Citrus Sinensis ID: 024264

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MKNDTNSDSSKPKKRRRDEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccEEEEEHHHHHcccccHHHHHHHHHHHcccEEEEEEcccccEEEEEEcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHcccEEEEccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHccccEEEEEcccccEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHccccEEEEEEEEEEcccccHHHHHHHHHHHcccEEEEEEccccccEEEEEcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcHccccccccHHHHHHHccccccccHHHHHHHHHcccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccEEEEEccccEEEEEccc
Coil and Loop (DISEMBL)
mkndtnsdsskpkkrrrdeeieaessssdrtlsleenltfSDTLVALRIMRAqfphidkvsirpfiLQSQLYSSVNDRTQVDRELESLRRERVLRVFKlntgqddhaiMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHvldsklepsvgheELCSLLSIVGKVKDEHISLLINAGIltrqlidpdmywfaipniGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKhlrfspldmRFHLRDligsghlktihtptglVVQISKD
Flexible Loop (DISEMBL)
mkndtnsdsskpkkrrrdeeieaessssdrtlsleenlTFSDTLVALRIMRAQFPHIDKVSIRPFILQsqlyssvndrtqVDREleslrrervlrvfklntgqddhaiMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIgsghlktihtptglvvqiskd
Low Complexity Region (SEG)
MKNDTNSDSSKPKKrrrdeeieaessssdrTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQvdreleslrrervlrvFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD
Disordered region (IsUnstruct)
*************************************LTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQ****
Disordered Region (DISOPRED)
***************************************FSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIEC*************EVFEWFQTHVLDSKLEPSVG*******LSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQIS**
Disordered Region (DISEMBL)
*******************************LSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD
Disordered Region (DISPRO)
***********************************ENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQIS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKNDTNSDSSKPKKRRRDEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
P49842	368	Serine/threonine-protein	yes	no	0.744	0.546	0.289	2e-22
Q9JHN8	254	Serine/threonine-protein	yes	no	0.725	0.771	0.278	3e-18
Q54WC0	391	Serine/threonine-protein	yes	no	0.818	0.565	0.273	1e-14

>sp|P49842|STK19_HUMAN Serine/threonine-protein kinase 19 OS=Homo sapiens GN=STK19 PE=1 SV=2

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 61  SIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQI-E 119
           ++ P +L+SQ+YS V DRT  DR+L+ L+ +  +R+ +L    D H I+F +DY  ++ +
Sbjct: 165 ALPPIVLRSQVYSLVPDRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCD 224

Query: 120 CVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAG 179
           CV+K  + +        + F   VL +  + S   +++          +D  I+ L+NAG
Sbjct: 225 CVLKACDGRPYAG--AVQKFLASVLPACGDLSFQQDQMTQTFGF----RDSEITHLVNAG 278

Query: 180 ILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLEKKHLRFSP 238
           +LT  + D   +W A+P  G  +K   +GR+ ++S + + KY+E++L+ LL ++      
Sbjct: 279 VLT--VRDAGSWWLAVPGAGRFIKYFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVR 336

Query: 239 LDMRFHLRDLIGSGHLKTIHTPTGLVVQISK 269
           L + +H+ DLIG+  +  I T +G ++++ +
Sbjct: 337 LGLTYHVHDLIGAQLVDCISTTSGTLLRLPE 367

Seems to be a protein kinase. In vitro it can phosphorylate casein-alpha on serine and threonine residues and histones on serine residues.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9JHN8|STK19_MOUSE Serine/threonine-protein kinase 19 OS=Mus musculus GN=Stk19 PE=2 SV=2

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 12/208 (5%)

Query: 61  SIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIEC 120
           ++ P  L+SQ+YS V DRT  D +L+ L+    +R+ +L    D H I+F +DY  +   
Sbjct: 55  ALPPIALRSQVYSLVPDRTVADLQLKELQELGEIRIIQLGFDLDAHGIVFTEDYRTR--- 111

Query: 121 VVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGI 180
           V+K  + +        + F   VL +  + S   +++          +D  I+ L+NAG+
Sbjct: 112 VLKACDGRPCAG--AVQKFLASVLPACGDLSFQQDQMTQTYGF----RDPEITQLVNAGV 165

Query: 181 LTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLEKKHLRFSPL 239
           LT +  D   +W A+P  G  +K   +GR+ ++S + + KY+E+ L+ LL ++      L
Sbjct: 166 LTVR--DAGSWWLAVPGAGRFIKCFVKGRQAVLSMVRKAKYRELALSELLGRRAPLAVRL 223

Query: 240 DMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
            + +H+ DLIG+  +  + T +G ++++
Sbjct: 224 GLAYHVHDLIGAQLVDCVPTTSGTLLRL 251

Seems to be a protein kinase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54WC0|STK19_DICDI Serine/threonine-protein kinase 19 homolog OS=Dictyostelium discoideum GN=STK19 PE=3 SV=1

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 42/263 (15%)

Query: 38  LTFSDTLVA-LRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRV 96
           LT  D L++ + +++A++ +I      P +LQS  + S  D    +R ++ L+++  +R+
Sbjct: 130 LTTEDILLSQIELLKAEWDYITYNKSPPLVLQSVYHQSNKDS---ERSIQILKKKGTIRL 186

Query: 97  FKLNTGQDDHAIMFLDDYLNQIECV-------------------VKRMEEKKQVNLEVFE 137
           F++ T  +D+ I+   DY+  IE +                   +K     K   ++   
Sbjct: 187 FQIATSLNDYCIIITTDYIKNIELLKIENTTIPNKIKPETLTNNMKNSSPIKSAPIDTIL 246

Query: 138 WFQTHVLD---SKLEP-----SVGHEELCSLLSIVGKVKDEH------ISLLINAGILTR 183
             ++ +LD    KL P     S+   +L  LLSIV    D+H      I+ L+  G+L +
Sbjct: 247 LKRSEILDLFIKKLIPNFNEVSITRSKLFQLLSIVN---DDHHQQENIITHLVQCGLLLQ 303

Query: 184 QLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRF 243
           +  D   + F++P  G     L +GRKEI+S + R KYKE++   L KK L++S + M+ 
Sbjct: 304 K--DDCTFTFSVPGAGGFFLNLMKGRKEILSNIQRLKYKEILKKDLLKKKLKYSNVQMQL 361

Query: 244 HLRDLIGSGHLKTIHTPTGLVVQ 266
            ++DL+G   +K I T  G +++
Sbjct: 362 LIKDLLGLNKIKIIPTTQGELIR 384

Seems to be a protein kinase.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
225438097	268	PREDICTED: serine/threonine-protein kina	0.966	0.973	0.800	1e-120
255577960	278	Serine/threonine-protein kinase, putativ	1.0	0.971	0.766	1e-117
363814433	264	uncharacterized protein LOC100787443 [Gl	0.951	0.973	0.763	1e-110
297832648	277	hypothetical protein ARALYDRAFT_480877 [	1.0	0.974	0.700	1e-106
449462421	268	PREDICTED: serine/threonine-protein kina	0.962	0.970	0.7	1e-105
79591618	282	uncharacterized protein [Arabidopsis tha	1.0	0.957	0.698	1e-103
224085658	228	predicted protein [Populus trichocarpa]	0.833	0.986	0.769	1e-97
326517794	282	predicted protein [Hordeum vulgare subsp	0.977	0.936	0.651	7e-97
357123000	270	PREDICTED: serine/threonine-protein kina	0.966	0.966	0.661	1e-94
115471945	282	Os07g0458800 [Oryza sativa Japonica Grou	0.888	0.851	0.687	7e-94

>gi|225438097|ref|XP_002277335.1| PREDICTED: serine/threonine-protein kinase 19 [Vitis vinifera] gi|297744163|emb|CBI37133.3| unnamed protein product [Vitis vinifera]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/261 (80%), Positives = 235/261 (90%)

Query: 10  SKPKKRRRDEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQS 69
           S  +KRRRDEE   ES   D  LSLE++LTFSDTLVALRIMRAQFP I+KVS++PFIL+S
Sbjct: 8   STARKRRRDEENVPESEDYDEALSLEQSLTFSDTLVALRIMRAQFPQIEKVSVQPFILRS 67

Query: 70  QLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKK 129
           QLYSSV DRTQVDRELESLRR++VLR+FKLNTGQDDHAIMF+DDYLNQIE V+KRM  KK
Sbjct: 68  QLYSSVKDRTQVDRELESLRRDKVLRIFKLNTGQDDHAIMFMDDYLNQIERVIKRMAAKK 127

Query: 130 QVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPD 189
           Q  L VFEWF+THV+ SKLEPS+ H+ELCSLLS  G VKDEHISLLINAG+LTRQLIDP+
Sbjct: 128 QDELAVFEWFKTHVITSKLEPSIEHQELCSLLSFGGNVKDEHISLLINAGLLTRQLIDPN 187

Query: 190 MYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLI 249
           MYWFAIPNIGS+LKGLSQGRKE++SFLNRR+YKEMMLA LEKK LR SPLDMRFHLRDLI
Sbjct: 188 MYWFAIPNIGSLLKGLSQGRKELLSFLNRRRYKEMMLAPLEKKRLRLSPLDMRFHLRDLI 247

Query: 250 GSGHLKTIHTPTGLVVQISKD 270
           GSGH+KT+HTPTGLVV++SKD
Sbjct: 248 GSGHVKTVHTPTGLVVRVSKD 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577960|ref|XP_002529852.1| Serine/threonine-protein kinase, putative [Ricinus communis] gi|223530680|gb|EEF32553.1| Serine/threonine-protein kinase, putative [Ricinus communis]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/278 (76%), Positives = 244/278 (87%), Gaps = 8/278 (2%)

Query: 1   MKNDTNSDSSKPKKRRRDEEI--------EAESSSSDRTLSLEENLTFSDTLVALRIMRA 52
           M     S SSK KKR RD++         +AE+S  D+TLSLEE+LTFSDTLVALRIMRA
Sbjct: 1   MHQTPESSSSKRKKRLRDDDEEEEEEEEEKAETSDGDQTLSLEESLTFSDTLVALRIMRA 60

Query: 53  QFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLD 112
           QFP IDKVSI+PFIL+SQLYSSV DRTQVDRELESLRRE++LR+FKLNTGQDDHAIMFLD
Sbjct: 61  QFPQIDKVSIQPFILRSQLYSSVKDRTQVDRELESLRREKLLRIFKLNTGQDDHAIMFLD 120

Query: 113 DYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHI 172
           DYL Q++ VVKR+EEKKQ ++ VFEWF+THV+D KLE S+ H+ELCSLLS+ GKVKDEHI
Sbjct: 121 DYLCQVDLVVKRLEEKKQGDVIVFEWFRTHVIDVKLEASIDHQELCSLLSLGGKVKDEHI 180

Query: 173 SLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKK 232
           SLLINAG+LTRQLIDP+MYWFAIPNIGSVLKGLSQGRKE++S ++ R+YKEMMLA LEKK
Sbjct: 181 SLLINAGLLTRQLIDPNMYWFAIPNIGSVLKGLSQGRKELLSLISSRRYKEMMLAPLEKK 240

Query: 233 HLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
            LRFSPLDMRFHLRDLIGSGHLKT+ TPTGLVV++SKD
Sbjct: 241 RLRFSPLDMRFHLRDLIGSGHLKTVSTPTGLVVRVSKD 278

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814433|ref|NP_001242852.1| uncharacterized protein LOC100787443 [Glycine max] gi|255640957|gb|ACU20758.1| unknown [Glycine max]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/262 (76%), Positives = 228/262 (87%), Gaps = 5/262 (1%)

Query: 9   SSKPKKRRRDEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQ 68
           SS+  KRRRDE+ +A ++SS     LE++LTF+DTLVALRIMRAQFPH+ K S+ PFIL+
Sbjct: 8   SSRGTKRRRDEDSDAGNTSS-----LEDDLTFTDTLVALRIMRAQFPHVHKSSVEPFILK 62

Query: 69  SQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEK 128
           SQLYS V DRTQVDRELESLRR++VLRVFKLNTGQDDHAIMFLDDYLNQI+ VVKRMEEK
Sbjct: 63  SQLYSIVKDRTQVDRELESLRRDKVLRVFKLNTGQDDHAIMFLDDYLNQIDHVVKRMEEK 122

Query: 129 KQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDP 188
           K    E F WF+THVLDSKLEP + H+ELCSLLS+ GKVKD HISLLINAGILTRQLIDP
Sbjct: 123 KIGECEAFGWFKTHVLDSKLEPGINHQELCSLLSLGGKVKDSHISLLINAGILTRQLIDP 182

Query: 189 DMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDL 248
           +MYWFAIPNIGS+LKGL QGRKEIIS L+R ++KEMMLA LEKK LR SPLD+RF LRDL
Sbjct: 183 NMYWFAIPNIGSLLKGLVQGRKEIISLLSRHRHKEMMLASLEKKRLRMSPLDIRFLLRDL 242

Query: 249 IGSGHLKTIHTPTGLVVQISKD 270
           IGSGHLKT  TPTGL++++SKD
Sbjct: 243 IGSGHLKTDQTPTGLIIRVSKD 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832648|ref|XP_002884206.1| hypothetical protein ARALYDRAFT_480877 [Arabidopsis lyrata subsp. lyrata] gi|297330046|gb|EFH60465.1| hypothetical protein ARALYDRAFT_480877 [Arabidopsis lyrata subsp. lyrata]

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/277 (70%), Positives = 232/277 (83%), Gaps = 7/277 (2%)

Query: 1   MKNDTNSDSSKPKKRRRDEEIE-------AESSSSDRTLSLEENLTFSDTLVALRIMRAQ 53
           MK  TN +SS  K ++R  E E       + ++  D+ L LE++LTFSDT VALR+MRAQ
Sbjct: 1   MKKRTNPESSASKAKKRRREEEDEEEVGCSHTAIEDQCLPLEDDLTFSDTCVALRMMRAQ 60

Query: 54  FPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDD 113
           FP ID+ S  PFILQSQLYSSVNDRTQVDRELE LRRE+V+RVFKLNTGQDDHAI+FLDD
Sbjct: 61  FPRIDQASTPPFILQSQLYSSVNDRTQVDRELECLRREKVVRVFKLNTGQDDHAIIFLDD 120

Query: 114 YLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHIS 173
           YLNQ++ +VKRMEEK+Q +LEVF+WF+ HVLDSKLEPS+GH EL SLLS+ GKVKD HI+
Sbjct: 121 YLNQVDRIVKRMEEKRQSDLEVFKWFKGHVLDSKLEPSIGHHELFSLLSLGGKVKDAHIT 180

Query: 174 LLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKH 233
           LLINAG+LTRQLIDPDMYWFAIP+IG + KGL QGR E++S L R+++KEM LA LEKK 
Sbjct: 181 LLINAGLLTRQLIDPDMYWFAIPSIGKLWKGLLQGRNELLSLLKRKRHKEMFLAELEKKR 240

Query: 234 LRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
           LRFSPLD+RFH+RDLIGSGHLKT+ T +GL+V+ISKD
Sbjct: 241 LRFSPLDVRFHIRDLIGSGHLKTVQTTSGLIVRISKD 277

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462421|ref|XP_004148939.1| PREDICTED: serine/threonine-protein kinase 19 homolog [Cucumis sativus]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/260 (70%), Positives = 222/260 (85%)

Query: 11  KPKKRRRDEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQ 70
           K KKRRR+ EIE +   +    SLE+ LTF+DTL AL +MRAQFP IDKVSI+PFILQSQ
Sbjct: 9   KAKKRRREAEIEDDGGGNTENFSLEDCLTFNDTLAALHMMRAQFPTIDKVSIQPFILQSQ 68

Query: 71  LYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQ 130
           LYSS+ DRT+VDRELE L+RE+V+RVFKLNTGQDDHAIMFLDDYL QI+ ++ R EE  +
Sbjct: 69  LYSSLKDRTEVDRELECLKREKVVRVFKLNTGQDDHAIMFLDDYLKQIDRLISRFEEGMK 128

Query: 131 VNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDM 190
              E+F WF+THV+D KLEPS+GH+ELC+LLS+ GK+KDE ISLL+NAG+L RQLIDP++
Sbjct: 129 RGKEIFLWFKTHVIDCKLEPSIGHQELCTLLSLGGKIKDEDISLLMNAGLLNRQLIDPNV 188

Query: 191 YWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIG 250
           YWFAIP+IGSVLKG+SQGRKE+IS L R KYKEMM+  L+KK LRFS LDMRFH+RDLIG
Sbjct: 189 YWFAIPSIGSVLKGISQGRKELISLLKRTKYKEMMMTSLQKKRLRFSSLDMRFHIRDLIG 248

Query: 251 SGHLKTIHTPTGLVVQISKD 270
           SG+L+T+ +PTGL+VQ+SKD
Sbjct: 249 SGYLQTVQSPTGLLVQLSKD 268

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79591618|ref|NP_850001.3| uncharacterized protein [Arabidopsis thaliana] gi|52354255|gb|AAU44448.1| hypothetical protein AT2G20495 [Arabidopsis thaliana] gi|60547715|gb|AAX23821.1| hypothetical protein At2g20495 [Arabidopsis thaliana] gi|330251923|gb|AEC07017.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/282 (69%), Positives = 235/282 (83%), Gaps = 12/282 (4%)

Query: 1   MKNDTN--SDSSKPKKRRRDEE----------IEAESSSSDRTLSLEENLTFSDTLVALR 48
           MK  TN  S +S+ KKRRR+E+          IE  + S D+ L LE++LTFSDT VALR
Sbjct: 1   MKKRTNPESSTSEAKKRRREEDDDKVGCSHSAIEDGAVSEDQCLPLEDDLTFSDTSVALR 60

Query: 49  IMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAI 108
           +MRAQFP ID+ SI PFILQSQLYSSVNDRTQVDRELE LRRE+V+RVFKLNTGQDDHAI
Sbjct: 61  MMRAQFPRIDQASIPPFILQSQLYSSVNDRTQVDRELECLRREKVVRVFKLNTGQDDHAI 120

Query: 109 MFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVK 168
           +FLDDYLNQ++ +VKRMEEKKQ +LE+F+ F+ HVLDSKLEPS+GH EL SLLS+ GKVK
Sbjct: 121 IFLDDYLNQVDRIVKRMEEKKQSDLEIFKLFKMHVLDSKLEPSIGHHELLSLLSLGGKVK 180

Query: 169 DEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLAL 228
           D HI+LLINAG+LTRQLIDPDMYWFAIP+ G + KGLSQGR E++S + R+++KEM LA 
Sbjct: 181 DAHITLLINAGLLTRQLIDPDMYWFAIPSTGKLWKGLSQGRNELLSLIKRKRHKEMFLAE 240

Query: 229 LEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
           LEKK LRFSPLD+RFH+RDLIGSGHLKT+ T +GL+V+I KD
Sbjct: 241 LEKKRLRFSPLDVRFHVRDLIGSGHLKTVQTTSGLIVRILKD 282

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085658|ref|XP_002307653.1| predicted protein [Populus trichocarpa] gi|222857102|gb|EEE94649.1| predicted protein [Populus trichocarpa]

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 177/230 (76%), Positives = 204/230 (88%), Gaps = 5/230 (2%)

Query: 44  LVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQ 103
           +VALRIMRAQFPHIDKVSI+PFIL SQLYSSV DRTQVDRELESLRRE+VLRVFKLNTGQ
Sbjct: 1   MVALRIMRAQFPHIDKVSIQPFILHSQLYSSVKDRTQVDRELESLRREKVLRVFKLNTGQ 60

Query: 104 DDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSI 163
           DDHAIMFLDDYL Q++ VVKRMEEKKQ NLEVFEWF+THV+D+K +PS+ H+EL S + I
Sbjct: 61  DDHAIMFLDDYLTQVDRVVKRMEEKKQRNLEVFEWFKTHVIDNKQDPSIDHQELVSSMDI 120

Query: 164 V---GKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRK 220
                ++   H+ LL  AG LTRQLIDP+MYWFAIPNIGS+LKGLSQGRKE++S +NR++
Sbjct: 121 YLNGNQLHWSHLELL--AGSLTRQLIDPNMYWFAIPNIGSILKGLSQGRKELLSLINRQR 178

Query: 221 YKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
           YKEMMLA LEKKHLR S LDMRFHLRDLIGSGHLKT++TPTGL+V++SKD
Sbjct: 179 YKEMMLAPLEKKHLRLSLLDMRFHLRDLIGSGHLKTVNTPTGLLVRVSKD 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326517794|dbj|BAK03815.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  359 bits (921), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 174/267 (65%), Positives = 218/267 (81%), Gaps = 3/267 (1%)

Query: 7   SDSSKPKKRRRDEEIEAESSSSDRT---LSLEENLTFSDTLVALRIMRAQFPHIDKVSIR 63
           S SS+ KK+R     +  +SS  RT    SL +NL FSDTL+AL++MR QFP ++KV  +
Sbjct: 16  SSSSRGKKKRPRSPNDDATSSQGRTENSTSLGDNLIFSDTLIALQLMRTQFPKLEKVVTQ 75

Query: 64  PFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVK 123
           PFILQSQLYSSV DRTQVDR+LESL+++RVLRVFKLNTGQDDHAIMF+DDYL Q++  V+
Sbjct: 76  PFILQSQLYSSVKDRTQVDRDLESLKKDRVLRVFKLNTGQDDHAIMFMDDYLKQMQSAVR 135

Query: 124 RMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTR 183
           R   K + + EVFEWF+ +VL SKL+ S+ H ELCSLLS  G   D+HI+LL+NAG+LTR
Sbjct: 136 RSTGKNKDDNEVFEWFEKYVLHSKLDVSIDHLELCSLLSHGGDATDKHITLLMNAGLLTR 195

Query: 184 QLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRF 243
           QLIDP++YWF+IP+IG +LKGLSQGRKE++S LNRRKYKEM+L+ LEK  LR SPLD+RF
Sbjct: 196 QLIDPNIYWFSIPSIGPILKGLSQGRKEVLSLLNRRKYKEMLLSSLEKTRLRLSPLDVRF 255

Query: 244 HLRDLIGSGHLKTIHTPTGLVVQISKD 270
           HLRDLIGSGH+KT+ TPTGL+V++S D
Sbjct: 256 HLRDLIGSGHIKTVQTPTGLLVRVSTD 282

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357123000|ref|XP_003563201.1| PREDICTED: serine/threonine-protein kinase 19-like [Brachypodium distachyon]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 178/269 (66%), Positives = 212/269 (78%), Gaps = 8/269 (2%)

Query: 7   SDSSKPKKRRR-----DEEIEAESSSSDRTLSLEENLTFSDTLVALRIMRAQFPHIDKVS 61
           S SS+ KKR R     DE       +S R   LE+NLTFSDTL+AL++MR QFP ++KV 
Sbjct: 5   SSSSRKKKRLRSPNDNDEHPLGRIETSTR---LEDNLTFSDTLIALQLMRTQFPKLEKVV 61

Query: 62  IRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECV 121
            RPFIL+SQLYSSV DRTQVDR+LESL+++RVLRVFKLNTGQDDHAIMF+DDYL QIE  
Sbjct: 62  TRPFILRSQLYSSVKDRTQVDRDLESLKKDRVLRVFKLNTGQDDHAIMFMDDYLKQIEFS 121

Query: 122 VKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGIL 181
           V+R   K Q   EVFEWF+ +V+ SKL+ S+ H EL SLLS  G   D+HI+LL+NAG+L
Sbjct: 122 VRRSTGKNQDGNEVFEWFERYVVHSKLDVSIDHLELYSLLSHGGDASDKHITLLMNAGLL 181

Query: 182 TRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDM 241
            RQLIDP+MYWFAIP+IG +LKGLSQGRKEI+S LNRRKYKEM+L  LE   LR SPLD+
Sbjct: 182 IRQLIDPNMYWFAIPSIGPILKGLSQGRKEILSLLNRRKYKEMLLCSLENTRLRLSPLDV 241

Query: 242 RFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
           RFHLRDLIGSGH+KT+ TPTG + +ISKD
Sbjct: 242 RFHLRDLIGSGHIKTVQTPTGFLARISKD 270

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115471945|ref|NP_001059571.1| Os07g0458800 [Oryza sativa Japonica Group] gi|113611107|dbj|BAF21485.1| Os07g0458800, partial [Oryza sativa Japonica Group]

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 165/240 (68%), Positives = 203/240 (84%)

Query: 31  TLSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQVDRELESLRR 90
           T SLE+ LTFSDT++AL++MR QFP ++KV   PFILQSQLYSSV DRTQVDR+LESL++
Sbjct: 43  TSSLEDTLTFSDTMIALQLMRTQFPKLEKVVTEPFILQSQLYSSVKDRTQVDRDLESLKK 102

Query: 91  ERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEP 150
           ++VLRVFKLNTGQDDHAIMF+DDYL Q+   VKR   K Q   EVF WF+ +V+  KLE 
Sbjct: 103 DKVLRVFKLNTGQDDHAIMFMDDYLKQMALAVKRSRGKDQDGTEVFGWFERYVIHLKLEV 162

Query: 151 SVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRK 210
           S+   +L SLLS+ G V D+HI+LL+NAG+LTRQLIDP+MYWF+IP+IG VLKGL+QGRK
Sbjct: 163 SIDQRDLFSLLSLGGDVTDKHITLLMNAGLLTRQLIDPNMYWFSIPSIGPVLKGLTQGRK 222

Query: 211 EIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
           EI+S LNR+KYKEM+L+ LEK  LRFSPLD+RFH+RDLIGSGH+KT+ TPTGL+V+ISKD
Sbjct: 223 EILSLLNRKKYKEMLLSSLEKTRLRFSPLDVRFHIRDLIGSGHIKTVQTPTGLLVRISKD 282

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
TAIR|locus:504955990	282	AT2G20495 "AT2G20495" [Arabido	0.885	0.847	0.702	1.3e-86
UNIPROTKB|P49842	368	STK19 "Serine/threonine-protei	0.762	0.559	0.267	7.4e-18
DICTYBASE|DDB_G0279761	391	DDB_G0279761 "G11 family prote	0.477	0.329	0.326	1.3e-16
UNIPROTKB|B7ZLI8	321	STK19 "Serine/threonine-protei	0.751	0.632	0.263	4.1e-16
UNIPROTKB|A5A8W9	254	STK19 "Serine/threonine kinase	0.751	0.799	0.25	2.6e-15
MGI|MGI:1860085	254	Stk19 "serine/threonine kinase	0.751	0.799	0.259	4.2e-15
UNIPROTKB|A5A8X0	193	STK19 "Serine/threonine kinase	0.222	0.310	0.338	2e-07

TAIR|locus:504955990 AT2G20495 "AT2G20495" [Arabidopsis thaliana (taxid:3702)]

 Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
 Identities = 168/239 (70%), Positives = 198/239 (82%)

Query:    32 LSLEENLTFSDTLVALRIMRAQFPHIDKVSIRPFILQSQLYSSVNDRTQXXXXXXXXXXX 91
             L LE++LTFSDT VALR+MRAQFP ID+ SI PFILQSQLYSSVNDRTQ           
Sbjct:    44 LPLEDDLTFSDTSVALRMMRAQFPRIDQASIPPFILQSQLYSSVNDRTQVDRELECLRRE 103

Query:    92 XXXXXFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPS 151
                  FKLNTGQDDHAI+FLDDYLNQ++ +VKRMEEKKQ +LE+F+ F+ HVLDSKLEPS
Sbjct:   104 KVVRVFKLNTGQDDHAIIFLDDYLNQVDRIVKRMEEKKQSDLEIFKLFKMHVLDSKLEPS 163

Query:   152 VGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKE 211
             +GH EL SLLS+ GKVKD HI+LLINAG+LTRQLIDPDMYWFAIP+ G + KGLSQGR E
Sbjct:   164 IGHHELLSLLSLGGKVKDAHITLLINAGLLTRQLIDPDMYWFAIPSTGKLWKGLSQGRNE 223

Query:   212 IISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQISKD 270
             ++S + R+++KEM LA LEKK LRFSPLD+RFH+RDLIGSGHLKT+ T +GL+V+I KD
Sbjct:   224 LLSLIKRKRHKEMFLAELEKKRLRFSPLDVRFHVRDLIGSGHLKTVQTTSGLIVRILKD 282

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P49842 STK19 "Serine/threonine-protein kinase 19" [Homo sapiens (taxid:9606)]

 Score = 220 (82.5 bits), Expect = 7.4e-18, P = 7.4e-18
 Identities = 58/217 (26%), Positives = 110/217 (50%)

Query:    54 FPH-IDKVSIRPFILQSQLYSSVNDRTQXXXXXXXXXXXXXXXXFKLNTGQDDHAIMFLD 112
             FP  + + ++ P +L+SQ+YS V DRT                  +L    D H I+F +
Sbjct:   157 FPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTE 216

Query:   113 DYLNQI-ECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEH 171
             DY  ++ +CV+K  + +        + F   VL +  + S   +++          +D  
Sbjct:   217 DYRTRVCDCVLKACDGRPYAG--AVQKFLASVLPACGDLSFQQDQMTQTFGF----RDSE 270

Query:   172 ISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLE 230
             I+ L+NAG+LT +  D   +W A+P  G  +K   +GR+ ++S + + KY+E++L+ LL 
Sbjct:   271 ITHLVNAGVLTVR--DAGSWWLAVPGAGRFIKYFVKGRQAVLSMVRKAKYRELLLSELLG 328

Query:   231 KKHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
             ++      L + +H+ DLIG+  +  I T +G ++++
Sbjct:   329 RRAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLRL 365

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=TAS

DICTYBASE|DDB_G0279761 DDB_G0279761 "G11 family protein kinase DDB_G0279761" [Dictyostelium discoideum (taxid:44689)]

 Score = 172 (65.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 45/138 (32%), Positives = 76/138 (55%)

Query:   134 EVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEH-----ISLLINAGILTRQLIDP 188
             E+ + F   ++ +  E S+   +L  LLSIV    D H     I+ L+  G+L ++  D 
Sbjct:   251 EILDLFIKKLIPNFNEVSITRSKLFQLLSIVND--DHHQQENIITHLVQCGLLLQK--DD 306

Query:   189 DMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKHLRFSPLDMRFHLRDL 248
               + F++P  G     L +GRKEI+S + R KYKE++   L KK L++S + M+  ++DL
Sbjct:   307 CTFTFSVPGAGGFFLNLMKGRKEILSNIQRLKYKEILKKDLLKKKLKYSNVQMQLLIKDL 366

Query:   249 IGSGHLKTIHTPTGLVVQ 266
             +G   +K I T  G +++
Sbjct:   367 LGLNKIKIIPTTQGELIR 384

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B7ZLI8 STK19 "Serine/threonine-protein kinase 19" [Homo sapiens (taxid:9606)]

 Score = 202 (76.2 bits), Expect = 4.1e-16, P = 4.1e-16
 Identities = 57/216 (26%), Positives = 107/216 (49%)

Query:    54 FPH-IDKVSIRPFILQSQLYSSVNDRTQXXXXXXXXXXXXXXXXFKLNTGQDDHAIMFLD 112
             FP  + + ++ P +L+SQ+YS V DRT                  +L    D H I+F +
Sbjct:   114 FPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTE 173

Query:   113 DYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHI 172
             DY  +   V+K  + +        + F   VL +  + S   +++          +D  I
Sbjct:   174 DYRTR---VLKACDGRPYAG--AVQKFLASVLPACGDLSFQQDQMTQTFGF----RDSEI 224

Query:   173 SLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLEK 231
             + L+NAG+LT +  D   +W A+P  G  +K   +GR+ ++S + + KY+E++L+ LL +
Sbjct:   225 THLVNAGVLTVR--DAGSWWLAVPGAGRFIKYFVKGRQAVLSMVRKAKYRELLLSELLGR 282

Query:   232 KHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
             +      L + +H+ DLIG+  +  I T +G ++++
Sbjct:   283 RAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLRL 318

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|A5A8W9 STK19 "Serine/threonine kinase 19" [Sus scrofa (taxid:9823)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 54/216 (25%), Positives = 105/216 (48%)

Query:    54 FPHI-DKVSIRPFILQSQLYSSVNDRTQXXXXXXXXXXXXXXXXFKLNTGQDDHAIMFLD 112
             FP +  + ++ P +L++Q+YS V DRT                  +L    D   I+F +
Sbjct:    47 FPRVLFEDALPPIVLRNQVYSLVPDRTVADRQLKALQEQGEIRIIQLGFDLDAQGIIFTE 106

Query:   113 DYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHI 172
             DY  +   V+K  E +        + F   VL +  + S   +++          +D  I
Sbjct:   107 DYRTR---VLKACEGRPYAG--TVQKFLASVLPACGDLSFQQDQMTQTFGF----RDPEI 157

Query:   173 SLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLEK 231
             + L+NAG+LT +  D   +W A+P  G  +K   +GR+ ++  + + KY+E++L+ LL +
Sbjct:   158 TQLVNAGVLTVR--DAGSWWLAVPGAGRFIKCFVKGRQAVLGMVRKAKYRELLLSELLGR 215

Query:   232 KHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
             +      L + +H+ DLIG+  +  + T +G ++++
Sbjct:   216 RAPATVRLGLAYHVHDLIGAQLVDCVSTTSGTLLRL 251

GO:0016301 "kinase activity" evidence=IEA

MGI|MGI:1860085 Stk19 "serine/threonine kinase 19" [Mus musculus (taxid:10090)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 56/216 (25%), Positives = 105/216 (48%)

Query:    54 FPH-IDKVSIRPFILQSQLYSSVNDRTQXXXXXXXXXXXXXXXXFKLNTGQDDHAIMFLD 112
             FP  + + ++ P  L+SQ+YS V DRT                  +L    D H I+F +
Sbjct:    47 FPRGLFEDALPPIALRSQVYSLVPDRTVADLQLKELQELGEIRIIQLGFDLDAHGIVFTE 106

Query:   113 DYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHI 172
             DY  +   V+K  + +        + F   VL +  + S   +++          +D  I
Sbjct:   107 DYRTR---VLKACDGRPCAG--AVQKFLASVLPACGDLSFQQDQMTQTYGF----RDPEI 157

Query:   173 SLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA-LLEK 231
             + L+NAG+LT +  D   +W A+P  G  +K   +GR+ ++S + + KY+E+ L+ LL +
Sbjct:   158 TQLVNAGVLTVR--DAGSWWLAVPGAGRFIKCFVKGRQAVLSMVRKAKYRELALSELLGR 215

Query:   232 KHLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
             +      L + +H+ DLIG+  +  + T +G ++++
Sbjct:   216 RAPLAVRLGLAYHVHDLIGAQLVDCVPTTSGTLLRL 251

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|A5A8X0 STK19 "Serine/threonine kinase 19" [Sus scrofa (taxid:9823)]

 Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 21/62 (33%), Positives = 39/62 (62%)

Query:   168 KDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFLNRRKYKEMMLA 227
             +D  I+ L+NAG+LT +  D   +W A+P  G  +K   +GR+ ++  + + KY+E++L+
Sbjct:   121 RDPEITQLVNAGVLTVR--DAGSWWLAVPGAGRFIKCFVKGRQAVLGMVRKAKYRELLLS 178

Query:   228 LL 229
              L
Sbjct:   179 EL 180

GO:0016301 "kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	270
pfam10494	232	pfam10494, Stk19, Serine-threonine protein kinase	1e-48

>gnl|CDD|220782 pfam10494, Stk19, Serine-threonine protein kinase 19

 Score =  160 bits (406), Expect = 1e-48
 Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 36/238 (15%)

Query: 46  ALRIMRAQFPHIDKVS-IRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNTGQ- 103
            L   R       + + + P +  SQLYS + + T+V+RELE L RE ++R F +N G  
Sbjct: 15  GLNSTRIAEVLKYRRNTLPPLVTVSQLYSLLQNPTKVERELEELIREGIIRKFVINNGLG 74

Query: 104 -------DDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSKLEPSVGHEE 156
                  D   ++  DDYL++ +     +E+           F   ++ +    S+G  E
Sbjct: 75  KVLYLFEDVEGLVKSDDYLDKFKSESTLLEK-----------FLKLLISNPNALSIGRSE 123

Query: 157 LCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIGSVLKGLSQGRKEIISFL 216
           L +   I         +LL+ AG LT    +   Y  ++PN G  LK L+ GRK ++S L
Sbjct: 124 LFTGEEI---------TLLVQAGFLTSSESETHSYHISLPNTGPFLKLLNSGRKWLLSLL 174

Query: 217 NRRKYKEMMLALLEKK-------HLRFSPLDMRFHLRDLIGSGHLKTIHTPTGLVVQI 267
            + KYKE++  LL K+          F  LD  +HL DL+G+G ++  +T  G  V++
Sbjct: 175 KKSKYKELLEDLLRKRWDGASEKWKPFYGLDFEWHLADLLGAGLIEVFNTSVGRGVRL 232

This serine-threonine protein kinase number 19 is expressed from the MHC and predominantly in the nucleus. Protein kinases are involved in signal transduction pathways and play fundamental roles in the regulation of cell functions. This is a novel Ser/Thr protein kinase, that has Mn2+-dependent protein kinase activity that phosphorylates alpha -casein at Ser/Thr residues and histone at Ser residues. It can be covalently modified by the reactive ATP analogue 5'-p-fluorosulfonylbenzoyladenosine in the absence of ATP, and this modification is prevented in the presence of 1 mM ATP, indicating that the kinase domain of is capable of binding ATP. Length = 232

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	270
PF10494	250	Stk19: Serine-threonine protein kinase 19; InterPr	100.0

>PF10494 Stk19: Serine-threonine protein kinase 19; InterPro: IPR018865 This serine-threonine protein kinase number 19 is expressed from the MHC and predominantly in the nucleus

Probab=100.00  E-value=1.3e-63  Score=453.90  Aligned_cols=215  Identities=35%  Similarity=0.505  Sum_probs=186.1

Q ss_pred             HHHHHHHHHhCCcccccc-CCCeeeehhhhhhcCCcchHHHHHHHHHhcCceeEEEecC-CCCcEEEEehHHHHHHHHHH
Q 024264           44 LVALRIMRAQFPHIDKVS-IRPFILQSQLYSSVNDRTQVDRELESLRRERVLRVFKLNT-GQDDHAIMFLDDYLNQIECV  121 (270)
Q Consensus        44 ~~Al~~lr~~fP~~~~~~-lPPlVl~~qLysll~~~T~VdReL~~L~~~G~lR~f~i~~-g~d~~~lV~t~Dy~~~v~~~  121 (270)
                      ..+|.+.+..||.-++.+ +||||++|||||+++|||+|||||++|+++|+||+|+|++ ++.+.|+|.++||+.+|...
T Consensus        13 ~~gl~~~~~a~~l~~r~~~lPplV~~~qLysl~~~~T~Vdrel~~L~~~G~lR~f~i~~~~~~g~~l~~~~d~~~iv~~~   92 (250)
T PF10494_consen   13 RAGLNSTRIAEVLNYRRSTLPPLVLVHQLYSLLQDPTFVDRELEELIRKGKLRKFKIPNRGGLGDVLVGFEDYEAIVRTS   92 (250)
T ss_pred             HHHHhHHHHHHhhhhhhhcCCCEEEHHHhhHhhCCCcHHHHHHHHHHHCCCEEEEEECCccccceEEeecccHHHHHHHH
Confidence            568999999988655555 9999999999999999999999999999999999999999 44444666666666655542


Q ss_pred             HHHh---hhhh-hc-hHHHHHHHHHHhhccCCCCccchhhhhhhhhccCCCChHHHHHHHHcCccccccCCCCeEEEecC
Q 024264          122 VKRM---EEKK-QV-NLEVFEWFQTHVLDSKLEPSVGHEELCSLLSIVGKVKDEHISLLINAGILTRQLIDPDMYWFAIP  196 (270)
Q Consensus       122 ~~~~---~~~~-~~-~~~~~~kF~~~l~~~~~~~si~~~~L~~~ls~~~~f~d~eit~LV~aGfLt~~~~d~~~y~lSiP  196 (270)
                      ....   .... .+ ..++++||++++.++|++.+|++.         ..|++++|++||+|||||++++|+++||||+|
T Consensus        93 ~yl~~~~~~~~~~~~~~~~~~kFl~~l~~~~~~~~i~~~---------~~f~~~ei~~LV~aGfLt~~~~d~~sy~ls~P  163 (250)
T PF10494_consen   93 DYLDKILKSSEGLDKSSEVLEKFLELLKENPTDLSISHS---------ELFSDEEISLLVRAGFLTSNEIDAGSYWLSLP  163 (250)
T ss_pred             HHHHHHHHhhhhhhhHHHHHHHHHHHHhhCCCCcccchh---------hccChhHHHHHHHCCcceeeccCCCEEEEECC
Confidence            1100   0000 00 258899999999999999999942         58999999999999999998789999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHhc----------------cCCCCCcchhhhhhhccCcceEEEecC
Q 024264          197 NIGSVLKGLSQGRKEIISFLNRRKYKEMMLALLEKKH----------------LRFSPLDMRFHLRDLIGSGHLKTIHTP  260 (270)
Q Consensus       197 n~G~flkll~~GR~~ll~~Lkk~kykE~l~~~L~~R~----------------~~~~gl~~~w~L~D~iGaG~Ve~f~Ts  260 (270)
                      |+|+|+|++++||+||+++|+|+||||||+++|++||                +++|||+|+|||+||+|||+||||+||
T Consensus       164 n~G~flkll~~gR~~ll~~LkkskykE~le~~L~~rw~g~~~~~~~~~~~~k~k~~~gl~~~w~L~D~lGaG~Ve~f~T~  243 (250)
T PF10494_consen  164 NCGPFLKLLSAGRKWLLSLLKKSKYKEALESDLEERWDGGVLSDDSPGRTRKWKPFYGLGFRWHLADLLGAGLVEVFNTS  243 (250)
T ss_pred             CccHHHHHHHHHHHHHHHHHhhcchhhhhHHHHHHHhcccccccccchhhcccccccCcChhhhhhhhcCCCeEEEEECC
Confidence            9999999999999999999999999999999999994                699999999999999999999999999


Q ss_pred             ceeeEee
Q 024264          261 TGLVVQI  267 (270)
Q Consensus       261 vG~~vRl  267 (270)
                      ||+|||+
T Consensus       244 vG~~~Rl  250 (250)
T PF10494_consen  244 VGRGVRL  250 (250)
T ss_pred             ccceeeC
Confidence            9999996

Protein kinases are involved in signal transduction pathways and play fundamental roles in the regulation of cell functions. This is a novel Ser/Thr protein kinase, that has Mn2+-dependent protein kinase activity that phosphorylates alpha -casein at Ser/Thr residues and histone at Ser residues. It can be covalently modified by the reactive ATP analogue 5'-p-fluorosulphonylbenzoyladenosine in the absence of ATP, and this modification is prevented in the presence of 1 mM ATP, indicating that the kinase domain of is capable of binding ATP [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	270
2v9v_A	135	Selenocysteine-specific elongation factor; transcr	85.48
1lva_A	258	Selenocysteine-specific elongation factor; winged-	83.09

>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35

Probab=85.48  E-value=5.3  Score=30.93  Aligned_cols=108  Identities=15%  Similarity=0.139  Sum_probs=69.5

Q ss_pred             hhhhhhcC-CcchHHHHHHHHHhcCceeEEEecCCCCcEEEEehHHHHHHHH-HHHHHhhhhhhchHHHHHHHHHHhhcc
Q 024264           69 SQLYSSVN-DRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIE-CVVKRMEEKKQVNLEVFEWFQTHVLDS  146 (270)
Q Consensus        69 ~qLysll~-~~T~VdReL~~L~~~G~lR~f~i~~g~d~~~lV~t~Dy~~~v~-~~~~~~~~~~~~~~~~~~kF~~~l~~~  146 (270)
                      +.|-.... ++..++..++.|...|.|..|--  +.+.+ + ...+|...+. +..           +++..|.   ..+
T Consensus        21 ~~l~~~~~l~~~~l~~~l~~l~~~~~~~~~~~--~~~~~-~-~~~~~~~~l~~~l~-----------~~L~~yH---~~~   82 (135)
T 2v9v_A           21 QEAATRASLSLEETRKLLQSMAAAGQVTLLRV--ENDLY-A-ISTERYQAWWQAVT-----------RALEEFH---SRY   82 (135)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHTTCEEEEEE--TTEEE-E-EEHHHHHHHHHHHH-----------HHHHHHH---HHC
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHhCCcEEEEec--CCCeE-E-ecHHHHHHHHHHHH-----------HHHHHHH---HhC
Confidence            55544443 67889989999999999776532  12222 3 4444444444 332           3344444   589


Q ss_pred             CCCCccchhhhhhhhhc--cCCCChHHHHHHHHcCccccccCCCCeEEEecCCch
Q 024264          147 KLEPSVGHEELCSLLSI--VGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIG  199 (270)
Q Consensus       147 ~~~~si~~~~L~~~ls~--~~~f~d~eit~LV~aGfLt~~~~d~~~y~lSiPn~G  199 (270)
                      |...-+++.+|.+.+..  ...+-+.=+..|+..|.|...  ++   |+++|+..
T Consensus        83 P~~~G~~keeLr~~~~~~~~~~~~~~ll~~l~~~g~l~~~--~~---~v~Lp~h~  132 (135)
T 2v9v_A           83 PLRPGLAREELRSRYFSRLPARVYQALLEEWSREGRLQLA--AN---TVALAGFT  132 (135)
T ss_dssp             TTSSCEEHHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEC--SS---EEEETTCC
T ss_pred             CCccCCCHHHHHHHhcccCCHHHHHHHHHHHHHCCCEEec--CC---EEECCCCc
Confidence            99999999999877631  112234457888999999973  22   78889865

>1lva_A Selenocysteine-specific elongation factor; winged-helix, translation; 2.12A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35 a.4.5.35 a.4.5.35 PDB: 2uwm_A 2ply_A 1wsu_A

Probab=83.09  E-value=9.1  Score=33.53  Aligned_cols=131  Identities=14%  Similarity=0.118  Sum_probs=86.3

Q ss_pred             hhhhhhcC-CcchHHHHHHHHHhcCceeEEEecCCCCcEEEEehHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHhhccC
Q 024264           69 SQLYSSVN-DRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVVKRMEEKKQVNLEVFEWFQTHVLDSK  147 (270)
Q Consensus        69 ~qLysll~-~~T~VdReL~~L~~~G~lR~f~i~~g~d~~~lV~t~Dy~~~v~~~~~~~~~~~~~~~~~~~kF~~~l~~~~  147 (270)
                      +.|-.... ++..++..++.|...|.|..|.-  +.+.+ ++-.+-|..+..+..           +++..   +-..||
T Consensus        21 ~~l~~~~~l~~~~l~~~l~~l~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~-----------~~L~~---~H~~~P   83 (258)
T 1lva_A           21 QEAATRASLSLEETRKLLQSMAAAGQVTLLRV--ENDLY-AISTERYQAWWQAVT-----------RALEE---FHSRYP   83 (258)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE--TTEEE-EEEHHHHHHHHHHHH-----------HHHHH---HHHHCT
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHhCCCEEEecc--CCccE-EEcHHHHHHHHHHHH-----------HHHHH---HHHhCC
Confidence            55544444 67889989999999999776532  12222 444554444444432           33334   445899


Q ss_pred             CCCccchhhhhhhhhc--cCCCChHHHHHHHHcCccccccCCCCeEEEecCCch-HHHHHHHHHHHHHHHHHhccch
Q 024264          148 LEPSVGHEELCSLLSI--VGKVKDEHISLLINAGILTRQLIDPDMYWFAIPNIG-SVLKGLSQGRKEIISFLNRRKY  221 (270)
Q Consensus       148 ~~~si~~~~L~~~ls~--~~~f~d~eit~LV~aGfLt~~~~d~~~y~lSiPn~G-~flkll~~GR~~ll~~Lkk~ky  221 (270)
                      ...-+++.+|.+.+..  ...+-+.=+..|+..|.|...  ++   |+++|+.. .+.....+....|...+++..|
T Consensus        84 ~~~G~~~~~L~~~~~~~~~~~l~~~ll~~l~~~g~l~~~--~~---~v~l~~h~~~~~~~~~~~~~~i~~~~~~~g~  155 (258)
T 1lva_A           84 LRPGLAREELRSRYFSRLPARVYQALLEEWSREGRLQLA--AN---TVALAGFTPSFSETQKKLLKDLEDKYRVSRW  155 (258)
T ss_dssp             TSSCEEHHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEE--TT---EEEETTCCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CccCCCHHHHHHhccccCCHHHHHHHHHHHHHCCCEEec--CC---EEeCCCCccCCCHHHHHHHHHHHHHHHHCCC
Confidence            9999999999877621  112223446778889998863  22   78889954 5778888888999999977664

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	270
d1lnwa_	141	MexR repressor {Pseudomonas aeruginosa [TaxId: 287	84.71
d1lj9a_	144	Transcriptional regulator SlyA {Enterococcus faeca	83.12

>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: MarR-like transcriptional regulators
domain: MexR repressor
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.71  E-value=4.1  Score=30.11  Aligned_cols=62  Identities=15%  Similarity=0.177  Sum_probs=51.9

Q ss_pred             ccCCCeeeehhhhhhcC-CcchHHHHHHHHHhcCceeEEEecCCCCcEEEEehHHHHHHHHHHH
Q 024264           60 VSIRPFILQSQLYSSVN-DRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVV  122 (270)
Q Consensus        60 ~~lPPlVl~~qLysll~-~~T~VdReL~~L~~~G~lR~f~i~~g~d~~~lV~t~Dy~~~v~~~~  122 (270)
                      ...|| ++.++|-..+. +++.|-|-|..|.++|-|.+..-+.+.-..-|..|+.-...+....
T Consensus        46 ~~~~~-~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l~lT~~G~~~~~~~~  108 (141)
T d1lnwa_          46 DEQRG-LNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAE  108 (141)
T ss_dssp             HSSTT-CBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSSSEEEEECHHHHHHHHHHH
T ss_pred             HHCCC-CCHHHHHHHHCccHhHHHHHHHHHHHhhceeeeccCCCCcchhhccCHHHHHHHHHHH
Confidence            34677 58999988776 9999999999999999999988777666678899999888877654

>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: MarR-like transcriptional regulators
domain: Transcriptional regulator SlyA
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.12  E-value=5.8  Score=29.38  Aligned_cols=60  Identities=17%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             CCCeeeehhhhhhcC-CcchHHHHHHHHHhcCceeEEEecCCCCcEEEEehHHHHHHHHHHH
Q 024264           62 IRPFILQSQLYSSVN-DRTQVDRELESLRRERVLRVFKLNTGQDDHAIMFLDDYLNQIECVV  122 (270)
Q Consensus        62 lPPlVl~~qLysll~-~~T~VdReL~~L~~~G~lR~f~i~~g~d~~~lV~t~Dy~~~v~~~~  122 (270)
                      -|| ++.++|-..+. +++.|-+-|..|.++|-|.+..-+.+.=...|..|+.=.+.+....
T Consensus        41 ~~~-~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT~~G~~~~~~~~  101 (144)
T d1lj9a_          41 NPG-IIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIV  101 (144)
T ss_dssp             STT-EEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHHHHH
T ss_pred             CCC-CCHHHHHHHHCccHhhHHHHHHHHHhhhcccccCCCCCCCccccccCHHHHHHHHHHH
Confidence            377 58889988776 9999999999999999999977777666668888998888887754