWIV 306

Query: 181 IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVA 240
           + V+CVRYI LP IG+WVVKAA  LGFLPSDPL+HYVLM+Q+TLPPAMNIGTMTQLFDV 
Sbjct: 307 VGVICVRYIILPAIGMWVVKAAGHLGFLPSDPLFHYVLMIQYTLPPAMNIGTMTQLFDVG 366

Query: 241 QEECSVLFLWTYLVAALALTGWSMVYMWILS 271
           QEECSVLFLWTYLVAALALT WS ++MWILS
Sbjct: 367 QEECSVLFLWTYLVAALALTAWSTIFMWILS 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480743|ref|XP_002276744.2| PREDICTED: uncharacterized transporter YBR287W-like [Vitis vinifera] gi|296082565|emb|CBI21570.3| unnamed protein product [Vitis vinifera]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 167/272 (61%), Positives = 205/272 (75%), Gaps = 6/272 (2%)

Query: 2   ALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQED 61
           ALGG FIW+Y+YQLI+ S  +Y A+    +  +VP   NK+ DAN +T LL+G  D +  
Sbjct: 154 ALGGIFIWTYTYQLIRSSVTKYYAIQDVKDVIKVP---NKELDANKETHLLKGE-DQEHG 209

Query: 62  VSVLVASTKSSSDPECQIIVPQ--ASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
            S    S  +  D E Q+IV Q  A  L+  KESFW R      Q+++ELL+PPTL AI+
Sbjct: 210 TSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAGIASQMMKELLSPPTLGAIL 269

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GF+FGAV WL+N + GD APLRV+QDS+++L +GTIPCITLILGGNL +GLRSS +KP I
Sbjct: 270 GFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITLILGGNLTRGLRSSGIKPSI 329

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           IIAV+CVRY  LP IG+ VVKAA+ LGF+ SDPLY YVLM+QFTLPPAMNIGTMT+LF+V
Sbjct: 330 IIAVICVRYFILPLIGIAVVKAASNLGFVLSDPLYLYVLMIQFTLPPAMNIGTMTELFNV 389

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
            QEECSVLFLWTYL AALALT WS +YMW+LS
Sbjct: 390 GQEECSVLFLWTYLFAALALTVWSTIYMWLLS 421

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765756|emb|CAN62432.1| hypothetical protein VITISV_012649 [Vitis vinifera]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 167/272 (61%), Positives = 205/272 (75%), Gaps = 6/272 (2%)

Query: 2   ALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQED 61
           ALGG FIW+Y+YQLI+ S  +Y A+    +  +VP   NK+ DAN +T LL+G  D +  
Sbjct: 169 ALGGIFIWTYTYQLIRSSVTKYYAIQDVKDVIKVP---NKELDANKETHLLKGE-DQEHG 224

Query: 62  VSVLVASTKSSSDPECQIIVPQ--ASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
            S    S  +  D E Q+IV Q  A  L+  KESFW R      Q+++ELL+PPTL AI+
Sbjct: 225 TSSFPPSNSTGEDVEKQVIVSQESAGSLEDGKESFWARVAGIASQMMKELLSPPTLGAIL 284

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GF+FGAV WL+N + GD APLRV+QDS+++L +GTIPCITLILGGNL +GLRSS +KP I
Sbjct: 285 GFVFGAVPWLKNFLTGDEAPLRVVQDSVKLLANGTIPCITLILGGNLTRGLRSSGIKPSI 344

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           IIAV+CVRY  LP IG+ VVKAA+ LGF+ SDPLY YVLM+QFTLPPAMNIGTMT+LF+V
Sbjct: 345 IIAVICVRYFILPLIGIAVVKAASNLGFVLSDPLYLYVLMIQFTLPPAMNIGTMTELFNV 404

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
            QEECSVLFLWTYL AALALT WS +YMW+LS
Sbjct: 405 GQEECSVLFLWTYLFAALALTVWSTIYMWLLS 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496547|ref|XP_003517128.1| PREDICTED: uncharacterized transporter YBR287W-like isoform 2 [Glycine max]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/272 (56%), Positives = 205/272 (75%), Gaps = 7/272 (2%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MALGG FIW+Y+YQ +K  S+++KAL +AAE  +VP   NKDFDANA+T LL+   +D E
Sbjct: 154 MALGGIFIWTYTYQTVKSRSLKFKAL-EAAEIVKVP---NKDFDANAETHLLK--DNDSE 207

Query: 61  DVSVLVASTKSSSDPECQIIVPQ-ASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
           D ++ V ++    D E QIIV Q  S++  + ES W R +E +  LL EL++PP +A   
Sbjct: 208 DTTIEVPTSTYIGDTENQIIVDQDQSNVSKKTESSWHRMVEVMSHLLAELVSPPAIATFF 267

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GF+FGAV WLRNLIIGD+APLRVIQDS+++LG+GTIPCITL+LGGNL QGL+SS++KPL 
Sbjct: 268 GFLFGAVAWLRNLIIGDNAPLRVIQDSLQLLGNGTIPCITLLLGGNLTQGLKSSSVKPLT 327

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           + +++  R   LP IG+++V+AAA LG LP DPL+ YVL++Q+ +PPAMNI T+ QLF+V
Sbjct: 328 LTSIIIARLFLLPVIGLFIVRAAANLGLLPVDPLFQYVLVMQYAMPPAMNISTVAQLFEV 387

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
             EECSV+ LWTY  AA+ALT WS   +W+LS
Sbjct: 388 GNEECSVILLWTYTAAAIALTAWSTFLLWLLS 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538399|ref|XP_003537691.1| PREDICTED: uncharacterized transporter YBR287W-like [Glycine max]

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/272 (55%), Positives = 205/272 (75%), Gaps = 7/272 (2%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MALGG FIW+Y+YQ +K  S+++KAL +AAE  +VP   NKDFDANA+T LL+   +D E
Sbjct: 154 MALGGIFIWTYTYQTVKSRSLKFKAL-EAAEIVKVP---NKDFDANAETHLLK--DNDSE 207

Query: 61  DVSVLVASTKSSSDPECQIIVPQ-ASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
           D ++ V ++    D E QIIV Q  S++  ++ES W R +E +  LL EL++PP +A   
Sbjct: 208 DTTIQVPTSTYIGDTENQIIVDQDQSNVSKKRESSWHRMVEVMSHLLAELMSPPAIATFF 267

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GF+FGAV WLRN+IIGD APLRVIQDS+++LG+GTIPCITL+LGGNL QGL+SS++KPL 
Sbjct: 268 GFLFGAVAWLRNIIIGDDAPLRVIQDSLQLLGNGTIPCITLLLGGNLAQGLKSSSVKPLT 327

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           +I+++  R + LP IG+++V+AAA    LP DPL+ YVL++Q+ +PPAMNI TM QLF+V
Sbjct: 328 LISIIIARLLLLPIIGLFIVRAAANFDLLPVDPLFQYVLVMQYAMPPAMNISTMAQLFEV 387

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
             EECSV+ LWTY  AA+ALT WS   +W+LS
Sbjct: 388 GNEECSVILLWTYSAAAIALTAWSTFLLWLLS 419

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398448|ref|NP_565417.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|30680004|ref|NP_849964.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|42570811|ref|NP_973479.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|79322403|ref|NP_001031363.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|4914371|gb|AAD32907.1| expressed protein [Arabidopsis thaliana] gi|110740748|dbj|BAE98473.1| hypothetical protein [Arabidopsis thaliana] gi|330251540|gb|AEC06634.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251541|gb|AEC06635.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251542|gb|AEC06636.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|330251543|gb|AEC06637.1| auxin efflux carrier-like protein [Arabidopsis thaliana]

 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 153/271 (56%), Positives = 204/271 (75%), Gaps = 29/271 (10%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVP-KEVNKDFDANAQTQLLRGTTDDQ 59
           MALGGF+IW+Y+++LIK S+++ +A+    E E++  K  N D +A+ +T LL G  +D+
Sbjct: 153 MALGGFYIWTYTFRLIKGSAMKVQAIE---ESEKIAIKSSNSDLEADHKTHLL-GAPEDK 208

Query: 60  EDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
           E+  V                          K  FW++ ++FLH++LEELLAPPTL AI+
Sbjct: 209 ENKVV------------------------KEKTGFWRKGVDFLHEILEELLAPPTLGAII 244

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+ILGGNLIQGLRSS +KP++
Sbjct: 245 GFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTIILGGNLIQGLRSSAVKPMV 304

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           ++ +VCVRYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+QFTLPPAMNIGTMTQL++V
Sbjct: 305 VLGIVCVRYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQFTLPPAMNIGTMTQLYNV 364

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWIL 270
           AQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct: 365 AQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21536598|gb|AAM60930.1| unknown [Arabidopsis thaliana]

 Score =  313 bits (802), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/271 (55%), Positives = 203/271 (74%), Gaps = 29/271 (10%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVP-KEVNKDFDANAQTQLLRGTTDDQ 59
           MALGGF+IW+Y+++LIK S+++ +A+    E E++  K  N D +A+ +T LL G  +D+
Sbjct: 153 MALGGFYIWTYTFRLIKGSAMKVQAIE---ESEKIAIKSSNSDLEADHKTHLL-GAPEDK 208

Query: 60  EDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIV 119
           E+  V                          +  FW++ ++FLH++LEELLAPPTL AI+
Sbjct: 209 ENKVV------------------------KEETGFWRKGVDFLHEILEELLAPPTLGAII 244

Query: 120 GFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLI 179
           GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+ILGGNLIQGLRSS +KP++
Sbjct: 245 GFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTIILGGNLIQGLRSSAVKPMV 304

Query: 180 IIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDV 239
           ++ +VC RYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+QFTLPPAMNIGTMTQL++V
Sbjct: 305 VLGIVCARYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQFTLPPAMNIGTMTQLYNV 364

Query: 240 AQEECSVLFLWTYLVAALALTGWSMVYMWIL 270
           AQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct: 365 AQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148608655|gb|ABQ95657.1| auxin hydrogen symporter [Malus x domestica]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 155/271 (57%), Positives = 198/271 (73%), Gaps = 11/271 (4%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MALG FFIW+YSYQLI+ SS+R+K L  A E EE  K  N D DA+ +T LL+   +D+E
Sbjct: 153 MALGNFFIWTYSYQLIRTSSIRWKELQAAEETEEASKRRNTDLDADEETHLLK--REDEE 210

Query: 61  DVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWKRSLEFLHQLLEELLAPPTLAAIVG 120
             +V+V+ T  +      I+ P  S++      F  + LEF  Q+L ELLAPPT+AAIVG
Sbjct: 211 QAAVVVSETSVNQ----AIVTPDESNM-----PFSHKVLEFFRQILHELLAPPTVAAIVG 261

Query: 121 FIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLII 180
           F  G++  ++N+IIGD APL VI+DSI  LG+GTIPCITLILGGNLIQGLR  T+K   +
Sbjct: 262 FFVGSITVIKNIIIGDDAPLHVIEDSITRLGNGTIPCITLILGGNLIQGLRKPTIKVPTL 321

Query: 181 IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVA 240
           + V+  +YI +P IG+ +V  A  LG LPS+ L+H+VLM+QFTLPPAMNIGTM QL+DVA
Sbjct: 322 LGVIIAKYIVMPAIGIGIVTGADKLGLLPSNSLFHFVLMLQFTLPPAMNIGTMAQLYDVA 381

Query: 241 QEECSVLFLWTYLVAALALTGWSMVYMWILS 271
           + ECSV+FLWTYLVAALALT WS ++MWILS
Sbjct: 382 EAECSVIFLWTYLVAALALTVWSTIFMWILS 412

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484233|ref|XP_003612404.1| Transporter, putative [Medicago truncatula] gi|355513739|gb|AES95362.1| Transporter, putative [Medicago truncatula]

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/273 (54%), Positives = 194/273 (71%), Gaps = 8/273 (2%)

Query: 1   MALGGFFIWSYSYQLIKQSSVRYKALAQAAEPEEVPKEVNKDFDANAQTQLLRGTTDDQE 60
           MALGG FIW+Y+YQ IK  S+++KAL    E  E+ K  NKD D NA T LL+G   D E
Sbjct: 154 MALGGIFIWTYTYQTIKSRSLKFKAL----EAAEILKAPNKDLDGNADTPLLKG--KDNE 207

Query: 61  DVSVLVASTKSSSDPECQIIVPQASH--LQTRKESFWKRSLEFLHQLLEELLAPPTLAAI 118
           + ++ V+ +    D E QII  Q     L+  K+SF+ R +E L  LL EL++PP +A  
Sbjct: 208 NTAIEVSPSSYIEDSESQIIDEQDQSIVLKKEKQSFFNRMIEVLSHLLAELMSPPAIATF 267

Query: 119 VGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPL 178
            GF+FGAV WLRNLIIGD+AP  VIQD++E+LG+GTIPCITL+LGGNL  GL+SS++KPL
Sbjct: 268 FGFLFGAVAWLRNLIIGDNAPFSVIQDTLELLGNGTIPCITLLLGGNLTAGLKSSSVKPL 327

Query: 179 IIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFD 238
            +I+++  R   LP IG+++VKA A+ G LP DPL+ Y L++Q+ +PPAMNI TM QLFD
Sbjct: 328 TLISIIITRLFVLPVIGLFIVKAVASFGILPVDPLFQYTLVMQYAMPPAMNISTMAQLFD 387

Query: 239 VAQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
           V  EECSV+ LWTY  AA+ALT WS   +W+LS
Sbjct: 388 VGNEECSVILLWTYSAAAIALTSWSTFLLWLLS 420

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
TAIR|locus:2156847	395	AT5G65980 "AT5G65980" [Arabido	0.568	0.389	0.714	2.9e-68
TAIR|locus:2053908	396	AT2G17500 [Arabidopsis thalian	0.789	0.540	0.534	4.3e-61
TAIR|locus:2011731	390	AT1G76520 "AT1G76520" [Arabido	0.568	0.394	0.493	9.7e-46
TAIR|locus:2011746	415	AT1G76530 "AT1G76530" [Arabido	0.568	0.371	0.515	4.2e-40
TAIR|locus:2185123	431	AT5G01990 "AT5G01990" [Arabido	0.560	0.352	0.389	7.3e-27
TAIR|locus:2026366	457	AT1G71090 "AT1G71090" [Arabido	0.549	0.326	0.34	8.3e-22
CGD|CAL0005962	446	orf19.6117 [Candida albicans (	0.501	0.304	0.284	4.9e-05
UNIPROTKB|Q59RR6	446	ZSP11 "Potential Auxin Efflux	0.501	0.304	0.284	4.9e-05
CGD|CAL0001802	446	orf19.733 [Candida albicans (t	0.501	0.304	0.284	6.3e-05
UNIPROTKB|Q59TZ9	446	ZSP12 "Potential Auxin Efflux	0.501	0.304	0.284	6.3e-05

TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
 Identities = 110/154 (71%), Positives = 133/154 (86%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 177
             I+GF+FGA  WLRNLIIG++APLRVIQDS+++LG+GTIPCITLILGGNLIQGLRSS +K 
Sbjct:   242 ILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLILGGNLIQGLRSSAVKK 301

Query:   178 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLF 237
              +I+ V+ VRYI LP +GV VV+ A  LG+LP DPL+ YVLM+QF LPPAMNI TM QLF
Sbjct:   302 SVIVGVIIVRYILLPVVGVGVVQLAGNLGYLPPDPLFRYVLMLQFALPPAMNISTMAQLF 361

Query:   238 DVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
             DVAQ+ECSV+FLWTYLVA+LALT WS +++ ILS
Sbjct:   362 DVAQDECSVIFLWTYLVASLALTVWSTIFLSILS 395

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 116/217 (53%), Positives = 159/217 (73%)

Query:    57 DDQEDVSVLVASTKSSSDPECQII-VPQASHLQTRKES--FWKRSXXXXXXXXXXXXXXX 113
             ++ E +++  +++   +D +  ++  P+    +  KE   FW++                
Sbjct:   179 EESEKIAIKSSNSDLEADHKTHLLGAPEDKENKVVKEKTGFWRKGVDFLHEILEELLAPP 238

Query:   114 XXXXIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSS 173
                 I+GFIFGAV WLRNLIIGD APLR++Q + ++LGDGTIPC+T+ILGGNLIQGLRSS
Sbjct:   239 TLGAIIGFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTIILGGNLIQGLRSS 298

Query:   174 TLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM 233
              +KP++++ +VCVRYIA+P IG+ +V  AA LGFLP+DPL+ YVLM+QFTLPPAMNIGTM
Sbjct:   299 AVKPMVVLGIVCVRYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQFTLPPAMNIGTM 358

Query:   234 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 270
             TQL++VAQ+ECSVL LWTYLVA LALT WS +++ +L
Sbjct:   359 TQLYNVAQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 76/154 (49%), Positives = 113/154 (73%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 177
             ++  + G +  LR LIIG  APLRV+QDS+ ++GDG +P +T+I+GGNL++GLRSS +K 
Sbjct:   237 MIALVIGLITPLRKLIIGTEAPLRVLQDSVTLVGDGAVPAMTMIIGGNLLKGLRSSGMKM 296

Query:   178 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLF 237
               II V+  RY+ LP  GV +V+ A  L  + S+PLY +VL++Q+ +PPAMN+GT+TQLF
Sbjct:   297 SSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGTITQLF 356

Query:   238 DVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
                + ECSV+ LWTY +A++ALT W   +MW+++
Sbjct:   357 GTGESECSVIMLWTYSLASIALTVWPTFFMWLVA 390

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 82/159 (51%), Positives = 112/159 (70%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLR-----S 172
             I+  + G +  LRNLIIG  AP RVIQDS+ +LGDG IP +TLILGGNL++G+R     S
Sbjct:   257 IIALVIGLITPLRNLIIGTVAPFRVIQDSLTLLGDGAIPAMTLILGGNLLKGMRRSEVRS 316

Query:   173 STLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGT 232
             S +K   II V+  RYI LP  GV +V+ A  L  + S+PLY +VL++Q+ +PPAMN+GT
Sbjct:   317 SEMKNSCIIGVLVARYILLPVSGVLLVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGT 376

Query:   233 MTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWILS 271
              TQLF   + ECSV+ LWTY +AA++LT W   +MW+++
Sbjct:   377 KTQLFGAGESECSVIMLWTYSLAAVSLTVWPTFFMWLVT 415

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
 Identities = 60/154 (38%), Positives = 91/154 (59%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 177
             I+  I GA+ + + LI  + APL    DS  ILGD  IPCI L LGGNLI G  SS L  
Sbjct:   278 ILAMILGAIPFTKKLIFTNGAPLFFFTDSCMILGDAMIPCILLALGGNLINGPGSSKLGF 337

Query:   178 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDP-LYHYVLMVQFTLPPAMNIGTMTQL 236
                 A++  R + +P +G+ +V  A  LGFLP+D  ++ +VL++Q T+P ++  G +  L
Sbjct:   338 KTTAAIIIGRLVLVPPVGLGIVTVADKLGFLPADDKMFRFVLLLQHTMPTSVLSGAVANL 397

Query:   237 FDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 270
                 +E  +VLF W ++ A  ++ GW ++Y+ IL
Sbjct:   398 RGCGRESAAVLF-WVHIFAIFSMAGWMVLYINIL 430

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 8.3e-22, P = 8.3e-22
 Identities = 51/150 (34%), Positives = 88/150 (58%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKP 177
             ++  I G+V  L++++ G  APL  I DS+ I+G   +P + L+LGG L +G   STL  
Sbjct:   295 LLAIIIGSVPQLKSVVFGYDAPLSFITDSLNIMGSAMVPSVMLVLGGMLSEGPNESTLGL 354

Query:   178 LIIIAVVCVRYIALPFIGVWVVKAAAALGFLPS-DPLYHYVLMVQFTLPPAMNIGTMTQL 236
                I +   R + LP +G+ +V +A  LG + S DP++ +VL++Q++ P A+ +G +  L
Sbjct:   355 RTTIGISVARLLVLPLVGIGIVMSADKLGLISSADPMFKFVLLLQYSTPSAILLGAIASL 414

Query:   237 FDVAQEECSVLFLWTYLVAALALTGWSMVY 266
                A  E S L  W ++ A L+LT + +++
Sbjct:   415 RGYAVREASALLFWQHIFALLSLTFYIVIF 444

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0005962 orf19.6117 [Candida albicans (taxid:5476)]

 Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 173
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYP---SN 336

Query:   174 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 222
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   223 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 260
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q59RR6 ZSP11 "Potential Auxin Efflux Carrier protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 173
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYP---SN 336

Query:   174 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 222
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   223 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 260
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

CGD|CAL0001802 orf19.733 [Candida albicans (taxid:5476)]

 Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 173
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYL---SN 336

Query:   174 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 222
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   223 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 260
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q59TZ9 ZSP12 "Potential Auxin Efflux Carrier protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 45/158 (28%), Positives = 75/158 (47%)

Query:   118 IVGFIFGAVVWLRNLIIGDSAPLRVIQDS----IEILGDGTIPCITLILGGNLIQGLRSS 173
             +V  I  ++ +L+NLI  DS    ++ ++    I  LG  +IP I ++LG NL     S+
Sbjct:   281 LVAIIVASIPYLKNLIF-DSEQNSIVYNTFTKAITTLGGVSIPLILIVLGSNLYL---SN 336

Query:   174 TLKP------LIIIAVVCVRYIA-----LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF 222
              + P       I+   +  R I      LP I + V    A++     DP++  V  +  
Sbjct:   337 DIPPPSKHYNRILFGSLLSRMILPSAVLLPIIALCVKYIKASI---LDDPIFLIVAFILT 393

Query:   223 TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT 260
               PPA+ +  +TQL +V Q+E S +  W Y+V  +  T
Sbjct:   394 VSPPAIQLSQITQLNNVYQKEMSGVLFWGYVVLVVPTT 431


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      271       252   0.00082  114 3  11 22  0.39    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  192 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.09u 0.09s 19.18t   Elapsed:  00:00:02
  Total cpu time:  19.10u 0.09s 19.19t   Elapsed:  00:00:02
  Start:  Thu May  9 16:18:45 2013   End:  Thu May  9 16:18:47 2013

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_V000390 hypothetical protein (397 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	271
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	7e-33
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	5e-08

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  122 bits (307), Expect = 7e-33
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 11/159 (6%)

Query: 105 LLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGG 164
           LL+ +L PPT A+++G I G V +L  LI         IQDSI ILGD  IP     LG 
Sbjct: 174 LLKLILNPPTYASLLGLILGLVGFLLPLIFP-----EFIQDSISILGDAAIPMALFSLGL 228

Query: 165 NLIQGLRSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTL 224
            L  G   S+L        + +R I +P + + +V        L    L   V +++  L
Sbjct: 229 TLALGKLKSSLGAATATIHLILRLILMPLVMLGIVLLLG----LRGLTL--LVAILEAAL 282

Query: 225 PPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWS 263
           PPA+ +G + QL++V +EE S +  WT L+A L L  W 
Sbjct: 283 PPAIVLGVIAQLYNVDEEEASTVVFWTTLLALLTLPLWI 321

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 16/159 (10%)

Query: 112 PPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLR 171
           P  +A I+G +   +           +    +  ++++L     P   + LG +L   L+
Sbjct: 169 PLIIALILGLLLNLLGI---------SLPAPLDTAVDLLASAASPLALIALGLSLAF-LK 218

Query: 172 SSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIG 231
               KP II+  + ++ +  P +      A      L    L   VL++   +P A+N  
Sbjct: 219 LKGSKPPIILIALSLKLLLAPLV------ALLVAKLLGLSGLALQVLVLLSAMPTAVNAY 272

Query: 232 TMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWIL 270
            + + +       +   L + L++ L L    ++ +  L
Sbjct: 273 VLARQYGGDPRLAASTILLSTLLSLLTLPLLILLLLRSL 311

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	271
KOG2722	408	consensus Predicted membrane protein [Function unk	100.0
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	99.95
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.87
PRK09903	314	putative transporter YfdV; Provisional	99.86
COG0679	311	Predicted permeases [General function prediction o	99.79
TIGR00841	286	bass bile acid transporter. Functionally character	98.93
PF01758	187	SBF: Sodium Bile acid symporter family; InterPro:	98.36
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	98.31
COG0385	319	Predicted Na+-dependent transporter [General funct	98.07
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	97.74
COG0798	342	ACR3 Arsenite efflux pump ACR3 and related permeas	96.45
KOG2718	371	consensus Na+-bile acid cotransporter [Inorganic i	86.35
PF04172	215	LrgB: LrgB-like family ; InterPro: IPR007300 The t	83.07
PRK10711	231	hypothetical protein; Provisional	80.69

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.8e-48  Score=358.45  Aligned_cols=169  Identities=54%  Similarity=1.038  Sum_probs=165.0

Q ss_pred             HHHHHHhcChhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHHHH
Q 024175          103 HQLLEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIA  182 (271)
Q Consensus       103 ~~~lk~l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i~~  182 (271)
                      +..+|++++|+++|+++|+++|++||+|+++|++++|+++++|+++++|++++|++++++|+||.++++++..+.+.+++
T Consensus       239 ~~~L~~i~~Pptia~iiA~vigai~pLr~lifg~~apl~~itdsv~llG~~~IP~illvLGgnL~~g~~ss~~~~~~iig  318 (408)
T KOG2722|consen  239 KVILKEIFAPPTIAAIIALVIGAIPPLRRLIFGEDAPLRVITDSVTLLGDGAIPCILLVLGGNLIQGLRSSALKTSVIIG  318 (408)
T ss_pred             HhhHHHhcCchHHHHHHHHHHhcchHHHHHhhccCchHHHHHHHHHHhccccchhhhhhhccccccCchhcccCceEEEE
Confidence            45589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCC-CChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHH
Q 024175          183 VVCVRYIALPFIGVWVVKAAAALGFLP-SDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTG  261 (271)
Q Consensus       183 iv~vRlillPli~~~iv~~~~~~g~l~-~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlpl  261 (271)
                      +++.||+++|+++++++..++|+|+++ +||+|++|+++|+++|||+|.+.+||++|.+|+|||.+++|+|+++.+++++
T Consensus       319 iii~R~illP~~gl~iv~~A~kl~~ls~~DPlF~~VllLq~~~PpAi~lg~itqL~g~~e~Ecs~il~W~y~va~l~ltv  398 (408)
T KOG2722|consen  319 IIIGRYILLPLVGLGIVRLADKLGLLSTDDPLFQFVLLLQYASPPAINLGTITQLNGVAERECSVILFWTYAVASLSLTV  398 (408)
T ss_pred             EEEeeeeccchhhHHHHHHHHHhCcCCCCCchhhhhhhhhhcCCchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhHHH
Confidence            999999999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhC
Q 024175          262 WSMVYMWILS  271 (271)
Q Consensus       262 w~~lf~~l~~  271 (271)
                      |.++|+|++.
T Consensus       399 w~~~f~~lv~  408 (408)
T KOG2722|consen  399 WSVFFLWLVV  408 (408)
T ss_pred             HHHHHHHHhC
Confidence            9999999973

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=99.95  E-value=4.3e-27  Score=222.48  Aligned_cols=157  Identities=32%  Similarity=0.489  Sum_probs=137.0

Q ss_pred             hhhHHHHHHH-HHHhcChhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhcccccccCC
Q 024175           96 KRSLEFLHQL-LEELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSST  174 (271)
Q Consensus        96 ~~~~~~~~~~-lk~l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~  174 (271)
                      ++.++...+. +|.++||+++|.++|++++++|+.+++++.     .++.++++++|++++|++|+++|++|++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~nP~~~a~~lgli~~~~~~~~~~~~~-----~~i~~~~~~lg~~~~pl~l~~lG~~l~~~~~~~~  302 (385)
T PF03547_consen  228 NSTRKKLKKSILKLFKNPPLIAIILGLIIGLIPPLRPLFFP-----SFITDSLSYLGAAAVPLALFVLGASLARGPRKSA  302 (385)
T ss_pred             hhHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcccchH-----hHHHHHHHHHHhhhHHHHHHHHHHHHhcCCcccc
Confidence            3444443334 566899999999999999999987765444     7999999999999999999999999998766666


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHH
Q 024175          175 LKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLV  254 (271)
Q Consensus       175 ~~~~~i~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syll  254 (271)
                      .+.+.....+++|++++|++++++++++      ..|+....++++++|+|+|++..++|++||.+++++|..++|+|++
T Consensus       303 ~~~~~~~~~~~~rlii~P~i~~~~~~~~------~l~~~~~~~~~~~~~~P~a~~~~~~a~~~~~~~~~~s~~~~~~~~~  376 (385)
T PF03547_consen  303 LGWKPSIIAVLVRLIILPLIGIGIVFLL------GLDGDMARVLILQAAMPTAINSFVIASLYGLDEEEASSIVFWSTLL  376 (385)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHHhccCCchHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            7777777789999999999999998754      2467788999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 024175          255 AALALTGWS  263 (271)
Q Consensus       255 Sivtlplw~  263 (271)
                      +++++|+|+
T Consensus       377 ~~~~~~~~~  385 (385)
T PF03547_consen  377 SIPTLPLWI  385 (385)
T ss_pred             HHHHHHHHC
Confidence            999999995

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.87  E-value=3.2e-21  Score=179.63  Aligned_cols=146  Identities=21%  Similarity=0.254  Sum_probs=127.7

Q ss_pred             HHHHHH-hcChhHHHHHHHHHHHhhhhhhHhhhcCCCch-hhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHH
Q 024175          103 HQLLEE-LLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPL-RVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLII  180 (271)
Q Consensus       103 ~~~lk~-l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL-~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i  180 (271)
                      ++.+|+ ++||+++|.++|+++..+++          ++ .++.++++++|++++|++|+++|+.+...  +.+.+.+..
T Consensus       173 ~~~~~~~~~nP~iia~i~Gl~~~~~~i----------~lP~~l~~~l~~lg~~~~plaLl~lG~~l~~~--~~~~~~~~~  240 (321)
T TIGR00946       173 IFVWKKLIKFPPLWAPLLSVILSLVGF----------KMPGLILKSISILSGATTPMALFSLGLALSPR--KIKLGVRDA  240 (321)
T ss_pred             HHHHHHHHhCCChHHHHHHHHHHHHhh----------cCcHHHHHHHHHHHHHHHHHHHHHHHHhhChh--hhccChHHH
Confidence            344555 57999999999999999983          33 79999999999999999999999999753  233445778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHH
Q 024175          181 IAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALT  260 (271)
Q Consensus       181 ~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlp  260 (271)
                      ...+++|+++.|++++++.+.      ++.|+....++++++|||+|.+..++|++||.|++++|+.+++||++|++|+|
T Consensus       241 ~~~~~~klil~P~i~~~~~~~------~~l~~~~~~~~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sT~ls~~tlp  314 (321)
T TIGR00946       241 ILALIVRFLVQPAVMAGISKL------IGLRGLELSVAILQAALPGGAVAAVLATEYEVDVELASTAVTLSTVLSLISLP  314 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------hCCChHHHHHHHHHHcCChhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999887764      34578889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 024175          261 GWSMVY  266 (271)
Q Consensus       261 lw~~lf  266 (271)
                      +|+.++
T Consensus       315 ~~~~l~  320 (321)
T TIGR00946       315 LFIILL  320 (321)
T ss_pred             HHHHHh
Confidence            999864

>PRK09903 putative transporter YfdV; Provisional

Probab=99.86  E-value=1.4e-20  Score=175.35  Aligned_cols=140  Identities=14%  Similarity=0.127  Sum_probs=122.9

Q ss_pred             HhcChhHHHHHHHHHHHhhhhhhHhhhcCCCch-hhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHHHHHHHH
Q 024175          108 ELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPL-RVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCV  186 (271)
Q Consensus       108 ~l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL-~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i~~iv~v  186 (271)
                      .++||+++|.++|+++..++          .++ .++.++++++|++++|++|+.+|++|++...+  . .+..+...+.
T Consensus       170 ~~~nP~iia~~~gl~~~l~~----------i~lP~~i~~~l~~lg~~~~PlaL~~iG~~L~~~~~~--~-~~~~~~~~~~  236 (314)
T PRK09903        170 AAKEPVVWAPVLATILVLVG----------VKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFE--F-SAEIAYNTFL  236 (314)
T ss_pred             HHhchHHHHHHHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--c-cHHHHHHHHH
Confidence            46899999999999998876          344 89999999999999999999999999975322  2 2456788899


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          187 RYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVY  266 (271)
Q Consensus       187 RlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~~lf  266 (271)
                      |+++.|++.+.+...      .+.|+....++++++|||+|++..++|++||.|++.++..++.||++|++|+|+|++++
T Consensus       237 Kli~~P~i~~~~~~~------~~l~~~~~~v~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sTlls~iTlpl~~~l~  310 (314)
T PRK09903        237 KLILMPLALLLVGMA------CHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVS  310 (314)
T ss_pred             HHHHHHHHHHHHHHH------cCCCcHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998876653      34578889999999999999999999999999999999999999999999999999974

>COG0679 Predicted permeases [General function prediction only]

Probab=99.79  E-value=3.9e-18  Score=159.14  Aligned_cols=144  Identities=21%  Similarity=0.326  Sum_probs=126.3

Q ss_pred             HhcChhHHHHHHHHHHHhhhhhhHhhhcCCCch-hhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHHHHHHHH
Q 024175          108 ELLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPL-RVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCV  186 (271)
Q Consensus       108 ~l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL-~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i~~iv~v  186 (271)
                      -++||+++|.++|+++...++          ++ .++.++++++|++++|++|+++|.+|+. .+.++.+.+.++.....
T Consensus       165 ~~~nP~i~a~i~g~~~~~~~i----------~lP~~~~~~~~~l~~a~~pl~li~lG~~L~~-~~~~~~~~~~~~~~~~~  233 (311)
T COG0679         165 LLTNPLIIALILGLLLNLLGI----------SLPAPLDTAVDLLASAASPLALIALGLSLAF-LKLKGSKPPIILIALSL  233 (311)
T ss_pred             HHhCcHHHHHHHHHHHHHcCC----------CCcHHHHHHHHHHHHhhhhHHHHHHhhhcch-hhhccccchhHHHHHHH
Confidence            368999999999999998873          33 7999999999999999999999999998 23455556677777778


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          187 RYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVY  266 (271)
Q Consensus       187 RlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~~lf  266 (271)
                      |+++.|++.+.+.++      ++.++....+++++.|+|+|+|..++|++||.|++.++..++.||.+|++|+|.|...+
T Consensus       234 kll~~Pl~~~~~~~~------~~l~~~~~~v~vl~~a~P~A~~~~v~a~~~~~~~~laa~~i~ist~ls~~t~p~~~~~l  307 (311)
T COG0679         234 KLLLAPLVALLVAKL------LGLSGLALQVLVLLSAMPTAVNAYVLARQYGGDPRLAASTILLSTLLSLLTLPLLILLL  307 (311)
T ss_pred             HHHHHHHHHHHHHHH------cCCChHHHHHHHHHhhCcHHhHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998774      33466677999999999999999999999999999999999999999999999999887


Q ss_pred             HH
Q 024175          267 MW  268 (271)
Q Consensus       267 ~~  268 (271)
                      .+
T Consensus       308 ~~  309 (311)
T COG0679         308 LR  309 (311)
T ss_pred             hc
Confidence            65

>TIGR00841 bass bile acid transporter

Probab=98.93  E-value=5.9e-09  Score=96.47  Aligned_cols=109  Identities=16%  Similarity=0.115  Sum_probs=93.1

Q ss_pred             hHHHHHHHhHhccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHH
Q 024175          155 IPCITLILGGNLIQGLRS-STLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM  233 (271)
Q Consensus       155 iPl~lliLG~~L~~~~~~-~~~~~~~i~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~  233 (271)
                      ..++|+.+|.++.....+ ...+++......+.|++++|++++.+.+.      ++.||.+...+++.+|+|++.++.++
T Consensus        14 l~~~m~~~G~~l~~~~~~~~~~~p~~~~~~~~~~~vi~Plla~~l~~~------~~l~~~~~~glvL~~~~P~~~~s~v~   87 (286)
T TIGR00841        14 LFLIMFSMGCTLEFEDFKGHLRKPWGVIIGLLAQYGIMPLTGFLLAKV------FKLPPELAVGVLIVGCCPGGTASNVF   87 (286)
T ss_pred             HHHHHHHccCCCcHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHheeeCCCchHHHHH
Confidence            677899999999864322 22334567778889999999999988764      24688999999999999999999999


Q ss_pred             HhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          234 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMWI  269 (271)
Q Consensus       234 Aq~~g~~~~~~S~il~~syllSivtlplw~~lf~~l  269 (271)
                      ++++|+|.+.++.++..++++|++++|+|..++...
T Consensus        88 t~~~~gn~~la~~~~~~stlls~vt~Pl~l~~~~~~  123 (286)
T TIGR00841        88 TYLLKGDMALSISMTTCSTLLALGMMPLLLYIYAKM  123 (286)
T ss_pred             HHHhCCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999988653

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes

Probab=98.36  E-value=5.7e-06  Score=71.73  Aligned_cols=109  Identities=15%  Similarity=0.151  Sum_probs=83.4

Q ss_pred             hHHHHHHHhHhccccc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHH
Q 024175          155 IPCITLILGGNLIQGL-RSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTM  233 (271)
Q Consensus       155 iPl~lliLG~~L~~~~-~~~~~~~~~i~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~  233 (271)
                      +-++|+.+|.++.... ++...+++.+....+..++++|++++++.+.+     ++.+|.+..-+++.++.|.+..+..+
T Consensus         4 l~~~mf~~gl~~~~~~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~~-----~~~~~~~~~Gl~l~~~~P~~~~s~~~   78 (187)
T PF01758_consen    4 LFLMMFSMGLSLTFEDLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWLL-----LPLSPALALGLLLVAACPGGPASNVF   78 (187)
T ss_dssp             HHHHHHHHHHC--GGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-HH-----TT--HHHHHHHHHHHHS-B-THHHHH
T ss_pred             hhHHHHHhhhcccHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCHHHHHHHHHHhcCCcHHHHHHH
Confidence            4567888888887532 22233456777788999999999999998432     45788899999999999999999999


Q ss_pred             HhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          234 TQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMW  268 (271)
Q Consensus       234 Aq~~g~~~~~~S~il~~syllSivtlplw~~lf~~  268 (271)
                      +...|+|...+..+..++++++++.+|+|..++..
T Consensus        79 t~l~~Gd~~ls~~lt~istll~~~~~P~~~~l~~~  113 (187)
T PF01758_consen   79 TYLAGGDVALSVSLTLISTLLAPFLMPLLLYLLSG  113 (187)
T ss_dssp             HHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHhCCCcccccceeeHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999988753

They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.

>TIGR00832 acr3 arsenical-resistance protein

Probab=98.31  E-value=2.4e-05  Score=74.04  Aligned_cols=141  Identities=15%  Similarity=0.030  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhH------HHHHHHhHhcccc-cccCCCchhHHHHHH
Q 024175          112 PPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIP------CITLILGGNLIQG-LRSSTLKPLIIIAVV  184 (271)
Q Consensus       112 P~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiP------l~lliLG~~L~~~-~~~~~~~~~~i~~iv  184 (271)
                      ..+.++++|++++..-|         .........  .+.+...|      .+|+.+|.++... .++...++|.+....
T Consensus        11 ~~~~~~i~~~~~g~~~P---------~~~~~~~~~--~~~~~~~~~~~~l~~mmf~mgl~L~~~df~~~~~~pk~~~~~~   79 (328)
T TIGR00832        11 WIFLAIAAGVGLGVLFP---------SVFQALAAL--EVATVSIPIAIGLILMMYPPLAKVDYSALGDVFKDPKGLILSL   79 (328)
T ss_pred             HHHHHHHHHHHHHHhcc---------ccHHHHHHH--HhhhhHHHHHHHHHHHHHHhhhcCCHHHHHHHHcCchHHHHHH
Confidence            44677778888887643         111122111  22334555      3677777887643 223334557788889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 024175          185 CVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSM  264 (271)
Q Consensus       185 ~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~~  264 (271)
                      +.-++++|++++++.+.+     ++.+|.+..=+++.+|.|.+..+..++...++|...+-.+...+++++++++|.+..
T Consensus        80 ~~qfvi~Plla~~l~~l~-----~~~~p~l~~GliLv~~~Pgg~~S~v~T~lAkGnvalsv~lt~~stLl~~~~~P~l~~  154 (328)
T TIGR00832        80 FINWIIGPFLMFLLAWLF-----LRDLFEYIAGLILLGLARCIAMVFVWNQLAKGDPEYTLVLVAVNSLFQVFLYAPLAW  154 (328)
T ss_pred             HHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHhcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998753     356778889999999999999999999999999999988889999999999999998


Q ss_pred             HHHH
Q 024175          265 VYMW  268 (271)
Q Consensus       265 lf~~  268 (271)
                      +|..
T Consensus       155 ll~~  158 (328)
T TIGR00832       155 LLLG  158 (328)
T ss_pred             HHHh
Confidence            8864

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=98.07  E-value=6.4e-05  Score=70.87  Aligned_cols=110  Identities=13%  Similarity=0.115  Sum_probs=91.6

Q ss_pred             chhHHHHHHHhHhccccc-ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHH
Q 024175          153 GTIPCITLILGGNLIQGL-RSSTLKPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIG  231 (271)
Q Consensus       153 aaiPl~lliLG~~L~~~~-~~~~~~~~~i~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~  231 (271)
                      ..+-++|+..|..|.... +..-.+++....+.+.-++++|++++++.+.      ++.||....=+++.++.|.++.+-
T Consensus        42 ~~l~lImf~mGl~Ls~~d~~~~~~~p~~vligl~~qfvlmPlla~~~~~~------~~l~~~l~~Gl~ll~~~Pggv~S~  115 (319)
T COG0385          42 IALALIMFGMGLTLSREDFLAGLKHPRLVLIGLAAQFVLMPLLALLLAKL------FPLPPELAVGLLLLGCCPGGVASN  115 (319)
T ss_pred             HHHHHHHHhcCCCCCHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHhHHheeeCCCchhHH
Confidence            345567777788887532 2344566778888999999999999999975      456888888889999999999999


Q ss_pred             HHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          232 TMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYMW  268 (271)
Q Consensus       232 i~Aq~~g~~~~~~S~il~~syllSivtlplw~~lf~~  268 (271)
                      .++..+++|...+=.....+++++++..|++..+|+.
T Consensus       116 ~~t~lAkGnValsV~~tsvStll~~f~tPllv~l~~~  152 (319)
T COG0385         116 AMTYLAKGNVALSVCSTSVSTLLGPFLTPLLVGLLAG  152 (319)
T ss_pred             HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999888888889999999999999998763

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=97.74  E-value=0.00027  Score=66.46  Aligned_cols=144  Identities=15%  Similarity=0.140  Sum_probs=102.6

Q ss_pred             hhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhccccc-ccCCCchhHHHHHHHHHHHH
Q 024175          112 PPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGL-RSSTLKPLIIIAVVCVRYIA  190 (271)
Q Consensus       112 P~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~-~~~~~~~~~i~~iv~vRlil  190 (271)
                      +-+++.+++.+++..-|-.    +.  ....+.  .+......+.+..++-|.+|.... ++...+++........-+++
T Consensus         2 ~fl~~l~~ai~la~~~P~~----g~--~~~~~~--~~~~~~~~v~~iFf~~Gl~L~~~~l~~~~~~~~~~l~~~~~~fvl   73 (313)
T PF13593_consen    2 WFLLGLLLAILLAYLFPAP----GA--AGGVIK--PEYVIKYGVALIFFISGLSLPTEELKAALRNWRLHLFVQAFNFVL   73 (313)
T ss_pred             chHHHHHHHHHHHHHcCcc----cc--cCCccc--hhhhHHHHHHHHHHHHcCCCCHHHHHHHHhcchHHHHHHHHHHHH
Confidence            4456667777776653311    10  001221  023334458888999999887532 22334456677778889999


Q ss_pred             HHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHH-HHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          191 LPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIG-TMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYM  267 (271)
Q Consensus       191 lPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~-i~Aq~~g~~~~~~S~il~~syllSivtlplw~~lf~  267 (271)
                      .|++++++..+...  +  .++.+..=+++.+|+|+.+.+. .++++-|+|+..+-.....+.++.++..|+|+.+++
T Consensus        74 ~Pll~~~~~~l~~~--~--~~~~l~~Gl~~~~~lPtTv~S~v~~T~~AgGN~a~Al~~~~~snllgv~ltP~ll~l~l  147 (313)
T PF13593_consen   74 FPLLGFGLSRLFPA--F--LPPELALGLLILACLPTTVSSSVVLTRLAGGNVALALFNAVLSNLLGVFLTPLLLLLLL  147 (313)
T ss_pred             HHHHHHHHHHHhhc--c--CCHHHHHHHHHHhhCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhhhHhHHHHHHHHHh
Confidence            99999998876432  2  4667888899999999997765 699999999888888888899999999999998886

>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]

Probab=96.45  E-value=0.16  Score=48.47  Aligned_cols=139  Identities=17%  Similarity=0.168  Sum_probs=104.1

Q ss_pred             hHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHH--HhcCchhHHHHHHHhHh---ccccc----ccCCCchhHHHHH
Q 024175          113 PTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIE--ILGDGTIPCITLILGGN---LIQGL----RSSTLKPLIIIAV  183 (271)
Q Consensus       113 ~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~--~lG~aaiPl~lliLG~~---L~~~~----~~~~~~~~~i~~i  183 (271)
                      .+++.++|+.+|..-|             -+.+.+.  ..|+..+|.....+=+-   +.+.+    +.-.-++|.+...
T Consensus        20 v~l~i~~Gi~lG~~~p-------------~~~~~l~~~~~~~~sipiai~L~~MmYP~m~ki~~~~~~~v~k~~k~L~ls   86 (342)
T COG0798          20 VFLAIAIGILLGVHFP-------------GLAQLLGKLEFGGVSIPIAIGLILMMYPPMLKIDFEELKNVFKDPKPLILS   86 (342)
T ss_pred             HHHHHHHHHHHHhccc-------------chhhhcccceeCceehhHHHHHHHHHhHHHhcCCHHHHHHHHhcchHHHHH
Confidence            4778888888877642             1333333  56777787765433221   12211    1122235678888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 024175          184 VCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWS  263 (271)
Q Consensus       184 v~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~  263 (271)
                      .+.-.++-|++.+.+.+++     +++-|.++.=+++....|+-.....-+++-++|.+.++..+.+..++.++..+.+.
T Consensus        87 L~~Nwii~P~lm~~la~~f-----l~~~pey~~GlILlglApC~aMVivw~~La~Gd~~~tlv~Va~n~l~qiv~y~~~~  161 (342)
T COG0798          87 LFVNWIIGPLLMFALAWFF-----LPDEPEYRAGLILLGLAPCIAMVIVWSGLAKGDRELTLVLVAFNSLLQIVLYAPLG  161 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHhhhhHHHHHHHHhhccCcHhhhhHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999874     45677888888888889998888999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 024175          264 MVYMWI  269 (271)
Q Consensus       264 ~lf~~l  269 (271)
                      .+|+..
T Consensus       162 ~~~l~v  167 (342)
T COG0798         162 KFFLGV  167 (342)
T ss_pred             HHHHhh
Confidence            998765

>KOG2718 consensus Na+-bile acid cotransporter [Inorganic ion transport and metabolism]

Probab=86.35  E-value=0.77  Score=44.52  Aligned_cols=106  Identities=15%  Similarity=0.151  Sum_probs=70.1

Q ss_pred             HHHHHHHhHhcccccccCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHH
Q 024175          156 PCITLILGGNLIQGLRSSTL-KPLIIIAVVCVRYIALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMT  234 (271)
Q Consensus       156 Pl~lliLG~~L~~~~~~~~~-~~~~i~~iv~vRlillPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~A  234 (271)
                      -..++.+|.++.-....... .+..+....+.++++.|+.++...+.+    .+|.+.  ...+++.+|.+|+.-.....
T Consensus       120 ~~~~ls~g~~~~~~~~~~~~~rP~~~~lG~v~q~~i~pl~~f~~~~~~----~lP~~~--~ag~~Lvtc~~p~g~~~~~~  193 (371)
T KOG2718|consen  120 LSNMLSFGIKLDMDLFAGMIKRPTPLALGFVPQYLIMPLLGFLLSKVL----LLPAAL--AAGLLLVTCVSPGGGGNYLT  193 (371)
T ss_pred             HHHHHHHhcCccHHHHhhHhhCCcceeehHHHHHHHHHHHHHhhhhHh----hCCccc--cceeEEEEeccCCcchhhhe
Confidence            35567778777643322222 223344455569999999999876532    234322  14567778888888777777


Q ss_pred             hHc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          235 QLF-DVAQEECSVLFLWTYLVAALALTGWSMVYM  267 (271)
Q Consensus       235 q~~-g~~~~~~S~il~~syllSivtlplw~~lf~  267 (271)
                      ..+ +.|....-.+...+++.+++..|+|...+.
T Consensus       194 ~~~~~g~v~lsilmT~~stv~avi~~pl~s~~l~  227 (371)
T KOG2718|consen  194 SKRLPGDVTLSILMTTISTVLAVILTPLLSILLG  227 (371)
T ss_pred             eecCCcchhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            777 666656666666789999999999988763

>PF04172 LrgB: LrgB-like family ; InterPro: IPR007300 The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control murein hydrolase activity and penicillin tolerance []

Probab=83.07  E-value=33  Score=30.85  Aligned_cols=136  Identities=20%  Similarity=0.155  Sum_probs=76.7

Q ss_pred             hcChhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHHHHHHHHHH
Q 024175          109 LLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRY  188 (271)
Q Consensus       109 l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i~~iv~vRl  188 (271)
                      ++||.+++.++-..+-..-         +.|..--.+.-+++...--|. +..+|.-|++..+.-+-+++.+...+++=-
T Consensus        19 ~l~P~l~a~~~ii~~L~~~---------~i~y~~Y~~gg~~l~~lLgPa-tVALAvPLY~~~~~l~~~~~~il~~~~~g~   88 (215)
T PF04172_consen   19 FLNPLLIAIVLIIAFLLLT---------GIPYEDYMQGGDILSFLLGPA-TVALAVPLYRQRRLLKKNWIPILVGVLVGS   88 (215)
T ss_pred             cccHHHHHHHHHHHHHHHH---------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999887755443332         245544444555555554554 668888888754333333444444444443


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhh-ccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 024175          189 IALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQF-TLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWS  263 (271)
Q Consensus       189 illPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~-a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~  263 (271)
                      ++--...+.+.+.   +|   .|+.....+.--+ .+|-|+.   ++++.|+++...+.++..|=++-.+.=|.++
T Consensus        89 ~~~~~~~~~l~~~---lg---l~~~~~~Sl~pkSVTtpiAi~---is~~iGG~~sLta~~VvitGi~Ga~~g~~ll  155 (215)
T PF04172_consen   89 LVSIFSAVLLARL---LG---LSPEIILSLAPKSVTTPIAIE---ISEQIGGIPSLTAVFVVITGILGAVLGPPLL  155 (215)
T ss_pred             HHHHHHHHHHHHH---HC---cCHHHHHHHHHHHhhHHHHHH---HHHHhCChHHHHHHHHHHHhhHHHHhHHHHH
Confidence            4333333333332   34   3554444444433 3666654   6788899998888888877666555445443

>PRK10711 hypothetical protein; Provisional

Probab=80.69  E-value=45  Score=30.38  Aligned_cols=136  Identities=18%  Similarity=0.162  Sum_probs=79.7

Q ss_pred             hcChhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhcccccccCCCchhHHHHHHHHHH
Q 024175          109 LLAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRSSTLKPLIIIAVVCVRY  188 (271)
Q Consensus       109 l~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~~~~~~~~i~~iv~vRl  188 (271)
                      ++||.+++.++-..+-..-         +.|..--++.-+++...--|. +..++.-|++..+.-+.+++.+...+++=-
T Consensus        30 ~l~Pll~s~~~ii~~L~~~---------~i~Y~~Y~~g~~~l~~lLgPA-tVALAvPLY~q~~~lk~~~~~I~~~~~vG~   99 (231)
T PRK10711         30 LLNPLLVAMVVIIPFLLLT---------GIPYEHYFKGSEVLNDLLQPA-VVALAFPLYEQLHQIRARWKSIISICFIGS   99 (231)
T ss_pred             cccHHHHHHHHHHHHHHHh---------CCCHHHHHhccHHHHhhhhHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            5799999987665554442         245433344445555555554 347777888754333334445555554444


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhc-cchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 024175          189 IALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFT-LPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWS  263 (271)
Q Consensus       189 illPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a-~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~  263 (271)
                      ++--...+.+.+.   +|   .|+.....++-.+. +|-|+.   +++..|+.++..+.++..|=++-.+--|..+
T Consensus       100 ~v~i~s~~~l~~~---lg---~~~~~~~Sl~pkSVTtPIAm~---is~~iGG~~sLta~~ViitGi~Ga~~g~~ll  166 (231)
T PRK10711        100 VVAMVTGTAVALW---MG---ATPEIAASILPKSVTTPIAMA---VGGSIGGIPAISAVCVIFVGILGAVFGHTLL  166 (231)
T ss_pred             HHHHHHHHHHHHH---HC---cCHHHHHHHhhhhhhHHHHHH---HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444444444442   34   45655555555544 677765   5689999999988888887666555444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	271
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 5e-04
 Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 42/159 (26%)

Query: 37  KEVNKDFDANAQTQLLRGTTDDQEDVSVLVASTKSSSDPECQIIVPQASHLQTRKESFWK 96
            +    F+ + +  LL  TT  ++    L A+T         I +   S   T  E    
Sbjct: 256 AKAWNAFNLSCKI-LL--TTRFKQVTDFLSAAT------TTHISLDHHSMTLTPDEV--- 303

Query: 97  RSL--EFLHQLLEELLAPPTLAAIVGF---IFGAVV------WLRNLIIGDSAPLRVIQD 145
           +SL  ++L    ++L  P  +         I    +      W     +       +I+ 
Sbjct: 304 KSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361

Query: 146 SIEILG----------------DGTIPCITL-ILGGNLI 167
           S+ +L                    IP I L ++  ++I
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	271
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	99.04

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=99.04  E-value=1.5e-09  Score=101.15  Aligned_cols=139  Identities=12%  Similarity=-0.051  Sum_probs=109.0

Q ss_pred             cChhHHHHHHHHHHHhhhhhhHhhhcCCCchhhHHHHHHHhcCchhHHHHHHHhHhccccccc-CCCchhHHHHHHHHHH
Q 024175          110 LAPPTLAAIVGFIFGAVVWLRNLIIGDSAPLRVIQDSIEILGDGTIPCITLILGGNLIQGLRS-STLKPLIIIAVVCVRY  188 (271)
Q Consensus       110 ~nP~iiA~ilGlii~~~~~lr~~l~~~~~pL~~I~~al~~lG~aaiPl~lliLG~~L~~~~~~-~~~~~~~i~~iv~vRl  188 (271)
                      -++..+.+++|.+++.+-|-         ....+    +..-..++.++|+..|.++.....+ ...+++......+.++
T Consensus        17 ~~~~~l~i~~~~~lg~~~P~---------~~~~~----~~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~   83 (332)
T 3zux_A           17 GKTFSLWAALFAAAAFFAPD---------TFKWA----GPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQF   83 (332)
T ss_dssp             HHTHHHHHHHHHHHHHHCGG---------GTGGG----GGGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcch---------hhhhh----HHHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHH
Confidence            35667788888888776431         00111    1122347889999999999864322 2234566677789999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHhhccchHHHHHHHHhHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024175          189 IALPFIGVWVVKAAAALGFLPSDPLYHYVLMVQFTLPPAMNIGTMTQLFDVAQEECSVLFLWTYLVAALALTGWSMVYM  267 (271)
Q Consensus       189 illPli~~~iv~~~~~~g~l~~dpl~~~Vlll~~a~P~A~n~~i~Aq~~g~~~~~~S~il~~syllSivtlplw~~lf~  267 (271)
                      +++|++++++.++      ++.||.+...+++.+|+|++..+.++++++|+|.+.+......+++++++++|+|..++.
T Consensus        84 vi~Pll~~~l~~~------~~l~~~~~~Glil~~~~P~~~~s~v~t~~a~Gd~~la~~~~~~stll~~~~~Pl~~~l~~  156 (332)
T 3zux_A           84 AIMPATAWCLSKL------LNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA  156 (332)
T ss_dssp             HHHHHHHHHHHHH------TTCCHHHHHHHHHHHHSCCCTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH------hCCChHHHHHHHHHhcCCchhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999998874      357899999999999999999999999999999999999999999999999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00