Citrus Sinensis ID: 024319

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTEDLFRRYKRGWT
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccEEEccccHHHHHHcccccccHHHHHHHHccccHHHccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccEEEEccccHHHHHHHcccccHHHHHHHHHHcccHHHHHHHccccHHHHHHcccccccccccccccccccEEEcccEEcccccccccccHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccc
Coil and Loop (DISEMBL)
MGVSNNITAVLNFIALLCSIPiiasgiwlaskpdnecihlfrWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVvtrpdgsyyvpgraykeYRLDKFSSWLrdhvvdsknwNKIRACLADTDTCSKLSQQYVTADQffsahisplqarcckppticgfsyvnptlwlnpvnptgdpdcflwsndqsqlcyncssckagllgnlrNEWRKANIILIVAVVILIWVYLIACSAFKNAQTEDLFRRYKRGWT
Flexible Loop (DISEMBL)
MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVtrpdgsyyvpgraykEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSafknaqtedLFRRYKRGWT
Low Complexity Region (SEG)
MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPvvllgvlvllvSLCGFIGAYWYKETLLAFYLCVMailivlllvvlvfafvvTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKaniilivavviliwvyliaCSAFKNAQTEDLFRRYKRGWT
Disordered region (IsUnstruct)
*****NITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTEDLFRRY*****
Disordered Region (DISOPRED)
***SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSA*ISP*****CKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTE*LF********
Disordered Region (DISEMBL)
MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTEDLFRRYKRGWT
Disordered Region (DISPRO)
*GVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTED*F*R******
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKNAQTEDLFRRYKRGWT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
Q9ZUN5	270	Tetraspanin-2 OS=Arabidop	yes	no	0.996	0.992	0.758	1e-112
Q9FIQ5	269	Protein TORNADO 2 OS=Arab	no	no	1.0	1.0	0.524	2e-71
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	no	no	0.962	0.908	0.430	2e-62
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	no	no	0.966	0.952	0.448	3e-61
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.955	0.977	0.397	6e-56
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.955	0.944	0.382	3e-53
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.951	0.782	0.404	9e-50
Q9C7C1	282	Tetraspanin-6 OS=Arabidop	no	no	0.895	0.854	0.403	7e-45
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.944	0.937	0.374	1e-44
F4I214	284	Tetraspanin-10 OS=Arabido	no	no	0.895	0.848	0.362	2e-44

>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/269 (75%), Positives = 242/269 (89%), Gaps = 1/269 (0%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWPVV+LGVL+L+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAY YKETLLA YLC MAILI LLLVVL+FAFVVTRPDGSY VPGR YKEYRL+ FS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFF-SAHISPLQARCCKPPTICGFS 179
           L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFF S+ I+PLQ+ CCKPPT CG++
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
           +VNPTLWLNP N   D DC+LWSNDQSQLCYNC+SCKAGLLGNLR EWRKAN+ILI+ VV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 240 ILIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           +LIWVY+IACSAF+NAQTEDLFR+YK+GW
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGW 269

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1

 Score =  269 bits (687), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 141/269 (52%), Positives = 190/269 (70%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           M +SNN+   +NFI +L SIP+I +GIWLA    N C+ L +WPV++LGVL+LLV L GF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IG +W    LL  YL  M ILIVLL  ++ F ++VT     +  P RAY EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR  V  S  W +IR CL+ T  C +L+Q+Y  A  FF+AH+ P+Q+ CCKPPT CGF++
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           VNPT W++P++ + D DC  WSNDQ+ LCY C SCKAGLL N++ +W KA+I L++A++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGWT 269
           LI VY+I C AF+NA+TED+FR+YK+G+T
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGYT 269

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score =  239 bits (609), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/265 (43%), Positives = 172/265 (64%), Gaps = 6/265 (2%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
           M  SN++  ++NF+  L SIPI+  GIWL+S+ ++ +C+   +WP++++G+ +++VSL G
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 60  FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
           F GA +  + L+  YL VM ++I  L+  ++FA+ VT       V  R Y +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQARCCKPPTI 175
           WL+D V D   W KI +CL D+  C K+ + +     TAD FF   +SP+++ CCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 176 CGFSYVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIIL 234
           CGFSYVN T W       G + DC +WSNDQS LCY CSSCKAG+LG+L+  WRK ++I 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 235 IVAVVILIWVYLIACSAFKNAQTED 259
           IV ++IL+  Y+IA +A++N +  D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  235 bits (599), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/263 (44%), Positives = 167/263 (63%), Gaps = 3/263 (1%)

Query: 4   SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
           SNN+  +LNF+  L SIPI+A GIWL+ K   EC      PV+ LGV +++V++ G IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                 LL  YL VM +LI+L+  + VFAFVVT       + G+ YKEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQARCCKPPTICGFSYV 181
            V + KNWNKIR+CL ++  CSKL  ++V    + F+  H++ LQ+ CCKP   CGF YV
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 182 NPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           NPT W      T  +PDC  W N + +LC++C SCKAGLL N+++ W+K  I+ IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

Query: 241 LIWVYLIACSAFKNAQTEDLFRR 263
           LI VY + C AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score =  217 bits (553), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 106/267 (39%), Positives = 154/267 (57%), Gaps = 10/267 (3%)

Query: 4   SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
           SNN+  +LNF   L SIPI+++GIWL      EC      P+V+LG+ ++ VS+ G +GA
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query: 64  YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                 LL  YL  M +LI+L     +FAF VT       +  R YKEY +  +S+WL+ 
Sbjct: 65  CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQY--VTADQFFSAHISPLQARCCKPPTICGFSYV 181
            V ++KNW +IR+CL  +D CS    +Y  +  + F+ ++++ LQ+ CCKP   C F+YV
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYV 184

Query: 182 NPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVIL 241
           NPT W     P  + DC +W N    LCY+C +CKAGLL N++N W+K   + IV ++ L
Sbjct: 185 NPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFL 244

Query: 242 IWVYLIACSAFKNAQTEDLFRRYKRGW 268
           I VY + C AF+N +        KR W
Sbjct: 245 IIVYSVGCCAFRNNR--------KRSW 263

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  208 bits (530), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 161/264 (60%), Gaps = 7/264 (2%)

Query: 4   SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
           SN++  +LNF   L S+PI+++GIWL+ K   +C      P++ LGV ++++++ G +G+
Sbjct: 5   SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64

Query: 64  YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                 LL  YL VM  LI+++L   +FAFVVT       + G+AYKEYRL+ +S WL+ 
Sbjct: 65  CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124

Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQ----FFSAHISPLQARCCKPPTICGFS 179
            V ++K+WN IR+CL ++  C  L  + VTA+     F+   ++  ++ CCKP   C F+
Sbjct: 125 RVNNAKHWNSIRSCLYESKFCYNL--ELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFT 182

Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
           Y+  T W        + DC LW N++ +LCYNC +CKAG L NL+  W++  I+ I+ +V
Sbjct: 183 YITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLV 242

Query: 240 ILIWVYLIACSAFKNAQTEDLFRR 263
           +L+ VY + C AF+N + ED + R
Sbjct: 243 LLVVVYAMGCCAFRNNK-EDRYGR 265

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score =  197 bits (500), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 169/262 (64%), Gaps = 6/262 (2%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
           M   +N+  ++NF   L SIPI+  GIWL+S+ ++ +C+   +WP++++G+ ++++SL G
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 60  FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
             GA +  + L+  YL  M  +I  L+   +FA+VVT      +V  R Y +Y L+ +S 
Sbjct: 61  IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120

Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQARCCKPPTI 175
           WL+D V D+  W  I +C+ D+  C K+ +       TA  F+  ++SP+++ CCKPPT 
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180

Query: 176 CGFSYVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIIL 234
           CG++YVN T+W+      G +PDC LW+NDQ  LCY CSSCKAG+LG+L+  WRK ++I 
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 235 IVAVVILIWVYLIACSAFKNAQ 256
           IV V+IL+  Y+IAC+A++N +
Sbjct: 241 IVVVIILVIFYVIACAAYQNVK 262

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1

 Score =  181 bits (458), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/253 (40%), Positives = 150/253 (59%), Gaps = 12/253 (4%)

Query: 4   SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
           SN +  VLN + LL SIPII + ++ A +    C +  + P++++G ++L+VSL GFIGA
Sbjct: 5   SNTVIGVLNLLTLLASIPIIGTALYKA-RSSTTCENFLQTPLLVIGFIILIVSLAGFIGA 63

Query: 64  YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
            +     L  YL VM  LI  L+ + +F  VVT   G   VPGR YKEYRL  +  WLR+
Sbjct: 64  CFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRE 123

Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNP 183
            V D + WN IR+C+  + TC+K+ + + T D +F   ++ +Q+ CCKPPT C +     
Sbjct: 124 RVRDPEYWNSIRSCILSSKTCTKI-ESWTTLD-YFQRDMTSVQSGCCKPPTACTYE---- 177

Query: 184 TLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIW 243
                 V+  G  DCF W+N    LCY C +CKAG+L  +R +WRK +++ I+ +V+LI 
Sbjct: 178 ---AGVVD--GGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIA 232

Query: 244 VYLIACSAFKNAQ 256
           VY   C AF N +
Sbjct: 233 VYAAGCCAFHNTR 245

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score =  179 bits (455), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 149/262 (56%), Gaps = 8/262 (3%)

Query: 3   VSNNITAVLNFIALLCSIPIIASGIWL-ASKPDNECIHLFRWPVVLLGVLVLLVSLCGFI 61
           VSN +  + N + +L     I   I++   +   +C    R P++  G+++ LVSL G I
Sbjct: 4   VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63

Query: 62  GAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWL 121
           G+ + +   +  YL ++   IV L++  +F F VT       V GR YKEYR   FS+WL
Sbjct: 64  GSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL 123

Query: 122 RDHVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQARCCKPPTICGFS 179
            +  V  K W  IR+CLA+ + C  LS   V+  AD F+  ++SP+Q+ CCKPP+ C F 
Sbjct: 124 -NGFVGGKRWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFE 182

Query: 180 YVNPTLWLNPV-NPTG---DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILI 235
           + N T W+ P  N T    + DC  WSN Q++LC+NC++CKAG+L N+R +WR   +  I
Sbjct: 183 FRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFNI 242

Query: 236 VAVVILIWVYLIACSAFKNAQT 257
             +++LI VY   C A +N +T
Sbjct: 243 CLLILLITVYSCGCCARRNNRT 264

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1

 Score =  179 bits (453), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 147/243 (60%), Gaps = 2/243 (0%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MG S  +   +N + +L ++ +I  G+W+++  D  C     +PV+ LG  + L+S+ GF
Sbjct: 3   MGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDG-CRRSLTFPVIALGGFIFLISIIGF 61

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GA      LL  YL V+ I+++ +LV  V AF+VT     +  PG  YKEY+L+ +SSW
Sbjct: 62  LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
               + ++ NW ++++CL  ++ C KLS++Y T  Q  SA ++P++A CC+PP+ CG+  
Sbjct: 122 FLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPA 181

Query: 181 VNPTLW-LNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
           VN + + L+  + + + DC L+ N ++  CYNC SCKAG+   ++ EWR   I  +V  V
Sbjct: 182 VNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFV 241

Query: 240 ILI 242
           +LI
Sbjct: 242 VLI 244

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
224088023	269	predicted protein [Populus trichocarpa]	0.996	0.996	0.817	1e-120
225444948	269	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.795	1e-115
357520691	269	hypothetical protein MTR_8g101600 [Medic	0.996	0.996	0.753	1e-111
449446584	269	PREDICTED: uncharacterized protein LOC10	0.996	0.996	0.772	1e-111
388499794	269	unknown [Medicago truncatula]	0.996	0.996	0.75	1e-110
15224802	270	tetraspanin2 [Arabidopsis thaliana] gi|7	0.996	0.992	0.758	1e-110
297832202	270	hypothetical protein ARALYDRAFT_899924 [	0.996	0.992	0.750	1e-109
255546165	315	conserved hypothetical protein [Ricinus	0.996	0.850	0.697	1e-108
388514343	269	unknown [Lotus japonicus]	0.996	0.996	0.735	1e-105
356523882	269	PREDICTED: uncharacterized protein LOC10	0.996	0.996	0.761	1e-104

>gi|224088023|ref|XP_002308295.1| predicted protein [Populus trichocarpa] gi|118483296|gb|ABK93550.1| unknown [Populus trichocarpa] gi|222854271|gb|EEE91818.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 247/268 (92%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MGV+NNITAVLNFIA LCSIPIIA+GIWLASKP+NECIHLFRWPVVLLG L+LLVSL GF
Sbjct: 1   MGVANNITAVLNFIAFLCSIPIIAAGIWLASKPENECIHLFRWPVVLLGFLILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GAYWYKETLLAFYLC MAILI LLL++LVFAFVVTR DG Y VPGR Y+EYRL  FS+W
Sbjct: 61  VGAYWYKETLLAFYLCCMAILIGLLLILLVFAFVVTRADGGYDVPGRGYREYRLQGFSAW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR+HVV SKNW+KIR CLA+TD CSK++Q Y+TADQFF AHISPLQ+ CCKPPT+CG++Y
Sbjct: 121 LRNHVVYSKNWDKIRPCLAETDVCSKMTQNYITADQFFMAHISPLQSGCCKPPTVCGYNY 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           VNPTLWLNPVNP  DPDC+LW+NDQ+QLCYNC++CKAGLLGNLR EWRK N+ILIVAVV+
Sbjct: 181 VNPTLWLNPVNPAADPDCYLWNNDQNQLCYNCNACKAGLLGNLRREWRKTNVILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LIWVY+IACSAFKNAQTEDLFRRYK+GW
Sbjct: 241 LIWVYVIACSAFKNAQTEDLFRRYKQGW 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444948|ref|XP_002282397.1| PREDICTED: uncharacterized protein LOC100262870 [Vitis vinifera]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/269 (79%), Positives = 237/269 (88%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           M VSNNITAVLNF+ALLCSIPIIA+GIWLASKPDNECIHLFRWPV LLGVL+LLVSL GF
Sbjct: 1   MAVSNNITAVLNFLALLCSIPIIAAGIWLASKPDNECIHLFRWPVALLGVLILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GAYW K+ LLAFYL  M +LI LLL++LVFAFVV+  DGSY VPGRAYKEYRL+ FSSW
Sbjct: 61  VGAYWNKKGLLAFYLFCMGLLIGLLLILLVFAFVVSHSDGSYVVPGRAYKEYRLEGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR++V  S NWNKIR CLA +D CSKLSQ Y+TADQFF AHISPLQ+ CCKPPTIC + Y
Sbjct: 121 LRNYVTKSGNWNKIRTCLAQSDVCSKLSQNYITADQFFMAHISPLQSGCCKPPTICNYGY 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           VNPTLW+NP NP  D DC+ WSNDQSQLCY C+SCKAGLLGNLR EWR+AN+ILIVAVV+
Sbjct: 181 VNPTLWMNPTNPIADSDCYAWSNDQSQLCYGCNSCKAGLLGNLRKEWRRANVILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGWT 269
           LIWVYLIACSAFKNAQTEDLFRRYK+GW 
Sbjct: 241 LIWVYLIACSAFKNAQTEDLFRRYKQGWA 269

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520691|ref|XP_003630634.1| hypothetical protein MTR_8g101600 [Medicago truncatula] gi|355524656|gb|AET05110.1| hypothetical protein MTR_8g101600 [Medicago truncatula]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/268 (75%), Positives = 231/268 (86%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MGVSNNITAVLN IA+L SIPIIASGIWLASKPDNECI  FRWP+V++G+LV LV+L GF
Sbjct: 1   MGVSNNITAVLNIIAILASIPIIASGIWLASKPDNECIANFRWPIVIIGILVFLVALTGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAY+ KE LLA YL  MA+LI LLL++LVFAFVVTRPDGSY VP R YKE+RLD FSSW
Sbjct: 61  IGAYYNKEGLLALYLFAMALLIALLLIILVFAFVVTRPDGSYVVPDRGYKEFRLDGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR  V  S +W KI  CLA +D C KL+Q Y+TADQFF++HISPLQ+ CCKPPT+CG+SY
Sbjct: 121 LRHRVTGSGSWRKIMPCLAASDVCIKLTQNYITADQFFNSHISPLQSGCCKPPTVCGYSY 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           V+P +W NPVNP  D DC LW+NDQ+QLCYNC++CKAGLLGNLR EWRKANIILIVAVV+
Sbjct: 181 VSPIMWTNPVNPMADSDCNLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LIWVY+IACSAFKNAQTEDLF RYK+GW
Sbjct: 241 LIWVYVIACSAFKNAQTEDLFTRYKQGW 268

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446584|ref|XP_004141051.1| PREDICTED: uncharacterized protein LOC101204213 [Cucumis sativus] gi|449488027|ref|XP_004157920.1| PREDICTED: uncharacterized protein LOC101223702 [Cucumis sativus]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/268 (77%), Positives = 239/268 (89%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MG+SNNITA+LNF+ALLCSIPII +GIWLASKPDNECIH FRWPVVL+GVL+LLVSL GF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAYW ++ LLAFYL  MA+LI LLLV+LVF FVVTRPDGSY V GR +KEYRLD FSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           L+ H+ +S+NW KIR CLA++D C KL+QQY  ADQFF+A ISPLQ+ CCKPPT CGF++
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           VNPTLWLNPV+P  DPDC++WSNDQ+QLCYNC+SCKAGLLGNLR EWRKAN++LIV VV+
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LIWVY+I CSAFKNAQTEDLFRRYK+GW
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGW 268

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499794|gb|AFK37963.1| unknown [Medicago truncatula]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/268 (75%), Positives = 230/268 (85%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MGVSNNITAVLN IA+L SIPIIASGIWLASKPDNECI  FRWP+V++G+LV LV+L GF
Sbjct: 1   MGVSNNITAVLNIIAILASIPIIASGIWLASKPDNECIANFRWPIVIIGILVFLVALTGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAY+ KE LLA YL  MA+LI LLL++LVFAFVVTRPDGSY VP R YKE+RLD FSSW
Sbjct: 61  IGAYYNKEGLLALYLFAMALLIALLLIILVFAFVVTRPDGSYVVPDRGYKEFRLDGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR  V  S +W KI  CLA +D C KL+Q Y+TADQFF++HISPLQ+ CCKPPT+CG+SY
Sbjct: 121 LRHRVTGSGSWRKIMPCLAASDVCIKLTQNYITADQFFNSHISPLQSGCCKPPTVCGYSY 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           V+P +W NPVNP  D DC LW+NDQ+QLCYNC++C AGLLGNLR EWRKANIILIVAVV+
Sbjct: 181 VSPIMWTNPVNPMADSDCNLWNNDQNQLCYNCNACNAGLLGNLRKEWRKANIILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LIWVY+IACSAFKNAQTEDLF RYK+GW
Sbjct: 241 LIWVYVIACSAFKNAQTEDLFTRYKQGW 268

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224802|ref|NP_179548.1| tetraspanin2 [Arabidopsis thaliana] gi|75268040|sp|Q9ZUN5.1|TET2_ARATH RecName: Full=Tetraspanin-2 gi|4191796|gb|AAD10165.1| putative senescence-associated protein 5 [Arabidopsis thaliana] gi|40822966|gb|AAR92249.1| At2g19580 [Arabidopsis thaliana] gi|46518389|gb|AAS99676.1| At2g19580 [Arabidopsis thaliana] gi|110737940|dbj|BAF00907.1| putative senescence-associated protein 5 [Arabidopsis thaliana] gi|330251803|gb|AEC06897.1| tetraspanin2 [Arabidopsis thaliana]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/269 (75%), Positives = 242/269 (89%), Gaps = 1/269 (0%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWPVV+LGVL+L+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAY YKETLLA YLC MAILI LLLVVL+FAFVVTRPDGSY VPGR YKEYRL+ FS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFF-SAHISPLQARCCKPPTICGFS 179
           L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFF S+ I+PLQ+ CCKPPT CG++
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
           +VNPTLWLNP N   D DC+LWSNDQSQLCYNC+SCKAGLLGNLR EWRKAN+ILI+ VV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 240 ILIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           +LIWVY+IACSAF+NAQTEDLFR+YK+GW
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGW 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832202|ref|XP_002883983.1| hypothetical protein ARALYDRAFT_899924 [Arabidopsis lyrata subsp. lyrata] gi|297329823|gb|EFH60242.1| hypothetical protein ARALYDRAFT_899924 [Arabidopsis lyrata subsp. lyrata]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/269 (75%), Positives = 242/269 (89%), Gaps = 1/269 (0%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWPVV+LGVL+L+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           IGAY YKETLLA YLC MAILI LLLVVL+FAFVVTRPDGSY VPGR YKEYRL+ FS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFF-SAHISPLQARCCKPPTICGFS 179
           L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFF S+ I+PLQ+ CCKPP+ CG++
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPSACGYN 180

Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
           +VNPTLWLNP N   D DC++WSNDQSQLCYNC+SCKAGLLGNLR EWRKAN+ILI+ VV
Sbjct: 181 FVNPTLWLNPTNMAADADCYIWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 240 ILIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           +LIWVY+IACSAF+NAQTEDLFR+YK+GW
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGW 269

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546165|ref|XP_002514142.1| conserved hypothetical protein [Ricinus communis] gi|223546598|gb|EEF48096.1| conserved hypothetical protein [Ricinus communis]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/314 (69%), Positives = 248/314 (78%), Gaps = 46/314 (14%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MG++NNITA+LNFIA LCSIPIIASGIWLASKPDNECIH FRWP+V+LGVL+LLVSL GF
Sbjct: 1   MGLANNITAILNFIAFLCSIPIIASGIWLASKPDNECIHYFRWPLVILGVLILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GAYWYKETLLAFYLC MAILI L+L++LVFAFVVTR DG Y VPGR YKEYR++ FSSW
Sbjct: 61  VGAYWYKETLLAFYLCCMAILIGLILILLVFAFVVTRADGGYTVPGRGYKEYRVEGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQAR------------ 168
           L++H+VDSKNW KIR CL+++D CSKL Q Y+T+DQFF+AHISPLQA             
Sbjct: 121 LKNHIVDSKNWVKIRNCLSESDVCSKLIQNYITSDQFFAAHISPLQASSCFFLQQLLLEF 180

Query: 169 ----------------------------------CCKPPTICGFSYVNPTLWLNPVNPTG 194
                                             CCKPPT+CG++YVNPTLWLNP NPT 
Sbjct: 181 YSSLKLSHQSLGICKIEMLALRSDHCLPHEQNSGCCKPPTVCGYNYVNPTLWLNPANPTA 240

Query: 195 DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLIACSAFKN 254
           DPDC+LWSNDQSQLCYNC SCKAGLLGNLR EWRKAN+I+IVAVV+LIWVYLIACSAFKN
Sbjct: 241 DPDCYLWSNDQSQLCYNCDSCKAGLLGNLRKEWRKANVIIIVAVVVLIWVYLIACSAFKN 300

Query: 255 AQTEDLFRRYKRGW 268
           AQTEDLFRRYK+GW
Sbjct: 301 AQTEDLFRRYKQGW 314

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514343|gb|AFK45233.1| unknown [Lotus japonicus]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/268 (73%), Positives = 232/268 (86%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MGVSNNITAVLNFIA+L SIPIIASGIWLAS PDN+CI  FRWP+V++G+L+LLVSL GF
Sbjct: 1   MGVSNNITAVLNFIAMLSSIPIIASGIWLASNPDNQCITNFRWPIVIIGLLILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GAYW K+ LLA YL  MA+LI LLL++LVFAFVVT+PDGSY VPGR YKEY LD+FSSW
Sbjct: 61  VGAYWNKQGLLALYLFSMALLIALLLILLVFAFVVTKPDGSYDVPGRGYKEYTLDRFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR+HV  S +W KIR CLA +D C  L++ Y+T DQF ++H+SPLQ+ CCKPPT CG+++
Sbjct: 121 LRNHVTGSGSWRKIRPCLAASDVCINLARNYITPDQFLNSHLSPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           V+P LW NPVNP  DPDC LW+NDQ+QLCYNC++CKAGLLGNLR EWRKANIILIVAVV+
Sbjct: 181 VSPILWTNPVNPMADPDCNLWNNDQNQLCYNCNTCKAGLLGNLRKEWRKANIILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LI VY+IACSAFKNAQTEDLF RYK+GW
Sbjct: 241 LICVYIIACSAFKNAQTEDLFDRYKQGW 268

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523882|ref|XP_003530563.1| PREDICTED: uncharacterized protein LOC100815633 [Glycine max]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/268 (76%), Positives = 235/268 (87%)

Query: 1   MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
           MGVSNNITAVLN IA L SIPIIASGIWLASKPDNEC+  FRWP+V++G+L+LLVSL GF
Sbjct: 1   MGVSNNITAVLNLIATLASIPIIASGIWLASKPDNECVANFRWPIVIIGILILLVSLAGF 60

Query: 61  IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
           +GAYW K+ LLA YL  MA+LI LLL+VLVFAFVVTRPDG+Y VPGR YKEYRL  FSSW
Sbjct: 61  VGAYWNKQGLLALYLFCMALLIALLLLVLVFAFVVTRPDGAYDVPGRGYKEYRLHGFSSW 120

Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
           LR+HV  S +W KIR CLA +D CSKL+Q Y+TADQFF++HISPLQ+ CCKPPT CG++Y
Sbjct: 121 LRNHVTGSGSWQKIRPCLAASDVCSKLTQDYITADQFFNSHISPLQSGCCKPPTACGYNY 180

Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
           VNP LW NPVNP  D DC+LW+NDQ+QLCYNC++CKAGLLGNLR EWRKANIILIVAVV+
Sbjct: 181 VNPILWTNPVNPMADSDCYLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVVV 240

Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGW 268
           LIWVY+IACSAF+NAQTE+LF RYK+GW
Sbjct: 241 LIWVYVIACSAFRNAQTENLFDRYKQGW 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.996	0.992	0.620	6.1e-94
TAIR|locus:2178570	269	TRN2 "AT5G46700" [Arabidopsis	1.0	1.0	0.431	1.8e-62
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.959	0.945	0.369	7.7e-48
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.851	0.803	0.408	7.7e-48
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.936	0.770	0.344	1.6e-45
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.933	0.954	0.339	7.3e-43
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.955	0.944	0.318	2.1e-38
TAIR|locus:2099272	282	TET6 "AT3G12090" [Arabidopsis	0.895	0.854	0.343	1.7e-36
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.940	0.933	0.330	1.3e-34
TAIR|locus:2038488	284	TET10 "tetraspanin10" [Arabido	0.843	0.799	0.314	3.6e-34

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
 Identities = 167/269 (62%), Positives = 197/269 (73%)

Query:     1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGF 60
             M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWP           S  GF
Sbjct:     1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query:    61 IGAYWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSW 120
             IGAY YKETLLA YLC M                 TRPDGSY VPGR YKEYRL+ FS+W
Sbjct:    61 IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query:   121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH-ISPLQARCCKPPTICGFS 179
             L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFFS+  I+PLQ+ CCKPPT CG++
Sbjct:   121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query:   180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXXX 239
             +VNPTLWLNP N   D DC+LWSNDQSQLCYNC+SCKAGLLGNLR EWRK          
Sbjct:   181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query:   240 XXXXXXXXXCSAFKNAQTEDLFRRYKRGW 268
                      CSAF+NAQTEDLFR+YK+GW
Sbjct:   241 VLIWVYVIACSAFRNAQTEDLFRKYKQGW 269

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2178570 TRN2 "AT5G46700" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 116/269 (43%), Positives = 152/269 (56%)

Query:     1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGF 60
             M +SNN+   +NFI +L SIP+I +GIWLA    N C+ L +WP            L GF
Sbjct:     1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query:    61 IGAYWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSW 120
             IG +W    LL  YL  M                 T     +  P RAY EY L  FS W
Sbjct:    61 IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query:   121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
             LR  V  S  W +IR CL+ T  C +L+Q+Y  A  FF+AH+ P+Q+ CCKPPT CGF++
Sbjct:   121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query:   181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXXXX 240
             VNPT W++P++ + D DC  WSNDQ+ LCY C SCKAGLL N++ +W K           
Sbjct:   181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query:   241 XXXXXXXXCSAFKNAQTEDLFRRYKRGWT 269
                     C AF+NA+TED+FR+YK+G+T
Sbjct:   241 LIIVYIIGCCAFRNAETEDIFRKYKQGYT 269

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0010015 "root morphogenesis" evidence=RCA;IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 98/265 (36%), Positives = 136/265 (51%)

Query:     4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGFIGA 63
             SNN+  +LNF+  L SIPI+A GIWL+ K   EC      P           ++ G IG+
Sbjct:     5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query:    64 YWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                   LL  YL VM                 T       + G+ YKEY+L  +S+WL+ 
Sbjct:    65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query:   124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTA--DQFFSAHISPLQARCCKPPTICGFSYV 181
              V + KNWNKIR+CL ++  CSKL  ++V    + F+  H++ LQ+ CCKP   CGF YV
Sbjct:   125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query:   182 NPTLWLNPVNPTG---DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXX 238
             NPT W    N TG   +PDC  W N + +LC++C SCKAGLL N+++ W+K         
Sbjct:   185 NPTTWTK--NTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFL 242

Query:   239 XXXXXXXXXXCSAFKNAQTEDLFRR 263
                       C AF+N + +D + R
Sbjct:   243 VFLIIVYSVGCCAFRNNKRDDSYSR 267

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 96/235 (40%), Positives = 130/235 (55%)

Query:     1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPXXXXXXXXXXXSLCG 59
             M  SN++  ++NF+  L SIPI+  GIWL+S+ ++ +C+   +WP           SL G
Sbjct:     1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query:    60 FIGAYWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSS 119
             F GA +  + L+  YL VM                 T       V  R Y +Y L+ +S 
Sbjct:    61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query:   120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQARCCKPPTI 175
             WL+D V D   W KI +CL D+  C K+ + +     TAD FF   +SP+++ CCKPPT 
Sbjct:   121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query:   176 CGFSYVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRK 229
             CGFSYVN T W       G + DC +WSNDQS LCY CSSCKAG+LG+L+  WRK
Sbjct:   181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRK 235

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 89/258 (34%), Positives = 134/258 (51%)

Query:     5 NNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPXXXXXXXXXXXSLCGFIGA 63
             +N+  ++NF   L SIPI+  GIWL+S+ ++ +C+   +WP           SL G  GA
Sbjct:     5 SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query:    64 YWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
              +  + L+  YL  M                 T      +V  R Y +Y L+ +S WL+D
Sbjct:    65 CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query:   124 HVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQARCCKPPTICGFS 179
              V D+  W  I +C+ D+  C K+ +       TA  F+  ++SP+++ CCKPPT CG++
Sbjct:   125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query:   180 YVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXX 238
             YVN T+W+      G +PDC LW+NDQ  LCY CSSCKAG+LG+L+  WRK         
Sbjct:   185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

Query:   239 XXXXXXXXXXCSAFKNAQ 256
                       C+A++N +
Sbjct:   245 IILVIFYVIACAAYQNVK 262

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 86/253 (33%), Positives = 121/253 (47%)

Query:     4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGFIGA 63
             SNN+  +LNF   L SIPI+++GIWL      EC      P           S+ G +GA
Sbjct:     5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64

Query:    64 YWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                   LL  YL  M                 T       +  R YKEY +  +S+WL+ 
Sbjct:    65 CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124

Query:   124 HVVDSKNWNKIRACLADTDTCSKLSQQY--VTADQFFSAHISPLQARCCKPPTICGFSYV 181
              V ++KNW +IR+CL  +D CS    +Y  +  + F+ ++++ LQ+ CCKP   C F+YV
Sbjct:   125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYV 184

Query:   182 NPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXXXXX 241
             NPT W     P  + DC +W N    LCY+C +CKAGLL N++N W+K            
Sbjct:   185 NPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFL 244

Query:   242 XXXXXXXCSAFKN 254
                    C AF+N
Sbjct:   245 IIVYSVGCCAFRN 257

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 84/264 (31%), Positives = 128/264 (48%)

Query:     4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGFIGA 63
             SN++  +LNF   L S+PI+++GIWL+ K   +C      P           ++ G +G+
Sbjct:     5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64

Query:    64 YWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
                   LL  YL VM                 T       + G+AYKEYRL+ +S WL+ 
Sbjct:    65 CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124

Query:   124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQ----FFSAHISPLQARCCKPPTICGFS 179
              V ++K+WN IR+CL ++  C  L  + VTA+     F+   ++  ++ CCKP   C F+
Sbjct:   125 RVNNAKHWNSIRSCLYESKFCYNL--ELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFT 182

Query:   180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXXX 239
             Y+  T W        + DC LW N++ +LCYNC +CKAG L NL+  W++          
Sbjct:   183 YITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLV 242

Query:   240 XXXXXXXXXCSAFKNAQTEDLFRR 263
                      C AF+N + ED + R
Sbjct:   243 LLVVVYAMGCCAFRNNK-EDRYGR 265

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2099272 TET6 "AT3G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 87/253 (34%), Positives = 119/253 (47%)

Query:     4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGFIGA 63
             SN +  VLN + LL SIPII + ++ A +    C +  + P           SL GFIGA
Sbjct:     5 SNTVIGVLNLLTLLASIPIIGTALYKA-RSSTTCENFLQTPLLVIGFIILIVSLAGFIGA 63

Query:    64 YWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
              +     L  YL VM                 T   G   VPGR YKEYRL  +  WLR+
Sbjct:    64 CFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRE 123

Query:   124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNP 183
              V D + WN IR+C+  + TC+K+ + + T D +F   ++ +Q+ CCKPPT C +     
Sbjct:   124 RVRDPEYWNSIRSCILSSKTCTKI-ESWTTLD-YFQRDMTSVQSGCCKPPTACTYE---- 177

Query:   184 TLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXXXXXXXXXXX 243
                   V+  G  DCF W+N    LCY C +CKAG+L  +R +WRK              
Sbjct:   178 ---AGVVD--GGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIA 232

Query:   244 XXXXXCSAFKNAQ 256
                  C AF N +
Sbjct:   233 VYAAGCCAFHNTR 245

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 87/263 (33%), Positives = 124/263 (47%)

Query:     3 VSNNITAVLNFIALLCSIPIIASGIWL-ASKPDNECIHLFRWPXXXXXXXXXXXSLCGFI 61
             VSN +  + N + +L     I   I++   +   +C    R P           SL G I
Sbjct:     4 VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63

Query:    62 GAYWYKETL-LAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSW 120
             G+  +KE L +  YL ++                 T       V GR YKEYR   FS+W
Sbjct:    64 GSC-FKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW 122

Query:   121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQARCCKPPTICGF 178
             L   V   K W  IR+CLA+ + C  LS   V+  AD F+  ++SP+Q+ CCKPP+ C F
Sbjct:   123 LNGFV-GGKRWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNF 181

Query:   179 SYVNPTLWLNPV-NPTG---DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKXXXXX 234
              + N T W+ P  N T    + DC  WSN Q++LC+NC++CKAG+L N+R +WR      
Sbjct:   182 EFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFN 241

Query:   235 XXXXXXXXXXXXXXCSAFKNAQT 257
                           C A +N +T
Sbjct:   242 ICLLILLITVYSCGCCARRNNRT 264

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2038488 TET10 "tetraspanin10" [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 72/229 (31%), Positives = 121/229 (52%)

Query:     1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPXXXXXXXXXXXSLCGF 60
             MG S  +   +N + +L ++ +I  G+W+++  D  C     +P           S+ GF
Sbjct:     3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDG-CRRSLTFPVIALGGFIFLISIIGF 61

Query:    61 IGAYWYKETLLAFYLCVMXXXXXXXXXXXXXXXXXTRPDGSYYVPGRAYKEYRLDKFSSW 120
             +GA      LL  YL V+                 T     +  PG  YKEY+L+ +SSW
Sbjct:    62 LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121

Query:   121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSY 180
                 + ++ NW ++++CL  ++ C KLS++Y T  Q  SA ++P++A CC+PP+ CG+  
Sbjct:   122 FLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPA 181

Query:   181 VNPTLW-LNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWR 228
             VN + + L+  + + + DC L+ N ++  CYNC SCKAG+   ++ EWR
Sbjct:   182 VNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWR 230

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUN5	TET2_ARATH	No assigned EC number	0.7583	0.9962	0.9925	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	269
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	1e-27

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score =  105 bits (265), Expect = 1e-27
 Identities = 54/258 (20%), Positives = 92/258 (35%), Gaps = 46/258 (17%)

Query: 4   SNNITAVLNFIALLCSIPIIASGIWLASK-------PDNECIHLFRWPVVLLGVLVLLVS 56
              +  +LN + LL  + ++A GIWL            N+ I      +++LGV++LLV 
Sbjct: 2   LKYLLFLLNLLFLLLGLALLAVGIWLLVIAKDYLAIALNDSIRALYILIIVLGVIILLVG 61

Query: 57  LCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDK 116
             G  GA      LL  Y  ++ IL +L +   + AFV      S    G          
Sbjct: 62  FLGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYRDKLESSLKEGL--------- 112

Query: 117 FSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTIC 176
             ++      D  N  +    L  +                           CC    + 
Sbjct: 113 --NYKDKSYNDDPNLTEAIDELQKSL-------------------------ECCG---VN 142

Query: 177 GFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIV 236
            ++    + + +P +   D DC  W+ND S L      CK  LL  L+   +    + + 
Sbjct: 143 SYTDWLDSQYFSPSSSNPDSDCCCWNNDTSNLNIYTEGCKEKLLEFLKKNLKIIGGVGLG 202

Query: 237 AVVILIWVYLIACSAFKN 254
             VI +   ++AC   ++
Sbjct: 203 IAVIQLLGIILACCLCRS 220

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
KOG3882	237	consensus Tetraspanin family integral membrane pro	100.0
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.89
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	98.31
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	98.23
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	98.15
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	98.13
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	98.11
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	98.08
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	98.04
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	98.01
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	97.98
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	97.96
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	97.9
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	97.89
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	97.89
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	97.77
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	97.76
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	97.72
cd03151	84	CD81_like_LEL Tetraspanin, extracellular domain or	91.71
PRK12585	197	putative monovalent cation/H+ antiporter subunit G	85.54
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	84.36
PF05915	115	DUF872: Eukaryotic protein of unknown function (DU	82.46

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=100.00  E-value=2.2e-33  Score=248.10  Aligned_cols=217  Identities=18%  Similarity=0.286  Sum_probs=164.8

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccch-----hh--hhHHHHHHHHHHHHHHhhhhhhhccchhhHHHH
Q 024319            2 GVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIH-----LF--RWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFY   74 (269)
Q Consensus         2 ~~~k~~l~~~n~l~~l~G~~ll~~Gi~~~~~~~~~~~~-----~~--~~pli~~G~~~~~vs~~Gc~Ga~~es~~lL~~y   74 (269)
                      ++.||+++++|+++|++|++++++|+|+..++.. ...     +.  .+.+|++|++++++|++||+||.|||+|+|.+|
T Consensus         7 ~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~-~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y   85 (237)
T KOG3882|consen    7 SCLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGF-LSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSY   85 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhheeEeccc-hhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHH
Confidence            5899999999999999999999999999988642 112     11  233899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhheeecCCCcccccCcchhhhhhhhhhHHHhhhccCc---cchHHHHhhhhcCCcccccccCC
Q 024319           75 LCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHVVDS---KNWNKIRACLADTDTCSKLSQQY  151 (269)
Q Consensus        75 ~~~l~ll~~~el~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~wl~~~~~~~---~~W~~iq~cl~~~~~Ccg~~~~~  151 (269)
                      ++++++++++|+++++++++++++.....      ++   +..++-.+.+-+++   +.||.+|.    +++|||.++  
T Consensus        86 ~~~l~l~~i~e~~~~i~~~~~~~~l~~~~------~~---~~~~~~~~~y~~~~~~~~~~d~~Q~----~~~CCG~~~--  150 (237)
T KOG3882|consen   86 FILLLLLFIAELAAGILAFVFRDSLRDEL------EE---QLLKSIWNNYSSDPDLGEAWDKLQR----ELKCCGVNG--  150 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhheeHHHHHHHH------HH---HHHHHHHHHhCCCccHHHHHHHHHH----hccCCcCCC--
Confidence            99999999999999999999877643211      10   11111111121122   47999875    899999986  


Q ss_pred             CChhhhhhhcCCccCccccCCCCC-CCCcCCCCccccCCCCCCCCCCCCCccccCccccccCcchHHHHHHHHHHhhHHH
Q 024319          152 VTADQFFSAHISPLQARCCKPPTI-CGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKA  230 (269)
Q Consensus       152 ~~~~d~~~~~~~~vp~sCC~~p~~-Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~~~~lCy~c~~Ck~~i~~~l~~~~~~i  230 (269)
                        +.||......++|+|||++... ...               .+.+..          ...+||.+++.++++++...+
T Consensus       151 --~~~~~~~~~~~vP~SCC~~~~~~~~~---------------~~~~~~----------~~~~GC~~~~~~~~~~~~~~i  203 (237)
T KOG3882|consen  151 --YSDYFNCSSNNVPPSCCKRTRRQKFP---------------QDVPDN----------IYTEGCLEKLSSWLESNLLII  203 (237)
T ss_pred             --chHHhcCCCCCCCcccCCCccccccc---------------ccchhh----------hhccccHHHHHHHHHHhhHHH
Confidence              4788654332299999987111 000               000001          124788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhchhhhh
Q 024319          231 NIILIVAVVILIWVYLIACSAFKNAQTEDLF  261 (269)
Q Consensus       231 ~~~~i~v~~~~i~~~~~ac~l~r~~~~~~~~  261 (269)
                      ++++++++++|++++++|+++.+.+++.+..
T Consensus       204 ~~~~~~i~~~~~~~~~~a~~l~~~i~~~~~~  234 (237)
T KOG3882|consen  204 GGVGLGIAVLELLGMILACCLANAIRNQRDR  234 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999998887633

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.89  E-value=3.4e-24  Score=182.96  Aligned_cols=211  Identities=24%  Similarity=0.377  Sum_probs=36.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCc-----cchhhhhHHHHHHHHHHHHHHhhhhhhhccchhhHHHHHH
Q 024319            3 VSNNITAVLNFIALLCSIPIIASGIWLAS-KPDNE-----CIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLC   76 (269)
Q Consensus         3 ~~k~~l~~~n~l~~l~G~~ll~~Gi~~~~-~~~~~-----~~~~~~~pli~~G~~~~~vs~~Gc~Ga~~es~~lL~~y~~   76 (269)
                      |+|+++.++|++++++|++++++|+|+.. ....+     ........++.+|+++++++++|++|+.+||++++..|.+
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~   80 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYII   80 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Confidence            67999999999999999999999999942 21111     1111223367799999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhheeecCCCcccccCcchhhhhhhhhhHHHhhhc----cCccchHHHHhhhhcCCcccccccCCC
Q 024319           77 VMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRDHV----VDSKNWNKIRACLADTDTCSKLSQQYV  152 (269)
Q Consensus        77 ~l~ll~~~el~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~wl~~~~----~~~~~W~~iq~cl~~~~~Ccg~~~~~~  152 (269)
                      ++++++++|+++++.++.++++....      .+    ++++.+.++..    ...+.||.+|    ++++|||.++   
T Consensus        81 ~~~~~~v~~~~~~i~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~iq----~~~~CCG~~~---  143 (221)
T PF00335_consen   81 LLILLFVLELVVGIVAFSYRDQLNSS------LK----DGLSLRCMKSYNSNESFSEAWDNIQ----EKFECCGVNS---  143 (221)
T ss_dssp             -------------------HHHHHHH------HH----HHHHHHHHHSSTT-CHHHHHHHHHH----HHHT--SSTT---
T ss_pred             chhhHHHHHHHHHHhhhhcccccccc------cc----ccccchhhhccccccchhhheeccc----ccccccCCCC---
Confidence            99999999999999999986642111      00    00001111111    2345566665    5899999876   


Q ss_pred             ChhhhhhhcCCccCccccCCCCCCCCcCCCCccccCCCCCCCCCCCCCccccCccccccCcchHHHHHHHHHHhhHHHHH
Q 024319          153 TADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANI  232 (269)
Q Consensus       153 ~~~d~~~~~~~~vp~sCC~~p~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~~~~lCy~c~~Ck~~i~~~l~~~~~~i~~  232 (269)
                       +.||......+ +++...++. +                      ..+..+.+......+||++++.++++++...+++
T Consensus       144 -~~d~~~~~~~~-~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~gC~~~l~~~~~~~~~~~~~  198 (221)
T PF00335_consen  144 -PDDWFTSKWSS-CSSPDSCPD-C----------------------QCPDDCSSENSIYTRGCYDKLREYLRSYLKYIGI  198 (221)
T ss_dssp             -CHHHHHHHHHT-----------T----------------------CS-TTCCCCHCCTST-HHHHHHHHHCT-------
T ss_pred             -Ccccccccccc-ccccccccc-c----------------------cccccccccccccCCChHHHHHHHHHHHHHHHHH
Confidence             67775432111 111100000 0                      0011111113345689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhh
Q 024319          233 ILIVAVVILIWVYLIACSAFKNA  255 (269)
Q Consensus       233 ~~i~v~~~~i~~~~~ac~l~r~~  255 (269)
                      ++++++++|++++++++++.|++
T Consensus       199 ~~~~~~~l~~~~~~~a~~l~~~~  221 (221)
T PF00335_consen  199 VSLAILVLQLIGIILACCLCRHI  221 (221)
T ss_dssp             -----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999998864

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=98.31  E-value=7.4e-07  Score=68.09  Aligned_cols=66  Identities=15%  Similarity=0.156  Sum_probs=40.2

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCcccc-CCCCCCCCcCCCCccccCCCCCCCCCCCCCccccCc
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCC-KPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQS  206 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sCC-~~p~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~~~  206 (269)
                      ++.||.+|.    +++|||.++    +.||+.   ..+|.||| .++..|+..  +              .+.. .+   
T Consensus        34 ~~~~d~lQ~----~l~CCG~~~----~~d~~~---~~vP~SCcc~~~~~c~~~--~--------------~~~~-~~---   82 (100)
T cd03154          34 KKSLEKFQK----ELKCCGLVN----GADDWG---NDIPASCNCTTTQSDCVV--A--------------YYGG-SN---   82 (100)
T ss_pred             HHHHHHHHH----cCCCCCCCC----chhhcc---CCCCCCCcCCCCCCCccc--c--------------cCCC-cC---
Confidence            467888875    899999875    344432   36899995 344445310  0              0000 01   


Q ss_pred             cccccCcchHHHHHHHHHHhh
Q 024319          207 QLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       207 ~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                         +.-+||..++.++++++.
T Consensus        83 ---~~~~GC~~~i~~~~~~~~  100 (100)
T cd03154          83 ---VYKEPCISKIKDFLKKNL  100 (100)
T ss_pred             ---ccccccHHHHHHHHHhhC
Confidence               112578899999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=98.23  E-value=1.9e-06  Score=66.34  Aligned_cols=68  Identities=18%  Similarity=0.334  Sum_probs=43.4

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc------CCccCccccCCCC-CCCCcCCCCccccCCCCCCCCCCCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH------ISPLQARCCKPPT-ICGFSYVNPTLWLNPVNPTGDPDCFL  200 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~------~~~vp~sCC~~p~-~Cg~~~~n~t~w~~~~~~~~~~dC~~  200 (269)
                      +..||.+|.    .++|||.++    +.||....      ..+||.|||..+. .|+-....                  
T Consensus        30 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~vP~SCC~~~~~~C~~~~~~------------------   83 (105)
T cd03163          30 SRAVDYLQR----QLQCCGIHN----YTDWENTPWFKESKNNSVPLSCCKETFTSCTGSLTQ------------------   83 (105)
T ss_pred             HHHHHHHHH----hCcccCCCC----HHHHhhchhhhcCCCCccCcCccCCCCCCcccCCCC------------------
Confidence            578888875    899999876    67774210      2469999996542 46321000                  


Q ss_pred             ccccCccccccCcchHHHHHHHHHHhh
Q 024319          201 WSNDQSQLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       201 ~~n~~~~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                      ..+     -| -+||..++.++++++.
T Consensus        84 ~~~-----i~-~~GC~~~~~~~~~~~~  104 (105)
T cd03163          84 PKD-----LY-QEGCEAKLVKKLQEVM  104 (105)
T ss_pred             CCc-----hh-hhccHHHHHHHHHHHh
Confidence            000     01 1588899999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=98.15  E-value=3.3e-06  Score=64.69  Aligned_cols=73  Identities=12%  Similarity=0.264  Sum_probs=45.2

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc---CCccCccccCCCCCCCCcCCCCccccCCCCCCCCCCCCCcccc
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH---ISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSND  204 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~---~~~vp~sCC~~p~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~  204 (269)
                      +..||.+|.    .++|||.++    +.||....   ..++|.|||+....|+....+.     +.    .    ...+ 
T Consensus        29 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~vP~SCC~~~~~C~~~~~~~-----~~----~----~~~~-   86 (104)
T cd03161          29 SDAVDTVQR----TLHCCGVEN----YTDWLNSPYFLEKGIPLSCCKNRSDCSPQDLKN-----LT----K----AATK-   86 (104)
T ss_pred             HHHHHHHHh----cCcCcCCCC----hhhhhccccccCCCcCcccccCCCCCCcccccc-----cc----c----cccc-
Confidence            457888875    899999875    67775321   2369999998665675421100     00    0    0001 


Q ss_pred             CccccccCcchHHHHHHHHHHhh
Q 024319          205 QSQLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       205 ~~~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                         . | -+||..++.++++++.
T Consensus        87 ---i-~-~~GC~~~~~~~~~~n~  104 (104)
T cd03161          87 ---V-Y-QQGCFTLVTSFMEANM  104 (104)
T ss_pred             ---c-c-hhccHHHHHHHHHHhC
Confidence               1 1 1688899999999863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=98.13  E-value=5.9e-06  Score=61.39  Aligned_cols=58  Identities=16%  Similarity=0.369  Sum_probs=43.3

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCccccCCCCCCCCcCCCCccccCCCCCCCCCCCCCccccCcc
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKPPTICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQSQ  207 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sCC~~p~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~~~~  207 (269)
                      +..||.+|.    +++|||.++    +.||.    ..+|+|||+.+  |                      ..+      
T Consensus        29 ~~~~d~iQ~----~l~CCG~~~----~~Dw~----~~vP~SCC~~~--~----------------------~~~------   66 (86)
T cd03164          29 SEAWDMIQS----NLQCCGING----TTDWG----SGVPSSCCSSD--T----------------------EYK------   66 (86)
T ss_pred             HHHHHHHHH----HhcCCCCCC----hhhhC----CCCChhhcCCC--C----------------------ccc------
Confidence            567888875    899999875    77883    36899998531  1                      011      


Q ss_pred             ccccCcchHHHHHHHHHHhhHHHH
Q 024319          208 LCYNCSSCKAGLLGNLRNEWRKAN  231 (269)
Q Consensus       208 lCy~c~~Ck~~i~~~l~~~~~~i~  231 (269)
                          -+||..++.++++++..++|
T Consensus        67 ----~~GC~~~~~~~~~~~~~iig   86 (86)
T cd03164          67 ----VEGCYKKLKNWFESNFLYTG   86 (86)
T ss_pred             ----cccHHHHHHHHHHHHHHHhC
Confidence                15888999999999998775

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=98.11  E-value=2.8e-06  Score=66.76  Aligned_cols=77  Identities=12%  Similarity=0.218  Sum_probs=43.8

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc------CCccCccccCCCCC-CCCcCCCCccccCCCCCCCCCCCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH------ISPLQARCCKPPTI-CGFSYVNPTLWLNPVNPTGDPDCFL  200 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~------~~~vp~sCC~~p~~-Cg~~~~n~t~w~~~~~~~~~~dC~~  200 (269)
                      +..||.+|.    .++|||.++    +.||....      ..+||.|||.+... ++..             ....+|..
T Consensus        33 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~vP~SCC~~~~~~~~~~-------------~~~~~C~~   91 (117)
T cd03160          33 EEAWDYVQF----QLQCCGWTG----PQDWTDNSLIKNSSEPLYPCSCCNSSATADSPR-------------PSKGFCEA   91 (117)
T ss_pred             HHHHHHHHh----hCcccCCCC----chhHHhchhccCCCCCCCCHhhhcCCccccccC-------------CCCcccCC
Confidence            457888874    899999876    66774211      12699999975421 1110             01122421


Q ss_pred             ccccCccccccCcchHHHHHHHHHHhh
Q 024319          201 WSNDQSQLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       201 ~~n~~~~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                      -..... .-| -.||..++.++++++.
T Consensus        92 ~~~~~~-~iy-~~GC~~~l~~~~~~n~  116 (117)
T cd03160          92 PASLDW-PVY-QEGCMEKLQSWLNENL  116 (117)
T ss_pred             CCcccc-chH-HHhhHHHHHHHHHHhc
Confidence            110000 012 2588899999999875

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=98.08  E-value=4.8e-06  Score=66.12  Aligned_cols=38  Identities=18%  Similarity=0.328  Sum_probs=26.7

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhh-c---------CCccCccccCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSA-H---------ISPLQARCCKPP  173 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~-~---------~~~vp~sCC~~p  173 (269)
                      +..||.+|.    .++|||.++    +.||... .         ..+||.|||+++
T Consensus        29 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~   76 (120)
T cd03167          29 RFLIDQVQL----GLQCCGASS----YQDWQQNLYFNCSSPGVQACSLPASCCIDP   76 (120)
T ss_pred             HHHHHHHHH----hccCCCCCC----hHHhcccccccCCCCCCCCCCCCcCccCCC
Confidence            457999875    899999886    5666421 1         125999999754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=98.04  E-value=5.8e-06  Score=65.34  Aligned_cols=39  Identities=8%  Similarity=0.131  Sum_probs=26.9

Q ss_pred             CccchHHHHhhhhcCCcccccccCCCChhhhhhh----------cCCccCccccCCC
Q 024319          127 DSKNWNKIRACLADTDTCSKLSQQYVTADQFFSA----------HISPLQARCCKPP  173 (269)
Q Consensus       127 ~~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~----------~~~~vp~sCC~~p  173 (269)
                      .+..||.+|.    .++|||+++    +.||...          ...+||.|||++.
T Consensus        28 ~~~~~d~lQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~   76 (119)
T cd03158          28 LQNIIDFVQK----EFKCCGGDD----YRDWSKNMYFNCSSPNPEACGVPYSCCIRA   76 (119)
T ss_pred             HHHHHHHHHH----HccCCCCCC----hhhcccccccccCCCCCcCCCcCcCcccCC
Confidence            3567888875    899999886    5566411          0125999999754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=98.01  E-value=5.6e-06  Score=64.27  Aligned_cols=39  Identities=23%  Similarity=0.623  Sum_probs=28.8

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhh---------cCCccCccccCCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSA---------HISPLQARCCKPPT  174 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~---------~~~~vp~sCC~~p~  174 (269)
                      +..||.+|.    .++|||+++    +.||...         ...++|.|||+++.
T Consensus        32 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~~~~vP~SCC~~~~   79 (114)
T cd03156          32 TSTWNRVMI----ELKCCGVNG----PTDFVDSTSFFRQKNEPNSPYPESCCKRNS   79 (114)
T ss_pred             HHHHHHHHh----cccCcCCCC----cHHHHhhhHHhccCCCCCCcCCHHHcCccc
Confidence            567999875    899999886    6677432         23579999997543

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=97.98  E-value=7.5e-06  Score=62.35  Aligned_cols=67  Identities=13%  Similarity=0.317  Sum_probs=43.1

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhh---cCCccCccccCCC-CCCCCcCCCCccccCCCCCCCCCCCCCccc
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSA---HISPLQARCCKPP-TICGFSYVNPTLWLNPVNPTGDPDCFLWSN  203 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~---~~~~vp~sCC~~p-~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n  203 (269)
                      +..||.+|.    .++|||+++    +.||...   ...++|.|||..+ ..|+.... .                  .+
T Consensus        29 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~vP~SCC~~~~~~C~~~~~-~------------------~~   81 (99)
T cd03166          29 RKILDRMQK----DLKCCGANN----YTDWENIPSLDTDSVPDSCCINVTKGCGINFD-E------------------KV   81 (99)
T ss_pred             HHHHHHHHH----HhcccCCCC----hhhhhcccCCCCCCCCcCccCcCCCCcccCCC-c------------------cc
Confidence            567999875    899999886    6677532   1246999999643 34532100 0                  00


Q ss_pred             cCccccccCcchHHHHHHHHHHhh
Q 024319          204 DQSQLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       204 ~~~~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                           -| -+||..++.++++++.
T Consensus        82 -----~y-~~GC~~~~~~~~~~~~   99 (99)
T cd03166          82 -----IH-LEGCVTKIEGWLKKNI   99 (99)
T ss_pred             -----hH-HhcCHHHHHHHHHHhC
Confidence                 01 1588899999999863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=97.96  E-value=1e-05  Score=62.74  Aligned_cols=69  Identities=19%  Similarity=0.338  Sum_probs=42.6

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc--------CCccCccccCCCC-CCCCcCCCCccccCCCCCCCCCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH--------ISPLQARCCKPPT-ICGFSYVNPTLWLNPVNPTGDPDC  198 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~--------~~~vp~sCC~~p~-~Cg~~~~n~t~w~~~~~~~~~~dC  198 (269)
                      +..||.+|.    .++|||.++    +.||....        ...||.|||+... .|+.....+               
T Consensus        32 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~~~vP~SCC~~~~~~c~~~~~~~---------------   88 (110)
T cd03155          32 TLTVDELQQ----EFKCCGSNN----YTDWQDSEWINSNEANGRLVPDSCCKTVVDRCGCLRDHP---------------   88 (110)
T ss_pred             HHHHHHHHH----hCcCcCCCC----hhhhhhccccccCCCCCCCCCccccCCCCCCcccccCCh---------------
Confidence            567888875    899999886    67775321        1369999997532 353100000               


Q ss_pred             CCccccCcccccc-CcchHHHHHHHHHHhh
Q 024319          199 FLWSNDQSQLCYN-CSSCKAGLLGNLRNEW  227 (269)
Q Consensus       199 ~~~~n~~~~lCy~-c~~Ck~~i~~~l~~~~  227 (269)
                         .+     -|. -.||..++.+++++++
T Consensus        89 ---~~-----~~~~~~GC~~~~~~~~~~~~  110 (110)
T cd03155          89 ---SN-----IYKVEGGCIPKLEDFLYDHL  110 (110)
T ss_pred             ---hc-----cccccCChHHHHHHHHHHhC
Confidence               00     111 1478899999999873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=97.90  E-value=1.2e-05  Score=61.02  Aligned_cols=66  Identities=14%  Similarity=0.421  Sum_probs=43.0

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhh-cCCccCccccCCC-CCCCCcCCCCccccCCCCCCCCCCCCCccccC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSA-HISPLQARCCKPP-TICGFSYVNPTLWLNPVNPTGDPDCFLWSNDQ  205 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~-~~~~vp~sCC~~p-~~Cg~~~~n~t~w~~~~~~~~~~dC~~~~n~~  205 (269)
                      +..||.+|.    .++|||.++    +.||... ....+|.|||++. ..|+..   .             .    .+  
T Consensus        31 ~~~~d~~Q~----~l~CCG~~~----~~Dw~~~~~~~~vP~SCC~~~~~~C~~~---~-------------~----~~--   80 (98)
T cd03165          31 TNAWDITQT----EFRCCGVTN----YTDWYEVLGENRVPDSCCQEDSQDCGRN---P-------------T----EL--   80 (98)
T ss_pred             HHHHHHHHH----hCcCcCCCC----hhHHHHhcCCCCCCHhhcCCCccccccC---C-------------c----cc--
Confidence            457888875    899999876    6788532 1246899999643 245311   0             0    00  


Q ss_pred             ccccccCcchHHHHHHHHHHhh
Q 024319          206 SQLCYNCSSCKAGLLGNLRNEW  227 (269)
Q Consensus       206 ~~lCy~c~~Ck~~i~~~l~~~~  227 (269)
                        . | -+||..++.++++++.
T Consensus        81 --~-~-~~GC~~~~~~~~~~~~   98 (98)
T cd03165          81 --W-W-KTGCYEKVQQWLVDNL   98 (98)
T ss_pred             --h-H-HhhhHHHHHHHHHhcC
Confidence              0 1 1688899999999863

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=97.89  E-value=1.5e-05  Score=63.09  Aligned_cols=37  Identities=11%  Similarity=0.165  Sum_probs=26.4

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc------------CCccCccccCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH------------ISPLQARCCKP  172 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~------------~~~vp~sCC~~  172 (269)
                      +..||.+|.    .++|||.++    +.||....            ..+||.|||.+
T Consensus        29 ~~~~D~iQ~----~l~CCG~~~----~~DW~~~~~~~~~~~~~~~~~~~vP~SCC~~   77 (121)
T cd03159          29 QNLIDFLQE----YWQCCGARG----PDDWNLNIYFNCTDSNPSRERCGVPFSCCVK   77 (121)
T ss_pred             HHHHHHHHH----hccCCCCCC----hHHhcccccccccCCCCCCCCCCCCcccccC
Confidence            578999875    899999886    66774210            12499999963

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=97.89  E-value=2.9e-05  Score=60.25  Aligned_cols=42  Identities=14%  Similarity=0.422  Sum_probs=29.4

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhc-CCccCccccCCCC-CCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAH-ISPLQARCCKPPT-ICG  177 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~-~~~vp~sCC~~p~-~Cg  177 (269)
                      ++.||.+|.    .++|||+++    +.||.... ...+|.|||+++. .|+
T Consensus        32 ~~~~D~iQ~----~l~CCG~~~----~~DW~~~~~~~~vP~SCC~~~~~~C~   75 (103)
T cd03157          32 THAWNSFQT----EFKCCGVIY----FTDWLEMTEMEWPPDSCCSNQYPGCA   75 (103)
T ss_pred             HHHHHHHHH----hccCccCCC----hhHHhccCCCCCCCccccCCCCCCcC
Confidence            457999875    899999886    67775321 1348999997543 564

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=97.77  E-value=4.3e-05  Score=56.33  Aligned_cols=37  Identities=14%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             CccchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCccccCC
Q 024319          127 DSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKP  172 (269)
Q Consensus       127 ~~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sCC~~  172 (269)
                      .+..||.+|.    +++|||.++    +.||.. ....+|+|||.+
T Consensus        28 ~~~~~d~iq~----~l~CCG~~~----~~D~~~-~~~~vP~SCc~~   64 (90)
T cd03127          28 FQEAMDALQS----TFECCGVNG----PTDYLD-LRLLVPSSCCKG   64 (90)
T ss_pred             HHHHHHHHHH----hCcCcCCCC----hHHHcc-CCCCCCHhhcCC
Confidence            3567888875    899999876    678853 235789999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=97.76  E-value=2.7e-05  Score=63.93  Aligned_cols=76  Identities=17%  Similarity=0.412  Sum_probs=45.1

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhh-----h----------------------cCCccCccccCC--CCCCCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFS-----A----------------------HISPLQARCCKP--PTICGF  178 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~-----~----------------------~~~~vp~sCC~~--p~~Cg~  178 (269)
                      +..||.+|.    +++|||.++    +.||..     .                      ....||-|||.|  |..|..
T Consensus        34 ~~~~D~lQ~----~fkCCG~~~----y~DW~~~~w~~n~y~~~~~~~~~~~~~~~~~~~~~~~~vP~SCc~~~~~~~C~~  105 (143)
T cd03162          34 KKTIDMLQI----EFQCCGNNG----YRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLTDGVPFSCCNPSSPRPCIQ  105 (143)
T ss_pred             HHHHHHHHH----hccCCCCCC----hhhhhhhhhhcccccCCCccchhhhhhcccccccccCCcCCcccCCCCCCchhh
Confidence            456888875    899999875    445531     1                      124789999975  446765


Q ss_pred             cCC-CCccccCCCCCC---CCCCCCCccccCccccccCcchHHHHHHHHHHh
Q 024319          179 SYV-NPTLWLNPVNPT---GDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNE  226 (269)
Q Consensus       179 ~~~-n~t~w~~~~~~~---~~~dC~~~~n~~~~lCy~c~~Ck~~i~~~l~~~  226 (269)
                      ... |..     ++..   ...+...|          -+||++++++++.+.
T Consensus       106 ~~~~~~~-----a~~~~~~~~~~~~i~----------~~GC~~~l~~~~~~~  142 (143)
T cd03162         106 HQITDNS-----AHYNYDYQTEELNLW----------TRGCREALLEYYTSK  142 (143)
T ss_pred             hcccccc-----cccccccCcccccch----------HHHHHHHHHHHHHhc
Confidence            211 110     0100   11222233          279999999998764

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=97.72  E-value=1.2e-05  Score=59.76  Aligned_cols=28  Identities=11%  Similarity=0.127  Sum_probs=21.5

Q ss_pred             cchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCcccc
Q 024319          129 KNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCC  170 (269)
Q Consensus       129 ~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sCC  170 (269)
                      ..||.+|.    +++|||.++    +.||      .+|+||+
T Consensus        32 ~~~d~iQ~----~l~CCG~~~----~~D~------~vP~SC~   59 (84)
T cd03152          32 ETLKAIHF----ALDCCGPTG----GLEQ------FVTDTCP   59 (84)
T ss_pred             HHHHHHHH----HHcCCCCCC----Cccc------ccCCCCC
Confidence            57888875    899999875    5666      3788873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

>cd03151 CD81_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily

Probab=91.71  E-value=0.14  Score=37.76  Aligned_cols=31  Identities=13%  Similarity=0.186  Sum_probs=20.1

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCccc
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARC  169 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sC  169 (269)
                      ++.||.+|.    ++.|||.++    +.|...   +++|.+|
T Consensus        31 ~~~~d~iQ~----~l~CCG~~~----~~d~~~---~~~~~~C   61 (84)
T cd03151          31 TAVLKTFHS----TLDCCGKGN----LTALLS---LLSTDLC   61 (84)
T ss_pred             HHHHHHHHH----hcCCCCCCC----CcchHH---HHHhCCC
Confidence            346888875    899999886    333221   4566677

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).

>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed

Probab=85.54  E-value=8.1  Score=33.24  Aligned_cols=54  Identities=13%  Similarity=0.056  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCccchh-hhhHHHHHHHHHHHHHHhhhh
Q 024319            8 TAVLNFIALLCSIPIIASGIWLASKPDNECIHL-FRWPVVLLGVLVLLVSLCGFI   61 (269)
Q Consensus         8 l~~~n~l~~l~G~~ll~~Gi~~~~~~~~~~~~~-~~~pli~~G~~~~~vs~~Gc~   61 (269)
                      +-++-.++.++|+.++.+|...+...++.+.+. .....-.+|+.++++|.++..
T Consensus         5 ~eiI~~vLLliG~~f~ligaIGLlRfPD~YtRLHAATKa~TLGv~LILlgv~l~~   59 (197)
T PRK12585          5 IEIIISIMILIGGLLSILAAIGVIRLPDVYTRTHAAGISNTFGVSLLLFATVGYF   59 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHhhccccchhhhHHHHHHHHHHHH
Confidence            445556777888888888877666654322222 112245666666666655543

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=84.36  E-value=2.1  Score=36.27  Aligned_cols=20  Identities=35%  Similarity=0.567  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 024319           10 VLNFIALLCSIPIIASGIWL   29 (269)
Q Consensus        10 ~~n~l~~l~G~~ll~~Gi~~   29 (269)
                      +.+++..++|+++++.|+-.
T Consensus         6 i~~i~~iilgilli~~gI~~   25 (191)
T PF04156_consen    6 IISIILIILGILLIASGIAA   25 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            34555555555555555543

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins

Probab=82.46  E-value=3.1  Score=32.85  Aligned_cols=48  Identities=19%  Similarity=0.321  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCccchhhhhHHHHHHHHHHHHHH
Q 024319            9 AVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSL   57 (269)
Q Consensus         9 ~~~n~l~~l~G~~ll~~Gi~~~~~~~~~~~~~~~~pli~~G~~~~~vs~   57 (269)
                      .++-++.+++|.+++.+|+.+....- +-...-.++++++|+++++=|+
T Consensus        44 I~la~~Lli~G~~li~~g~l~~~~~i-~~~~~~~~~llilG~L~fIPG~   91 (115)
T PF05915_consen   44 IALAVFLLIFGTVLIIIGLLLFFGHI-DGDRDRGWALLILGILCFIPGF   91 (115)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccc-CCCCcccchHHHHHHHHHhccH
Confidence            34455666788888888887776541 1111223578888888876554

The function of this currently unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	97.79

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=97.79  E-value=4.6e-06  Score=61.25  Aligned_cols=34  Identities=18%  Similarity=0.218  Sum_probs=25.8

Q ss_pred             ccchHHHHhhhhcCCcccccccCCCChhhhhhhcCCccCccccCC
Q 024319          128 SKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQARCCKP  172 (269)
Q Consensus       128 ~~~W~~iq~cl~~~~~Ccg~~~~~~~~~d~~~~~~~~vp~sCC~~  172 (269)
                      +..||.+|.    .+.|||.++    +.||..   .++|+|||.+
T Consensus        32 ~~~~d~iQ~----~l~CCG~~~----~~Dw~~---~~vP~ScC~~   65 (90)
T 1g8q_A           32 KAVVKTFHE----TLDCCGSST----LTALTT---SVLKNNLCPS   65 (90)
T ss_dssp             HHHHHHHHH----HHTCCSCTT----CGGGHH---HHHHTTCSCT
T ss_pred             HHHHHHHHH----hhcCCCCCC----hhhhcc---CCCCCCCCCC
Confidence            468999876    889999775    678853   3589999953

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00