Citrus Sinensis ID: 024405

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcEEEEccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEEHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEc
Coil and Loop (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNkwifqkldfkfplsVSCIHFICSSIGAYLVIKVLklkplitvepedrwrrifpMSFVFCINIVLGNVSLRYIPVSfmqtiksftPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLhsykfdsintvyymaPFATMILSIPALLlegsgimdwlsthpspwsAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Flexible Loop (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTfnvagnlkvr
Low Complexity Region (SEG)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYlvikvlklkpliTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Disordered region (IsUnstruct)
****LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN****
Disordered Region (DISOPRED)
************SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Disordered Region (DISEMBL)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Disordered Region (DISPRO)
***SLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	268	2.2.26 [Sep-21-2011]
Q9C521	336	UDP-galactose transporter	yes	no	0.966	0.770	0.934	1e-138
Q9SFE9	341	GDP-mannose transporter G	no	no	0.992	0.780	0.883	1e-135
Q6DBP3	309	Probable sugar phosphate/	no	no	0.981	0.851	0.316	9e-34
Q5XF09	308	Probable sugar phosphate/	no	no	0.932	0.811	0.317	2e-32
Q9FYE5	309	Probable sugar phosphate/	no	no	0.988	0.857	0.328	1e-31
Q9SS40	355	Probable sugar phosphate/	no	no	0.932	0.704	0.313	1e-29
Q9LDH3	361	Probable sugar phosphate/	no	no	0.910	0.675	0.313	1e-27
Q1JQ66	313	Solute carrier family 35	yes	no	0.858	0.734	0.289	8e-22
Q9SKJ7	347	Probable sugar phosphate/	no	no	0.899	0.694	0.293	6e-21
Q7Z769	313	Solute carrier family 35	yes	no	0.858	0.734	0.285	3e-20

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  492 bits (1266), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/259 (93%), Positives = 248/259 (95%)

Query: 9   SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68
           S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKLK
Sbjct: 5   SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query: 69  PLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
           PLI V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct: 65  PLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query: 129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct: 125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

Query: 189 SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF 248
           SINTVYYMAPFATMIL IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIF
Sbjct: 185 SINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIF 244

Query: 249 YVIHSTTAVTFNVAGNLKV 267
           YVIHSTTAVTFNVAGNLKV
Sbjct: 245 YVIHSTTAVTFNVAGNLKV 263

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/267 (88%), Positives = 250/267 (93%), Gaps = 1/267 (0%)

Query: 2   EASL-CTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYL 60
           E SL   W++FRSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+
Sbjct: 3   EGSLWRQWTMFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYI 62

Query: 61  VIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
           VIKVLKLKPLI V+PEDRWRRIFPMSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTV
Sbjct: 63  VIKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTV 122

Query: 121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
           VLQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFN+FGFCAALFGCLATSTKTILAES
Sbjct: 123 VLQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAES 182

Query: 181 LLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA 240
           LLH YKFDSINTVYYMAPFATMIL +PA LLE +GI+DW   HPSPWSA II+F+SGVLA
Sbjct: 183 LLHGYKFDSINTVYYMAPFATMILGLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLA 242

Query: 241 FCLNFSIFYVIHSTTAVTFNVAGNLKV 267
           FCLNFSIFYVI STTAVTFNVAGNLKV
Sbjct: 243 FCLNFSIFYVIQSTTAVTFNVAGNLKV 269

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  144 bits (362), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 149/265 (56%), Gaps = 2/265 (0%)

Query: 4   SLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIK 63
            + T   F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y+ I 
Sbjct: 2   KMATNGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIA 61

Query: 64  VLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQ 123
            LK+ P+ T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  
Sbjct: 62  WLKMVPMQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFA 121

Query: 124 WLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH 183
           +L+ RK   W  + +LVP+V G+++ S  E SF++FGF   +    A + K++L   LL 
Sbjct: 122 YLMTRKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLS 181

Query: 184 S--YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           S   K +S+N + YMAP A ++L    L++E + +   ++     +     +  +  LA+
Sbjct: 182 SEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAY 241

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLK 266
            +N + F V + T+A+T  V GN K
Sbjct: 242 LVNLTNFLVTNHTSALTLQVLGNAK 266

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 142/252 (56%), Gaps = 2/252 (0%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y+ I  +K+ P+ T+   
Sbjct: 15  VASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPMQTIRSR 74

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K   W  +
Sbjct: 75  VQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTY 134

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVY 194
            +LVP+V G+++ S +E SF++FGF   +    A + K++L   LL S   K +S+N + 
Sbjct: 135 FTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLNSMNLLL 194

Query: 195 YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHST 254
           YMAP A + L    L++E + +   ++     +     +  +  LA+ +N + F V   T
Sbjct: 195 YMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTNFLVTKHT 254

Query: 255 TAVTFNVAGNLK 266
           +A+T  V GN K
Sbjct: 255 SALTLQVLGNAK 266

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 146/268 (54%), Gaps = 3/268 (1%)

Query: 1   MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYL 60
           M +S    ++F S L I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y+
Sbjct: 1   MSSSAKKQTLFISTL-IISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYI 59

Query: 61  VIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
            I  LKL PL  ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T 
Sbjct: 60  SIVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTA 119

Query: 121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
           +  +L+  K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   
Sbjct: 120 LFAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGI 179

Query: 181 LLHS--YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238
           LL S   K +S+N + YM+P A + L    L +E   I   L+        +I++  + V
Sbjct: 180 LLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSV 239

Query: 239 LAFCLNFSIFYVIHSTTAVTFNVAGNLK 266
           +A+  N   F V   T+A+T  V GN K
Sbjct: 240 MAYSANLLNFLVTKHTSALTLQVLGNAK 267

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  130 bits (326), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 138/252 (54%), Gaps = 2/252 (0%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y+ I  LKL PL  ++  
Sbjct: 62  IILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPLQYLKSR 121

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  K   W  +
Sbjct: 122 SQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTY 181

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVY 194
            +LVP+V G+++ S  E  F+ FGF   +    A + K++L   LL S   + +S+N + 
Sbjct: 182 GALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLML 241

Query: 195 YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHST 254
           YM+P A + L    + +E   +   L+        +I++  + V+A+  N   F V   T
Sbjct: 242 YMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHT 301

Query: 255 TAVTFNVAGNLK 266
           +A+T  V GN K
Sbjct: 302 SALTLQVLGNAK 313

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 139/258 (53%), Gaps = 14/258 (5%)

Query: 17  ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE 76
           I  W+  N+ V++ NK++     F++P+ ++  H +  +  +  VI +  + P   +   
Sbjct: 63  IAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGIVPRQHILSR 122

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
            ++ +I  +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     ++
Sbjct: 123 RQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVY 182

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HSYKFDSINTVY 194
            +L+P+V GI+L S +E SF++FGF   +      + K+++   +L   S K  S+N + 
Sbjct: 183 LALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNLLL 242

Query: 195 YMAPFATMILSIPALLLEGS---GIMDWLSTHPSPWSAFIIIF---SSGVLAFCLNFSIF 248
           YMAP A  IL    L +EG+    +++   T P      +IIF    +  +A+ +N + F
Sbjct: 243 YMAPMAACILLPFTLYIEGNVLRVLIEKARTDP------LIIFLLAGNATVAYLVNLTNF 296

Query: 249 YVIHSTTAVTFNVAGNLK 266
            V   T+A+T  V GN K
Sbjct: 297 LVTKHTSALTLQVLGNGK 314

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  104 bits (259), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 19/249 (7%)

Query: 24  NVTVIITNKWIFQKLDFKFP-LSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRI 82
           ++ ++  NKWI+  + + FP ++++ IHF+ + +G ++  K+    P        R  +I
Sbjct: 25  SICIVFINKWIY--VHYGFPNMTLTLIHFVMTWLGLFICQKMDIFAP-----KSLRPSKI 77

Query: 83  FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 142
             ++  FC  +V  N+SL+   +   Q  K  T    + +Q + +RK F  +I  +LVPI
Sbjct: 78  LLLALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLTLVPI 137

Query: 143 VGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATM 202
             G++L S  ++ FN+ G   A  G L TS   +   +  H  + +S+  +YY AP ++ 
Sbjct: 138 TLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query: 203 ILSIPALLLE---GSGIMDWLSTHPSPWS--AFIIIFSSGVLAFCLNFSIFYVIHSTTAV 257
            L +     E   G G +        PWS  A  ++  SGV+AF +N SI+++I +T+ V
Sbjct: 198 FLLVLVPFFEPLTGDGGIF------GPWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPV 251

Query: 258 TFNVAGNLK 266
           T+N+ G+ K
Sbjct: 252 TYNMFGHFK 260

Putative transporter.

Danio rerio (taxid: 7955)

>sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1

 Score =  101 bits (251), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 139/252 (55%), Gaps = 11/252 (4%)

Query: 21  WVF-NVTVIITNKWIFQK--LDFKFPLSVSCIHF-ICSSIGAYLVIKVLKLKPLITVEPE 76
           W+F + TVI+ NK+I  K   ++ FP++++ IH   CSS+ A ++IKV K+   +++  E
Sbjct: 25  WIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMGFCSSL-AVILIKVFKVVEPVSMSRE 83

Query: 77  DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW 136
              R + P+  ++ +++ L N +  Y+ VSF+Q +K+  P     +  L+ ++ F  +  
Sbjct: 84  TYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTM 143

Query: 137 ASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVY 194
            +++ I  G+ + +  E  F+ +G    L      +T+ +L + LL S     + I ++Y
Sbjct: 144 TNMLSISFGVAIAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLY 203

Query: 195 YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHST 254
           Y+AP   + LS+P + +E   + D  S H      F+I  ++ V AF LN ++F ++  T
Sbjct: 204 YVAPCCLVFLSVPWIFVEFPVLRDTSSFHFD----FVIFGTNSVCAFALNLAVFLLVGKT 259

Query: 255 TAVTFNVAGNLK 266
           +A+T NVAG +K
Sbjct: 260 SALTMNVAGVVK 271

Arabidopsis thaliana (taxid: 3702)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 19/249 (7%)

Query: 24  NVTVIITNKWIFQKLDFKFP-LSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRI 82
           ++ ++  NKWI+  +   FP +S++ +HF+ + +G Y+  K+    P           R+
Sbjct: 25  SICIVFLNKWIY--VYHGFPNMSLTLVHFVVTWLGLYICQKLDIFAP-----KSLPPSRL 77

Query: 83  FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 142
             ++  FC  +V  N+SL+   +   Q  K+ T    + +Q   ++K F  RI  +L+PI
Sbjct: 78  LLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPI 137

Query: 143 VGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATM 202
             G++L S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP ++ 
Sbjct: 138 TLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query: 203 ILSIPALLLE---GSGIMDWLSTHPSPW--SAFIIIFSSGVLAFCLNFSIFYVIHSTTAV 257
           +L +     E   G G +        PW  SA +++  SGV+AF +N SI+++I +T+ V
Sbjct: 198 MLLVAVPFFEPVFGEGGIF------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPV 251

Query: 258 TFNVAGNLK 266
           T+N+ G+ K
Sbjct: 252 TYNMFGHFK 260

Putative transporter.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
356552668	342	PREDICTED: UDP-galactose transporter 1-l	0.992	0.777	0.921	1e-140
356549087	342	PREDICTED: UDP-galactose transporter 1-l	0.992	0.777	0.921	1e-140
358248912	345	uncharacterized protein LOC100778350 [Gl	0.996	0.773	0.914	1e-139
356509420	345	PREDICTED: UDP-galactose transporter 1-l	0.996	0.773	0.910	1e-138
297789749	336	hypothetical protein ARALYDRAFT_497286 [	0.966	0.770	0.942	1e-138
255550574	342	conserved hypothetical protein [Ricinus	0.992	0.777	0.909	1e-137
18411611	336	EamA-like transporter [Arabidopsis thali	0.966	0.770	0.934	1e-137
357438617	342	Solute carrier family 35 member E3 [Medi	0.992	0.777	0.894	1e-136
357461519	340	Solute carrier family 35 member E3 [Medi	0.981	0.773	0.901	1e-136
225459544	340	PREDICTED: UDP-galactose transporter 1 i	0.992	0.782	0.902	1e-136

>gi|356552668|ref|XP_003544685.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/266 (92%), Positives = 255/266 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSVFRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IG Y+V
Sbjct: 3   EGVICQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFN FGFCAAL GCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNAFGFCAALLGCLATSTKTILAESL 182

Query: 182 LHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           LH YKFDSINTVYYMAPFATMIL+IPALLLEG+G+++WLSTHP PWSA IIIFSSGVLAF
Sbjct: 183 LHGYKFDSINTVYYMAPFATMILAIPALLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAF 242

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLKV 267
           CLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 243 CLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549087|ref|XP_003542929.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  501 bits (1291), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/266 (92%), Positives = 255/266 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSVFRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IG Y+V
Sbjct: 3   EEVICQWSVFRSLLAILQWWAFNVTVIIINKWIFQKLDFKFPLSVSCIHFICSAIGGYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFN FGFCAAL GCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNAFGFCAALLGCLATSTKTILAESL 182

Query: 182 LHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           LH YKFDSINTVYYMAPFATMIL+IPALLLEG+G+++WLSTHP PWSA IIIFSSGVLAF
Sbjct: 183 LHGYKFDSINTVYYMAPFATMILAIPALLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAF 242

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLKV 267
           CLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 243 CLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248912|ref|NP_001240217.1| uncharacterized protein LOC100778350 [Glycine max] gi|255644617|gb|ACU22811.1| unknown [Glycine max]

 Score =  498 bits (1283), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/268 (91%), Positives = 257/268 (95%), Gaps = 1/268 (0%)

Query: 1   MEASLC-TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAY 59
           ME S    WSV RSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY
Sbjct: 1   MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAY 60

Query: 60  LVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 119
           +VIK+LKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT
Sbjct: 61  VVIKLLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120

Query: 120 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 179
           VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE
Sbjct: 121 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 180

Query: 180 SLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239
           SLLH YKFDSINTVYYMAPFATMIL++PA+LLEG+GI++WL+THP PWSA IIIFSSGVL
Sbjct: 181 SLLHGYKFDSINTVYYMAPFATMILAVPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVL 240

Query: 240 AFCLNFSIFYVIHSTTAVTFNVAGNLKV 267
           AFCLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 241 AFCLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509420|ref|XP_003523447.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/268 (91%), Positives = 257/268 (95%), Gaps = 1/268 (0%)

Query: 1   MEASLC-TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAY 59
           ME S    WSV RSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY
Sbjct: 1   MEESFVFQWSVIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAY 60

Query: 60  LVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 119
           +VIK+LKLKPLITV+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT
Sbjct: 61  VVIKLLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATT 120

Query: 120 VVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 179
           VVLQWLVWRKYFDWRIWASL+PIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE
Sbjct: 121 VVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAE 180

Query: 180 SLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL 239
           SLLH YKFDSINTVYYMAPFATMIL++PA+LLEG+GI++WL+THP PWSA IIIFSSGVL
Sbjct: 181 SLLHGYKFDSINTVYYMAPFATMILALPAMLLEGNGILEWLNTHPYPWSALIIIFSSGVL 240

Query: 240 AFCLNFSIFYVIHSTTAVTFNVAGNLKV 267
           AFCLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 241 AFCLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297789749|ref|XP_002862808.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata] gi|297308543|gb|EFH39066.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata]

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/259 (94%), Positives = 249/259 (96%)

Query: 9   SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68
           S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKLK
Sbjct: 5   SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query: 69  PLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
           PLI VEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct: 65  PLIVVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query: 129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct: 125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

Query: 189 SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF 248
           SINTVYYMAPFATMIL IPALLLEGSGI+ W   HP+PWSA IIIFSSGVLAFCLNFSIF
Sbjct: 185 SINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALIIIFSSGVLAFCLNFSIF 244

Query: 249 YVIHSTTAVTFNVAGNLKV 267
           YVIHSTTAVTFNVAGNLKV
Sbjct: 245 YVIHSTTAVTFNVAGNLKV 263

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550574|ref|XP_002516337.1| conserved hypothetical protein [Ricinus communis] gi|223544567|gb|EEF46084.1| conserved hypothetical protein [Ricinus communis]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/266 (90%), Positives = 253/266 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E+ LC WSVFRSLLAI+QWWVFNVTVII NKWIFQKLDFKFPL+VSC+HFICSSIGAYL 
Sbjct: 3   ESVLCQWSVFRSLLAIIQWWVFNVTVIIMNKWIFQKLDFKFPLTVSCVHFICSSIGAYLA 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI V+PEDRWRRIFPMSFVFC+NIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLIVVDPEDRWRRIFPMSFVFCVNIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 182

Query: 182 LHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           LH YKFDSINTVYYMAPFATMIL +PA+LLEGSG++DW  TH S  S+ IIIFSSGVLAF
Sbjct: 183 LHGYKFDSINTVYYMAPFATMILGVPAMLLEGSGVVDWFYTHQSVGSSLIIIFSSGVLAF 242

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLKV 267
           CLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 243 CLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411611|ref|NP_565158.1| EamA-like transporter [Arabidopsis thaliana] gi|75168880|sp|Q9C521.1|UGAL1_ARATH RecName: Full=UDP-galactose transporter 1; Short=At-UDP-GalT1 gi|12323396|gb|AAG51677.1|AC010704_21 unknown protein; 76010-78007 [Arabidopsis thaliana] gi|13430498|gb|AAK25871.1|AF360161_1 unknown protein [Arabidopsis thaliana] gi|21281058|gb|AAM44935.1| unknown protein [Arabidopsis thaliana] gi|46934764|emb|CAG18176.1| UDP-galactose transporter [Arabidopsis thaliana] gi|332197879|gb|AEE36000.1| EamA-like transporter [Arabidopsis thaliana]

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/259 (93%), Positives = 248/259 (95%)

Query: 9   SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK 68
           S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY+VIKVLKLK
Sbjct: 5   SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query: 69  PLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
           PLI V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct: 65  PLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query: 129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
           KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct: 125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

Query: 189 SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF 248
           SINTVYYMAPFATMIL IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIF
Sbjct: 185 SINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIF 244

Query: 249 YVIHSTTAVTFNVAGNLKV 267
           YVIHSTTAVTFNVAGNLKV
Sbjct: 245 YVIHSTTAVTFNVAGNLKV 263

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438617|ref|XP_003589584.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355478632|gb|AES59835.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/266 (89%), Positives = 253/266 (95%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E  +C WSV RSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IGAY+V
Sbjct: 3   EGLVCQWSVVRSLLAILQWWAFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYVV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI+V+P+DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLISVDPQDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFNMFGFCAALFGCLATSTKTILAE+L
Sbjct: 123 LQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNMFGFCAALFGCLATSTKTILAEAL 182

Query: 182 LHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           LH YKFDSINTVY+MAPFAT+I+  PALLLEG+GI++W S HP PW+A IIIFSSGVLAF
Sbjct: 183 LHGYKFDSINTVYHMAPFATLIMVFPALLLEGNGILEWFSIHPYPWAAMIIIFSSGVLAF 242

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLKV 267
           CLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 243 CLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461519|ref|XP_003601041.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355490089|gb|AES71292.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/263 (90%), Positives = 252/263 (95%)

Query: 5   LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKV 64
           L  WSV RSLL ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICS+IGAY+VIKV
Sbjct: 7   LFQWSVIRSLLCILQWWTFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGAYIVIKV 66

Query: 65  LKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW 124
           LKLKPLITV+PEDRW+RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW
Sbjct: 67  LKLKPLITVDPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW 126

Query: 125 LVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS 184
           LVWRKYFDWRIWASL+PIVGGILLTSVTE+SFNMFGFCAAL GCLATSTKTILAESLLH 
Sbjct: 127 LVWRKYFDWRIWASLIPIVGGILLTSVTEMSFNMFGFCAALLGCLATSTKTILAESLLHG 186

Query: 185 YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLN 244
           YKFDSINTVYYMAP+ATMIL +PA+LLEG+G+++WL+THP PWSA IIIFSSGVLAFCLN
Sbjct: 187 YKFDSINTVYYMAPYATMILVLPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLN 246

Query: 245 FSIFYVIHSTTAVTFNVAGNLKV 267
           FSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 247 FSIFYVIHSTTAVTFNVAGNLKV 269

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459544|ref|XP_002285850.1| PREDICTED: UDP-galactose transporter 1 isoform 1 [Vitis vinifera] gi|225459546|ref|XP_002285851.1| PREDICTED: UDP-galactose transporter 1 isoform 2 [Vitis vinifera] gi|147794987|emb|CAN67423.1| hypothetical protein VITISV_006650 [Vitis vinifera] gi|302141824|emb|CBI19027.3| unnamed protein product [Vitis vinifera]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/266 (90%), Positives = 251/266 (94%)

Query: 2   EASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV 61
           E+ LC WS FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSCIHFICS+IGAYLV
Sbjct: 3   ESLLCQWSAFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYLV 62

Query: 62  IKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 121
           IKVLKLKPLI V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV
Sbjct: 63  IKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVV 122

Query: 122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 181
           LQW+VWRKYF+WRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL
Sbjct: 123 LQWMVWRKYFEWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESL 182

Query: 182 LHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF 241
           LH YKFDSINTVYYMAPFATMIL++PA++LEG G++DW  TH S   A IIIFSSGVLAF
Sbjct: 183 LHGYKFDSINTVYYMAPFATMILAVPAMVLEGPGVIDWFQTHESIGPALIIIFSSGVLAF 242

Query: 242 CLNFSIFYVIHSTTAVTFNVAGNLKV 267
           CLNFSIFYVIHSTTAVTFNVAGNLKV
Sbjct: 243 CLNFSIFYVIHSTTAVTFNVAGNLKV 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.966	0.770	0.891	1e-123
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.992	0.780	0.842	1.7e-121
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.921	0.709	0.351	8e-37
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.947	0.822	0.319	9.5e-34
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.947	0.824	0.315	5.2e-33
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.988	0.857	0.305	2e-31
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.958	0.723	0.296	4.9e-30
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.921	0.684	0.305	1.9e-28
UNIPROTKB|F1NGX8	313	SLC35E3 "Uncharacterized prote	0.850	0.728	0.310	5.2e-26
UNIPROTKB|A4IFK2	313	SLC35E3 "Solute carrier family	0.850	0.728	0.286	8.4e-26

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
 Identities = 231/259 (89%), Positives = 236/259 (91%)

Query:     9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXX 68
             S+FRSLLAILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY         
Sbjct:     5 SMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLK 64

Query:    69 XXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
                 V+PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR
Sbjct:    65 PLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 124

Query:   129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD 188
             KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFD
Sbjct:   125 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFD 184

Query:   189 SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF 248
             SINTVYYMAPFATMIL IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIF
Sbjct:   185 SINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIF 244

Query:   249 YVIHSTTAVTFNVAGNLKV 267
             YVIHSTTAVTFNVAGNLKV
Sbjct:   245 YVIHSTTAVTFNVAGNLKV 263

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
 Identities = 225/267 (84%), Positives = 238/267 (89%)

Query:     2 EASLCT-WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYX 60
             E SL   W++FRSLL+ILQWW FNVTVII NKWIFQKLDFKFPLSVSC+HFICSSIGAY 
Sbjct:     3 EGSLWRQWTMFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYI 62

Query:    61 XXXXXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
                         V+PEDRWRRIFPMSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTV
Sbjct:    63 VIKVLKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTV 122

Query:   121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
             VLQWLVWRKYFDWRIWASLVPIVGGILLTS+TELSFN+FGFCAALFGCLATSTKTILAES
Sbjct:   123 VLQWLVWRKYFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAES 182

Query:   181 LLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA 240
             LLH YKFDSINTVYYMAPFATMIL +PA LLE +GI+DW   HPSPWSA II+F+SGVLA
Sbjct:   183 LLHGYKFDSINTVYYMAPFATMILGLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLA 242

Query:   241 FCLNFSIFYVIHSTTAVTFNVAGNLKV 267
             FCLNFSIFYVI STTAVTFNVAGNLKV
Sbjct:   243 FCLNFSIFYVIQSTTAVTFNVAGNLKV 269

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 92/262 (35%), Positives = 154/262 (58%)

Query:    16 AILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIH-FICSSIGAYXXXXXXXXXXXXTVE 74
             A+  W++ N++ +I NK+I+  L F +P++++ IH F+C  IG+             TV+
Sbjct:    20 ALALWFILNISTLILNKYIYSSLYFYYPITLTAIHMFVCW-IGSVAVLRVYKLIPLITVQ 78

Query:    75 PEDR-WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVW------ 127
                + +  I  +S +FC NIV GNVSLR++PVSFMQT+KS  P  TV+L  L +      
Sbjct:    79 WSGKQFINIMILSILFCSNIVFGNVSLRWVPVSFMQTVKSSVPLFTVILTTLFFSNIGGK 138

Query:   128 RKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKF 187
             +  F    + S++PIVGG+ + S++E++FN  GF AAL   + ++   I++  L+ + + 
Sbjct:   139 KTTFTRGTYLSMIPIVGGVCVASLSEVNFNQAGFIAALASSILSAVFAIVS-GLILTQQM 197

Query:   188 DSINTVYYMAPFATMILSIPALLLEGSGIM-DW-LSTHPSPWSAFIIIFSSGVLAFCLNF 245
             +++N +YYM+P +  +L   +  +E + I  +W L     P    +I+  SG++AF LN 
Sbjct:   198 NAVNLLYYMSPISCCLLFPLSAFMEWNAIANEWPLYGESKP---IVILLLSGLIAFLLNT 254

Query:   246 SIFYVIHSTTAVTFNVAGNLKV 267
               F VI  T+ +T+ V+GNLKV
Sbjct:   255 FTFLVIKLTSPLTYTVSGNLKV 276

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 83/260 (31%), Positives = 147/260 (56%)

Query:    11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXX 70
             F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y           
Sbjct:     9 FFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPM 68

Query:    71 XTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
              T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+ RK 
Sbjct:    69 QTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKK 128

Query:   131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFD 188
               W  + +LVP+V G+++ S  E SF++FGF   +    A + K++L   LL S   K +
Sbjct:   129 EAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLN 188

Query:   189 SINTVYYMAPFATMILSIPA-LLLEGSGIMDWLSTHPSPWS-AFIIIFSSGVLAFCLNFS 246
             S+N + YMAP A ++L +PA L++E + +   ++     +   + ++F+S  LA+ +N +
Sbjct:   189 SMNLLLYMAPIAVVLL-LPATLIMEKNVVGITIALARDDFRIVWYLLFNSA-LAYLVNLT 246

Query:   247 IFYVIHSTTAVTFNVAGNLK 266
              F V + T+A+T  V GN K
Sbjct:   247 NFLVTNHTSALTLQVLGNAK 266

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 82/260 (31%), Positives = 145/260 (55%)

Query:    11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXX 70
             F ++  +  W+  N+ V++ NK++     FK+P+ ++  H    S+ +Y           
Sbjct:     9 FFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPM 68

Query:    71 XTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
              T+    ++ +I  +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K 
Sbjct:    69 QTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKR 128

Query:   131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFD 188
               W  + +LVP+V G+++ S +E SF++FGF   +    A + K++L   LL S   K +
Sbjct:   129 EAWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLN 188

Query:   189 SINTVYYMAPFATMILSIPA-LLLEGSGIMDWLSTHPSPWS-AFIIIFSSGVLAFCLNFS 246
             S+N + YMAP A + L +PA L++E + +   ++     +   + ++F+S  LA+ +N +
Sbjct:   189 SMNLLLYMAPIAVVFL-LPATLIMEKNVVGITIALARDDFRIVWYLLFNSA-LAYFVNLT 246

Query:   247 IFYVIHSTTAVTFNVAGNLK 266
              F V   T+A+T  V GN K
Sbjct:   247 NFLVTKHTSALTLQVLGNAK 266

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 82/268 (30%), Positives = 139/268 (51%)

Query:     1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYX 60
             M +S    ++F S L I+ W+  N+ V++ NK++     FKFP+ ++  H    +I +Y 
Sbjct:     1 MSSSAKKQTLFISTL-IISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYI 59

Query:    61 XXXXXXXXXXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTV 120
                         ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T 
Sbjct:    60 SIVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTA 119

Query:   121 VLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAES 180
             +  +L+  K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   
Sbjct:   120 LFAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGI 179

Query:   181 LLHSY--KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV 238
             LL S   K +S+N + YM+P A + L    L +E   I   L+        +I++  + V
Sbjct:   180 LLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSV 239

Query:   239 LAFCLNFSIFYVIHSTTAVTFNVAGNLK 266
             +A+  N   F V   T+A+T  V GN K
Sbjct:   240 MAYSANLLNFLVTKHTSALTLQVLGNAK 267

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 77/260 (29%), Positives = 136/260 (52%)

Query:     9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXX 68
             ++F S L IL W+  N+ V++ NK++     FKFP+ ++  H    +I +Y         
Sbjct:    55 TLFISSLIIL-WYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLV 113

Query:    69 XXXTVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWR 128
                 ++   ++ ++  +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  
Sbjct:   114 PLQYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTF 173

Query:   129 KYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--K 186
             K   W  + +LVP+V G+++ S  E  F+ FGF   +    A + K++L   LL S   +
Sbjct:   174 KREAWVTYGALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGER 233

Query:   187 FDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFS 246
              +S+N + YM+P A + L    + +E   +   L+        +I++  + V+A+  N  
Sbjct:   234 LNSMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLL 293

Query:   247 IFYVIHSTTAVTFNVAGNLK 266
              F V   T+A+T  V GN K
Sbjct:   294 NFLVTKHTSALTLQVLGNAK 313

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 78/255 (30%), Positives = 132/255 (51%)

Query:    17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXXXT--VE 74
             I  W+  N+ V++ NK++     F++P+ ++  H +  S  AY               + 
Sbjct:    63 IAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHML--SCAAYSSAVINIAGIVPRQHIL 120

Query:    75 PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWR 134
                ++ +I  +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     
Sbjct:   121 SRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTE 180

Query:   135 IWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HSYKFDSINT 192
             ++ +L+P+V GI+L S +E SF++FGF   +      + K+++   +L   S K  S+N 
Sbjct:   181 VYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNL 240

Query:   193 VYYMAPFATMILSIPALLLEGSGIMDWLS-THPSPWSAFIIIFSSGVLAFCLNFSIFYVI 251
             + YMAP A  IL    L +EG+ +   +      P   F++   +  +A+ +N + F V 
Sbjct:   241 LLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLA-GNATVAYLVNLTNFLVT 299

Query:   252 HSTTAVTFNVAGNLK 266
               T+A+T  V GN K
Sbjct:   300 KHTSALTLQVLGNGK 314

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

UNIPROTKB|F1NGX8 SLC35E3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 78/251 (31%), Positives = 129/251 (51%)

Query:    24 NVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYXXXXXXXXXXXXTVEPED-RWRRI 82
             ++ ++  NKW++ +L F   LS++ +HF  + +G Y               P+  R  ++
Sbjct:    25 SICIVFLNKWLYVRLGFP-NLSLTLVHFAITWLGLYLCQALGAFA------PKSLRAAQV 77

Query:    83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 142
              P++  FC  +V  N+SL+   +   Q  K+ T    V++Q L + K F  RI  +LVPI
Sbjct:    78 LPLALSFCGFVVFTNLSLQSNTIGTYQLAKAMTTPVIVLIQSLAYGKSFPLRIKLTLVPI 137

Query:   143 VGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPF--A 200
               G+ L S  ++ FN+ G   A  G L TS   +   +  H  + +S+  +YY AP   A
Sbjct:   138 TLGVFLNSYYDVKFNVLGTVFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query:   201 TMILSIP---ALLLEGSGIMDWLSTHPSPW--SAFIIIFSSGVLAFCLNFSIFYVIHSTT 255
              ++  IP    +  EG GI         PW  SA I++  SGV+AF +N SI+++I +T+
Sbjct:   198 MLLFIIPFFEPVFGEG-GIF-------GPWTLSAVIMVLLSGVIAFMVNLSIYWIIGNTS 249

Query:   256 AVTFNVAGNLK 266
              VT+N+ G+ K
Sbjct:   250 PVTYNMFGHFK 260

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A4IFK2 SLC35E3 "Solute carrier family 35 member E3" [Bos taurus (taxid:9913)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 72/251 (28%), Positives = 133/251 (52%)

Query:    24 NVTVIITNKWIFQKLDFKFP-LSVSCIHFICSSIGAYXXXXXXXXXXXXTVEPEDRWRRI 82
             ++ ++  NKWI+  + + FP +S++ +HF+ + +G Y            ++ P     ++
Sbjct:    25 SICIVFLNKWIY--VHYGFPNMSLTLVHFVVTWLGLYVCQKLDIFAPK-SLPPS----KL 77

Query:    83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 142
               ++  FC  +V  N+SL+   +   Q  K+ T    +V+Q L ++K F  +I  +L+PI
Sbjct:    78 LLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPI 137

Query:   143 VGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPF--A 200
               G++L S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP   A
Sbjct:   138 TLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSA 197

Query:   201 TMILSIP---ALLLEGSGIMDWLSTHPSPWS--AFIIIFSSGVLAFCLNFSIFYVIHSTT 255
              +++++P    +  EG GI         PWS  A +++  SGV+AF +N SI+++I +T+
Sbjct:   198 MLLVAVPFFEPVFAEG-GIF-------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTS 249

Query:   256 AVTFNVAGNLK 266
              VT+N+ G+ K
Sbjct:   250 PVTYNMFGHFK 260

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C521	UGAL1_ARATH	No assigned EC number	0.9343	0.9664	0.7708	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.142__1__AT1G77610.1 annotation not avaliable (336 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	268
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	8e-19
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	9e-15
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	4e-11
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-08
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	0.004

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 83.6 bits (207), Expect = 8e-19
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 6/195 (3%)

Query: 20  WWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLV-IKVLKLKPLITVEPEDR 78
           W+  NV   I NK +     F +P   + I     S+   L     L  +  I+      
Sbjct: 10  WYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSA---L 64

Query: 79  WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWAS 138
            + + P++ V  I  V  NVSL  + VSF  TIK+  P  +VVL      + F   +W S
Sbjct: 65  LKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLS 124

Query: 139 LVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAP 198
           L+PIVGG+ L S TELSFN  GF +A+   +   ++ I ++  +     D  N   Y++ 
Sbjct: 125 LLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISI 184

Query: 199 FATMILSIPALLLEG 213
            +  +LS PA + EG
Sbjct: 185 MSLFLLSPPAFITEG 199

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 72.8 bits (179), Expect = 9e-15
 Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 15/267 (5%)

Query: 12  RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI 71
           +  L  L W+  NV  ++ NK     L    P ++S +      + A L+      + + 
Sbjct: 49  KLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFA-LLYWATGFRKIP 105

Query: 72  TVEPEDRW-RRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY 130
            ++    + +   P             +S+    VSF   +K+  P  T +L  L  +++
Sbjct: 106 RIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF 165

Query: 131 FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFD-- 188
            +   + SL+PIVGG+ L SV EL F    F  A+   L +S ++I A+  + +      
Sbjct: 166 LNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGE 225

Query: 189 --SINTVYYMAPFATMILSIP-ALLLEGSGIMDWLSTHP---SPWSAFIIIFS---SGVL 239
             + + +Y +      ++S+P  L  EG   +   + +    + ++  IIIF    SGV 
Sbjct: 226 NLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285

Query: 240 AFCLNFSIFYVIHSTTAVTFNVAGNLK 266
            +  N   FY +     VT  VA  LK
Sbjct: 286 YYLYNEVAFYCLGKVNQVTHAVANTLK 312

Length = 350

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 160 GFCAALFGCLATSTKTILAESLLHS---YKFDSINTVYYMAPFATMILSIPALLLEGSGI 216
           GF  AL      + + IL++ LL      K + +  +YY++P A ++L    L  EG  +
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 217 M---DWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLK 266
                            +++  SGVLAF  N S F ++  T+ +T +VAG +K
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVK 113

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 38/229 (16%), Positives = 77/229 (33%), Gaps = 16/229 (6%)

Query: 42  FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLR 101
           F   ++   F+  S+   L + + K         +   +    +   F ++ VL N +L+
Sbjct: 31  FGNLLTFAQFLFISLVGLLYLLLFKK----LKPRKIPLKTYVLIVATFFLSSVLNNEALK 86

Query: 102 YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL---------TSVT 152
           YI        KS      ++L  L++ K +    + S + I  G+++          +  
Sbjct: 87  YISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSK 146

Query: 153 ELSF-NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLL 211
             +F +  G        L  +      E L   Y   S   ++Y    +     +  L +
Sbjct: 147 LTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDI 206

Query: 212 EGSGIMD-WLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTF 259
               +          P   F ++ +S        F +FY+I    A+T 
Sbjct: 207 RTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFF-VFYLISEFGALTV 254

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 50/263 (19%), Positives = 110/263 (41%), Gaps = 22/263 (8%)

Query: 14  LLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITV 73
           L A L +   ++ + +TNK++   L F     +  +  +   +G  L++K L+L      
Sbjct: 8   LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVG-LLILKFLRLVEFRLT 66

Query: 74  EPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY--- 130
           +     ++ FP+SF+  + I   + SL+Y+ V      K+ T       + L +      
Sbjct: 67  K----AKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTS 122

Query: 131 -----FDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY 185
                F   + +S+V   G    ++      N  G+      CL+++   ++    +   
Sbjct: 123 LELLSFILMVLSSVVATWGDQQASAFKAQILNP-GYLWMFTNCLSSAAFVLIMRKRIKLT 181

Query: 186 KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPS---PWSAFIIIFSSGVLAFC 242
            F   +T++Y       +LS+P LL       DW   + +      + + +F SG+ +  
Sbjct: 182 NFKDFDTMFY-----NNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVG 236

Query: 243 LNFSIFYVIHSTTAVTFNVAGNL 265
           +++   + +  T++ T+++ G L
Sbjct: 237 ISYCSAWCVRVTSSTTYSMVGAL 259

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.93
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.92
PLN00411	358	nodulin MtN21 family protein; Provisional	99.92
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.89
PRK11272	292	putative DMT superfamily transporter inner membran	99.87
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.86
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.85
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.84
PRK11689	295	aromatic amino acid exporter; Provisional	99.84
PRK15430	296	putative chloramphenical resistance permease RarD;	99.83
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.82
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.79
KOG1581	327	consensus UDP-galactose transporter related protei	99.76
KOG1580	337	consensus UDP-galactose transporter related protei	99.74
KOG2765	416	consensus Predicted membrane protein [Function unk	99.71
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.68
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.67
KOG1582	367	consensus UDP-galactose transporter related protei	99.62
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.6
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.58
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.53
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.47
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.42
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.35
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.3
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.26
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.25
COG2962	293	RarD Predicted permeases [General function predict	99.25
KOG2766	336	consensus Predicted membrane protein [Function unk	99.17
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.13
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.11
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.9
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.5
PLN00411	358	nodulin MtN21 family protein; Provisional	98.49
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.48
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.44
PRK11272	292	putative DMT superfamily transporter inner membran	98.42
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.38
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.27
PRK11689	295	aromatic amino acid exporter; Provisional	98.17
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.14
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.09
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.08
PRK15430	296	putative chloramphenical resistance permease RarD;	97.9
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.89
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.87
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.73
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.61
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.52
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.43
PRK13499	345	rhamnose-proton symporter; Provisional	97.37
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.28
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.28
COG2962	293	RarD Predicted permeases [General function predict	97.24
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.21
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.2
PRK11431	105	multidrug efflux system protein; Provisional	97.19
COG2076	106	EmrE Membrane transporters of cations and cationic	97.16
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.09
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.83
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.8
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.67
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.45
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	96.36
COG2510	140	Predicted membrane protein [Function unknown]	96.14
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.09
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.94
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.82
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.8
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.16
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.77
KOG1581	327	consensus UDP-galactose transporter related protei	94.41
KOG4510	346	consensus Permease of the drug/metabolite transpor	93.78
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.61
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.68
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.48
PRK13499	345	rhamnose-proton symporter; Provisional	92.29
KOG2765	416	consensus Predicted membrane protein [Function unk	90.16
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	89.12
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	87.63
KOG1580	337	consensus UDP-galactose transporter related protei	84.6
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	80.05

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-35  Score=248.51  Aligned_cols=261  Identities=40%  Similarity=0.658  Sum_probs=229.2

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHH
Q 024405            5 LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFP   84 (268)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (268)
                      .++++..+...+...|++++++.++.||++++.++|+||.+++..++.++.+..... +..+..+..+.+++.+++.++|
T Consensus        10 ~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~~~~~~~~~~~~llp   88 (316)
T KOG1441|consen   10 GQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVPPSKISSKLPLRTLLP   88 (316)
T ss_pred             cccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCCccccccchHHHHH
Confidence            456788899999999999999999999999998899999999999888888777655 4445566556556789999999


Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHHHHH
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAA  164 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~  164 (268)
                      .+++++++..++|.|+++++++++|++|+++|++++++++++.+|+++++.+.+++....|+.+.+.+|.++|+.|.+.+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHhHHHHHHHH-HHHHHhccccccccccCCCCchHHHHHHHHHHHHHH
Q 024405          165 LFGCLATSTKTILAESLL--HSYKFDSINTVYYMAPFATMILS-IPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  241 (268)
Q Consensus       165 l~s~~~~a~~~i~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (268)
                      +.+.+..++++++.|+++  |+++.|+.+.++|+.+.+.+.++ |.....|+.... ......++...+..+..+ ++++
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s-v~~f  246 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFV-GFLTAPWFVTFLILLLNS-VLAF  246 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccccee-eeeccccchhhHHHHHHH-HHHH
Confidence            999999999999999999  57789999999999999999999 877777765441 112222233334444444 9999


Q ss_pred             HHHHHHHHHHhccCcchhhhcccccCC
Q 024405          242 CLNFSIFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       242 ~~~~~~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      .+|.+.|++++++||+|+++.|++|++
T Consensus       247 ~~Nls~f~~ig~tSalT~~V~g~~K~~  273 (316)
T KOG1441|consen  247 LLNLSAFLVIGRTSALTYSVAGHMKRI  273 (316)
T ss_pred             HHHHHHHHHHcccCchhhhhhccceEE
Confidence            999999999999999999999999984

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.9e-33  Score=244.46  Aligned_cols=256  Identities=24%  Similarity=0.386  Sum_probs=216.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccC-hhhhhHHHHHHHHH
Q 024405           10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVE-PEDRWRRIFPMSFV   88 (268)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   88 (268)
                      +++...+++.||.+|+..++.||++++  ++|||++++++|++++.+.+.+.... +.+++++.+ ++++++.+++.|++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999  58999999999999998876555432 334434443 45688999999999


Q ss_pred             HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHHHHHHHHH
Q 024405           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGC  168 (268)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  168 (268)
                      +...+...+.|+++++++++++++++.|+++++++++++|||++++++.+++++++|+.+.+.+|.++++.|++++++|+
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~  203 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN  203 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence            97777778899999999999999999999999999999999999999999999999999999888888899999999999


Q ss_pred             HHHHHHHHHHHHHhccC-----CCChHHHHHHHhHHHHHHHHHHHHHhcccccc-ccc----cCCCC-chHHHHHHHHHH
Q 024405          169 LATSTKTILAESLLHSY-----KFDSINTVYYMAPFATMILSIPALLLEGSGIM-DWL----STHPS-PWSAFIIIFSSG  237 (268)
Q Consensus       169 ~~~a~~~i~~k~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~----~~~~~-~~~~~~~~~~~~  237 (268)
                      +++++|+++.|+.++++     +.++.+...++.+.+.++++|+....|+.... .+.    ..... ....+..++.++
T Consensus       204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~  283 (350)
T PTZ00343        204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG  283 (350)
T ss_pred             HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            99999999999988754     36677788888999999999998877653211 110    11111 123455678889


Q ss_pred             HHHHHHHHHHHHHHhccCcchhhhcccccCC
Q 024405          238 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       238 ~~~~~~~~~~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      +..+.+|.+.|.+++++||++.++.+++|++
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V  314 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRV  314 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence            9999999999999999999999999999974

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=3e-32  Score=233.36  Aligned_cols=253  Identities=26%  Similarity=0.411  Sum_probs=206.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHH
Q 024405           12 RSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCI   91 (268)
Q Consensus        12 ~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (268)
                      +..+.+..|+++|++.++.||++++  ++++|..++++|+.++.+.+.+... .+.+++++. ++++++..++.|++++.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKI-SSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence            4678899999999999999999998  5899999999999998877655422 222333344 46789999999999999


Q ss_pred             HHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHHHHHHHHHHHH
Q 024405           92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLAT  171 (268)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~  171 (268)
                      .+.+.|.|++|+++++++++++++|+++++++++++|||++++++.++.++++|+.+...+|.+.+..|+++++++++++
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999887666677788999999999999


Q ss_pred             HHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcccccc--ccccC--CCCchHHHHHHHHHHH-HHHHHHHH
Q 024405          172 STKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIM--DWLST--HPSPWSAFIIIFSSGV-LAFCLNFS  246 (268)
Q Consensus       172 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~  246 (268)
                      ++|.++.||..+++++|+.+.+.|++..+.+.+.|+....|+++..  ++...  .......+......+. +....|..
T Consensus       158 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (302)
T TIGR00817       158 VSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV  237 (302)
T ss_pred             HHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998875568999999999999999999998877653311  11110  0111122333334443 44556677


Q ss_pred             HHHHHhccCcchhhhcccccCC
Q 024405          247 IFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       247 ~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      .+.+++++||.+.++.+++|.+
T Consensus       238 ~~~~l~~~sa~t~sv~~~l~pv  259 (302)
T TIGR00817       238 AFMLLGRVSPLTHSVGNCMKRV  259 (302)
T ss_pred             HHHHHccCCchHHHHHhhhhhh
Confidence            7899999999999999998864

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=2.2e-29  Score=207.31  Aligned_cols=264  Identities=21%  Similarity=0.336  Sum_probs=229.5

Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhH
Q 024405            1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWR   80 (268)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~   80 (268)
                      |+++....+....+..++.|+.+|+.+++.||++++.++||..+++...|.+.+.+.+... +..|..+.++++ ++..|
T Consensus         1 ~~~~~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~~lv~~~~l~-~~~~k   78 (314)
T KOG1444|consen    1 MRSDEGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRLGLVNFRPLD-LRTAK   78 (314)
T ss_pred             CCccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHhceeecCCcC-hHHHH
Confidence            4555666677788999999999999999999999997666666666669999888877654 444555555554 55888


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHH
Q 024405           81 RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFG  160 (268)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G  160 (268)
                      +++|.++++.++.+.+..+++|+++|.++++|+.+|+++++.+..++|.++++..+.++..+.+|......+|.+++..|
T Consensus        79 k~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~g  158 (314)
T KOG1444|consen   79 KWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRG  158 (314)
T ss_pred             HHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHH
Q 024405          161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  240 (268)
Q Consensus       161 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
                      +.++....++.+.+.+..||..+..+.+.+++++|+++.+.+.+......+|+.+-.+........+.++..+.++|+++
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~g  238 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMG  238 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHH
Confidence            99999999999999999999988888999999999999999999999988876541111222233456789999999999


Q ss_pred             HHHHHHHHHHHhccCcchhhhcccccC
Q 024405          241 FCLNFSIFYVIHSTTAVTFNVAGNLKV  267 (268)
Q Consensus       241 ~~~~~~~~~~i~~~sa~t~sv~~~~k~  267 (268)
                      ++.+|+.++|.+.+|+.|.+++| +|+
T Consensus       239 f~isy~s~~ct~~~SAtT~tivG-~~n  264 (314)
T KOG1444|consen  239 FGISYTSFLCTRVNSATTTTIVG-AKN  264 (314)
T ss_pred             HHHHHHHHHHHhhccccceeehh-hhh
Confidence            99999999999999999999999 876

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.96  E-value=2.9e-28  Score=198.09  Aligned_cols=262  Identities=23%  Similarity=0.365  Sum_probs=229.1

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccChhhhhHH
Q 024405            5 LCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK---PLITVEPEDRWRR   81 (268)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~~~   81 (268)
                      +..++++..+..++.||++|.++++.+|+.-.  +|+||++++..|..+-.+......+..+.+   .+.+..|++..++
T Consensus         9 ~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~   86 (349)
T KOG1443|consen    9 QFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRR   86 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHH
Confidence            44678899999999999999999999999887  699999999999998888877665543322   2335667888899


Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHH
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGF  161 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~  161 (268)
                      ..|.++..++...+.|+|+.|++.+.|++.|++.++|+.+++.++.-||+++.-...+.++.+|+.+.+.++.+++..|.
T Consensus        87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf  166 (349)
T KOG1443|consen   87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF  166 (349)
T ss_pred             hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC---CChHHHHHHHhHHHHHHHHHHHHHhcccccccc----cc-CCCCchHHHHHH
Q 024405          162 CAALFGCLATSTKTILAESLLHSYK---FDSINTVYYMAPFATMILSIPALLLEGSGIMDW----LS-THPSPWSAFIII  233 (268)
Q Consensus       162 ~~~l~s~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~  233 (268)
                      .+...+..+.++++.+.|.++++.+   -+|....++..+...+.++|.....|++....+    .. .+...+.....+
T Consensus       167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i  246 (349)
T KOG1443|consen  167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI  246 (349)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence            9999999999999999999887643   589999999999999999999999998754422    11 122244566778


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCcchhhhcccccCC
Q 024405          234 FSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       234 ~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      .+.|.+++...++.|.++.++|.+|.|++|..|++
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel  281 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEV  281 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHH
Confidence            99999999999999999999999999999999963

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.93  E-value=6e-24  Score=181.93  Aligned_cols=243  Identities=20%  Similarity=0.295  Sum_probs=196.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHh
Q 024405           18 LQWWVFNVTVIITNKWIFQKLDFK-FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLG   96 (268)
Q Consensus        18 ~~~~~~s~~~~~~~K~~~~~~~f~-~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (268)
                      ...+.......+.+|.+.++.... +|..+++.|+..+.+...+.....+    .+.+++.+++..++.++++.++..+.
T Consensus         6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen    6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCcChHHHHHHHHHHHHHHHHHH
Confidence            344444445556677777753444 8999999999999988776655433    11224567888899999999999999


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc----ch------hHHHHHHHHH
Q 024405           97 NVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL----SF------NMFGFCAALF  166 (268)
Q Consensus        97 ~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----~~------~~~G~~~~l~  166 (268)
                      |.|++|+|.|.+++.|++.|+++++++++++|||++++++.++++..+|+.+....|.    +.      +..|+++.+.
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~  161 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLL  161 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999876542    11      1249999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHH--hccc-cccccccCCCCchHHHHHHHHHHHHHHHH
Q 024405          167 GCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALL--LEGS-GIMDWLSTHPSPWSAFIIIFSSGVLAFCL  243 (268)
Q Consensus       167 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (268)
                      +.+++|.+.++++|..++++.++.+.++|++.++.+...+....  .++. +..+...   ..+..+..+.+.++++...
T Consensus       162 sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~---~~p~~~~~l~~~s~~~~~g  238 (303)
T PF08449_consen  162 SLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS---AHPSVLLYLLLFSLTGALG  238 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH---HhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999888887  3322 1111111   2344577788888888888


Q ss_pred             HHHHHHHHhccCcchhhhcccccC
Q 024405          244 NFSIFYVIHSTTAVTFNVAGNLKV  267 (268)
Q Consensus       244 ~~~~~~~i~~~sa~t~sv~~~~k~  267 (268)
                      ....+.++++.||++.++++++|-
T Consensus       239 ~~~i~~~~~~~~al~~t~v~t~Rk  262 (303)
T PF08449_consen  239 QFFIFYLIKKFSALTTTIVTTLRK  262 (303)
T ss_pred             HHHHHHHHHhcCchhhhhHHHHHH
Confidence            888899999999999999998763

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.92  E-value=3.8e-26  Score=183.00  Aligned_cols=259  Identities=18%  Similarity=0.274  Sum_probs=219.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccC-hhhhhH
Q 024405            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQK--LDFKFPLSVSCIHFICSSIGAYLVIKVLKLK----PLITVE-PEDRWR   80 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~--~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~----~~~~~~-~~~~~~   80 (268)
                      ++.......+..++.+|+++.+.||++++.  ...+-|.++++.|+..+..++........+-    ..++.+ .-+..+
T Consensus        24 ~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r  103 (347)
T KOG1442|consen   24 ANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATAR  103 (347)
T ss_pred             HhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHH
Confidence            345677788899999999999999999985  4477899999999999888877665543222    111111 134668


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc---cchh
Q 024405           81 RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFN  157 (268)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~  157 (268)
                      .++|.++.+.+++.+.|.+++|++++++.+-++.+.+|+.+++++++|+|-+..-..++.+++.|-.+-.++|   .+.+
T Consensus       104 ~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls  183 (347)
T KOG1442|consen  104 QVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLS  183 (347)
T ss_pred             hhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccc
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999888   5678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccc-cccccccCCCCchHHHHHHHHH
Q 024405          158 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGS-GIMDWLSTHPSPWSAFIIIFSS  236 (268)
Q Consensus       158 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  236 (268)
                      +.|.++++.|.++-|+..++.||.....+-.-+.+++|++..+.++.+|...+.++. ++.++  ++-.+..+|.++.++
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~--~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF--PHLPAIKFWILMTLS  261 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc--ccchHHHHHHHHHHH
Confidence            999999999999999999999998776555678899999999999999998887543 22222  233356689999999


Q ss_pred             HHHHHHHHHHHHHHHhccCcchhhhcccccCC
Q 024405          237 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       237 ~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      |+++|..|+.+.+.+|.+||+|+.+.|++|++
T Consensus       262 glfgF~mgyvTg~QIK~TSplThnISgTAka~  293 (347)
T KOG1442|consen  262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAA  293 (347)
T ss_pred             HHHHHHhhheeeEEEEecccceeeecHhHHHH
Confidence            99999999999999999999999999999964

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.92  E-value=5.8e-23  Score=178.39  Aligned_cols=252  Identities=12%  Similarity=0.114  Sum_probs=188.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHH
Q 024405            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMS   86 (268)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (268)
                      +||......++...-+.+.++..+.|..++. +.+ |..+.++|+.++.+++.++...++++++.+...++++......+
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence            6667788888888899999999999999986 888 99999999999999888776554322211111244666677677


Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHH------hheecCcchhhhhhheeehheeeecc-cc-----
Q 024405           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLV------WRKYFDWRIWASLVPIVGGILLTSVT-EL-----  154 (268)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~-----  154 (268)
                      ++......+.+.+++|++++.++++.+++|+++++++.++      +|||.+++++++++++++|+.++... +.     
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            7665566689999999999999999999999999999999      59999999999999999999976531 10     


Q ss_pred             ------------------chh-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcccc
Q 024405          155 ------------------SFN-MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSG  215 (268)
Q Consensus       155 ------------------~~~-~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  215 (268)
                                        ..+ ..|+++++.++++||+|.+.+|+..++++ +....+.++...+.+.+.++....|+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~  244 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNN  244 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence                              112 45999999999999999999999877643 3446677777877777777777665433


Q ss_pred             ccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhccc
Q 024405          216 IMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN  264 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~  264 (268)
                      ...|...  .+... ..+++.++......+..++++++.+|...++..+
T Consensus       245 ~~~~~~~--~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~  290 (358)
T PLN00411        245 PSVWIIH--FDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKP  290 (358)
T ss_pred             cccceec--cchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHh
Confidence            3233211  12222 2344455554444445678999999999887654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.89  E-value=5.9e-23  Score=160.22  Aligned_cols=246  Identities=18%  Similarity=0.328  Sum_probs=209.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCIN   92 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (268)
                      ....++.|+..|+.+++.||++++..||+..+.+.+.|...+.+.+.+. ++.|..+   + +..+.|.++|++++....
T Consensus         7 ~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iL-k~l~~~~---f-R~t~aK~WfpiSfLLv~M   81 (309)
T COG5070           7 ELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLIL-KFLRLVE---F-RLTKAKKWFPISFLLVVM   81 (309)
T ss_pred             cchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHH-HHHhHhh---e-ehhhhhhhcCHHHHHHHH
Confidence            3456778999999999999999999899999999999999888776543 4333222   2 244778889999999999


Q ss_pred             HHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccc--------hhHHHHHHH
Q 024405           93 IVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS--------FNMFGFCAA  164 (268)
Q Consensus        93 ~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~  164 (268)
                      .+....+++|+++|.+++.|+.+.+.++..+..++|.|.+..+..+..+++..-....++|.+        .+ .|++++
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm  160 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWM  160 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEE
Confidence            999999999999999999999999999999999999999999999999998888888877742        23 499999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHH
Q 024405          165 LFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLN  244 (268)
Q Consensus       165 l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (268)
                      ...++..+.+....|+..|-.+....+.++|++..+.++++.+..+.|+++..+..+..+  ...+..++.+|+++++..
T Consensus       161 ~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~--~d~l~am~ISgl~svgiS  238 (309)
T COG5070         161 FTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS--VDSLMAMFISGLCSVGIS  238 (309)
T ss_pred             ehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC--hHHHHHHHHHHHHHhhhh
Confidence            999999999999999877766678899999999999999999999998765543333222  234678899999999999


Q ss_pred             HHHHHHHhccCcchhhhccccc
Q 024405          245 FSIFYVIHSTTAVTFNVAGNLK  266 (268)
Q Consensus       245 ~~~~~~i~~~sa~t~sv~~~~k  266 (268)
                      |++-||++.+|+.|.|++|.+.
T Consensus       239 y~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         239 YCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             hccceeEeehhhhHHHHHHHhh
Confidence            9999999999999999999864

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.87  E-value=1.1e-19  Score=154.83  Aligned_cols=239  Identities=13%  Similarity=0.159  Sum_probs=177.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHH
Q 024405            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF   87 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (268)
                      |+..........-.+.+.+.....|+..+  +.+ |..++++|+.++.+++.++...++ ++   .+++++++.....+.
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~-~~---~~~~~~~~~~~~~g~   76 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRG-HP---LPTLRQWLNAALIGL   76 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhC-CC---CCcHHHHHHHHHHHH
Confidence            44455555556666667777777899988  688 999999999999988877655432 22   123556776666776


Q ss_pred             HH-HHHHHHhhhhh-cccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc-ccchhHHHHHHH
Q 024405           88 VF-CINIVLGNVSL-RYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT-ELSFNMFGFCAA  164 (268)
Q Consensus        88 ~~-~~~~~~~~~al-~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~  164 (268)
                      +. .....+.+.+. ++++++.++++.++.|+++.+++.+ +|||++++++.+++++++|+.+...+ +.+.+..|++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~  155 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILI  155 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHH
Confidence            65 56677788888 9999999999999999999999985 69999999999999999999987643 334556899999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHH
Q 024405          165 LFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLN  244 (268)
Q Consensus       165 l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (268)
                      ++++++||.+.+..||..++   ++...+.++...+...+.+.....+++. ..     ..+...|..+.+.++.+....
T Consensus       156 l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        156 LIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERL-TA-----LPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcc-cc-----cCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999996432   3455667888888888887766544211 01     012234555566666655444


Q ss_pred             -HHHHHHHhccCcchhhhcc
Q 024405          245 -FSIFYVIHSTTAVTFNVAG  263 (268)
Q Consensus       245 -~~~~~~i~~~sa~t~sv~~  263 (268)
                       ...++.+++.++.+.++..
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~  246 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYA  246 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHH
Confidence             4567899999998887654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.86  E-value=1.8e-19  Score=153.79  Aligned_cols=247  Identities=16%  Similarity=0.217  Sum_probs=177.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcC-CCcccChhhhhHHHHHH
Q 024405            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLK-PLITVEPEDRWRRIFPM   85 (268)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~   85 (268)
                      .|+-+..+...=.-..+..+....+..+-++ +++.|..-+++-+..-.++-.....+++.+ +..+. .+.+|++.+..
T Consensus         8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~-~~~~~w~y~ll   85 (334)
T PF06027_consen    8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV-LKRPWWKYFLL   85 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh-cchhHHHHHHH
Confidence            3444444443333334444555566666665 888899888777766555443333332221 11111 23455556668


Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc---------ch
Q 024405           86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------SF  156 (268)
Q Consensus        86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~  156 (268)
                      +++...++++.+.|++|++.+.++++.++..+++++++++++|||+++.+++|+.++++|++++...|.         +.
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~  165 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSN  165 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999998765431         23


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHH
Q 024405          157 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  236 (268)
Q Consensus       157 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (268)
                      ...|+++++.|+++||+++++.|+..|+  .+..+.+....+++.++..+.....|..++.+..    +++.....++..
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~----w~~~~~~~~v~~  239 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIH----WTSQVIGLLVGY  239 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccC----CChhhHHHHHHH
Confidence            4799999999999999999999998886  5788899999999999999888888866554321    123333444444


Q ss_pred             HHHHHHHHHHHHHHHhccCcchhhh
Q 024405          237 GVLAFCLNFSIFYVIHSTTAVTFNV  261 (268)
Q Consensus       237 ~~~~~~~~~~~~~~i~~~sa~t~sv  261 (268)
                      +++-+......-..++.+||+..++
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nL  264 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNL  264 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeeh
Confidence            4443443334457789999987665

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.85  E-value=1.8e-19  Score=151.08  Aligned_cols=221  Identities=13%  Similarity=0.061  Sum_probs=167.5

Q ss_pred             HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHH-HHHHHHHHhhhhhcccch
Q 024405           27 VIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF-VFCINIVLGNVSLRYIPV  105 (268)
Q Consensus        27 ~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~~~~  105 (268)
                      .....|+.+++ +.| |..+.+.|+..+.+.+.+..+. +       +++++++.....+. ...+...+.+.|++|+++
T Consensus         4 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         4 TGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             hHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            34567998875 567 9999999999888877655432 1       12334444555554 458888999999999999


Q ss_pred             hHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024405          106 SFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAALFGCLATSTKTILAESLLHS  184 (268)
Q Consensus       106 ~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~  184 (268)
                      +.++++.++.|+++.+++.+++|||+++++++++.++++|+.++..++ .+.+..|+.+++.++++|+.+.+..|+..++
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~  153 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK  153 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence            999999999999999999999999999999999999999999876443 3456789999999999999999999998776


Q ss_pred             CCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHH-HHHHHHHHHHhccCcchhhhcc
Q 024405          185 YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF-CLNFSIFYVIHSTTAVTFNVAG  263 (268)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~sa~t~sv~~  263 (268)
                      .+.++.....+.+..+.+.+.+.....++..  ..      +...+..+...++++. ......++.+++.++.+.+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~  225 (260)
T TIGR00950       154 EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QA------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA  225 (260)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--Cc------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence            5544556666778888888888876654321  11      2233545555555554 4444568999999999988765


Q ss_pred             cc
Q 024405          264 NL  265 (268)
Q Consensus       264 ~~  265 (268)
                      ..
T Consensus       226 ~~  227 (260)
T TIGR00950       226 LA  227 (260)
T ss_pred             HH
Confidence            43

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.84  E-value=1.6e-18  Score=148.27  Aligned_cols=236  Identities=13%  Similarity=0.193  Sum_probs=160.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH
Q 024405           10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF   89 (268)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (268)
                      ....+...++|...    ....|..++  +++ |..+.++|+.++.+.+.+..+    +++      .+++.....++..
T Consensus         6 ~l~~l~~~~~Wg~~----~~~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~----~~~------~~~~~~~~~g~~~   68 (299)
T PRK11453          6 GVLALLVVVVWGLN----FVVIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVA----RPK------VPLNLLLGYGLTI   68 (299)
T ss_pred             HHHHHHHHHHHhhh----HHHHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhc----CCC------CchHHHHHHHHHH
Confidence            34444555555544    445598887  688 999999999987766544321    111      1223344445543


Q ss_pred             -HHHHHHhhhhhcc-cchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc---cchhHHHHHHH
Q 024405           90 -CINIVLGNVSLRY-IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFCAA  164 (268)
Q Consensus        90 -~~~~~~~~~al~~-~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~  164 (268)
                       .+...+.+.+++| .+++.++++.++.|+++.+++++++|||+++++++++++.++|+.++..++   .+.+..|+.++
T Consensus        69 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~  148 (299)
T PRK11453         69 SFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLT  148 (299)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHH
Confidence             3444566778887 688999999999999999999999999999999999999999999876532   22346799999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCC-CChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHH
Q 024405          165 LFGCLATSTKTILAESLLHSYK-FDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCL  243 (268)
Q Consensus       165 l~s~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (268)
                      +.++++|+.|.+++||..++.+ .+......++...+.+...+.....|++.... .+....++..|..+.+.++.+...
T Consensus       149 l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t~~  227 (299)
T PRK11453        149 LAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVATIV  227 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999765432 22334445555555554444444444322110 011122445577777777777766


Q ss_pred             HH-HHHHHHhccCcchhhhcc
Q 024405          244 NF-SIFYVIHSTTAVTFNVAG  263 (268)
Q Consensus       244 ~~-~~~~~i~~~sa~t~sv~~  263 (268)
                      .+ ..++.+++.+|.+.+...
T Consensus       228 ~~~l~~~~l~~~~a~~~s~~~  248 (299)
T PRK11453        228 GYGIWGTLLGRYETWRVAPLS  248 (299)
T ss_pred             HHHHHHHHHHhCCHHHHHHHH
Confidence            55 447889999998877654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.84  E-value=1.3e-18  Score=148.60  Aligned_cols=229  Identities=14%  Similarity=0.134  Sum_probs=156.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH
Q 024405           10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF   89 (268)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (268)
                      ....+..+++|..    .....|..++  ++| |..+.++|+.++.+++.+..   + ++  +. ++++++..+..++.+
T Consensus         6 ~l~~l~a~~~Wg~----~~~~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~---~-~~--~~-~~~~~~~~~~~~l~~   71 (295)
T PRK11689          6 TLIGLIAILLWST----MVGLIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTV---G-FP--RL-RQFPKRYLLAGGLLF   71 (295)
T ss_pred             hHHHHHHHHHHHH----HHHHHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHc---c-cc--cc-ccccHHHHHHHhHHH
Confidence            3344455555554    4455699888  588 99999999999988876542   1 11  11 122334444444445


Q ss_pred             HHHHHHhhhhhc----ccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc-----------
Q 024405           90 CINIVLGNVSLR----YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-----------  154 (268)
Q Consensus        90 ~~~~~~~~~al~----~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----------  154 (268)
                      .+...+.+.+++    +.+++.++++.++.|+++.+++++++|||++++++.+++++++|+.++..++.           
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~  151 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNI  151 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcc
Confidence            666666666664    46788889999999999999999999999999999999999999998865432           


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHH
Q 024405          155 SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIF  234 (268)
Q Consensus       155 ~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (268)
                      ..+..|++++++++++||.|.++.||..++  .++.....   ..+.+.+.+.....+++ ..+      .++..|..+.
T Consensus       152 ~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~-~~~------~~~~~~~~l~  219 (295)
T PRK11689        152 ASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQP-AMV------FSLPAIIKLL  219 (295)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCc-ccc------CCHHHHHHHH
Confidence            123569999999999999999999997554  45554322   33334444433333221 111      1233355555


Q ss_pred             HHHHHHHHHHHHHHHHHhccCcchhhhccc
Q 024405          235 SSGVLAFCLNFSIFYVIHSTTAVTFNVAGN  264 (268)
Q Consensus       235 ~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~  264 (268)
                      +.++.+....+..++.+|+.+|...+....
T Consensus       220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~  249 (295)
T PRK11689        220 LAAAAMGFGYAAWNVGILHGNMTLLATASY  249 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Confidence            666655555667789999999998887543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.83  E-value=1.1e-18  Score=148.99  Aligned_cols=244  Identities=13%  Similarity=0.087  Sum_probs=158.8

Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCc--ccChhhh
Q 024405            1 MEASLCTWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI--TVEPEDR   78 (268)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~   78 (268)
                      |+++...+.....+....+|....    ...|.. +  +++ |..+.++|+.++.+++.++...+++++..  +.+.+++
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~----~~~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~   72 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAP----AYFKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQK   72 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHH----HHHHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHH
Confidence            333333334444455555555444    344875 3  588 99999999999988776655433211110  0111223


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhH
Q 024405           79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNM  158 (268)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  158 (268)
                      +......++..+..+.+.++|++++|++.++++.++.|+++.+++++++|||++++++.+++++++|+.++..++.+.  
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~--  150 (296)
T PRK15430         73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL--  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence            333334455567889999999999999999999999999999999999999999999999999999999876433222  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHH
Q 024405          159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  238 (268)
Q Consensus       159 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
                        ..++++++++||.|.+..|+..++...+......++.+.+.+...+.   .++. ...+   ...+...+..+...++
T Consensus       151 --~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~---~~~~~~~~~~~~~~g~  221 (296)
T PRK15430        151 --PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TSHM---GQNPMSLNLLLIAAGI  221 (296)
T ss_pred             --cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-cccc---cCCcHHHHHHHHHHHH
Confidence              14688899999999999998654322333444455555554443221   1211 1111   1111122344555555


Q ss_pred             HHHHHHHHHHHHHhccCcchhhhcc
Q 024405          239 LAFCLNFSIFYVIHSTTAVTFNVAG  263 (268)
Q Consensus       239 ~~~~~~~~~~~~i~~~sa~t~sv~~  263 (268)
                      .+....++.++.+++.+|.+.|...
T Consensus       222 ~t~i~~~~~~~a~~~~~a~~~s~~~  246 (296)
T PRK15430        222 VTTVPLLCFTAAATRLRLSTLGFFQ  246 (296)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            5556666778999999999888764

>TIGR00688 rarD rarD protein

Probab=99.82  E-value=4.1e-18  Score=142.58  Aligned_cols=226  Identities=8%  Similarity=0.021  Sum_probs=149.1

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC--cc---cChhhhhHHHHHHHHHHHHHHHH
Q 024405           21 WVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL--IT---VEPEDRWRRIFPMSFVFCINIVL   95 (268)
Q Consensus        21 ~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~   95 (268)
                      .+.+.......|+ .+  +.+ |..+.++|++++.+++.++...+++++.  ++   .++++.+......+++.+++..+
T Consensus        11 ~~~wg~~~~~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   86 (256)
T TIGR00688        11 SFLFGYMYYYSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWL   86 (256)
T ss_pred             HHHHHHHHHHHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence            3334444455687 44  488 9999999999998887665544332110  11   11122234455677778889999


Q ss_pred             hhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHHHHHHHHHHHHHHHH
Q 024405           96 GNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKT  175 (268)
Q Consensus        96 ~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~  175 (268)
                      .+.|+++++++.++++.+++|+++++++++++|||++++++.+++++++|+.++..++.+.+    .+++.++++|+.|.
T Consensus        87 ~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~  162 (256)
T TIGR00688        87 FIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYG  162 (256)
T ss_pred             HHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999997754332222    35788999999999


Q ss_pred             HHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 024405          176 ILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTT  255 (268)
Q Consensus       176 i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  255 (268)
                      +..|+..++   +..+.... .....+...+.....++... +..    .+...|..+.+.|+.+.......++.+++.+
T Consensus       163 i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~  233 (256)
T TIGR00688       163 LIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFATV-QQT----NPFPIWLLLVLAGLITGTPLLAFVIAANRLP  233 (256)
T ss_pred             HHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccCcc-ccc----CchhHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            999986432   22222221 11111122211111121110 100    1112355556666666555666789999999


Q ss_pred             cchhhhcc
Q 024405          256 AVTFNVAG  263 (268)
Q Consensus       256 a~t~sv~~  263 (268)
                      |.+.++..
T Consensus       234 a~~~s~~~  241 (256)
T TIGR00688       234 LNLLGLLQ  241 (256)
T ss_pred             hHHHHHHH
Confidence            99887754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.79  E-value=8.5e-17  Score=137.20  Aligned_cols=229  Identities=11%  Similarity=0.062  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHH
Q 024405           11 FRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFC   90 (268)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (268)
                      .+...+..+=.++........|++++  +++ |..+.++|+.++.+++.++.+.++  +  +. ++++++..+..+++..
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~--~--~~-~~~~~~~~~~~g~~~~   82 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWR--L--RF-AKEQRLPLLFYGVSLG   82 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHh--c--cC-CHHHHHHHHHHHHHHH
Confidence            44444444444444455557899998  588 999999999999988876543211  1  22 3456666777888788


Q ss_pred             HHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc--c-cchhHHHHHHHHHH
Q 024405           91 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT--E-LSFNMFGFCAALFG  167 (268)
Q Consensus        91 ~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~s  167 (268)
                      ....+.+++++|+|++.++++..+.|+++.+++.    |++++.+  .+.+.++|+.++...  + .+.+..|+++++++
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~--~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~a  156 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFV--WVVLAVLGLWFLLPLGQDVSHVDLTGAALALGA  156 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHH--HHHHHHHHHheeeecCCCcccCChHHHHHHHHH
Confidence            8888899999999999999999999999998873    5655544  455678898876532  2 23456899999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHHH-H
Q 024405          168 CLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNF-S  246 (268)
Q Consensus       168 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  246 (268)
                      +++|+.|.+..||..++  .++... .++...+.+.+.|+....+...  .      .++..+....+.++.+....+ .
T Consensus       157 a~~~a~~~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--~------~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        157 GACWAIYILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAGEA--L------WHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             HHHHHHHHHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccCcc--c------CCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998664  455554 4566777777777666543211  1      122334444456666655555 5


Q ss_pred             HHHHHhccCcchhhhccc
Q 024405          247 IFYVIHSTTAVTFNVAGN  264 (268)
Q Consensus       247 ~~~~i~~~sa~t~sv~~~  264 (268)
                      .++.+++.+|...|+...
T Consensus       226 ~~~~~~~~~a~~as~~~~  243 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMS  243 (293)
T ss_pred             HHHHHHhcChhHHHHHHH
Confidence            689999999999887654

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.3e-16  Score=130.57  Aligned_cols=253  Identities=16%  Similarity=0.176  Sum_probs=197.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhH
Q 024405            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQK------LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWR   80 (268)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~------~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~   80 (268)
                      .++....++.+...+++......+.+-+.++      ..|++|.++.+.|-+.+.++...+...++..    .+.+++++
T Consensus         9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~   84 (327)
T KOG1581|consen    9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLY   84 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchh
Confidence            4455666667777777777777777766653      3488999999999999999887665543222    33466788


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc-------
Q 024405           81 RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-------  153 (268)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-------  153 (268)
                      ....+++.+..+..++..|++|++-|...+.|++.-+.+++.+.++.|+|++..++.+..++.+|+.+....+       
T Consensus        85 ~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~  164 (327)
T KOG1581|consen   85 KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSK  164 (327)
T ss_pred             HHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccc
Confidence            8888999999999999999999999999999999999999999999999999999999999999999876532       


Q ss_pred             --cchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcccc-ccccccCCCCchHHH
Q 024405          154 --LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSG-IMDWLSTHPSPWSAF  230 (268)
Q Consensus       154 --~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (268)
                        .+.++.|+.++....+.+++-+..++++.+++++++++++++.++++.+......+..+... -.++...|+.  ..+
T Consensus       165 ~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~--~~~  242 (327)
T KOG1581|consen  165 SGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPD--VAF  242 (327)
T ss_pred             cCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChh--HHH
Confidence              13468999999999999999999999999999999999999999999998887744433211 1122222222  223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCcchhhhccccc
Q 024405          231 IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLK  266 (268)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k  266 (268)
                      .++.++...+.++ ...++.+++.+|++.+.+.+.|
T Consensus       243 Di~l~s~~gavGQ-~FI~~TI~~FGslt~t~I~ttR  277 (327)
T KOG1581|consen  243 DILLYSTCGAVGQ-LFIFYTIERFGSLTFTTIMTTR  277 (327)
T ss_pred             HHHHHHHhhhhhh-heehhhHhhcccHHHHHHHHHH
Confidence            4444444444444 4468999999999999887765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.2e-18  Score=135.86  Aligned_cols=250  Identities=16%  Similarity=0.198  Sum_probs=196.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhc---------CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhH
Q 024405           10 VFRSLLAILQWWVFNVTVIITNKWIFQK---------LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWR   80 (268)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~K~~~~~---------~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~   80 (268)
                      +.+.........+|.....+..+.+.+.         ..|+|.+.+.+.|+.+..+..-+...+   ++..+.+ +.+-+
T Consensus        11 r~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~i---r~~~~~D-~t~~~   86 (337)
T KOG1580|consen   11 RGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLI---RKKTEID-NTPTK   86 (337)
T ss_pred             ccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheee---ccccccc-CCcch
Confidence            3344444444455555555555666552         248899999999999999887655444   2323333 33445


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc------
Q 024405           81 RIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL------  154 (268)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------  154 (268)
                      .....++-|-+.+...|.|++|+|.|...+-|++.|+-+++++..+.|++++|++++++.++++|+++.-..|.      
T Consensus        87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e  166 (337)
T KOG1580|consen   87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAE  166 (337)
T ss_pred             HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCc
Confidence            56668888999999999999999999999999999999999999999999999999999999999999877642      


Q ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcc-ccccccccCCCCchHHHHH
Q 024405          155 -SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEG-SGIMDWLSTHPSPWSAFII  232 (268)
Q Consensus       155 -~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  232 (268)
                       +..-.|-++.++|....++-...++++.+++..+..++++++++++.+.+.....++++ ++...+..-   .|..|+-
T Consensus       167 ~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R---hP~~~~~  243 (337)
T KOG1580|consen  167 DKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR---HPYVFWD  243 (337)
T ss_pred             ccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh---ccHHHHH
Confidence             12247899999999999999999999998888888999999999999998887777643 233222222   2445777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCcchhhhccccc
Q 024405          233 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLK  266 (268)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k  266 (268)
                      +.+-++++....+..|..+...+|++-|++.+.|
T Consensus       244 l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTR  277 (337)
T KOG1580|consen  244 LTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTR  277 (337)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehH
Confidence            8888889999999999999999999999988765

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.71  E-value=8.8e-16  Score=128.93  Aligned_cols=254  Identities=13%  Similarity=0.169  Sum_probs=185.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHH------HHhhcC--C---------
Q 024405            7 TWSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVI------KVLKLK--P---------   69 (268)
Q Consensus         7 ~~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~------~~~~~~--~---------   69 (268)
                      +|+....+.+.++..+.++....+.+.++++++|+-|+++++.....-.+.+..+.      +...++  +         
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            55566777777778888899999999999988887799988776433333333211      111000  0         


Q ss_pred             ---------------------------------C--------------c--ccChh------------hhhHHHHHHHHH
Q 024405           70 ---------------------------------L--------------I--TVEPE------------DRWRRIFPMSFV   88 (268)
Q Consensus        70 ---------------------------------~--------------~--~~~~~------------~~~~~~~~~~~~   88 (268)
                                                       .              +  +.+.|            +..+..+..+.+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                             0              0  00011            345566667777


Q ss_pred             HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc--------chhHHH
Q 024405           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------SFNMFG  160 (268)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G  160 (268)
                      ....++..|.|+++++++..+++.+++-+|+..++.++..||+++.|.+++.+.++|+++++.+|.        +....|
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG  248 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG  248 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence            889999999999999999999999999999999999999999999999999999999999987742        223689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccC--CCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHH
Q 024405          161 FCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  238 (268)
Q Consensus       161 ~~~~l~s~~~~a~~~i~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
                      .++++.|++.||+|.++.||...++  +.|.-....+..++..+++-|.....+....+.+..++..  .+-..++.+.+
T Consensus       249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~--q~~~vv~~~li  326 (416)
T KOG2765|consen  249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSST--QFSLVVFNNLI  326 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCc--eeEeeeHhhHH
Confidence            9999999999999999999987665  5666666778888888888887777664433233222222  22334455555


Q ss_pred             HHHHHHHHHHHHHhccCcchhhhc
Q 024405          239 LAFCLNFSIFYVIHSTTAVTFNVA  262 (268)
Q Consensus       239 ~~~~~~~~~~~~i~~~sa~t~sv~  262 (268)
                      ..+.--|...+..-.|+|++.++.
T Consensus       327 gtvvSDylW~~a~~lTs~Lv~Tlg  350 (416)
T KOG2765|consen  327 GTVVSDYLWAKAVLLTSPLVVTLG  350 (416)
T ss_pred             HHHHHHHHHHHHHHhccchhheee
Confidence            556667777788889999887653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.68  E-value=1.4e-14  Score=122.88  Aligned_cols=228  Identities=9%  Similarity=0.003  Sum_probs=143.7

Q ss_pred             HHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 024405           23 FNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRY  102 (268)
Q Consensus        23 ~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  102 (268)
                      +.......+|...++   +.|  ...++...+.+++.+....+..++..+.++++.+......+........+.+.++++
T Consensus        12 ~~a~~~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   86 (281)
T TIGR03340        12 MHAGWNLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHH   86 (281)
T ss_pred             HHHHHHHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            333444556765553   223  246666666666655544321111112123444555555666678889999999999


Q ss_pred             cchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc-cchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024405          103 IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAALFGCLATSTKTILAESL  181 (268)
Q Consensus       103 ~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~i~~k~~  181 (268)
                      .+++.++.+.++.|+++.+++++++|||+++++++|+.++++|+.++..++ ...+..|+.+++.++++|+.|.+..|+.
T Consensus        87 ~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~  166 (281)
T TIGR03340        87 ADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAA  166 (281)
T ss_pred             CChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccc
Confidence            999999999999999999999999999999999999999999999776443 2345678889999999999999988876


Q ss_pred             hccCCCChHH----HHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Q 024405          182 LHSYKFDSIN----TVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAV  257 (268)
Q Consensus       182 ~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~  257 (268)
                      .++  .++..    .+.+.....+..+.+.....++..   +.   ..+...+.....+++.+...+...++.+++.++.
T Consensus       167 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~  238 (281)
T TIGR03340       167 ALG--VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS---MF---PYARQILPSATLGGLMIGGAYALVLWAMTRLPVA  238 (281)
T ss_pred             ccc--hhcccccHHHHHHHHHHHHHHHHHHHHHHhccc---hh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCce
Confidence            433  22221    222222222111122111112111   10   1112234445555565656566778999999987


Q ss_pred             hhhhcc
Q 024405          258 TFNVAG  263 (268)
Q Consensus       258 t~sv~~  263 (268)
                      ..+...
T Consensus       239 ~~~~~~  244 (281)
T TIGR03340       239 TVVALR  244 (281)
T ss_pred             EEEeec
Confidence            766543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.67  E-value=2.6e-15  Score=123.91  Aligned_cols=171  Identities=20%  Similarity=0.290  Sum_probs=140.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc-
Q 024405           76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-  154 (268)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-  154 (268)
                      +++.......+++|+..+.+.+.++++++++.+++++.+..+++++++++++|||.+++||.++.+.+.|+.+...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3455566678889999999999999999999999999999999999999999999999999999999999998754321 


Q ss_pred             --------c--------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccc
Q 024405          155 --------S--------FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMD  218 (268)
Q Consensus       155 --------~--------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  218 (268)
                              +        ....|+++.+.++++.++..++.+|++|+.+.+.+..+......|.+..++.....|+.+..+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~  173 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE  173 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence                    1        125899999999999999999999999998888888888888899888888766666544433


Q ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHHH
Q 024405          219 WLSTHPSPWSAFIIIFSSGVLAFCLNFS  246 (268)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (268)
                      ....+++++..|..+...++.|....+.
T Consensus       174 ~g~f~G~~~~~~~~i~~~a~gGllva~v  201 (244)
T PF04142_consen  174 SGFFHGYSWWVWIVIFLQAIGGLLVAFV  201 (244)
T ss_pred             CCchhhcchHHHHHHHHHHHhhHHHHHH
Confidence            3333455666777788888877776544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.62  E-value=1.7e-15  Score=122.01  Aligned_cols=243  Identities=14%  Similarity=0.173  Sum_probs=196.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHh
Q 024405           18 LQWWVFNVTVIITNKWIFQKLDFK-FPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLG   96 (268)
Q Consensus        18 ~~~~~~s~~~~~~~K~~~~~~~f~-~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (268)
                      ....+....-..+.++++++.+|. |.|.+++.|+.+-..+.++.+..  .+++   ++..+|+....++.+..+++.+.
T Consensus        49 ~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~~~k---~r~iP~rtY~~la~~t~gtmGLs  123 (367)
T KOG1582|consen   49 AGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--IQTK---RRVIPWRTYVILAFLTVGTMGLS  123 (367)
T ss_pred             hHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--eccc---ceecchhHhhhhHhhhhhccccC
Confidence            333444445567789999988888 89999999998876555444332  2222   13457788888999999999999


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc----cchhHHHHHHHHHHHHHHH
Q 024405           97 NVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE----LSFNMFGFCAALFGCLATS  172 (268)
Q Consensus        97 ~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s~~~~a  172 (268)
                      |-|+.|++.|...+.|++..+-+++.+.++-++|+.+.++.+..++..|..+....|    .+++..|+.+.-.+.++.|
T Consensus       124 n~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA  203 (367)
T KOG1582|consen  124 NGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADA  203 (367)
T ss_pred             cCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988766    3567899999999999999


Q ss_pred             HHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024405          173 TKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIH  252 (268)
Q Consensus       173 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  252 (268)
                      +-..++++.++.++-+.-++++|....|.+.++.+...+++. ...|....++++..+....+-+..++.....-...++
T Consensus       204 ~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~-f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~  282 (367)
T KOG1582|consen  204 VIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGEL-FSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIK  282 (367)
T ss_pred             HhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccc-hhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHH
Confidence            999999999988777888999999999999998888877542 2345544455555566667777777777777788999


Q ss_pred             ccCcchhhhccccc
Q 024405          253 STTAVTFNVAGNLK  266 (268)
Q Consensus       253 ~~sa~t~sv~~~~k  266 (268)
                      ..+|.+...+.+.|
T Consensus       283 ~fGA~~aatvTTaR  296 (367)
T KOG1582|consen  283 LFGALIAATVTTAR  296 (367)
T ss_pred             HhchhHHHHHHHhH
Confidence            99999888777665

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.60  E-value=2.1e-12  Score=109.45  Aligned_cols=233  Identities=17%  Similarity=0.202  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHH
Q 024405           14 LLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINI   93 (268)
Q Consensus        14 ~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (268)
                      ....+++...+.......|...+. ..+ +......|+..+.+....... +++....+ ..++.++..+..++......
T Consensus         9 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           9 LLALLLWGLLWGLSFIALKLAVES-LDP-FLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-cCC-hHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHHHHHHHH
Confidence            334444445555555555666663 133 555666699888877332222 11111111 11223345555666668888


Q ss_pred             HHhhhhhcccchhHHHHHHhHHHHHHHHHHH-HHhheecCcchhhhhhheeehheeeeccccch---hHHHHHHHHHHHH
Q 024405           94 VLGNVSLRYIPVSFMQTIKSFTPATTVVLQW-LVWRKYFDWRIWASLVPIVGGILLTSVTELSF---NMFGFCAALFGCL  169 (268)
Q Consensus        94 ~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~  169 (268)
                      .+.+.++++++++.++.+.++.|+++.+++. +++|||++++++.+..+.+.|+.++..++...   +..|+.+++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~  164 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAAL  164 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999997 66799999999999999999999998766443   3589999999999


Q ss_pred             HHHHHHHHHHHHhccCCCChHHHHH-HHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHH-HHHHH
Q 024405          170 ATSTKTILAESLLHSYKFDSINTVY-YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC-LNFSI  247 (268)
Q Consensus       170 ~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  247 (268)
                      +++++.+..|+..   +.++..... ++..  ...+.......++..       .......+..+...++.+.. ..+..
T Consensus       165 ~~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~  232 (292)
T COG0697         165 LWALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLW  232 (292)
T ss_pred             HHHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999976   345555555 3333  222222222222111       11123346666777777765 44455


Q ss_pred             HHHHhccCcchhhhc
Q 024405          248 FYVIHSTTAVTFNVA  262 (268)
Q Consensus       248 ~~~i~~~sa~t~sv~  262 (268)
                      ++..++.++...+..
T Consensus       233 ~~~~~~~~~~~~~~~  247 (292)
T COG0697         233 YYALRLLGASLVALL  247 (292)
T ss_pred             HHHHHhcCchHHHHH
Confidence            788999998877654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.58  E-value=2e-13  Score=110.70  Aligned_cols=247  Identities=14%  Similarity=0.122  Sum_probs=177.6

Q ss_pred             HHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCc-----------ccChhhhhHHHHH
Q 024405           21 WVFNVTVIITNKWIFQK-----LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI-----------TVEPEDRWRRIFP   84 (268)
Q Consensus        21 ~~~s~~~~~~~K~~~~~-----~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~   84 (268)
                      ....+.-+++.||.-+.     .+|++|...+..-|+--.+++..+...+.+...+           +.+++-+.+..+|
T Consensus        12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~   91 (372)
T KOG3912|consen   12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP   91 (372)
T ss_pred             hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence            34445556788998662     4588898887766665556655544333221111           1111334566778


Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc----------
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL----------  154 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----------  154 (268)
                      .+++...+..+.+.++.+++++.+|+++-...+|+.+++.-+++++.+.+||.++.....|++.+...|.          
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            8999999999999999999999999999999999999999999999999999999999999998865431          


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccc----c--------ccccccC
Q 024405          155 SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGS----G--------IMDWLST  222 (268)
Q Consensus       155 ~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~--------~~~~~~~  222 (268)
                      +.-..|+.+.+.+-+..|.+.++.+|.+++++.+|.+...|...+|.+++...+......    .        .+||.+.
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~  251 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA  251 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH
Confidence            222589999999999999999999999999999999999999999977665444433211    1        1122110


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhcccccC
Q 024405          223 ---HPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKV  267 (268)
Q Consensus       223 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k~  267 (268)
                         ....+.....+....+.--+.|++.....|..|+.|-.+...+|+
T Consensus       252 ~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt  299 (372)
T KOG3912|consen  252 FAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRT  299 (372)
T ss_pred             HHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhh
Confidence               011222222222333333467899999999999999998877764

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.53  E-value=7.4e-12  Score=105.46  Aligned_cols=230  Identities=13%  Similarity=0.197  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCc-hHHHHHHHHHHHHHHHHHHHHHhh----cCCCcccCh-----hhhhHHHHHHH
Q 024405           17 ILQWWVFNVTVIITNKWIFQKLDFKF-PLSVSCIHFICSSIGAYLVIKVLK----LKPLITVEP-----EDRWRRIFPMS   86 (268)
Q Consensus        17 ~~~~~~~s~~~~~~~K~~~~~~~f~~-p~~l~~~r~~~~~l~l~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~   86 (268)
                      .+.-.+.+.++.+..||.-++.+.+| |.+..++-=.+-.+++........    ++..+.+++     +++-.+....+
T Consensus        20 l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa   99 (345)
T KOG2234|consen   20 LIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPA   99 (345)
T ss_pred             HHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHH
Confidence            33444677788888888877543332 777766665555555544433221    121112211     22344455678


Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc---c--------cc
Q 024405           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---E--------LS  155 (268)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~---~--------~~  155 (268)
                      +.|+..+.+.+.++.+.+++.+++........|++++++++|||.+++||.++++.++|+.+.-.+   +        .+
T Consensus       100 ~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~  179 (345)
T KOG2234|consen  100 LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQ  179 (345)
T ss_pred             HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCccc
Confidence            889999889999999999999999999999999999999999999999999999999999987621   1        12


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHH
Q 024405          156 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS  235 (268)
Q Consensus       156 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (268)
                      ..+.|....+.++...++..++.+|++|+.+.+.+..+...+.+|.+..+......|+.+....-..+++++..|..++.
T Consensus       180 n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~  259 (345)
T KOG2234|consen  180 NPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLL  259 (345)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHH
Confidence            34789999999999999999999999999888888888888899988888887777766554222356677788888888


Q ss_pred             HHHHHHHHHHH
Q 024405          236 SGVLAFCLNFS  246 (268)
Q Consensus       236 ~~~~~~~~~~~  246 (268)
                      ++..|....+.
T Consensus       260 ~a~gGLlvs~v  270 (345)
T KOG2234|consen  260 NAVGGLLVSLV  270 (345)
T ss_pred             HhccchhHHHH
Confidence            88888776554

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.47  E-value=2.5e-13  Score=104.68  Aligned_cols=109  Identities=34%  Similarity=0.546  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-----CCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccC----C-CCchHH
Q 024405          160 GFCAALFGCLATSTKTILAESLLHS-----YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLST----H-PSPWSA  229 (268)
Q Consensus       160 G~~~~l~s~~~~a~~~i~~k~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~-~~~~~~  229 (268)
                      |.++++.|.++.++++++.|+.+++     .+.++.++.+|+++.+.+.+.|..+..|+++..+....    + ..+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999887     68999999999999999999999999988764322211    1 114567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCcchhhhcccccCC
Q 024405          230 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVR  268 (268)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k~~  268 (268)
                      +..+..+|++++..|++.+++++++||+|.+++|++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~  119 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRI  119 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHH
Confidence            889999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.42  E-value=5.6e-13  Score=107.85  Aligned_cols=227  Identities=15%  Similarity=0.244  Sum_probs=170.6

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcc-cchhHH
Q 024405           30 TNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRY-IPVSFM  108 (268)
Q Consensus        30 ~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~  108 (268)
                      .-+.+.++ +=+.-..+++.||++-..--++..     .+....+++-+.|.....-..+...+...|+++++ ++.|..
T Consensus        21 ~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~-----skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlH   94 (330)
T KOG1583|consen   21 FLELLVRN-EPGSGNLITFAQFLFIATEGLIFT-----SKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLH   94 (330)
T ss_pred             HHHHHHHh-CCCCeeehHHHHHHHHHHhceeee-----ccccccCCCCchhhhheehheeeeeeeeccceeeecccceEE
Confidence            34666664 222356899999988776554432     12222333445566666666677888999999999 799999


Q ss_pred             HHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc---ccc--------h------h--HHHHHHHHHHHH
Q 024405          109 QTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT---ELS--------F------N--MFGFCAALFGCL  169 (268)
Q Consensus       109 ~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~---~~~--------~------~--~~G~~~~l~s~~  169 (268)
                      -+.++..++-++++++++.|+|++.+|+.++.+..+|+.+.+..   |..        .      -  ..|+.+...+.+
T Consensus        95 iIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen   95 IIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             EEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987542   210        0      1  379999999999


Q ss_pred             HHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccc-----------cCCCCchHHHHHHHHHHH
Q 024405          170 ATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWL-----------STHPSPWSAFIIIFSSGV  238 (268)
Q Consensus       170 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  238 (268)
                      ..|...+++++.+++++-|+-|.++|+...+.+..    .+..++-..+|.           .....-|..|..+..+++
T Consensus       175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~F----lf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L  250 (330)
T KOG1583|consen  175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLF----LFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL  250 (330)
T ss_pred             HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchH----HHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH
Confidence            99999999999999998999999999998776543    333322111111           111224678889999999


Q ss_pred             HHHHHHHHHHHHHhccCcchhhhccccc
Q 024405          239 LAFCLNFSIFYVIHSTTAVTFNVAGNLK  266 (268)
Q Consensus       239 ~~~~~~~~~~~~i~~~sa~t~sv~~~~k  266 (268)
                      ..+...-.-+.+..+++++|.+++=++|
T Consensus       251 ~Qy~CikgVy~L~te~~sLTVTlvltlR  278 (330)
T KOG1583|consen  251 TQYFCIKGVYILTTETSSLTVTLVLTLR  278 (330)
T ss_pred             HHHHHHHhhhhhhceecceEEEEeeeHH
Confidence            9888877778899999999999987665

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.35  E-value=2.2e-12  Score=95.62  Aligned_cols=120  Identities=20%  Similarity=0.462  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHH-HHHHHHHhhhhhccc
Q 024405           25 VTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV-FCINIVLGNVSLRYI  103 (268)
Q Consensus        25 ~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~  103 (268)
                      ......+|...+  ++| |....++|+..+.+ +.+.....++++..+. +++++......+.+ ..++..+.+.++++.
T Consensus         4 a~~~~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    4 AIYSVFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNL-SPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             eeHHHHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCC-ChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            345567799988  488 99999999999997 5554444343332233 34466666667776 589999999999999


Q ss_pred             chhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheee
Q 024405          104 PVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (268)
Q Consensus       104 ~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  149 (268)
                      +++.++.+.++.|+++.+++++++||++++++++++.++++|+.++
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998765

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.32  E-value=4.8e-10  Score=95.41  Aligned_cols=223  Identities=16%  Similarity=0.148  Sum_probs=146.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCIN   92 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (268)
                      ++..+++|....    ...|+..   +.+ |..+.  |..++.++...+....+. ++  .+.++.+..-+..++.++.+
T Consensus         6 ~lia~~~wGs~g----~~~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~~--~~~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         6 ALIPALFWGSFV----LINVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVL-PE--FWALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             HHHHHHHHhhhH----HHHhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhC-Cc--ccccHHHHHHHHHHHHHHhh
Confidence            344444554443    4446554   466 33333  677777766555444332 21  12244555566677778889


Q ss_pred             HHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhheecCcch----hhhhhheeehheeeeccccc-------hh-HH
Q 024405           93 IVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRI----WASLVPIVGGILLTSVTELS-------FN-MF  159 (268)
Q Consensus        93 ~~~~~~al~~~~~~~~~~l~~-~~pv~~~l~~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~  159 (268)
                      +.+++.|.++++++.+..+.+ .+|++..+.+.+++||+.++++    .+++++.++|+.+....+.+       .+ ..
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~  152 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKK  152 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhh
Confidence            999999999999999998888 8889999999999999999999    99999999999988653211       23 78


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHh---HHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHH
Q 024405          160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMA---PFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  236 (268)
Q Consensus       160 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (268)
                      |+++++.|+++++.|.+..|+.    +.+|.+..+.+.   ..+.....+..  .+.   .++      .....+...+.
T Consensus       153 Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~------~~~~~~~~~~~  217 (290)
T TIGR00776       153 GILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA---KPL------KKYAILLNILP  217 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--hcc---cch------HHHHHHHHHHH
Confidence            9999999999999999999975    257777744333   33333333222  110   011      11122333447


Q ss_pred             HHHHHHHHHHHHHHHh-ccCcchhhhcc
Q 024405          237 GVLAFCLNFSIFYVIH-STTAVTFNVAG  263 (268)
Q Consensus       237 ~~~~~~~~~~~~~~i~-~~sa~t~sv~~  263 (268)
                      |+.....+...+...+ +.++.+.++..
T Consensus       218 Gi~~~ia~~~y~~~~~~~~~~~~~~~ls  245 (290)
T TIGR00776       218 GLMWGIGNFFYLFSAQPKVGVATSFSLS  245 (290)
T ss_pred             HHHHHHHHHHHHHHcccccchhhHHHHH
Confidence            7775444555667677 77777766554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.30  E-value=2.7e-11  Score=87.08  Aligned_cols=134  Identities=18%  Similarity=0.100  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHH
Q 024405           15 LAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIV   94 (268)
Q Consensus        15 ~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (268)
                      ++.++-..+.....++.|..++  +.| |.+-+..|..+....+...+...|+......-.++.|..+...|+..+.+..
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            3444444555556688899999  688 9999999999888887776665444332211235678888888888899999


Q ss_pred             HhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           95 LGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        95 ~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      +++.|++.-.+|...-+..++|+++.+++++++|||++..+++++.++.+|+.+.+.
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999998764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.26  E-value=1.5e-09  Score=87.31  Aligned_cols=209  Identities=15%  Similarity=0.128  Sum_probs=160.5

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 024405           30 TNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQ  109 (268)
Q Consensus        30 ~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~  109 (268)
                      +-|.++.  .++ |.-.+++|..++.+++..+.+=+++    +. .++++......|......+.+.+.|++.+|.+.+.
T Consensus        30 ~Ak~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPwr~----r~-~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV  101 (292)
T COG5006          30 FAKSLFP--LVG-AAGVTALRLAIAALILLALFRPWRR----RL-SKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV  101 (292)
T ss_pred             HHHHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHHHh----cc-ChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence            4577777  466 9999999999999998876553221    22 46788889999999999999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 024405          110 TIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFCAALFGCLATSTKTILAESLLHSYK  186 (268)
Q Consensus       110 ~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~  186 (268)
                      .+-.+.|+.+..++.    ||  .++...+.+.+.|..+..-..   .+.|+.|..+++.+..||+.|.+..||.-+.  
T Consensus       102 AiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--  173 (292)
T COG5006         102 AIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--  173 (292)
T ss_pred             hhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--
Confidence            999999999887663    33  344455556777877664322   4678999999999999999999999998653  


Q ss_pred             CChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHHHHHHHH-HHHHhccCcchhhhc
Q 024405          187 FDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSI-FYVIHSTTAVTFNVA  262 (268)
Q Consensus       187 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~sa~t~sv~  262 (268)
                      .+....+..-+..+.++.+|+.....++.+.        ++.....-...++++...-|+. +..+++.++-++++.
T Consensus       174 ~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~--------~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~L  242 (292)
T COG5006         174 EHGTAGVAVGMLVAALIVLPIGAAQAGPALF--------SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTL  242 (292)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhhhhcchhhc--------ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHH
Confidence            4667778888899999999998866554433        3445566667777777777754 788888887776653

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.25  E-value=7.2e-13  Score=106.80  Aligned_cols=228  Identities=15%  Similarity=0.242  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCIN   92 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (268)
                      .....+. +.++..+....|.+.    ++ |....-.|+..-.++..++..+.+ .+.  ..++...+.+++.++....+
T Consensus        40 l~l~~vs-~ff~~~~vv~t~~~e----~~-p~e~a~~r~l~~mlit~pcliy~~-~~v--~gp~g~R~~LiLRg~mG~tg  110 (346)
T KOG4510|consen   40 LLLLTVS-YFFNSCMVVSTKVLE----ND-PMELASFRLLVRMLITYPCLIYYM-QPV--IGPEGKRKWLILRGFMGFTG  110 (346)
T ss_pred             ceehhhH-HHHhhHHHhhhhhhc----cC-hhHhhhhhhhhehhhhheEEEEEe-eee--ecCCCcEEEEEeehhhhhhH
Confidence            3344444 555666655555444    45 999998997776666655443322 121  12344555666788888888


Q ss_pred             HHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc--------------cchhH
Q 024405           93 IVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE--------------LSFNM  158 (268)
Q Consensus        93 ~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~--------------~~~~~  158 (268)
                      ..+.++|++|.+.+.++++..++|+++.+++++++||++++.+.++..+.+.||+++..++              .+.+.
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            9999999999999999999999999999999999999999999999999999999986532              12234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHH
Q 024405          159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  238 (268)
Q Consensus       159 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
                      .|.+.++.++..-|.-.++.|++-|+  .|....+.|....+.+...+.....+..   +++..    +..++++.-.|+
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~---~lP~c----gkdr~l~~~lGv  261 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAV---QLPHC----GKDRWLFVNLGV  261 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhccce---ecCcc----ccceEEEEEehh
Confidence            68888888888888888899988665  4555556666777777666655544422   22111    122455555566


Q ss_pred             HHHHHHHHHH--HHHhccCcch
Q 024405          239 LAFCLNFSIF--YVIHSTTAVT  258 (268)
Q Consensus       239 ~~~~~~~~~~--~~i~~~sa~t  258 (268)
                      .+++......  ..+++.+|+.
T Consensus       262 fgfigQIllTm~lQiErAGpva  283 (346)
T KOG4510|consen  262 FGFIGQILLTMGLQIERAGPVA  283 (346)
T ss_pred             hhhHHHHHHHHHhhhhccCCee
Confidence            6665544332  4466666654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.25  E-value=5e-09  Score=86.25  Aligned_cols=214  Identities=15%  Similarity=0.138  Sum_probs=144.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC-cc-cChhhhhHHHHHH
Q 024405            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL-IT-VEPEDRWRRIFPM   85 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~~   85 (268)
                      +.....+.+-.+|..    +-+..|.+-.   .+ |..+...|.+.+...+.+.....|+.+. .+ .++++.+......
T Consensus         7 ~Gil~~l~Ay~lwG~----lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~   78 (293)
T COG2962           7 KGILLALLAYLLWGL----LPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT   78 (293)
T ss_pred             chhHHHHHHHHHHHH----HHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence            334444554445544    4445566653   77 9999999999998888776655443321 11 1123345555556


Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccccchhHHHHHHHH
Q 024405           86 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL  165 (268)
Q Consensus        86 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l  165 (268)
                      +..-+.+...+.+|.++-.+=.++.=....|++.++++.+++|||+++.|++++.+..+||..-.....+.++....   
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~---  155 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA---  155 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH---
Confidence            67778999999999999888888888899999999999999999999999999999999999988888788876544   


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHHH
Q 024405          166 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  241 (268)
Q Consensus       166 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (268)
                       =++.+++|...=|+.    ++|+.+-...-...-.+..+......|+...  ..  ..++...+.++..+|..+.
T Consensus       156 -la~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~--~~~~~~~~~LLv~aG~vTa  222 (293)
T COG2962         156 -LALSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FL--QQNANSLWLLLVLAGLVTA  222 (293)
T ss_pred             -HHHHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hh--hcCCchHHHHHHHhhHHHH
Confidence             356788888666553    3566665555445444444555555543321  11  1112233555666665543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.17  E-value=4.7e-11  Score=95.85  Aligned_cols=198  Identities=13%  Similarity=0.210  Sum_probs=149.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHH
Q 024405            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSF   87 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (268)
                      ++.+..+...=.--.+..+..+.+.++-++ +.+-|..-+++....-.++--++..+++  +   . -+..|+..+..++
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~---~-~~~~~~hYilla~   86 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--K---Y-IKAKWRHYILLAF   86 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--H---H-HHHHHHHhhheeE
Confidence            333333333333334555555666776664 6888988888776655555444444422  1   1 2445666777787


Q ss_pred             HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecccc--------chhHH
Q 024405           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------SFNMF  159 (268)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~  159 (268)
                      ...=++++-..|.+|++....+.+-+-..+.+++++++++|.|+++.++.|++++++|+++....|.        +....
T Consensus        87 ~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~  166 (336)
T KOG2766|consen   87 VDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVK  166 (336)
T ss_pred             EeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCcc
Confidence            7777777888999999999999999999999999999999999999999999999999998865441        22358


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcccc
Q 024405          160 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSG  215 (268)
Q Consensus       160 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  215 (268)
                      |+++.++++-+||+-++..+.+-|+  .+..+++....++|.++..+- +..|..+
T Consensus       167 GD~lvi~GATlYaVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ-~i~~~~~  219 (336)
T KOG2766|consen  167 GDFLVIAGATLYAVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQ-FIFERHH  219 (336)
T ss_pred             CcEEEEecceeeeeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHH-Hhhhccc
Confidence            9999999999999999999988775  788999999999999988877 5555433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.13  E-value=1.2e-10  Score=85.03  Aligned_cols=107  Identities=18%  Similarity=0.377  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCc-ccChhhhhHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHH
Q 024405           48 CIHFICSSIGAYLVIKVLKLKPLI-TVEPEDRWRRIFPMSFVFC-INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL  125 (268)
Q Consensus        48 ~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~  125 (268)
                      .+|+.++.+++..+...+++.+.. +..+++++......+.... .+..+..+|+++.+ +.+..+.++.|+++.+++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            578888888887776664432211 1112344555555666664 88999999999999 58889999999999999999


Q ss_pred             HhheecCcchhhhhhheeehheeeeccccc
Q 024405          126 VWRKYFDWRIWASLVPIVGGILLTSVTELS  155 (268)
Q Consensus       126 ~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~  155 (268)
                      ++|||++++++.++.++++|+.++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999998877643

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.11  E-value=2.2e-10  Score=88.62  Aligned_cols=182  Identities=17%  Similarity=0.200  Sum_probs=135.4

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc-
Q 024405           75 PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-  153 (268)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-  153 (268)
                      -|...++..|.++++.+.++.+..+++.++++.++.+.++.-.|+.+++++++|+|+.--++.+.++.+.|++++.+.| 
T Consensus        49 ik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   49 IKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             eeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            3555677788899999999999999999999999999999999999999999999999999999999999999998544 


Q ss_pred             -cchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHH---HHHhccccccccccCCCCchHH
Q 024405          154 -LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIP---ALLLEGSGIMDWLSTHPSPWSA  229 (268)
Q Consensus       154 -~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                       ...++.|+..++.|+...|+|.+..|+...+-+.  -+..++++..|..-+...   ........++.|.....   ..
T Consensus       129 ~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~---~P  203 (290)
T KOG4314|consen  129 EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF--GDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAA---AP  203 (290)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhh---CC
Confidence             5578999999999999999999999998876433  344555555554333221   11111112222221111   12


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCcchhhh
Q 024405          230 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNV  261 (268)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~t~sv  261 (268)
                      |..+...+.+....|+.....+..+.|...|+
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISi  235 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISI  235 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhhee
Confidence            45555556666667777777777788877765

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.90  E-value=5.6e-08  Score=81.35  Aligned_cols=130  Identities=12%  Similarity=0.064  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH-HH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CI   91 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   91 (268)
                      ...+.++-.++........|...++.+-+ +.....+|+.++.+++.+.....+. + ... .++.+...+..+.+. ..
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-N-PQA-LSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc-chHHHHHHHHHHHHHHHH
Confidence            33444444455555566678888743333 4456667889888887766554322 1 122 244555555566654 78


Q ss_pred             HHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehh
Q 024405           92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGI  146 (268)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv  146 (268)
                      ...++++++++.+++.++.+.++.|+++.++++++++|+++..++.|..+++.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            8899999999999999999999999999999999999999999999999998886

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.50  E-value=5e-06  Score=63.72  Aligned_cols=132  Identities=12%  Similarity=0.051  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcc----cC------hhhhhHHH
Q 024405           18 LQWWVFNVTVIITNKWIFQK-----LDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT----VE------PEDRWRRI   82 (268)
Q Consensus        18 ~~~~~~s~~~~~~~K~~~~~-----~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~----~~------~~~~~~~~   82 (268)
                      +.-.++...-....|..+++     .+.+ |..+.......+.+.+.+.....+..+..+    ..      .++.+..+
T Consensus         6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (153)
T PF03151_consen    6 LASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLL   84 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHH
Confidence            33344555555677787776     5677 999999998888888887766544332111    00      12344555


Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           83 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      +..+++....+...+..++++++-.++++.....+.+.+++.++++|+++..++.|+.+.++|+.+.+
T Consensus        85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            55666677888899999999999999999999999999999999999999999999999999987654

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.49  E-value=3.5e-06  Score=73.76  Aligned_cols=129  Identities=14%  Similarity=0.158  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcc--cChhhhhHHHHHHHHHHHHHHHHhhhh
Q 024405           22 VFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLIT--VEPEDRWRRIFPMSFVFCINIVLGNVS   99 (268)
Q Consensus        22 ~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a   99 (268)
                      +++...+...|...+  +++.+...++++..++.+.+.+........+...  ..+......++-.++...+.+.+++++
T Consensus       199 ~~wa~~~il~~~~~~--~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~  276 (358)
T PLN00411        199 IFVSVSFILQAHIMS--EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWT  276 (358)
T ss_pred             HHHHHHHHHHHHHHH--HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444456677766  4664557778888777766554433322111110  001111112222334445677889999


Q ss_pred             hcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405          100 LRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus       100 l~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      +++.+++.+++.....|++++++++++++|+++..+++|.+++++|+.+...+
T Consensus       277 v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~  329 (358)
T PLN00411        277 VRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG  329 (358)
T ss_pred             HhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999987653

>TIGR00803 nst UDP-galactose transporter

Probab=98.48  E-value=3.7e-07  Score=74.73  Aligned_cols=160  Identities=15%  Similarity=0.035  Sum_probs=103.5

Q ss_pred             cchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc--------------------cc-------c
Q 024405          103 IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT--------------------EL-------S  155 (268)
Q Consensus       103 ~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~--------------------~~-------~  155 (268)
                      +++|.....++..|+++++.+....+||++..|+++..+...|+......                    +.       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            56788899999999999999999999999999999999999888743221                    10       2


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHH
Q 024405          156 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFS  235 (268)
Q Consensus       156 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (268)
                      ..+.|..+.+.+..+.++..+++++..|+++...+..+......+.+.........+.....++...++++...|..+..
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            34678888888889999999999998776544433333333334433222222222222222222233444444555544


Q ss_pred             HHHHHHHHHHHHHHHHhccCcchhhhccccc
Q 024405          236 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLK  266 (268)
Q Consensus       236 ~~~~~~~~~~~~~~~i~~~sa~t~sv~~~~k  266 (268)
                      +++.+.    +..+++|+.++.+.+++...+
T Consensus       162 ~a~~~~----~v~~vlk~~~~~~~~~~~~~~  188 (222)
T TIGR00803       162 NVGGGL----CIGGVVRYADNTTKSFVTALS  188 (222)
T ss_pred             HHhcCc----eeeehhHHhHHHHHHHHHHHH
Confidence            444333    356789999999888876553

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.44  E-value=1.6e-06  Score=62.73  Aligned_cols=64  Identities=20%  Similarity=0.360  Sum_probs=59.7

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      ..+.....+...++++.|.+.+..+-++.++++.+.+++++||++++++++++.++++|+.++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4467888999999999999999999999999999999999999999999999999999998764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.42  E-value=4.6e-06  Score=71.20  Aligned_cols=110  Identities=12%  Similarity=0.078  Sum_probs=85.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH-HHHHHHhhhhhcccchhHHHHHHhHHHHHHHH
Q 024405           43 PLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVLGNVSLRYIPVSFMQTIKSFTPATTVV  121 (268)
Q Consensus        43 p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l  121 (268)
                      |...+.+++.++.+.+.+.....+. +....+..+.+......+++. .+...++++++++.+++.++.+....|++.++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            5667788988888877665443221 111112234565666666654 68888999999999999999999999999999


Q ss_pred             HHHHHhheecCcchhhhhhheeehheeeeccc
Q 024405          122 LQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus       122 ~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      +++++++|+++..+++|..+++.|+.+....+
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998876543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.38  E-value=1e-05  Score=69.01  Aligned_cols=123  Identities=12%  Similarity=0.110  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH-HHHHHHhhhhh
Q 024405           22 VFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVLGNVSL  100 (268)
Q Consensus        22 ~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al  100 (268)
                      ++....+...|...+  +.+ |.... ++..++.+.+.+......  +.... ....+...+..+++. .+.+.++++++
T Consensus       158 ~~~a~~~v~~r~~~~--~~~-~~~~~-~~~~~~~~~l~~~~~~~~--~~~~~-~~~~~~~~l~lgv~~t~~~~~l~~~~~  230 (293)
T PRK10532        158 ACWAIYILSGQRAGA--EHG-PATVA-IGSLIAALIFVPIGALQA--GEALW-HWSILPLGLAVAILSTALPYSLEMIAL  230 (293)
T ss_pred             HHHHHHHHHHHHHhc--cCC-chHHH-HHHHHHHHHHHHHHHHcc--CcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333344455577655  345 66654 455556655555443321  11111 123343344566654 67888999999


Q ss_pred             cccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405          101 RYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus       101 ~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      ++.+++.++.+....|++..++++++++|+++..+++|..++++|+.....
T Consensus       231 ~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        231 TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999998887643

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.27  E-value=6.4e-06  Score=70.62  Aligned_cols=134  Identities=10%  Similarity=-0.033  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChh---------hhhHHHHHHHH
Q 024405           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPE---------DRWRRIFPMSF   87 (268)
Q Consensus        17 ~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~   87 (268)
                      +++-..++...+...|...++.+.+ |..++.++...+.+.+.+.....+..+.......         ..+...+..+.
T Consensus       150 ~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (302)
T TIGR00817       150 AMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM  228 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence            3333444444556667777643577 9999999999988887776554321110000000         01111111222


Q ss_pred             -HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           88 -VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        88 -~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                       .+...+.+.+.+++++++..+++.....|+++.++++++++|+++..+++|.+++++|+.+...
T Consensus       229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence             2233335666899999999999999999999999999999999999999999999999987654

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.17  E-value=3.3e-05  Score=66.02  Aligned_cols=75  Identities=16%  Similarity=0.251  Sum_probs=65.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      +.+...+..++...+.+.++++++++.+++..+...+..|++..++++++++|+++..+++|.++++.|+.+...
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            445555555555577899999999999999999999999999999999999999999999999999999877654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.14  E-value=7.4e-05  Score=63.97  Aligned_cols=134  Identities=13%  Similarity=0.068  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCC-----CcccChhhhhHHHHHHHHHH-HH
Q 024405           18 LQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP-----LITVEPEDRWRRIFPMSFVF-CI   91 (268)
Q Consensus        18 ~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~   91 (268)
                      +.=.+++...++..|...++++-+.......++...+.+.........+...     .... ..+.+...+-.+++. .+
T Consensus       149 l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~i~~t~~  227 (299)
T PRK11453        149 LAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLAFVATIV  227 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHHHHHHHHH
Confidence            3333444444556676654311111234445555555443332222211111     0112 234555555566555 67


Q ss_pred             HHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405           92 NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus        92 ~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      .+.+++.++++.+++.++.+....|++..++++++++|+++..+++|..++++|+.+...+
T Consensus       228 ~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        228 GYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            8889999999999999999999999999999999999999999999999999999876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.09  E-value=1.3e-05  Score=68.05  Aligned_cols=71  Identities=13%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehhee
Q 024405           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (268)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  148 (268)
                      .+......++...+.+.++++++++.+++..+...+..|++..+++++++||++++.+++|..++++|+.+
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            33334444455578899999999999999999999999999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.08  E-value=0.00011  Score=64.41  Aligned_cols=135  Identities=9%  Similarity=0.032  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC-----CCchHHHHHHHHHHHHHHHHHHHHHhhcCCCc--------ccCh---hhh
Q 024405           15 LAILQWWVFNVTVIITNKWIFQKLD-----FKFPLSVSCIHFICSSIGAYLVIKVLKLKPLI--------TVEP---EDR   78 (268)
Q Consensus        15 ~~~~~~~~~s~~~~~~~K~~~~~~~-----f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~--------~~~~---~~~   78 (268)
                      ..+++-.+++..-+...|..+++++     .+ +..+.......+.+.+++.....+..+..        ..+.   ...
T Consensus       197 ~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  275 (350)
T PTZ00343        197 WCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGII  275 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHH
Confidence            3333444555555667788777532     44 55566666778887777665433211100        0000   001


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           79 WRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      +...+..++.+.+.+...+.+++++++..+++.....|+++.++++++++|+++..+++|..++++|+.+.+
T Consensus       276 l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        276 IFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            111222222333333344469999999999999999999999999999999999999999999999997654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.90  E-value=0.00017  Score=61.67  Aligned_cols=70  Identities=7%  Similarity=0.045  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      ....++.....+.+.+.++++.+++..+.+.+..|++..+.++++++|+++..++.+..++++|+.+...
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4444555678899999999999999999999999999999999999999999999999999888876653

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.89  E-value=0.0014  Score=54.62  Aligned_cols=118  Identities=17%  Similarity=0.140  Sum_probs=94.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhheecCcchh----hhhhheeehheeeec
Q 024405           77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTSV  151 (268)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~~  151 (268)
                      ..+...+..+++++.+....+.|.++.++|.+--+. ..+-+.+.+.++++++|..+..++    .++++.++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            566777779999999999999999999988776554 578888999999999998776665    478889999999887


Q ss_pred             cccc--------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhH
Q 024405          152 TELS--------FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAP  198 (268)
Q Consensus       152 ~~~~--------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~  198 (268)
                      +|.+        ....|+...+++.+.|..|....|-.    +.|+++...=++.
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqai  173 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAI  173 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHH
Confidence            5521        23579999999999999999997652    4677777664433

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.87  E-value=0.00021  Score=60.96  Aligned_cols=126  Identities=11%  Similarity=-0.012  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHH----HHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFI----CSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFV   88 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (268)
                      .+.+.++=.++.......+|..    +.+ |...++.|..    .+.++....   +  +. ++.+.+..+. .+..+++
T Consensus       153 Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~---~--~~-~~~~~~~~~~-~~~~Gi~  220 (290)
T TIGR00776       153 GILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH---I--LA-KPLKKYAILL-NILPGLM  220 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH---h--cc-cchHHHHHHH-HHHHHHH
Confidence            4443333344444445566754    356 8887666655    333322222   1  11 1122233343 4447888


Q ss_pred             HHHHHHHhhhhhc-ccchhHHHHHHhHHHHHHHHHHHHHhheecCcchh----hhhhheeehheeee
Q 024405           89 FCINIVLGNVSLR-YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTS  150 (268)
Q Consensus        89 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~  150 (268)
                      ....+.++..+.+ +.+++.+.++.+..|+...+.+.+++||+.+++++    +|.++.++|+.+..
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            8888899999999 99999999999999999999999999999999999    99999988887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.73  E-value=7.7e-05  Score=55.40  Aligned_cols=72  Identities=17%  Similarity=0.219  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHH--HhheecCcchhhhhhheeehheeeeccc
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL--VWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      +...-..+.+...+++.+++..+.+.+.-+.+..++.+.+.++.  +++|+++..+++|+.++++|+.++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            44455567899999999999999999999999999889888885  8999999999999999999999887544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.61  E-value=0.0019  Score=54.40  Aligned_cols=77  Identities=17%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             hhhhHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405           76 EDRWRRIFPMSFVFC-INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus        76 ~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      ...+......+++.. ..+.+.+.+++..+++..+.+..+.|++..+.++++++|+++..++.|..++++|+.+....
T Consensus       211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            446666666777765 58999999999999999999999999999999999999999999999999999998876543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.52  E-value=0.0016  Score=55.81  Aligned_cols=138  Identities=10%  Similarity=0.111  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHH--hhcCC-Ccc--cChhhhhHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKV--LKLKP-LIT--VEPEDRWRRIFPMSF   87 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~--~~~~~-~~~--~~~~~~~~~~~~~~~   87 (268)
                      ....+.+..++.......+|.++++++.+ |....+.....+.+...+....  .+... ..+  .+.++.+..++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            56667777788888888999999987887 8899888888888877766554  22111 100  012335566666777


Q ss_pred             HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      ..+......+...+..++-..+++..+--+.+.+++.+++++++++.++.|+.+++.|..+-..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            7777777777788899999999999999999999999999999999999999999999887554

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.43  E-value=0.00033  Score=51.15  Aligned_cols=71  Identities=13%  Similarity=0.231  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      ......+++.++.+...+++++|.+.+-.+ .....+.+.+.+.++++|+++..+++++.+.++|+..+...
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            344666778899999999999999987766 46899999999999999999999999999999999887543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.37  E-value=0.054  Score=47.07  Aligned_cols=178  Identities=10%  Similarity=0.040  Sum_probs=110.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhheec---Ccc----hhhhhhheeehhe
Q 024405           76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYF---DWR----IWASLVPIVGGIL  147 (268)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pv~~~l~~~~~~~e~~---~~~----~~~~~~l~~~Gv~  147 (268)
                      .+.+...+..+++.+.++.....+.++.+++...-+. ..+-+...++..++++|-.   +..    -..++++.++|+.
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            4466667778889999999999999999988877554 4788889999999988744   322    3578888889999


Q ss_pred             eeec----ccc---------chhHHHHHHHHHHHHHHHHHH-------HHHHHHhccCCCChHHHHHHHhH---HHHHHH
Q 024405          148 LTSV----TEL---------SFNMFGFCAALFGCLATSTKT-------ILAESLLHSYKFDSINTVYYMAP---FATMIL  204 (268)
Q Consensus       148 l~~~----~~~---------~~~~~G~~~~l~s~~~~a~~~-------i~~k~~~~~~~~~~~~~~~~~~~---~~~~~l  204 (268)
                      +.+.    .|.         .....|++.++.|.+.++.|.       ...+...+ .+.++.....-+..   .+..+.
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHH
Confidence            8876    332         123689999999999999999       43333211 23455443332222   333322


Q ss_pred             H-HHHHHh--ccccccccccC---CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024405          205 S-IPALLL--EGSGIMDWLST---HPSPWSAFIIIFSSGVLAFCLNFSIFYVIHST  254 (268)
Q Consensus       205 ~-~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  254 (268)
                      - ++....  ...+..+..+.   .+..........+.|+.=+..++.....-++.
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~  284 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKL  284 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            2 222211  11111111111   01113445666777777777777776666665

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.28  E-value=0.0047  Score=53.42  Aligned_cols=137  Identities=12%  Similarity=0.159  Sum_probs=89.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhh-hHHHHHHHHH
Q 024405           10 VFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDR-WRRIFPMSFV   88 (268)
Q Consensus        10 ~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   88 (268)
                      ...++....+|.+.+    ...|+.+++  .| +......=-+++.++..+.....++....+.++..+ .......++.
T Consensus       170 Dll~l~~a~lya~~n----V~~E~~v~~--~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~  242 (334)
T PF06027_consen  170 DLLALLGAILYAVSN----VLEEKLVKK--AP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC  242 (334)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHhccc--CC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence            344444444454444    445888774  45 444444444455555555444444444444433322 2222222333


Q ss_pred             HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc
Q 024405           89 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus        89 ~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      ......+....++..++....+-..++.++.++.+.+++++++++..++|.++++.|.++....+
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            34444556777888999888888899999999999999999999999999999999999987654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.28  E-value=0.00073  Score=48.67  Aligned_cols=71  Identities=18%  Similarity=0.329  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      .....+.+...+.+...++++.|.+.+-.+- ....+.+.+.++++++|++++.++.++.+.++|+..+...
T Consensus        33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3345666788888889999999999887774 4788999999999999999999999999999999987543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.24  E-value=0.0072  Score=50.43  Aligned_cols=132  Identities=12%  Similarity=0.130  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC-cccChhhhhHHHHHHHHHHHHHHHH
Q 024405           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPL-ITVEPEDRWRRIFPMSFVFCINIVL   95 (268)
Q Consensus        17 ~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   95 (268)
                      +.+..+.+.+.+...|..+.   .| +..-..+....-......+.......+. ........+..+...|...+....+
T Consensus       152 val~la~sf~~Ygl~RK~~~---v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~l  227 (293)
T COG2962         152 VALALALSFGLYGLLRKKLK---VD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLL  227 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcC---Cc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHH
Confidence            44555566666655555553   56 6776777777777776666655333221 1112344666677788888999999


Q ss_pred             hhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeecc
Q 024405           96 GNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT  152 (268)
Q Consensus        96 ~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  152 (268)
                      +..|-+.+|.+...++++..|....+++.++++|.++..+..+-+..-.|+++.+.+
T Consensus       228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998887777777766543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.21  E-value=0.0055  Score=50.04  Aligned_cols=126  Identities=9%  Similarity=0.055  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHH-HHHHHH
Q 024405           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVF-CINIVL   95 (268)
Q Consensus        17 ~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   95 (268)
                      .+.-..++.......|.+=+.  -+ .-.-...-+.++.++.+++....   .-+.+..++.....+..+++. ++.+.+
T Consensus       153 Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~---ag~~l~~p~ll~laLgvavlSSalPYsL  226 (292)
T COG5006         153 ALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQ---AGPALFSPSLLPLALGVAVLSSALPYSL  226 (292)
T ss_pred             HHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhh---cchhhcChHHHHHHHHHHHHhcccchHH
Confidence            334444555555444544431  22 22333455556666555544321   111222333444455566665 788899


Q ss_pred             hhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehhee
Q 024405           96 GNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (268)
Q Consensus        96 ~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  148 (268)
                      ...+++..|...+.++.+..|.+..+.+.++++|.+|..||.++..++++..=
T Consensus       227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999887776653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.20  E-value=0.0017  Score=55.58  Aligned_cols=63  Identities=17%  Similarity=0.261  Sum_probs=58.2

Q ss_pred             HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      .+..+..+...|+.+.|.+..+-+.+..-++.++++..++|||++++++.|..+++.|..++.
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            456777888999999999999999999999999999999999999999999999999998654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.19  E-value=0.0013  Score=46.91  Aligned_cols=70  Identities=13%  Similarity=0.105  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      .......+..++.+...+++..|.+.+-.+- ....+.+.+.+.+++||+.++.+++++.+.++|+.....
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            3345666788888999999999988765544 488999999999999999999999999999999987643

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.16  E-value=0.00095  Score=47.25  Aligned_cols=70  Identities=13%  Similarity=0.176  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHH-HHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFM-QTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      ....-.++..++.+...|+|++|.+.+ ++-.....+.+.+.++++++|+.+..+++++.+.++|+.....
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            444556678888899999999998875 4556688999999999999999999999999999999987654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.09  E-value=0.0018  Score=46.42  Aligned_cols=68  Identities=15%  Similarity=0.279  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhheecCcchhhhhhheeehheee
Q 024405           82 IFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (268)
Q Consensus        82 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  149 (268)
                      .......+...+.+...+++++|.+.+-.+ .....+.+.+.+.+++||++++.+++++.+.++|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444566678888899999999998876544 45888999999999999999999999999999999865

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.83  E-value=0.006  Score=42.58  Aligned_cols=57  Identities=7%  Similarity=0.177  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHH-HHHhHHHHHHHHHHHHHhheecCcchhhhhhh
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQ-TIKSFTPATTVVLQWLVWRKYFDWRIWASLVP  141 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l  141 (268)
                      ....+..+..+...++++.|.+.+- +......+.+.+.+..++||+.|..|+.++.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            4446788889999999999998874 45569999999999999999999999999865

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.80  E-value=0.027  Score=47.10  Aligned_cols=103  Identities=14%  Similarity=0.105  Sum_probs=71.6

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHH
Q 024405           39 DFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPAT  118 (268)
Q Consensus        39 ~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~  118 (268)
                      +.+ |+....=|..--.+...++..+.    +++...|+.++. ...++.++..+.++..|-+.+..+..-.+..+.++.
T Consensus       161 ~~~-~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvI  234 (269)
T PF06800_consen  161 HVS-GWSAFLPQAIGMLIGAFIFNLFS----KKPFFEKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVI  234 (269)
T ss_pred             CCC-hhHhHHHHHHHHHHHHHHHhhcc----cccccccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHH
Confidence            455 77777666443333333333322    222233445554 448899999999999999999999999999999999


Q ss_pred             HHHHHHHHhheecCcchh----hhhhheeehhe
Q 024405          119 TVVLQWLVWRKYFDWRIW----ASLVPIVGGIL  147 (268)
Q Consensus       119 ~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~  147 (268)
                      ..+.+.+++||+=++++.    +++++.++|.+
T Consensus       235 StlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  235 STLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            999999999998777765    34454545543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.67  E-value=0.066  Score=40.28  Aligned_cols=117  Identities=12%  Similarity=0.168  Sum_probs=83.2

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 024405           28 IITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSF  107 (268)
Q Consensus        28 ~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~  107 (268)
                      ..+|-.+-+.  .+.|+.-++.-+..+.+.+.++..+.+..+..+. ++.+|+.++ .|++..........+...++++.
T Consensus        17 ~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~-~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~   92 (138)
T PF04657_consen   17 AAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLASL-SSVPWWAYL-GGLLGVFFVLSNIILVPRLGAAL   92 (138)
T ss_pred             HHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHH
Confidence            3445555443  3349999999999999998887776554332222 222444333 78888888888999999998877


Q ss_pred             HHHHH-hHHHHHHHHHHHH----HhheecCcchhhhhhheeehhee
Q 024405          108 MQTIK-SFTPATTVVLQWL----VWRKYFDWRIWASLVPIVGGILL  148 (268)
Q Consensus       108 ~~~l~-~~~pv~~~l~~~~----~~~e~~~~~~~~~~~l~~~Gv~l  148 (268)
                      ...+. .-+-+...+++.+    .-|+++++++.+++.++++|+.+
T Consensus        93 ~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   93 TTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            76554 4667777777775    34678999999999999999863

>TIGR00803 nst UDP-galactose transporter

Probab=96.45  E-value=0.051  Score=44.29  Aligned_cols=64  Identities=5%  Similarity=0.014  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehhee
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  148 (268)
                      ..+..+....+..+.++|.+.....+...+.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus       158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            4455566777788899999999999999999999999999999999999999999999988764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=96.36  E-value=0.0088  Score=43.49  Aligned_cols=87  Identities=14%  Similarity=0.244  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHH-HHHHHHHH
Q 024405          169 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL-AFCLNFSI  247 (268)
Q Consensus       169 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  247 (268)
                      ++||.+.+..|+..++  .|+.+...+....+.+ +.+.....+..+..++      ++..+......+.+ ....+...
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNL------SPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCC------ChhhhhhhhHhhccceehHHHHH
Confidence            4688999999998886  8999999999999998 7776666654331111      12223444444545 45566667


Q ss_pred             HHHHhccCcchhhhccc
Q 024405          248 FYVIHSTTAVTFNVAGN  264 (268)
Q Consensus       248 ~~~i~~~sa~t~sv~~~  264 (268)
                      ++..++.++...+....
T Consensus        72 ~~a~~~~~~~~~~~~~~   88 (126)
T PF00892_consen   72 FYALKYISASIVSILQY   88 (126)
T ss_pred             HHHHHhcchhHHHHHHH
Confidence            88899999988877654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=96.14  E-value=0.13  Score=37.67  Aligned_cols=88  Identities=15%  Similarity=0.071  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHH
Q 024405          161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  240 (268)
Q Consensus       161 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
                      .++++++++++++..++.|--.++  .||...+..-.....+.+..+....+..+     ...+.++..|..+.++|+.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~-----~~~~~~~k~~lflilSGla~   77 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQ-----AGGEIGPKSWLFLILSGLAG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCcee-----cccccCcceehhhhHHHHHH
Confidence            578999999999999999987665  78877777777777777777776665332     22223444578889999887


Q ss_pred             HHHHHHHHHHHhccC
Q 024405          241 FCLNFSIFYVIHSTT  255 (268)
Q Consensus       241 ~~~~~~~~~~i~~~s  255 (268)
                      -..-+.+|..+|+-.
T Consensus        78 glswl~Yf~ALk~G~   92 (140)
T COG2510          78 GLSWLLYFRALKKGK   92 (140)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            777778888877544

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.09  E-value=0.15  Score=43.35  Aligned_cols=67  Identities=9%  Similarity=0.122  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeec
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV  151 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  151 (268)
                      .-+.+..+-..++.|+.+.|.+..+-+.+.+.+..++++..++|||.+....+|+.++++|-.++..
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            3344578888899999999999999999999999999999999999999999999999999987654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.94  E-value=0.012  Score=50.52  Aligned_cols=139  Identities=9%  Similarity=0.023  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHHHhhcCCC---cccChhhhhHHHHH
Q 024405           11 FRSLLAILQWWVFNVTVIITNKWIFQ--KLDFKFPLSVSCIHFICSSIGAY-LVIKVLKLKPL---ITVEPEDRWRRIFP   84 (268)
Q Consensus        11 ~~~~~~~~~~~~~s~~~~~~~K~~~~--~~~f~~p~~l~~~r~~~~~l~l~-~~~~~~~~~~~---~~~~~~~~~~~~~~   84 (268)
                      .......+.+.+....-+++.|.+++  +++.+ +..+...+--++...++ +.....+....   ...++.-.......
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            45556666777777777788888884  45688 88888888888887777 54433221111   11112222333333


Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      .+.+..+.+...+..+.++++=.+++.....-+.+...++++++|+.+..+..|..+.+.|+.+-+
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            445555556677777888888888888888888888888888888778888888888888877654

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.82  E-value=0.02  Score=41.27  Aligned_cols=71  Identities=23%  Similarity=0.313  Sum_probs=57.1

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhheecCcchhhhhhheeehheee
Q 024405           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (268)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  149 (268)
                      ++++..|. +++..+...+++.+...+.|.+.-+ .+++=++|++.++++.+|..+++.++|+.+++.|+.+.
T Consensus        41 n~~y~ipf-~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPF-LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHH-HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            44555544 3455666677788999999988877 58999999999998888888999999999999999864

Many members are annotated as potential transmembrane proteins.

>TIGR00688 rarD rarD protein

Probab=95.80  E-value=0.11  Score=43.37  Aligned_cols=99  Identities=6%  Similarity=0.081  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccc--cccccCCCCchHHHHHHHHH
Q 024405          159 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGI--MDWLSTHPSPWSAFIIIFSS  236 (268)
Q Consensus       159 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  236 (268)
                      .|..+.++++++|+...+..|. ..  +++|.++.++.+..+.+.+.+........+.  ..+....+  ...+......
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQK--RPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCccc--chHHHHHHHH
Confidence            4889999999999999999997 34  3899999999999998887776544432110  01111111  1124456667


Q ss_pred             HHHHHHHHHHHHHHHhccCcchhhhc
Q 024405          237 GVLAFCLNFSIFYVIHSTTAVTFNVA  262 (268)
Q Consensus       237 ~~~~~~~~~~~~~~i~~~sa~t~sv~  262 (268)
                      |++......+.++.++.+++.+.++.
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l  102 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLG  102 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHH
Confidence            77666666777888888887776654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.16  E-value=0.97  Score=37.50  Aligned_cols=131  Identities=12%  Similarity=0.041  Sum_probs=84.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-HhhcCCCcccChhhhhH-HHHHHH
Q 024405            9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIK-VLKLKPLITVEPEDRWR-RIFPMS   86 (268)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~   86 (268)
                      +......+++.-..+|......++.++++.+  -|....-.|.-...++...... ..+..+..+....+.+. .....-
T Consensus       111 ~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i  188 (244)
T PF04142_consen  111 NPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVI  188 (244)
T ss_pred             hhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHH
Confidence            3456677777777888888889999999655  3666666665555444443332 22211111111111111 122233


Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhh
Q 024405           87 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVP  141 (268)
Q Consensus        87 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l  141 (268)
                      +..+.+-.....-+||.+.=.=....+...+.+.+++..+++.+++....+|..+
T Consensus       189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            4455555566667899887788888899999999999999999999988877653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.77  E-value=0.53  Score=35.38  Aligned_cols=94  Identities=12%  Similarity=0.160  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHHHHH
Q 024405          161 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  240 (268)
Q Consensus       161 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
                      .++++.+..+-+++..++.++.++.+ ||+.....+...+.+.+.......++++..+.   .+.+   | ...++|+++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~---~~~p---~-w~~lGG~lG   74 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLASL---SSVP---W-WAYLGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccchh---ccCC---h-HHhccHHHH
Confidence            46788888999999999998877643 69999999999999999888888875422221   1222   2 234489999


Q ss_pred             HHHHHHHHHHHhccCcchhhhc
Q 024405          241 FCLNFSIFYVIHSTTAVTFNVA  262 (268)
Q Consensus       241 ~~~~~~~~~~i~~~sa~t~sv~  262 (268)
                      ...-.+....+++.++......
T Consensus        75 ~~~V~~~~~~vp~lG~~~~~~l   96 (138)
T PF04657_consen   75 VFFVLSNIILVPRLGAALTTIL   96 (138)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHH
Confidence            8888888888899988776543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.41  E-value=0.59  Score=39.53  Aligned_cols=138  Identities=17%  Similarity=0.163  Sum_probs=99.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCccc----ChhhhhHHHHH
Q 024405            9 SVFRSLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITV----EPEDRWRRIFP   84 (268)
Q Consensus         9 ~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~----~~~~~~~~~~~   84 (268)
                      +.......+..+..+=...+-..+.++++++.+ ++.+.+.-.++..+.-.......+.. .+.+    ..++-+++++.
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~-~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHL-LPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCC-chHHHHHHcChhHHHHHHH
Confidence            344555666666666666666677788877777 77766666665555554443322211 1110    13678899999


Q ss_pred             HHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehhee
Q 024405           85 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL  148 (268)
Q Consensus        85 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l  148 (268)
                      .+.+.+.+..+-++-++.-++=..+++.-+==.+..+++.+.++.+.++.|+.+..++++|..+
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            9999999998888888777666777777888899999999999999999999999988888764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=93.78  E-value=0.072  Score=44.09  Aligned_cols=74  Identities=11%  Similarity=0.081  Sum_probs=64.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheee
Q 024405           76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (268)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  149 (268)
                      .++|....-+|++..++..+...+++.=-++-.++.+.+..++..+-..+++++.|++..+.|.++++...+..
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            34666666689999999999999999999999999999999999999999999999999999988777665544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.61  E-value=0.03  Score=45.70  Aligned_cols=117  Identities=17%  Similarity=0.123  Sum_probs=91.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhheecCcchh----hhhhheeehheeee
Q 024405           76 EDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTS  150 (268)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pv~~~l~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~  150 (268)
                      ...+..-+..+++.+.+...++.|.++.++|.+.-+. .++-+-+-+++++.++|..+..+.    .++++.+.|+.+.+
T Consensus        56 ~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs  135 (288)
T COG4975          56 LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS  135 (288)
T ss_pred             hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence            4466777778889999999999999999988876544 478889999999999998877764    67788999999998


Q ss_pred             ccccc--------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHH
Q 024405          151 VTELS--------FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYM  196 (268)
Q Consensus       151 ~~~~~--------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~  196 (268)
                      .+|.+        ....|+...+.|.+.|..|.+..+..    +.|.++...-|
T Consensus       136 ~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPq  185 (288)
T COG4975         136 KQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQ  185 (288)
T ss_pred             eeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHH
Confidence            86631        12478898999999999998888764    34555544443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.68  E-value=3  Score=31.66  Aligned_cols=122  Identities=11%  Similarity=0.186  Sum_probs=76.1

Q ss_pred             HHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccChhhhhHHHHHHHHHHHHHHHHhhhhhcccch
Q 024405           26 TVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVEPEDRWRRIFPMSFVFCINIVLGNVSLRYIPV  105 (268)
Q Consensus        26 ~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  105 (268)
                      ...-+|-.+-+.  .+.|..-.+.-+..+..++..+...+++++.....++.+|+.+. .|.+.+............+.+
T Consensus        19 ~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~-GG~lGa~~vt~s~~l~p~lGa   95 (150)
T COG3238          19 LQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWI-GGLLGAIFVTSSILLAPRLGA   95 (150)
T ss_pred             hHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHH-ccchhhhhhhhhHHhccchhH
Confidence            333455555542  44599999999999999888777664433332222233444444 445555555555555566654


Q ss_pred             hH-HHHHHhHHHHHHHHHHHHHh----heecCcchhhhhhheeehheeee
Q 024405          106 SF-MQTIKSFTPATTVVLQWLVW----RKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus       106 ~~-~~~l~~~~pv~~~l~~~~~~----~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      +. .....+-+-+..++++.+=.    +++++..+..++++..+|+.+..
T Consensus        96 ~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          96 ATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            44 44556667777777775432    36789999999999999955543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.48  E-value=0.78  Score=39.04  Aligned_cols=137  Identities=9%  Similarity=-0.094  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCC-----CcccChhhhhHHHHHHHH
Q 024405           13 SLLAILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKP-----LITVEPEDRWRRIFPMSF   87 (268)
Q Consensus        13 ~~~~~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   87 (268)
                      ...++....++........|+-.+..+++ -+.+.+...+.....+.+...+.+..+     .........+-.+...++
T Consensus       158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  158 GYSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            45566666677777777777777754555 555666666666666655554444322     000111223344444444


Q ss_pred             HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeee
Q 024405           88 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS  150 (268)
Q Consensus        88 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  150 (268)
                      +..+-.++..++.+..|+...++.....-..+.+...++++++.++...+|+.+.+.|-++-.
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            446667788888888888888888877777777777777777788887777777776665543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.29  E-value=3.1  Score=36.35  Aligned_cols=68  Identities=9%  Similarity=0.091  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHH---HH-hHHHHHHHHHHHHHhheecC--cc----hhhhhhheeehheeeec
Q 024405           83 FPMSFVFCINIVLGNVSLRYIPVSFMQT---IK-SFTPATTVVLQWLVWRKYFD--WR----IWASLVPIVGGILLTSV  151 (268)
Q Consensus        83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pv~~~l~~~~~~~e~~~--~~----~~~~~~l~~~Gv~l~~~  151 (268)
                      ...++.....+.++..+-...+.....+   +. ++..++..+-+. ++||+=+  ++    .++++++.++|..++..
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            4566677777777777777765444433   55 555555555555 6888644  33    34666666666665543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=90.16  E-value=1.6  Score=38.15  Aligned_cols=141  Identities=11%  Similarity=0.080  Sum_probs=92.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCchHHHHHHHHHHHHHHHHHHHHHhh--cCCCcccChhhhhHHHH
Q 024405            8 WSVFRSLLAILQWWVFNVTVIITNKWIFQKL--DFKFPLSVSCIHFICSSIGAYLVIKVLK--LKPLITVEPEDRWRRIF   83 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~s~~~~~~~K~~~~~~--~f~~p~~l~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~   83 (268)
                      +....++.-.++|.+-.+    +-|.=..++  +.+-|.+..+...+ +.+.+++......  ..++.+.|...+...++
T Consensus       247 lG~llaL~sA~~YavY~v----llk~~~~~eg~rvdi~lffGfvGLf-nllllwP~l~iL~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  247 LGNLLALLSALLYAVYTV----LLKRKIGDEGERVDIQLFFGFVGLF-NLLLLWPPLIILDFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             HHHHHHHHHHHHHHHHHH----HHHhhcccccccccHHHHHHHHHHH-HHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence            344444444445544332    225544433  57767776665543 4444443222211  22333444444554444


Q ss_pred             HHHHHH-HHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc
Q 024405           84 PMSFVF-CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus        84 ~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      ..++.. ...=+++.+|.-.+++-.+++-.+.+....++...++.++.+++..++|...+++|.+.+...+
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            444444 6777889999999999999999999999999999999999999999999999999999887644

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=89.12  E-value=2.4  Score=34.45  Aligned_cols=122  Identities=6%  Similarity=-0.027  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCcccC---hhhhhHHHHHHHHHHHHHH
Q 024405           17 ILQWWVFNVTVIITNKWIFQKLDFKFPLSVSCIHFICSSIGAYLVIKVLKLKPLITVE---PEDRWRRIFPMSFVFCINI   93 (268)
Q Consensus        17 ~~~~~~~s~~~~~~~K~~~~~~~f~~p~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   93 (268)
                      +...+..+....+..|...+-.+|. -..-.++.-..+..+++.+..+.+.....+..   +.+.....+..|++-.+..
T Consensus       160 m~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS  238 (309)
T COG5070         160 MFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS  238 (309)
T ss_pred             EehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh
Confidence            3444555556666666666544555 66667777777777776665554433322111   1223334555566667777


Q ss_pred             HHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhh
Q 024405           94 VLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASL  139 (268)
Q Consensus        94 ~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~  139 (268)
                      +..-|.++-++...+++..+..-....+.+.++++|..++.++.++
T Consensus       239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~si  284 (309)
T COG5070         239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSI  284 (309)
T ss_pred             hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHH
Confidence            8888889999999999998888777777777777666665555444

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=87.63  E-value=7.3  Score=29.62  Aligned_cols=97  Identities=13%  Similarity=0.110  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhccccccccccCCCCchHHHHHHHHHH
Q 024405          158 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  237 (268)
Q Consensus       158 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (268)
                      +...+..+.+..+-..+.-.+.++.+..+ +|......+...|...+..+....+.....+  ...+.+   | .....|
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~p---w-W~~~GG   76 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAP---W-WAWIGG   76 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCc---h-HHHHcc
Confidence            45677888899999999999988877644 7888888888999988888877755432222  111222   2 334556


Q ss_pred             HHHHHHHHHHHHHHhccCcchhhh
Q 024405          238 VLAFCLNFSIFYVIHSTTAVTFNV  261 (268)
Q Consensus       238 ~~~~~~~~~~~~~i~~~sa~t~sv  261 (268)
                      +++..+-++.....++.++.+...
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~  100 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIA  100 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHH
Confidence            888888777788888888876654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.60  E-value=0.58  Score=38.13  Aligned_cols=73  Identities=8%  Similarity=0.114  Sum_probs=58.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhhhhhheeehheee
Q 024405           77 DRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT  149 (268)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  149 (268)
                      ..+..+...++..+++..+.+.-..+-++=.-+++..+--.|+.+.+.++++...+.+||++.++++.|...-
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            4566677777877888877777777766666666667778899999999999999999999999988887653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=80.05  E-value=0.58  Score=38.41  Aligned_cols=70  Identities=9%  Similarity=0.020  Sum_probs=52.4

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhheecCcchhh----hhhheeehhe
Q 024405           78 RWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWA----SLVPIVGGIL  147 (268)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pv~~~l~~~~~~~e~~~~~~~~----~~~l~~~Gv~  147 (268)
                      +-..-...++.++.++.+...|-+....+..-.+..+..+...+-+.+++|||=+++++.    ++++.++|..
T Consensus       208 ~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai  281 (288)
T COG4975         208 YTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAI  281 (288)
T ss_pred             HHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhh
Confidence            333444578888888888888888888888878888888888888889999988888754    3344444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.34
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.22

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.34  E-value=6.3e-07  Score=63.84  Aligned_cols=71  Identities=18%  Similarity=0.360  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc
Q 024405           83 FPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus        83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      ....+.+.+.+.+...++++.|.+.+..+ ....|+++.+.+.+++||++++.+++++.++++|+.+....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44555678889999999999999999888 899999999999999999999999999999999999876544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.22  E-value=6.4e-07  Score=66.15  Aligned_cols=71  Identities=18%  Similarity=0.360  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhheecCcchhhhhhheeehheeeeccc
Q 024405           83 FPMSFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE  153 (268)
Q Consensus        83 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pv~~~l~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~  153 (268)
                      ....+.+.+.+.+.+.++++.+++.+..+ .+..|+++.++++++++|++++.+++|+.++++|+.+....+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44555678899999999999999988888 899999999999999999999999999999999999886543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00