Citrus Sinensis ID: 024369

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
cccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEcccccccccccccccccEEEcccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccc
cccccccccEEEcHHcccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHcccccccccHHHHEccccccccccccccccccccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccEEEEEEEccccccccccccEEEEEEHEEHHHHHEEEEccccccccccHHHccc
matdfksipiidvsplvakcedpkmaedpgvSQVVKQLDKACKEAGFfyvkghgipeslindVKNITQkffdlpyeekikikltpatgyrgyqrigenitkgipdMHEAIDCYKEIQEGMYGalgktmegcnqwplnppnFRALMEEYVNLCTDLSRKIMRGIALalggspfefegvragdAFWVLRIIgypglsgakdqkkpennigwycnntEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKlclcnfsgahtdygkeflnf
matdfksipiidvsplVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKikltpatgyrgyQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGlsgakdqkkpENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNWEHMLCiisfflylfiylflWSKLCLCNFSGAHTDYGKEFLNF
*******IPIIDVSPLVAKC************QVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGA******ENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGK*****
***DFKSIPIIDVSPLVAKCEDPKMA*DPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSG**********IGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
*****KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
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MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNWEHMLCIISFFLYLFIYLFLWSKLCLCNFSGAHTDYGKEFLNF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query268 2.2.26 [Sep-21-2011]
A6BM06 368 1-aminocyclopropane-1-car N/A no 0.679 0.494 0.313 3e-18
Q76NT9 368 1-aminocyclopropane-1-car yes no 0.679 0.494 0.313 3e-18
Q54RA4363 Probable iron/ascorbate o no no 0.716 0.528 0.281 2e-16
Q41452349 Flavonol synthase/flavano N/A no 0.615 0.472 0.287 4e-11
P27744328 Isopenicillin N synthase N/A no 0.630 0.515 0.283 7e-11
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.589 0.471 0.281 2e-10
Q07512348 Flavonol synthase/flavano N/A no 0.582 0.448 0.291 3e-10
B2GVM7250 Putative inactive flavono no no 0.589 0.632 0.283 4e-10
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.563 0.448 0.287 4e-10
Q54243329 Isopenicillin N synthase yes no 0.645 0.525 0.304 5e-10
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function desciption
 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           M  D + +PIID+S       D         +QV K+++KACKE GFFY+K HG+ + LI
Sbjct: 1   MEIDIEKLPIIDISSFQNNENDK--------NQVAKEINKACKEYGFFYIKNHGVDQELI 52

Query: 61  NDVKNITQKFFDLPYEEKIKIKL-TPATGYRGYQRIGENITKGIPDMHEAIDCY------ 113
            +++N+ +KFF LP E K+K K+      + G+ ++G+ IT G  D  E   CY      
Sbjct: 53  ENLQNVIKKFFSLPLEIKMKWKMGLTNREWLGFFKVGQEITYGQVDWKEG--CYYSSEMD 110

Query: 114 KEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFE 173
            +I       L  T E   Q+ +    F++ +  Y+   T LS++I+  I+L+L      
Sbjct: 111 GDINTIHNVPLYPTAEQEEQYEIQ--GFKSTIHTYIEKLTHLSQQIIEAISLSLNLPQDY 168

Query: 174 FEGVRAGDAFWVLRIIGYPGL 194
           F      D F ++ ++ YP  
Sbjct: 169 FFKNYTYDPFILMGLLHYPSF 189
Involved in ethylene biosynthesis and macrocyst formation. Overexpression induces overproduction of ethylene and augmented zyg1 expression and zygote formation.
Dictyostelium mucoroides (taxid: 31287)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function description
>sp|Q41452|FLS_SOLTU Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|P27744|IPNS_NOCLA Isopenicillin N synthase OS=Nocardia lactamdurans GN=pcbC PE=3 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|B2GVM7|FLAS2_ARATH Putative inactive flavonol synthase 2 OS=Arabidopsis thaliana GN=FLS2 PE=5 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q54243|IPNS_STRGR Isopenicillin N synthase OS=Streptomyces griseus GN=pcbC PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
255585117327 Flavonol synthase/flavanone 3-hydroxylas 0.768 0.629 0.778 2e-91
224096718343 2-oxoglutarate-dependent dioxygenase [Po 0.776 0.606 0.725 9e-90
363808340331 uncharacterized protein LOC100789278 [Gl 0.776 0.628 0.725 2e-89
225438799330 PREDICTED: probable iron/ascorbate oxido 0.776 0.630 0.721 1e-88
449484025329 PREDICTED: probable iron/ascorbate oxido 0.776 0.632 0.721 2e-88
449468303329 PREDICTED: probable iron/ascorbate oxido 0.776 0.632 0.711 2e-87
6984228329 putative flavonol synthase-like protein 0.776 0.632 0.716 9e-86
297819704332 hypothetical protein ARALYDRAFT_485377 [ 0.768 0.620 0.711 1e-85
388501998331 unknown [Lotus japonicus] 0.776 0.628 0.687 4e-84
21554579332 flavonol synthase-like protein [Arabidop 0.768 0.620 0.706 9e-84
>gi|255585117|ref|XP_002533264.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223526920|gb|EEF29126.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/208 (77%), Positives = 185/208 (88%), Gaps = 2/208 (0%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           MATDFKSIPIIDVSPLVAKC+DP +A++P V +VVKQLD+AC+EAGFFYVKGHGIP+SLI
Sbjct: 1   MATDFKSIPIIDVSPLVAKCDDPNVAQEPAVCEVVKQLDQACREAGFFYVKGHGIPDSLI 60

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
            +VK ++ KFFDLPY+EK+KIK+TPA+GYRGYQRIGENIT+GIPDMHEAIDCYKEI+ GM
Sbjct: 61  EEVKKVSHKFFDLPYKEKLKIKMTPASGYRGYQRIGENITEGIPDMHEAIDCYKEIKPGM 120

Query: 121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
           YGAL K MEGCNQWPL+PPNF+ALMEEYV LC DLSRKI+RGIALALG S  E EG  AG
Sbjct: 121 YGALSKPMEGCNQWPLDPPNFKALMEEYVALCKDLSRKILRGIALALGESADELEGEIAG 180

Query: 181 DAFWVLRIIGYPGLSGAKDQKKPENNIG 208
           DAFWV+RIIGYPG+S  K Q   EN+IG
Sbjct: 181 DAFWVMRIIGYPGVS--KKQDLAENDIG 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224096718|ref|XP_002310710.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222853613|gb|EEE91160.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363808340|ref|NP_001241995.1| uncharacterized protein LOC100789278 [Glycine max] gi|255636451|gb|ACU18564.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225438799|ref|XP_002283192.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Vitis vinifera] gi|296082373|emb|CBI21378.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449484025|ref|XP_004156762.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449468303|ref|XP_004151861.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|6984228|gb|AAF34802.1|AF228663_1 putative flavonol synthase-like protein [Euphorbia esula] Back     alignment and taxonomy information
>gi|297819704|ref|XP_002877735.1| hypothetical protein ARALYDRAFT_485377 [Arabidopsis lyrata subsp. lyrata] gi|297323573|gb|EFH53994.1| hypothetical protein ARALYDRAFT_485377 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|388501998|gb|AFK39065.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|21554579|gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
TAIR|locus:2074800332 AT3G50210 [Arabidopsis thalian 0.768 0.620 0.701 1.5e-83
TAIR|locus:2114683357 DIN11 "DARK INDUCIBLE 11" [Ara 0.727 0.546 0.647 6.7e-73
DICTYBASE|DDB_G0277497 368 aco "oxidoreductase" [Dictyost 0.723 0.527 0.300 4.6e-20
DICTYBASE|DDB_G0283291363 DDB_G0283291 [Dictyostelium di 0.716 0.528 0.281 2e-19
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.690 0.530 0.281 3.5e-17
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.563 0.432 0.353 3.6e-17
UNIPROTKB|G4NB73346 MGG_00611 "2OG-Fe(II) oxygenas 0.705 0.546 0.300 7.6e-17
ASPGD|ASPL0000060477332 AN0526 [Emericella nidulans (t 0.593 0.478 0.321 1.6e-16
ASPGD|ASPL0000013400338 AN7953 [Emericella nidulans (t 0.578 0.458 0.327 4.6e-15
UNIPROTKB|G4MXI4 396 MGG_01223 "Naringenin 3-dioxyg 0.667 0.452 0.312 1.7e-14
TAIR|locus:2074800 AT3G50210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 814 (291.6 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
 Identities = 146/208 (70%), Positives = 176/208 (84%)

Query:     1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
             MATDFKS+P+ID+S L+ KC+DP MAED GV++VV+QLDKAC++AGFFYV GHGI E +I
Sbjct:     1 MATDFKSLPVIDISRLLLKCDDPDMAEDVGVAEVVQQLDKACRDAGFFYVIGHGISEDVI 60

Query:    61 NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
             N V+ IT++FF LPYEEK+KIK+TPA GYRGYQRIGEN+TKGIPD+HEAIDCY+EI++G 
Sbjct:    61 NKVREITREFFKLPYEEKLKIKMTPAAGYRGYQRIGENVTKGIPDIHEAIDCYREIKQGK 120

Query:   121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
             YG +GK MEG NQWP NP  F+ LMEEY+ LCTDLSRKI+RGI+LAL GSP+EFEG  AG
Sbjct:   121 YGDIGKVMEGPNQWPENPQEFKELMEEYIKLCTDLSRKILRGISLALAGSPYEFEGKMAG 180

Query:   181 DAFWVLRIIGYPGLSGAKDQKKPENNIG 208
             D FWV+R+IGYPG      Q  PEN+IG
Sbjct:   181 DPFWVMRLIGYPGAEFTNGQ--PENDIG 206
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009267 "cellular response to starvation" evidence=TAS
GO:0007568 "aging" evidence=TAS
TAIR|locus:2114683 DIN11 "DARK INDUCIBLE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277497 aco "oxidoreductase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283291 DDB_G0283291 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4NB73 MGG_00611 "2OG-Fe(II) oxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000060477 AN0526 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000013400 AN7953 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MXI4 MGG_01223 "Naringenin 3-dioxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
2OGox15
2-oxoglutarate-dependent dioxygenase (344 aa)
(Populus trichocarpa)
Predicted Functional Partners:
FLS6
flavonol synthase (111 aa)
  •     0.465

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-143
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-34
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-31
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-25
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-19
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-17
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-16
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 7e-15
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-14
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-14
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-13
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-13
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-12
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-12
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-12
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-11
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 8e-11
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-08
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-08
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 9e-08
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 7e-07
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-06
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 6e-06
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-05
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-04
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.002
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information 
 Score =  404 bits (1041), Expect = e-143
 Identities = 154/208 (74%), Positives = 178/208 (85%), Gaps = 2/208 (0%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           MATDFKSIP+ID+SPLVAKC+DP MAEDP V++VV+QLDKAC++AGFFYVKGHGI +SLI
Sbjct: 1   MATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLI 60

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
             V+ +T +FF+LPYEEK+KIK+TPA GYRGYQRIGEN+TKG PDMHEAIDCY+E + G 
Sbjct: 61  KKVREVTHEFFELPYEEKLKIKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGK 120

Query: 121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
           YG LGK MEG NQWP NP  F+ALMEEY+ LCTDLSRKI+RGIALALGGSP EFEG  AG
Sbjct: 121 YGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIALALGGSPDEFEGKMAG 180

Query: 181 DAFWVLRIIGYPGLSGAKDQKKPENNIG 208
           D FWV+RIIGYPG+S       PEN+IG
Sbjct: 181 DPFWVMRIIGYPGVSNLNGP--PENDIG 206

Length = 329
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 268
PLN02485329 oxidoreductase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.94
PLN03176120 flavanone-3-hydroxylase; Provisional 99.81
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.45
PF07350 416 DUF1479: Protein of unknown function (DUF1479); In 82.14
>PLN02485 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=3.3e-62  Score=431.29  Aligned_cols=256  Identities=62%  Similarity=1.052  Sum_probs=213.6

Q ss_pred             CCCCCCCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhh
Q 024369            1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIK   80 (268)
Q Consensus         1 m~~~~~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~   80 (268)
                      |++++..||+|||+.+..+++++....++++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|++
T Consensus         1 ~~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~   80 (329)
T PLN02485          1 MATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLK   80 (329)
T ss_pred             CCCCCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHh
Confidence            89999999999999986432222111123567799999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCccccccccccccCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 024369           81 IKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM  160 (268)
Q Consensus        81 ~~~~~~~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll  160 (268)
                      +.......++||.+.+.+...+..|++|.|+++.+..+........++..+|.||+.+++||+.+++|++.|.+|+.+||
T Consensus        81 ~~~~~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll  160 (329)
T PLN02485         81 IKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKIL  160 (329)
T ss_pred             hcccCCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            97655456799998877666677899999998765433222112223457899999889999999999999999999999


Q ss_pred             HHHHHHhCCCccccccccccCccccEEEeccCCCCCC------CCCCCCCccccccccC------CcceeeecCCCCeEE
Q 024369          161 RGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGA------KDQKKPENNIGWYCNN------TEVDVFFLAYDNWEH  228 (268)
Q Consensus       161 ~~la~~Lgl~~~~f~~~~~~~~~s~lr~~~YPp~~~~------~~g~~~HtD~g~lT~~------~glqv~~~~~~~W~~  228 (268)
                      ++||++||+++++|.+.+..++.+.||++||||++..      ..|+++|||+|+||++      +||||+. .+|+|++
T Consensus       161 ~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~-~~g~Wi~  239 (329)
T PLN02485        161 RGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRN-LSGEWIW  239 (329)
T ss_pred             HHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEc-CCCcEEE
Confidence            9999999999998876654456678999999999751      3589999999999963      6899986 4799999


Q ss_pred             cCC-CcEEEEecchhhHhhhcccccccccccc
Q 024369          229 MLC-IISFFLYLFIYLFLWSKLCLCNFSGAHT  259 (268)
Q Consensus       229 V~p-pg~~vVnvGD~l~~~Sn~~l~~~~~~~~  259 (268)
                      |+| ||++||||||+||+||||++  -|..|-
T Consensus       240 V~p~pg~~vVNiGD~L~~~TnG~~--~St~HR  269 (329)
T PLN02485        240 AIPIPGTFVCNIGDMLKIWSNGVY--QSTLHR  269 (329)
T ss_pred             CCCCCCcEEEEhHHHHHHHHCCEe--eCCCce
Confidence            999 99999999999999999999  888884

>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-07
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-07
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-07
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-07
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-07
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 4   DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDV 63
           D   +P ID+  +  + +D K+ E+      +++L KA  + G  ++  HGIP  L+  V
Sbjct: 42  DGPQVPTIDLKNI--ESDDEKIREN-----CIEELKKASLDWGVMHLINHGIPADLMERV 94
Query: 64  KNITQKFFDLPYEEKIKIKLTPATG-YRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYG 122
           K   ++FF L  EEK K     ATG  +GY   G  +        E  D +       + 
Sbjct: 95  KKAGEEFFSLSVEEKEKYANDQATGKIQGY---GSKLANNASGQLEWEDYF------FHL 145
Query: 123 ALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG-- 180
           A  +     + WP  P ++     EY      L+ K+ + +++ LG  P   E    G  
Sbjct: 146 AYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLE 205
Query: 181 DAFWVLRIIGYP 192
           +    ++I  YP
Sbjct: 206 ELLLQMKINYYP 217
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-58
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-51
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 9e-50
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-39
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 6e-28
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-27
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  187 bits (477), Expect = 2e-58
 Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 20/202 (9%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           M+T   +I  +  S                 ++  ++L  + +  GF  +  + + ++ I
Sbjct: 2   MSTS--AIDPVSFSLY-----------AKDFTRFAQELGASFERYGFAVLSDYDLDQARI 48

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKG--IPDMHEAIDCYKEIQE 118
           +   +  + FF LP E K +       G RGY   G    KG    D+ E     +++  
Sbjct: 49  DAAVDSAKAFFALPVETKKQYAGVKG-GARGYIPFGVETAKGADHYDLKEFWHMGRDLPP 107

Query: 119 GMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVR 178
           G      +     N WP   P F+  +    N    +  K++  IA  L      F+   
Sbjct: 108 GHR---FRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP-T 163

Query: 179 AGDAFWVLRIIGYPGLSGAKDQ 200
             D   VLR++ YP +      
Sbjct: 164 VQDGNSVLRLLHYPPIPKDATG 185
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=6e-60  Score=413.37  Aligned_cols=236  Identities=19%  Similarity=0.215  Sum_probs=203.0

Q ss_pred             CCCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccC
Q 024369            5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT   84 (268)
Q Consensus         5 ~~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~   84 (268)
                      +++||||||+.+.+           ++++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus         4 ~~~iPvIDls~~~~-----------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~   72 (312)
T 3oox_A            4 TSAIDPVSFSLYAK-----------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV   72 (312)
T ss_dssp             CCSSCCEETHHHHH-----------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS
T ss_pred             CCCCCeEEChHhcc-----------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC
Confidence            46899999998853           3678999999999999999999999999999999999999999999999999875


Q ss_pred             CCCCCccccccccccc--cCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 024369           85 PATGYRGYQRIGENIT--KGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG  162 (268)
Q Consensus        85 ~~~~~~GY~~~~~~~~--~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~  162 (268)
                       ...++||.+.+.+..  .+..|++|.|+++.+.+....   ......+|.||+.+++||+++++|+++|.+|+.+||++
T Consensus        73 -~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~---~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~  148 (312)
T 3oox_A           73 -KGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHR---FRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEA  148 (312)
T ss_dssp             -GGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCG---GGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCccccccccceecCCCCCCCceeeeEeecCCCcCCc---chhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             446899998876643  346899999998765432111   01124578999999999999999999999999999999


Q ss_pred             HHHHhCCCccccccccccCccccEEEeccCCCCCCC--CCCCCCcccccccc-----CCcceeeecCCCCeEEcCC-CcE
Q 024369          163 IALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAK--DQKKPENNIGWYCN-----NTEVDVFFLAYDNWEHMLC-IIS  234 (268)
Q Consensus       163 la~~Lgl~~~~f~~~~~~~~~s~lr~~~YPp~~~~~--~g~~~HtD~g~lT~-----~~glqv~~~~~~~W~~V~p-pg~  234 (268)
                      |+++||+++++|.+.+ ..+.+.||++|||||+.+.  .|+++|||+|+||+     .+||||+. .+|+|++|+| ||+
T Consensus       149 la~~Lgl~~~~f~~~~-~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~-~~g~W~~V~p~pg~  226 (312)
T 3oox_A          149 IATYLKLERDFFKPTV-QDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLD-RDGQWLPINPPPGC  226 (312)
T ss_dssp             HHHHTTSCTTTTHHHH-TTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEEC-TTSCEEECCCCSSC
T ss_pred             HHHHhCcCHHHHHHHh-cCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEEC-CCCcEEECCCCCCe
Confidence            9999999999998887 4566899999999998653  58899999999997     37999986 4799999999 999


Q ss_pred             EEEecchhhHhhhcccccccccccc
Q 024369          235 FFLYLFIYLFLWSKLCLCNFSGAHT  259 (268)
Q Consensus       235 ~vVnvGD~l~~~Sn~~l~~~~~~~~  259 (268)
                      +||||||+||+||||++  -|..|-
T Consensus       227 ~vVNiGD~l~~~TnG~~--kS~~HR  249 (312)
T 3oox_A          227 LVINIGDMLERLTNNVL--PSTVHR  249 (312)
T ss_dssp             EEEEECHHHHHHTTTSS--CCCCEE
T ss_pred             EEEEhHHHHHHHhCCee--cCCCce
Confidence            99999999999999999  888884
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 268
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-26
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-22
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-22
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-21
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score =  101 bits (253), Expect = 5e-26
 Identities = 27/222 (12%), Positives = 63/222 (28%), Gaps = 28/222 (12%)

Query: 6   KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKN 65
            ++P   ++ L    +     +         +  +  ++ G FY+   G+ ++ +   K+
Sbjct: 3   TTVPTFSLAEL----QQGLHQD---------EFRRCLRDKGLFYLTDCGLTDTELKSAKD 49

Query: 66  ITQKFFDLPYEEKIKIKLTPATG-YRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGAL 124
           +   FF+   E + +   +P     RG+  +    T  I +     D             
Sbjct: 50  LVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSM---------- 99

Query: 125 GKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFW 184
                G         +F  +  +Y +     SR + R +  A G  P             
Sbjct: 100 -CYSMGTADNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPL 158

Query: 185 VLRIIGYPGLSGAKDQKKPENNIGWYCNNTEVDVFFLAYDNW 226
           +            + +   E  +    +     V  +     
Sbjct: 159 LRFRYFPQ---VPEHRSAEEQPLRMAPHYDLSMVTLIQQTPC 197
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.4e-53  Score=373.91  Aligned_cols=236  Identities=22%  Similarity=0.303  Sum_probs=190.2

Q ss_pred             CCCCCcEEeCCCCcccCCCCCCCCCccHHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcc
Q 024369            4 DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKL   83 (268)
Q Consensus         4 ~~~~iPvIDls~l~~~~~d~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~   83 (268)
                      +..+||||||+.+.++  |     .+.+++++++|++||+++|||||+||||+.++++++++++++||+||.|+|+++..
T Consensus        42 ~~~~IPvIDls~l~~~--d-----~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~  114 (349)
T d1gp6a_          42 DGPQVPTIDLKNIESD--D-----EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYAN  114 (349)
T ss_dssp             CSCCCCEEECTTTTCS--C-----HHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBC
T ss_pred             CCCCcCeEEChhcCCC--C-----HHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhc
Confidence            3458999999999752  2     24577899999999999999999999999999999999999999999999999976


Q ss_pred             CCCC-CCccccccccccccCCCCcchhhhcccccccCccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 024369           84 TPAT-GYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG  162 (268)
Q Consensus        84 ~~~~-~~~GY~~~~~~~~~~~~d~~E~f~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~Ll~~  162 (268)
                      .... .+.||.....+...+..++.+.+..... .        .....+|.||+..+.|++.+++|+++|.+|+.+|+++
T Consensus       115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~  185 (349)
T d1gp6a_         115 DQATGKIQGYGSKLANNASGQLEWEDYFFHLAY-P--------EEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA  185 (349)
T ss_dssp             BGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEE-S--------GGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCccccccccccccccccchhhhhccccc-c--------cccccccccccccchHHHHHHHHHHHHHHHHHhhhHH
Confidence            5432 2334432222222233344333221111 0        0124568999999999999999999999999999999


Q ss_pred             HHHHhCCCccccccccc--cCccccEEEeccCCCCCCC--CCCCCCccccccccC-----CcceeeecCCCCeEEcCC-C
Q 024369          163 IALALGGSPFEFEGVRA--GDAFWVLRIIGYPGLSGAK--DQKKPENNIGWYCNN-----TEVDVFFLAYDNWEHMLC-I  232 (268)
Q Consensus       163 la~~Lgl~~~~f~~~~~--~~~~s~lr~~~YPp~~~~~--~g~~~HtD~g~lT~~-----~glqv~~~~~~~W~~V~p-p  232 (268)
                      ++++||+++++|.+.+.  ..+.+.||++||||++...  .|+++|||+|+||++     +||||+.  +|+|++|+| |
T Consensus       186 la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~~--~g~W~~V~p~~  263 (349)
T d1gp6a_         186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY--EGKWVTAKCVP  263 (349)
T ss_dssp             HHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEE--TTEEEECCCCT
T ss_pred             HHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceeeec--CCceEEccCCC
Confidence            99999999999887663  3356789999999998764  589999999999973     8999964  799999999 9


Q ss_pred             cEEEEecchhhHhhhcccccccccccc
Q 024369          233 ISFFLYLFIYLFLWSKLCLCNFSGAHT  259 (268)
Q Consensus       233 g~~vVnvGD~l~~~Sn~~l~~~~~~~~  259 (268)
                      |++|||+||+||+||||++  =|..|-
T Consensus       264 ~a~vVNvGD~l~~~TnG~~--~St~HR  288 (349)
T d1gp6a_         264 DSIVMHIGDTLEILSNGKY--KSILHR  288 (349)
T ss_dssp             TCEEEEECHHHHHHTTTSS--CCCCEE
T ss_pred             CCeeeeHHhHHHHHhCCCc--cCcCcc
Confidence            9999999999999999999  888884
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure