Citrus Sinensis ID: 024439

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
Protein Sequence
MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEEEEEEccccccccccccccccEEcccccccEEEccccEEEEccHHHHHHHHHHHHHccHHHcccccccccccEEEEEEEEEEEEEcccccccccccccccccccccccccEEEEcEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccccHHHEEEEEccccccHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEEEEEEEcHHHHHHccccccccEEEEccccccEEEccccHHHEccHHHHHHHHHHcccccEEEEEccccccccccEEEEEEEEEEEEccccccccHHHHHccccccccccccEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcHHHHHccc
Coil and Loop (DISEMBL)
maygqtgtgktytlgrlgkddaserGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDllapekvnipinedpktgevslpgatvvKLRDLDHLLQLLQVGEVnrhaantklntessrsHAILVVYIRRSVHEIIDKITSeekdtrtelpgdnhvplvrkSKLLIVDLAgseridksgsegplleeAKFINLSLSSLGKCINAlaensphiptrdskLTRLLRdsfggsartsliitvgpsarnhaettstimfgqrgsirisvv
Flexible Loop (DISEMBL)
maygqtgtgktytlgrlgkddaseRGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPinedpktgevslPGATVVKLRDLDHLLQLLQVGEVNRHAantklntessrshaILVVYIRRSVHEIIDKitseekdtrtelpgdnhvplvrkSKLLIVDLAGseridksgsegplLEEAKFINLSLSSLGKCINALAensphiptrdskLTRLLRDSFggsartsliitvgpsarnhaettstimfgqrgsirisvv
Low Complexity Region (SEG)
MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKlrdldhllqllqVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV
Disordered region (IsUnstruct)
*************************GIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPIN*****GEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK*******SHAILVVYIRRSVHEIIDKIT***************VPLVRKSKLLIVDLA**************LEEAKFINLSLSSLGKCINALA***************LLR**FGGSARTSLIITVG**************************
Disordered Region (DISOPRED)
MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVH**********************VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV
Disordered Region (DISEMBL)
MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV
Disordered Region (DISPRO)
M****TGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAG*****************KFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIR*S**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	267	2.2.26 [Sep-21-2011]
Q9SV36	1051	Armadillo repeat-containi	no	no	0.973	0.247	0.752	1e-115
Q0DV28	945	Armadillo repeat-containi	yes	no	0.943	0.266	0.733	1e-109
Q9FZ06	919	Armadillo repeat-containi	no	no	0.943	0.274	0.672	1e-98
Q5VQ09	891	Armadillo repeat-containi	yes	no	0.970	0.290	0.680	9e-98
Q9LPC6	894	Armadillo repeat-containi	no	no	0.947	0.282	0.667	4e-97
O43093	935	Kinesin heavy chain OS=Sy	N/A	no	0.891	0.254	0.433	6e-49
P48467	928	Kinesin heavy chain OS=Ne	N/A	no	0.891	0.256	0.418	2e-48
Q86Z98	931	Kinesin heavy chain OS=Gi	N/A	no	0.891	0.255	0.422	3e-48
P33176	963	Kinesin-1 heavy chain OS=	yes	no	0.883	0.245	0.403	7e-47
Q2PQA9	963	Kinesin-1 heavy chain OS=	yes	no	0.883	0.245	0.403	1e-46

>sp|Q9SV36|ARK1_ARATH Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2

 Score =  414 bits (1063), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 7/267 (2%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G++GKDDA+ERGIMVRALEDI+ + S  S SVE+SYLQLYME+IQD
Sbjct: 186 MAYGQTGTGKTYTVGKIGKDDAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQD 245

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NI INED KTGEVS+PGATVV ++DLDH LQ+LQVGE NRHAANTK+NTESSR
Sbjct: 246 LLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSR 305

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSG 180
           SHAIL VY+RR+++E  +K        + E  GD  +P VRKSKLLIVDLAGSERI+KSG
Sbjct: 306 SHAILTVYVRRAMNEKTEK-------AKPESLGDKAIPRVRKSKLLIVDLAGSERINKSG 358

Query: 181 SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV 240
           ++G ++EEAKFINLSL+SLGKCINALAE S HIPTRDSKLTRLLRDSFGGSARTSLIIT+
Sbjct: 359 TDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITI 418

Query: 241 GPSARNHAETTSTIMFGQRGSIRISVV 267
           GPSAR HAETTSTIMFGQR    +++V
Sbjct: 419 GPSARYHAETTSTIMFGQRAMKIVNMV 445

Involved in the control of root hair tip growth by promoting microtubule depolymerization and limiting the accumulation of endoplasmic microtubules. In vitro, binds to polymerized actin through ARM repeats, and to polymerized tubulin through N-terminal motor domain.
Arabidopsis thaliana (taxid: 3702)

>sp|Q0DV28|ARK1_ORYSJ Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/266 (73%), Positives = 229/266 (86%), Gaps = 14/266 (5%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+GRLG DD SE GIMVRALE I+S MS+ +DSV +S+LQLY+ES+QD
Sbjct: 139 MAYGQTGTGKTYTVGRLGNDDPSEGGIMVRALEHILSVMSLETDSVAISFLQLYLESVQD 198

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NIPI EDPKTGEVSLPGA  V++RDL+H+ QLLQ+GE+NRHAANTK+NTESSR
Sbjct: 199 LLAPEKTNIPIVEDPKTGEVSLPGAAKVEIRDLEHVFQLLQIGEMNRHAANTKMNTESSR 258

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPG--DN----HVPLVRKSKLLIVDLAGSE 174
           SHAIL+++I+RS        +  E  + T LP   DN    ++PLV KSKLLIVDLAGSE
Sbjct: 259 SHAILIIHIQRS--------SRIEDGSNTSLPNGTDNLFPDNLPLVLKSKLLIVDLAGSE 310

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
           RIDKSGSEG ++EEAKFINLSL+SLGKCINALAENSPHIPTRDSKLTR+LRDSFGG+ART
Sbjct: 311 RIDKSGSEGHMIEEAKFINLSLTSLGKCINALAENSPHIPTRDSKLTRILRDSFGGTART 370

Query: 235 SLIITVGPSARNHAETTSTIMFGQRG 260
           SLI+T+GPS+R+ +ET+STIMFGQR 
Sbjct: 371 SLIVTIGPSSRHFSETSSTIMFGQRA 396

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FZ06|ARK3_ARATH Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1

 Score =  359 bits (921), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 179/266 (67%), Positives = 219/266 (82%), Gaps = 14/266 (5%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYTLG+LG++D ++RGIMVRA+EDI++ +S+ +DS+ VSYLQLYME++QD
Sbjct: 152 MAYGQTGTGKTYTLGQLGEEDVADRGIMVRAMEDILAEVSLETDSISVSYLQLYMETVQD 211

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LL P   NI I EDPK G+VSLPGAT+V++RD    L+LLQ+GE +R AANTKLNTESSR
Sbjct: 212 LLDPSNDNIAIVEDPKNGDVSLPGATLVEIRDQQSFLELLQLGEAHRFAANTKLNTESSR 271

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHV------PLVRKSKLLIVDLAGSE 174
           SHAIL+V +RRS+ +  D ++SE         G++H+      P+VRK KL++VDLAGSE
Sbjct: 272 SHAILMVNVRRSM-KTRDGLSSESN-------GNSHMTKSLKPPVVRKGKLVVVDLAGSE 323

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
           RI+KSGSEG  LEEAK INLSLS+LGKCINALAENS H+P RDSKLTRLLRDSFGG+ART
Sbjct: 324 RINKSGSEGHTLEEAKSINLSLSALGKCINALAENSSHVPFRDSKLTRLLRDSFGGTART 383

Query: 235 SLIITVGPSARNHAETTSTIMFGQRG 260
           SL+IT+GPS R+  ETTSTIMFGQR 
Sbjct: 384 SLVITIGPSPRHRGETTSTIMFGQRA 409

Arabidopsis thaliana (taxid: 3702)

>sp|Q5VQ09|ARK2_ORYSJ Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1

 Score =  356 bits (914), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 216/263 (82%), Gaps = 4/263 (1%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKT+TLGRLG++D + RGIMVRA+EDI++ ++  +D+V VSYLQLYME IQD
Sbjct: 136 MAYGQTGTGKTFTLGRLGEEDTAARGIMVRAMEDILADITPETDTVSVSYLQLYMEMIQD 195

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LL P   NI I EDP+TG+VSLPGATVV++RD    + LL++GE +R AANTKLNTESSR
Sbjct: 196 LLDPVNDNIAIVEDPRTGDVSLPGATVVEVRDQKSFVDLLRIGEAHRVAANTKLNTESSR 255

Query: 121 SHAILVVYIRRSV---HEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SHA+L+V +RR+V   HE +D   S E    + + G    P+VRKSKL++VDLAGSERID
Sbjct: 256 SHALLMVNVRRAVKGKHE-MDVSISGENGHSSSMVGSLRPPIVRKSKLVVVDLAGSERID 314

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLI 237
           KSGSEG  LEEAK INLSLS+LGKCINALAENSPH+P RDSKLTRLL+DSFGG+ARTSL+
Sbjct: 315 KSGSEGHTLEEAKSINLSLSALGKCINALAENSPHVPVRDSKLTRLLKDSFGGTARTSLV 374

Query: 238 ITVGPSARNHAETTSTIMFGQRG 260
           +T+GPS R+  ETTSTIMFGQR 
Sbjct: 375 VTIGPSPRHRGETTSTIMFGQRA 397

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LPC6|ARK2_ARATH Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2

 Score =  354 bits (908), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 177/265 (66%), Positives = 214/265 (80%), Gaps = 12/265 (4%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKT+TLGRLG +D + RGIMVR++EDII   S+ +DS+ VSYLQLYME+IQD
Sbjct: 142 MAYGQTGTGKTFTLGRLGDEDTAARGIMVRSMEDIIGGTSLDTDSISVSYLQLYMETIQD 201

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LL P   NI I EDP+TG+VSLPGAT V++R+  + L+LLQ+GE +R AANTKLNTESSR
Sbjct: 202 LLDPTNDNIAIVEDPRTGDVSLPGATHVEIRNQQNFLELLQLGETHRVAANTKLNTESSR 261

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHV-----PLVRKSKLLIVDLAGSER 175
           SHAIL+V+++RSV E        E     E+   +H      PLVR+SKL++VDLAGSER
Sbjct: 262 SHAILMVHVKRSVVE-------NEFPVSNEMESSSHFVRPSKPLVRRSKLVLVDLAGSER 314

Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + KSGSEG +LEEAK INLSLS+LGKCINA+AENSPH+P RDSKLTRLLRDSFGG+ARTS
Sbjct: 315 VHKSGSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDSKLTRLLRDSFGGTARTS 374

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           LI+T+GPS R+  ETTSTI+FGQR 
Sbjct: 375 LIVTIGPSPRHRGETTSTILFGQRA 399

Involved in the control of epidermal-cell morphogenesis in roots and helical growth of roots by promoting microtubule depolymerization and limiting the accumulation of endoplasmic microtubules. Seems to be involved in the control of cell-file rotation (or twisting).

Arabidopsis thaliana (taxid: 3702)

>sp|O43093|KINH_SYNRA Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1

 Score =  194 bits (493), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 161/265 (60%), Gaps = 27/265 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYME 56
            AYGQTG+GKT+T+     DD   +GI+ R +E I  S+  +  ++E    VSY+++YME
Sbjct: 84  FAYGQTGSGKTFTMMGADIDDEKTKGIIPRIVEQIFDSIMASPSNLEFTVKVSYMEIYME 143

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            ++DLL P   N+PI+ED KT  V + G   V +   D + ++++ G  NR  A T +N 
Sbjct: 144 KVRDLLNPSSENLPIHED-KTKGVYVKGLLEVYVGSTDEVYEVMRRGSNNRVVAYTNMNA 202

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I++  I           T +  DT     G          KL +VDLAGSE++
Sbjct: 203 ESSRSHSIVMFTI-----------TQKNVDTGAAKSG----------KLYLVDLAGSEKV 241

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  LEEAK IN SL++LG  INAL +  S H+P RDSKLTR+L++S GG++RT+
Sbjct: 242 GKTGASGQTLEEAKKINKSLTALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT 301

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           LII   PS+ N AET ST+ FG R 
Sbjct: 302 LIINCSPSSYNEAETLSTLRFGARA 326

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Its motor activity is directed toward the microtubule's plus end. The speed of this motor is 4-5 times faster than its animal counterparts.

Syncephalastrum racemosum (taxid: 13706)

>sp|P48467|KINH_NEUCR Kinesin heavy chain OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=kin PE=1 SV=2

 Score =  192 bits (488), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 163/265 (61%), Gaps = 27/265 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYME 56
            AYGQTG GK+YT+     DD   RG++ R +E I +S+  ++ ++E    VSY+++YME
Sbjct: 85  FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYME 144

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLLAP+  N+P++E+   G V + G   + +  +  + ++++ G   R  A T +N 
Sbjct: 145 RIRDLLAPQNDNLPVHEEKNRG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQ 203

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I V+ I           T +  +T +   G          +L +VDLAGSE++
Sbjct: 204 ESSRSHSIFVITI-----------TQKNVETGSAKSG----------QLFLVDLAGSEKV 242

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  LEEAK IN SLS+LG  INAL +  S H+P RDSKLTR+L++S GG++RT+
Sbjct: 243 GKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT 302

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           LII   PS+ N AET ST+ FG R 
Sbjct: 303 LIINCSPSSYNDAETLSTLRFGMRA 327

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Its motor activity is directed toward the microtubule's plus end.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q86Z98|KINH_GIBMO Kinesin heavy chain OS=Gibberella moniliformis GN=KLP1 PE=3 SV=1

 Score =  191 bits (486), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/265 (42%), Positives = 161/265 (60%), Gaps = 27/265 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYME 56
            AYGQTG GK+YT+     DD   RGI+ R +E I +S+  +  ++E    VSY+++YME
Sbjct: 84  FAYGQTGAGKSYTMMGTNIDDDEGRGIIPRIVEQIFASIMSSPGTIEYTVRVSYMEIYME 143

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLLAP+  N+P++E+   G V + G   + +  +  + ++++ G   R  A T +N 
Sbjct: 144 RIRDLLAPQNDNLPVHEEKNRG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQ 202

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I V+ I           T +  +T +   G          +L +VDLAGSE++
Sbjct: 203 ESSRSHSIFVITI-----------TQKNVETGSAKSG----------QLFLVDLAGSEKV 241

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  LEEAK IN SLS+LG  INAL +  S HIP RDSKLTR+L++S GG++RT+
Sbjct: 242 GKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHIPYRDSKLTRILQESLGGNSRTT 301

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           LII   PS+ N AET  T+ FG R 
Sbjct: 302 LIINCSPSSYNDAETLGTLRFGMRA 326

Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Its motor activity is directed toward the microtubule's plus end.

Gibberella moniliformis (taxid: 117187)

>sp|P33176|KINH_HUMAN Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1

 Score =  187 bits (475), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 163/265 (61%), Gaps = 29/265 (10%)

Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GKT+T+ G+L   D    GI+ R ++DI + +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKTHTMEGKLH--DPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 139

Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T   +   D ++  +  G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLSVHED-KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 198

Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++           E   T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINVKQ-----------ENTQTEQKLSG----------KLYLVDLAGSEK 237

Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 297

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++I   PS+ N +ET ST++FGQR 
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRA 322

Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes.

Homo sapiens (taxid: 9606)

>sp|Q2PQA9|KINH_RAT Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1

 Score =  186 bits (473), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 163/265 (61%), Gaps = 29/265 (10%)

Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GKT+T+ G+L   D    GI+ R ++DI + +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKTHTMEGKLH--DPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 139

Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T   +   D ++  +  G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLSVHED-KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 198

Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++           E   T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINVKQ-----------ENTQTEQKLSG----------KLYLVDLAGSEK 237

Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 297

Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++I   PS+ N +ET ST++FGQR 
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRA 322

Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
359486877	1017	PREDICTED: armadillo repeat-containing k	1.0	0.262	0.817	1e-127
296085981	1331	unnamed protein product [Vitis vinifera]	1.0	0.200	0.817	1e-126
255577444	1051	Kinesin-II 85 kDa subunit, putative [Ric	0.992	0.252	0.783	1e-121
224109820	1067	predicted protein [Populus trichocarpa]	1.0	0.250	0.791	1e-121
449444628	1061	PREDICTED: armadillo repeat-containing k	0.973	0.245	0.790	1e-118
30694137	941	armadillo repeat-containing kinesin-like	0.973	0.276	0.752	1e-113
193806750	1051	RecName: Full=Armadillo repeat-containin	0.973	0.247	0.752	1e-113
5541717	1070	kinesin-like protein [Arabidopsis thalia	0.973	0.242	0.752	1e-113
297816786	1051	morphogenesis of root hair 2 [Arabidopsi	0.973	0.247	0.752	1e-113
357120714	946	PREDICTED: armadillo repeat-containing k	0.962	0.271	0.747	1e-111

>gi|359486877|ref|XP_002273191.2| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like [Vitis vinifera]

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 248/268 (92%), Gaps = 1/268 (0%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYTLGRLG DDASERGIMVRALEDII++ S TSDSVE+SY+QLYMESIQD
Sbjct: 140 MAYGQTGTGKTYTLGRLGNDDASERGIMVRALEDIIANTSPTSDSVEISYVQLYMESIQD 199

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK+NIPI EDP+TGEVSLPGA VVK+RD+DH LQ LQ+GE NRHAANTKLNTESSR
Sbjct: 200 LLAPEKINIPITEDPRTGEVSLPGAAVVKIRDIDHFLQQLQIGEANRHAANTKLNTESSR 259

Query: 121 SHAILVVYIRRSVHEII-DKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           SHAIL+VY+RRSVH+ + D+I+S+EK  R+++PG + +P+VRKSKLLIVDLAGSER+DKS
Sbjct: 260 SHAILMVYVRRSVHKKVEDEISSQEKVNRSDVPGGSRIPIVRKSKLLIVDLAGSERVDKS 319

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           GSEG LLEEAKFINLSL+SLGKCINALAENSPHIP RDSKLTRLLRDSFGGSARTSLIIT
Sbjct: 320 GSEGQLLEEAKFINLSLTSLGKCINALAENSPHIPIRDSKLTRLLRDSFGGSARTSLIIT 379

Query: 240 VGPSARNHAETTSTIMFGQRGSIRISVV 267
           +GPSAR+HAETTSTIMFGQR    +++V
Sbjct: 380 IGPSARHHAETTSTIMFGQRAMKIVNMV 407

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085981|emb|CBI31422.3| unnamed protein product [Vitis vinifera]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 248/268 (92%), Gaps = 1/268 (0%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYTLGRLG DDASERGIMVRALEDII++ S TSDSVE+SY+QLYMESIQD
Sbjct: 111 MAYGQTGTGKTYTLGRLGNDDASERGIMVRALEDIIANTSPTSDSVEISYVQLYMESIQD 170

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK+NIPI EDP+TGEVSLPGA VVK+RD+DH LQ LQ+GE NRHAANTKLNTESSR
Sbjct: 171 LLAPEKINIPITEDPRTGEVSLPGAAVVKIRDIDHFLQQLQIGEANRHAANTKLNTESSR 230

Query: 121 SHAILVVYIRRSVHEII-DKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           SHAIL+VY+RRSVH+ + D+I+S+EK  R+++PG + +P+VRKSKLLIVDLAGSER+DKS
Sbjct: 231 SHAILMVYVRRSVHKKVEDEISSQEKVNRSDVPGGSRIPIVRKSKLLIVDLAGSERVDKS 290

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           GSEG LLEEAKFINLSL+SLGKCINALAENSPHIP RDSKLTRLLRDSFGGSARTSLIIT
Sbjct: 291 GSEGQLLEEAKFINLSLTSLGKCINALAENSPHIPIRDSKLTRLLRDSFGGSARTSLIIT 350

Query: 240 VGPSARNHAETTSTIMFGQRGSIRISVV 267
           +GPSAR+HAETTSTIMFGQR    +++V
Sbjct: 351 IGPSARHHAETTSTIMFGQRAMKIVNMV 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577444|ref|XP_002529601.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis] gi|223530934|gb|EEF32793.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/268 (78%), Positives = 247/268 (92%), Gaps = 3/268 (1%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+GRLGK+DASERGI+VRALED+I++ S  +D VE+SYLQLYMESIQD
Sbjct: 153 MAYGQTGTGKTYTVGRLGKNDASERGIVVRALEDVIANTSPDTDVVEMSYLQLYMESIQD 212

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK+NIPINEDP+TGEVSLPGAT+V++RDLD+L +LLQ+GE+NRHAANTK NTESSR
Sbjct: 213 LLAPEKINIPINEDPRTGEVSLPGATIVRVRDLDNLFELLQIGEMNRHAANTKQNTESSR 272

Query: 121 SHAILVVYIRRSVHEII-DKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           SHAIL+VY+RRS+H+ + D+ TS+  D++++LP  N +P VRK KLLIVDLAGSER+DKS
Sbjct: 273 SHAILMVYVRRSIHQKLEDETTSQ--DSKSDLPSSNGIPRVRKGKLLIVDLAGSERLDKS 330

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           GSEG LLEEAKFINLSL+SLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT
Sbjct: 331 GSEGHLLEEAKFINLSLTSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 390

Query: 240 VGPSARNHAETTSTIMFGQRGSIRISVV 267
           +GPS+R+HAETTSTIMFGQR    +++V
Sbjct: 391 IGPSSRHHAETTSTIMFGQRAMKIVNMV 418

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109820|ref|XP_002315323.1| predicted protein [Populus trichocarpa] gi|222864363|gb|EEF01494.1| predicted protein [Populus trichocarpa]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/268 (79%), Positives = 242/268 (90%), Gaps = 1/268 (0%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G+LGKDDASERGIMVRALEDI++S +  SD VEVSYLQLYMESIQD
Sbjct: 186 MAYGQTGTGKTYTVGKLGKDDASERGIMVRALEDILASTTRGSDIVEVSYLQLYMESIQD 245

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK+NIPINED +TGE+SLPGA+VVK+ DLDH  +LLQ+GE NRHAANTK NTESSR
Sbjct: 246 LLAPEKINIPINEDARTGEISLPGASVVKVEDLDHFSELLQIGEANRHAANTKQNTESSR 305

Query: 121 SHAILVVYIRRSVHEII-DKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           SHAIL+VY+RRS+++   D+ TS+EKD ++ L G N +P VRKSKLLIVDLAGSER+DKS
Sbjct: 306 SHAILMVYVRRSINQKAEDETTSQEKDVKSNLSGGNGIPRVRKSKLLIVDLAGSERLDKS 365

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           GSEG LLEEAKFINLSL+SLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT
Sbjct: 366 GSEGHLLEEAKFINLSLTSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 425

Query: 240 VGPSARNHAETTSTIMFGQRGSIRISVV 267
           +GPS ++HAETTSTIMFGQR    +++V
Sbjct: 426 IGPSGQHHAETTSTIMFGQRAMKIVNMV 453

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444628|ref|XP_004140076.1| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like [Cucumis sativus] gi|449490427|ref|XP_004158602.1| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like [Cucumis sativus]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/263 (79%), Positives = 237/263 (90%), Gaps = 3/263 (1%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYTLGR+GK+DASERGIMVRALEDII+++S TSDSVE+SYLQLYMESIQD
Sbjct: 175 MAYGQTGTGKTYTLGRMGKEDASERGIMVRALEDIIANVSPTSDSVEISYLQLYMESIQD 234

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEKVNIPINEDPKTGEVS PGATVVK++D+DH L LL++ E NRHAANTKLNTESSR
Sbjct: 235 LLAPEKVNIPINEDPKTGEVSAPGATVVKIQDIDHFLHLLEISESNRHAANTKLNTESSR 294

Query: 121 SHAILVVYIRRSVHEIIDKITSEE---KDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SHAIL+VY+RR+V +  + +T+ +    D   ++ G N +P++RKSKLL+VDLAGSERI+
Sbjct: 295 SHAILMVYVRRAVSKRNEDMTASQGNANDHAIDILGGNGIPMIRKSKLLVVDLAGSERIN 354

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLI 237
           KSGSEG LLEEAKFINLSL+SLGKCINALAENS HIPTRDSKLTRLLRDSFGGSARTSLI
Sbjct: 355 KSGSEGHLLEEAKFINLSLTSLGKCINALAENSTHIPTRDSKLTRLLRDSFGGSARTSLI 414

Query: 238 ITVGPSARNHAETTSTIMFGQRG 260
           IT+GPS+R HAET STIMFGQR 
Sbjct: 415 ITIGPSSRYHAETASTIMFGQRA 437

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30694137|ref|NP_191047.3| armadillo repeat-containing kinesin-like protein 1 [Arabidopsis thaliana] gi|332645782|gb|AEE79303.1| armadillo repeat-containing kinesin-like protein 1 [Arabidopsis thaliana]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 7/267 (2%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G++GKDDA+ERGIMVRALEDI+ + S  S SVE+SYLQLYME+IQD
Sbjct: 186 MAYGQTGTGKTYTVGKIGKDDAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQD 245

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NI INED KTGEVS+PGATVV ++DLDH LQ+LQVGE NRHAANTK+NTESSR
Sbjct: 246 LLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSR 305

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSG 180
           SHAIL VY+RR+++E  +K        + E  GD  +P VRKSKLLIVDLAGSERI+KSG
Sbjct: 306 SHAILTVYVRRAMNEKTEK-------AKPESLGDKAIPRVRKSKLLIVDLAGSERINKSG 358

Query: 181 SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV 240
           ++G ++EEAKFINLSL+SLGKCINALAE S HIPTRDSKLTRLLRDSFGGSARTSLIIT+
Sbjct: 359 TDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITI 418

Query: 241 GPSARNHAETTSTIMFGQRGSIRISVV 267
           GPSAR HAETTSTIMFGQR    +++V
Sbjct: 419 GPSARYHAETTSTIMFGQRAMKIVNMV 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193806750|sp|Q9SV36.2|ARK1_ARATH RecName: Full=Armadillo repeat-containing kinesin-like protein 1; AltName: Full=Protein MORPHOGENESIS OF ROOT HAIR 2 gi|161138211|gb|ABX58060.1| morphogenesis of root hair 2 [Arabidopsis thaliana] gi|162958323|dbj|BAF95585.1| armadillo repeat kinesin1 [Arabidopsis thaliana]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 7/267 (2%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G++GKDDA+ERGIMVRALEDI+ + S  S SVE+SYLQLYME+IQD
Sbjct: 186 MAYGQTGTGKTYTVGKIGKDDAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQD 245

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NI INED KTGEVS+PGATVV ++DLDH LQ+LQVGE NRHAANTK+NTESSR
Sbjct: 246 LLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSR 305

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSG 180
           SHAIL VY+RR+++E  +K        + E  GD  +P VRKSKLLIVDLAGSERI+KSG
Sbjct: 306 SHAILTVYVRRAMNEKTEK-------AKPESLGDKAIPRVRKSKLLIVDLAGSERINKSG 358

Query: 181 SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV 240
           ++G ++EEAKFINLSL+SLGKCINALAE S HIPTRDSKLTRLLRDSFGGSARTSLIIT+
Sbjct: 359 TDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITI 418

Query: 241 GPSARNHAETTSTIMFGQRGSIRISVV 267
           GPSAR HAETTSTIMFGQR    +++V
Sbjct: 419 GPSARYHAETTSTIMFGQRAMKIVNMV 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5541717|emb|CAB41097.2| kinesin-like protein [Arabidopsis thaliana]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 7/267 (2%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G++GKDDA+ERGIMVRALEDI+ + S  S SVE+SYLQLYME+IQD
Sbjct: 205 MAYGQTGTGKTYTVGKIGKDDAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQD 264

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NI INED KTGEVS+PGATVV ++DLDH LQ+LQVGE NRHAANTK+NTESSR
Sbjct: 265 LLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSR 324

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSG 180
           SHAIL VY+RR+++E  +K        + E  GD  +P VRKSKLLIVDLAGSERI+KSG
Sbjct: 325 SHAILTVYVRRAMNEKTEK-------AKPESLGDKAIPRVRKSKLLIVDLAGSERINKSG 377

Query: 181 SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV 240
           ++G ++EEAKFINLSL+SLGKCINALAE S HIPTRDSKLTRLLRDSFGGSARTSLIIT+
Sbjct: 378 TDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITI 437

Query: 241 GPSARNHAETTSTIMFGQRGSIRISVV 267
           GPSAR HAETTSTIMFGQR    +++V
Sbjct: 438 GPSARYHAETTSTIMFGQRAMKIVNMV 464

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816786|ref|XP_002876276.1| morphogenesis of root hair 2 [Arabidopsis lyrata subsp. lyrata] gi|297322114|gb|EFH52535.1| morphogenesis of root hair 2 [Arabidopsis lyrata subsp. lyrata]

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/267 (75%), Positives = 231/267 (86%), Gaps = 7/267 (2%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+G++GKDDA+ERGIMVRALEDI+ + S  S SVE+SYLQLYME+IQD
Sbjct: 186 MAYGQTGTGKTYTVGKIGKDDAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQD 245

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NI INED KTGEVS+PGATVV ++DLDH LQ+LQVGE NRHAANTK+NTESSR
Sbjct: 246 LLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSR 305

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSG 180
           SHAIL VY+RR+++E  +K        + E  GD  +P VRKSKLLIVDLAGSERI+KSG
Sbjct: 306 SHAILTVYVRRAMNEKSEK-------AKPESLGDKAIPRVRKSKLLIVDLAGSERINKSG 358

Query: 181 SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV 240
           ++G ++EEAKFINLSL+SLGKCINALAE S HIPTRDSKLTRLLRDSFGGSARTSLIIT+
Sbjct: 359 TDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITI 418

Query: 241 GPSARNHAETTSTIMFGQRGSIRISVV 267
           GPSAR HAETTSTIMFGQR    +++V
Sbjct: 419 GPSARYHAETTSTIMFGQRAMKIVNMV 445

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357120714|ref|XP_003562070.1| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like [Brachypodium distachyon]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/261 (74%), Positives = 236/261 (90%), Gaps = 4/261 (1%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
           MAYGQTGTGKTYT+GRLGK+D SERGIMVR+ E I+SSMS+ +DSV VSYLQLY+ES+QD
Sbjct: 140 MAYGQTGTGKTYTVGRLGKEDPSERGIMVRSFEHILSSMSLETDSVAVSYLQLYLESVQD 199

Query: 61  LLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSR 120
           LLAPEK NIPI EDPKTGEVSLPGA +V+++DL+H+ QLLQ+GE NRHAANTK+NTESSR
Sbjct: 200 LLAPEKTNIPIVEDPKTGEVSLPGAAIVEIKDLEHVFQLLQIGETNRHAANTKMNTESSR 259

Query: 121 SHAILVVYIRRSVHEIIDKITSEEKDTRTE-LPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           SHAIL+++++RS+  I +++T+   ++  E  PGD  +PLV KSKLLIVDLAGSERIDKS
Sbjct: 260 SHAILIIHLQRSLR-IKEEMTTSIPNSAEEFFPGD--IPLVLKSKLLIVDLAGSERIDKS 316

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           GSEG ++EEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTR+LRDSFGG+ARTSL++T
Sbjct: 317 GSEGHMIEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRMLRDSFGGTARTSLVVT 376

Query: 240 VGPSARNHAETTSTIMFGQRG 260
           +GPSAR+++ET+STI+FGQR 
Sbjct: 377 IGPSARHYSETSSTILFGQRA 397

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
TAIR|locus:2025497	915	ARK2 "armadillo repeat kinesin	0.958	0.279	0.661	1.5e-83
ZFIN|ZDB-GENE-110408-6	992	si:ch73-130n22.1 "si:ch73-130n	0.389	0.104	0.579	9.8e-45
ZFIN|ZDB-GENE-070629-2	968	kif5ba "kinesin family member	0.359	0.099	0.625	6.7e-43
ASPGD|ASPL0000033533	966	kinA [Emericella nidulans (tax	0.370	0.102	0.58	7.5e-43
ZFIN|ZDB-GENE-070912-141	1033	kif5aa "kinesin family member	0.389	0.100	0.560	4.9e-42
FB|FBgn0001308	975	Khc "Kinesin heavy chain" [Dro	0.389	0.106	0.552	5.3e-42
UNIPROTKB|E1C3A1	966	KIF5B "Uncharacterized protein	0.359	0.099	0.583	6.1e-42
UNIPROTKB|F1RWC5	960	KIF5B "Uncharacterized protein	0.359	0.1	0.583	7.7e-42
UNIPROTKB|F1N1G7	963	KIF5B "Uncharacterized protein	0.359	0.099	0.583	7.8e-42
UNIPROTKB|E2QTN0	963	KIF5B "Uncharacterized protein	0.359	0.099	0.583	7.8e-42

TAIR|locus:2025497 ARK2 "armadillo repeat kinesin 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 172/260 (66%), Positives = 207/260 (79%)

Query:     1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
             MAYGQTGTGKT+TLGRLG +D + RGIMVR++EDII   S+ +DS+ VSYLQLYME+IQD
Sbjct:   142 MAYGQTGTGKTFTLGRLGDEDTAARGIMVRSMEDIIGGTSLDTDSISVSYLQLYMETIQD 201

Query:    61 LLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLNTESSR 120
             LL P   NI I EDP+TG+VSLPGAT V+            +GE +R AANTKLNTESSR
Sbjct:   202 LLDPTNDNIAIVEDPRTGDVSLPGATHVEIRNQQNFLELLQLGETHRVAANTKLNTESSR 261

Query:   121 SHAILVVYIRRSVHEIIDKITSE-EKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
             SHAIL+V+++RSV E    +++E E  +    P     PLVR+SKL++VDLAGSER+ KS
Sbjct:   262 SHAILMVHVKRSVVENEFPVSNEMESSSHFVRPSK---PLVRRSKLVLVDLAGSERVHKS 318

Query:   180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
             GSEG +LEEAK INLSLS+LGKCINA+AENSPH+P RDSKLTRLLRDSFGG+ARTSLI+T
Sbjct:   319 GSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDSKLTRLLRDSFGGTARTSLIVT 378

Query:   240 VGPSARNHAETTSTIMFGQR 259
             +GPS R+  ETTSTI+FGQR
Sbjct:   379 IGPSPRHRGETTSTILFGQR 398

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0048364 "root development" evidence=IMP

ZFIN|ZDB-GENE-110408-6 si:ch73-130n22.1 "si:ch73-130n22.1" [Danio rerio (taxid:7955)]

 Score = 297 (109.6 bits), Expect = 9.8e-45, Sum P(2) = 9.8e-45
 Identities = 62/107 (57%), Positives = 81/107 (75%)

Query:   156 HVPLVRK--SKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-H 212
             HV   +K   KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALAE +  H
Sbjct:   217 HVETEQKLCGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTH 276

Query:   213 IPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             +P RDSK+TR+L+DS GG+ RT++ I   PSA N AET ST+MFGQR
Sbjct:   277 VPYRDSKMTRILQDSLGGNCRTTMFICCSPSAYNDAETKSTLMFGQR 323

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-070629-2 kif5ba "kinesin family member 5B, a" [Danio rerio (taxid:7955)]

 Score = 306 (112.8 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
 Identities = 60/96 (62%), Positives = 78/96 (81%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRL 223
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLSSLG  I+ALAE S ++P RDSK+TR+
Sbjct:   226 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSSLGNVISALAEGSTYVPYRDSKMTRI 285

Query:   224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             L+DS GG+ RT+++I   PSA N AET ST+MFGQR
Sbjct:   286 LQDSLGGNCRTTIVICCSPSAFNEAETKSTLMFGQR 321

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

ASPGD|ASPL0000033533 kinA [Emericella nidulans (taxid:162425)]

 Score = 280 (103.6 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
 Identities = 58/100 (58%), Positives = 75/100 (75%)

Query:   161 RKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSK 219
             +  +L +VDLAGSE++ K+G+ G  LEEAK IN SLS+LG  INAL +  S HIP RDSK
Sbjct:   231 KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSTHIPYRDSK 290

Query:   220 LTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             LTR+L++S GG++RT+LII   PS+ N AET ST+ FG R
Sbjct:   291 LTRILQESLGGNSRTTLIINCSPSSYNDAETVSTLRFGVR 330

GO:0005737 "cytoplasm" evidence=IDA

GO:0007019 "microtubule depolymerization" evidence=IMP

GO:0007097 "nuclear migration" evidence=IMP

GO:0005881 "cytoplasmic microtubule" evidence=IDA

GO:0005934 "cellular bud tip" evidence=IEA

GO:0000131 "incipient cellular bud site" evidence=IEA

GO:0043332 "mating projection tip" evidence=IEA

GO:0005935 "cellular bud neck" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

ZFIN|ZDB-GENE-070912-141 kif5aa "kinesin family member 5A, a" [Danio rerio (taxid:7955)]

 Score = 288 (106.4 bits), Expect = 4.9e-42, Sum P(2) = 4.9e-42
 Identities = 60/107 (56%), Positives = 80/107 (74%)

Query:   156 HVPLVRK--SKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-H 212
             HV   +K   KL +VDLAGSE++ K+G+ G +L+EAK IN SLS+LG  I+ALAE +  H
Sbjct:   217 HVETEQKLCGKLYLVDLAGSEKVSKTGAAGAVLDEAKNINKSLSALGNVISALAEGTKSH 276

Query:   213 IPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             +P RDSK+TR+L+DS GG+ RT++ I   PS+ N AET ST+MFGQR
Sbjct:   277 VPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQR 323

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

FB|FBgn0001308 Khc "Kinesin heavy chain" [Drosophila melanogaster (taxid:7227)]

 Score = 283 (104.7 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
 Identities = 58/105 (55%), Positives = 81/105 (77%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTR 222
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALA+ N  HIP RDSKLTR
Sbjct:   233 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTR 292

Query:   223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV 267
             +L++S GG+ART+++I   P++ N +ET ST+ FG+R     +VV
Sbjct:   293 ILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVV 337

GO:0005737 "cytoplasm" evidence=IDA

GO:0003774 "motor activity" evidence=NAS

GO:0008017 "microtubule binding" evidence=ISS;IDA

GO:0005871 "kinesin complex" evidence=ISS;NAS;IDA

GO:0007018 "microtubule-based movement" evidence=ISS;IDA;NAS

GO:0003777 "microtubule motor activity" evidence=ISS;IDA;NAS

GO:0035371 "microtubule plus end" evidence=IDA

GO:0007269 "neurotransmitter secretion" evidence=NAS

GO:0019227 "neuronal action potential propagation" evidence=NAS

GO:0007317 "regulation of pole plasm oskar mRNA localization" evidence=IMP;TAS

GO:0008574 "plus-end-directed microtubule motor activity" evidence=TAS

GO:0007315 "pole plasm assembly" evidence=IMP

GO:0007310 "oocyte dorsal/ventral axis specification" evidence=IMP

GO:0045451 "pole plasm oskar mRNA localization" evidence=NAS

GO:0007303 "cytoplasmic transport, nurse cell to oocyte" evidence=TAS

GO:0008088 "axon cargo transport" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0001754 "eye photoreceptor cell differentiation" evidence=IGI

GO:0016482 "cytoplasmic transport" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0047497 "mitochondrion transport along microtubule" evidence=IMP

GO:0008103 "oocyte microtubule cytoskeleton polarization" evidence=IMP

GO:0048311 "mitochondrion distribution" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007409 "axonogenesis" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0010970 "microtubule-based transport" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=IMP

GO:0030011 "maintenance of cell polarity" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0048741 "skeletal muscle fiber development" evidence=IMP

GO:0040023 "establishment of nucleus localization" evidence=IMP

GO:0048312 "intracellular distribution of mitochondria" evidence=IMP

UNIPROTKB|E1C3A1 KIF5B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 296 (109.3 bits), Expect = 6.1e-42, Sum P(2) = 6.1e-42
 Identities = 56/96 (58%), Positives = 79/96 (82%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRL 223
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALAE+S ++P RDSK+TR+
Sbjct:   226 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAESSTYVPYRDSKMTRI 285

Query:   224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             L+DS GG+ RT+++I   PS+ N +ET ST++FGQR
Sbjct:   286 LQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007028 "cytoplasm organization" evidence=IEA

GO:0031982 "vesicle" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0035617 "stress granule disassembly" evidence=IEA

GO:0042391 "regulation of membrane potential" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0043268 "positive regulation of potassium ion transport" evidence=IEA

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

UNIPROTKB|F1RWC5 KIF5B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 295 (108.9 bits), Expect = 7.7e-42, Sum P(2) = 7.7e-42
 Identities = 56/96 (58%), Positives = 78/96 (81%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRL 223
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+
Sbjct:   223 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRI 282

Query:   224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             L+DS GG+ RT+++I   PS+ N +ET ST++FGQR
Sbjct:   283 LQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 318

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

GO:0043268 "positive regulation of potassium ion transport" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0042391 "regulation of membrane potential" evidence=IEA

GO:0035617 "stress granule disassembly" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0031982 "vesicle" evidence=IEA

GO:0007028 "cytoplasm organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|F1N1G7 KIF5B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 295 (108.9 bits), Expect = 7.8e-42, Sum P(2) = 7.8e-42
 Identities = 56/96 (58%), Positives = 78/96 (81%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRL 223
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+
Sbjct:   226 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRI 285

Query:   224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             L+DS GG+ RT+++I   PS+ N +ET ST++FGQR
Sbjct:   286 LQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

GO:0043268 "positive regulation of potassium ion transport" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0042391 "regulation of membrane potential" evidence=IEA

GO:0035617 "stress granule disassembly" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0031982 "vesicle" evidence=IEA

GO:0007028 "cytoplasm organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

UNIPROTKB|E2QTN0 KIF5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 295 (108.9 bits), Expect = 7.8e-42, Sum P(2) = 7.8e-42
 Identities = 56/96 (58%), Positives = 78/96 (81%)

Query:   164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRL 223
             KL +VDLAGSE++ K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+
Sbjct:   226 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRI 285

Query:   224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
             L+DS GG+ RT+++I   PS+ N +ET ST++FGQR
Sbjct:   286 LQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQR 321

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IEA

GO:0043268 "positive regulation of potassium ion transport" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0042391 "regulation of membrane potential" evidence=IEA

GO:0035617 "stress granule disassembly" evidence=IEA

GO:0035253 "ciliary rootlet" evidence=IEA

GO:0031982 "vesicle" evidence=IEA

GO:0007028 "cytoplasm organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0DV28	ARK1_ORYSJ	No assigned EC number	0.7330	0.9438	0.2666	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018145001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (995 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	267
cd00106	328	cd00106, KISc, Kinesin motor domain	2e-92
pfam00225	326	pfam00225, Kinesin, Kinesin motor domain	3e-92
smart00129	335	smart00129, KISc, Kinesin motor, catalytic domain	1e-85
cd01369	325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	3e-84
cd01366	329	cd01366, KISc_C_terminal, Kinesin motor domain, KI	9e-73
cd01371	333	cd01371, KISc_KIF3, Kinesin motor domain, kinesins	4e-68
cd01372	341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	2e-66
cd01374	321	cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E	5e-65
cd01364	352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	3e-64
cd01365	356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	8e-62
cd01370	338	cd01370, KISc_KIP3_like, Kinesin motor domain, KIP	1e-61
cd01375	334	cd01375, KISc_KIF9_like, Kinesin motor domain, KIF	1e-58
cd01376	319	cd01376, KISc_KID_like, Kinesin motor domain, KIF2	2e-56
cd01373	337	cd01373, KISc_KLP2_like, Kinesin motor domain, KLP	2e-55
COG5059	568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	3e-52
cd01367	322	cd01367, KISc_KIF2_like, Kinesin motor domain, KIF	5e-50
cd01368	345	cd01368, KISc_KIF23_like, Kinesin motor domain, KI	2e-47
PLN03188	1320	PLN03188, PLN03188, kinesin-12 family protein; Pro	2e-40
cd01363	186	cd01363, Motor_domain, Myosin and Kinesin motor do	1e-32

>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain

 Score =  275 bits (705), Expect = 2e-92
 Identities = 116/268 (43%), Positives = 156/268 (58%), Gaps = 33/268 (12%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDI---ISSMSVTSDS--VEVSYLQLYM 55
            AYGQTG+GKTYT+   G     + GI+ RALED+   I      + S  V VSYL++Y 
Sbjct: 83  FAYGQTGSGKTYTMF--GSP--KDPGIIPRALEDLFNLIDERKEKNKSFSVSVSYLEIYN 138

Query: 56  ESIQDLLAPE--KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           E + DLL+PE     + + EDPK G V + G T V++   +  L LLQ G  NR  A+T 
Sbjct: 139 EKVYDLLSPEPPSKPLSLREDPKGG-VYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTA 197

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N  SSRSHAI  +++ +                       N    ++ SKL +VDLAGS
Sbjct: 198 MNERSSRSHAIFTIHVEQRNTT-------------------NDGRSIKSSKLNLVDLAGS 238

Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGS 231
           ER  K+G+EG  L+EAK IN SLS+LG  I+AL+      HIP RDSKLTRLL+DS GG+
Sbjct: 239 ERAKKTGAEGDRLKEAKNINKSLSALGNVISALSSGQKKKHIPYRDSKLTRLLQDSLGGN 298

Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           ++T +I  + PS+ N+ ET ST+ F  R
Sbjct: 299 SKTLMIANISPSSENYDETLSTLRFASR 326

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 328

>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain

 Score =  274 bits (704), Expect = 3e-92
 Identities = 119/268 (44%), Positives = 157/268 (58%), Gaps = 32/268 (11%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG+GKTYT+   G     E GI+ RALED+   +    +     SV VSYL++Y 
Sbjct: 78  FAYGQTGSGKTYTM--EGDPPEEEPGIIPRALEDLFERIEERKERKWSFSVRVSYLEIYN 135

Query: 56  ESIQDLLAPEKVN--IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           E I DLL+P      + I EDPK G V + G T V++   + +L+LL++G  NR  A+T 
Sbjct: 136 EKIYDLLSPSSKKKKLRIREDPKKG-VYVKGLTEVEVTSAEEVLELLELGNKNRTVASTN 194

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N ESSRSHAI  + + +   +                        V+  KL +VDLAGS
Sbjct: 195 MNEESSRSHAIFTITVEQRNRDTDG--------------------SVKTGKLNLVDLAGS 234

Query: 174 ERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGS 231
           ER  K+G + G  L+EA  IN SLS+LG  INALAEN S HIP RDSKLTRLL+DS GG+
Sbjct: 235 ERASKTGAAGGRRLKEAANINKSLSALGNVINALAENQSSHIPYRDSKLTRLLQDSLGGN 294

Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           ++T +I  + PS  N+ ET ST+ F  R
Sbjct: 295 SKTLMIANISPSDSNYEETLSTLRFASR 322

Length = 326

>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain

 Score =  258 bits (662), Expect = 1e-85
 Identities = 118/274 (43%), Positives = 160/274 (58%), Gaps = 31/274 (11%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
            AYGQTG+GKTYT+   G  D    GI+ RAL+D+   +    +    SV+VSYL++Y E
Sbjct: 84  FAYGQTGSGKTYTMI--GTPD--SPGIIPRALKDLFEKIDKREEGWQFSVKVSYLEIYNE 139

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLL P    + I ED K G V + G T + +   + +  LL+ G  NR  A TK+N 
Sbjct: 140 KIRDLLNPSSKKLEIREDEK-GGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNE 198

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSHA+  + + +       KI +    +             + SKL +VDLAGSER 
Sbjct: 199 ESSRSHAVFTITVEQ-------KIKNSSSGS------------GKASKLNLVDLAGSERA 239

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAEN--SPHIPTRDSKLTRLLRDSFGGSART 234
            K+G+EG  L+EA  IN SLS+LG  INALA++  S HIP RDSKLTRLL+DS GG+++T
Sbjct: 240 KKTGAEGDRLKEAGNINKSLSALGNVINALAQHSKSRHIPYRDSKLTRLLQDSLGGNSKT 299

Query: 235 SLIITVGPSARNHAETTSTIMFGQR-GSIRISVV 267
            +I  V PS+ N  ET ST+ F  R   I+   +
Sbjct: 300 LMIANVSPSSSNLEETLSTLRFASRAKEIKNKPI 333

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division. Length = 335

>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

 Score =  254 bits (652), Expect = 3e-84
 Identities = 119/264 (45%), Positives = 165/264 (62%), Gaps = 30/264 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASE-RGIMVRALEDI---ISSMSVTSD-SVEVSYLQLYME 56
           AYGQTG+GKTYT+   G     E +GI+ R + DI   ISSM    +  V+VSYL++YME
Sbjct: 82  AYGQTGSGKTYTM--EGPPGDPELKGIIPRIVHDIFEHISSMDENLEFHVKVSYLEIYME 139

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLL   K N+ ++ED   G V + G T   +   + +L+++  G+ NR  A+T +N 
Sbjct: 140 KIRDLLDVSKDNLQVHEDKNRG-VYVKGLTERFVSSPEEVLEVINEGKSNRAVASTNMNE 198

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I +             IT ++++  T           ++ KL +VDLAGSE++
Sbjct: 199 ESSRSHSIFL-------------ITLKQENVETGS--------KKRGKLFLVDLAGSEKV 237

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+EG  LEEAK IN SLS+LG  INAL +  S HIP RDSKLTR+L+DS GG++RT+
Sbjct: 238 SKTGAEGQTLEEAKKINKSLSALGNVINALTDGKSTHIPYRDSKLTRILQDSLGGNSRTT 297

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           LII   PS+ N +ET ST+ FG R
Sbjct: 298 LIICCSPSSYNESETLSTLRFGAR 321

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 325

>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

 Score =  225 bits (575), Expect = 9e-73
 Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 35/272 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG+GKTYT+   G  +    GI+ RALE + ++     +     ++  S L++Y E
Sbjct: 83  AYGQTGSGKTYTM--EGPPE--NPGIIPRALEQLFNTAEELKEKGWSYTITASMLEIYNE 138

Query: 57  SIQDLLAPEKVNIP---INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           +I+DLLA +        I  D K GE  +   T V +   + + +LL +G  NR  A+T 
Sbjct: 139 TIRDLLATKPAPKKKLEIKHDSK-GETYVTNLTEVPVSSPEEVTRLLNLGSKNRSVASTN 197

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N  SSRSHA+  + IR          T+ +   +T            + KL +VDLAGS
Sbjct: 198 MNEHSSRSHAVFQLKIRG---------TNLQTGEQT------------RGKLNLVDLAGS 236

Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           ER+ KSG+ G  L+EA+ IN SLS+LG  I+AL     H+P R+SKLT LL+DS GG+++
Sbjct: 237 ERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGNSK 296

Query: 234 TSLIITVGPSARNHAETTSTIMFGQR-GSIRI 264
           T + + + P   N +ET  ++ F  R  S+ +
Sbjct: 297 TLMFVNISPLESNLSETLCSLRFASRVRSVEL 328

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329

>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins

 Score =  213 bits (545), Expect = 4e-68
 Identities = 102/264 (38%), Positives = 151/264 (57%), Gaps = 27/264 (10%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASE-RGIMVRALEDIISSMSVTSDS---VEVSYLQLYMES 57
           AYGQTGTGKT+T+   G  +  E RGI+  +   I   ++   +    V VSYL++Y E 
Sbjct: 87  AYGQTGTGKTFTME--GVREPPELRGIIPNSFAHIFGHIAKAENVQFLVRVSYLEIYNEE 144

Query: 58  IQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
           ++DLL  + K  + + E P  G V +   ++  +++ + + +L+ +G  NR    T +N 
Sbjct: 145 VRDLLGKDQKKKLELKERPDRG-VYVKDLSMFVVKNAEEMDKLMTLGNKNRSVGATNMNE 203

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           +SSRSH+I  + I  S                    G+NH+   R  KL +VDLAGSER 
Sbjct: 204 DSSRSHSIFTITIECS---------------EKGEDGENHI---RVGKLNLVDLAGSERQ 245

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  L+EA  INLSLS+LG  I+AL +    HIP RDSKLTRLL+DS GG+++T 
Sbjct: 246 SKTGATGDRLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNSKTV 305

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           +   +GP+  N+ ET ST+ +  R
Sbjct: 306 MCANIGPADYNYDETLSTLRYANR 329

Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 333

>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily

 Score =  209 bits (534), Expect = 2e-66
 Identities = 104/271 (38%), Positives = 153/271 (56%), Gaps = 24/271 (8%)

Query: 1   MAYGQTGTGKTYTLGRLGKD--DASERGIMVRALEDIISSMSVTSDSVE----VSYLQLY 54
           +AYGQTG+GKTYT+G       D  E GI+ RA++ I   +    D  +    VS+L+LY
Sbjct: 78  LAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKIDEKKDEPDFQLKVSFLELY 137

Query: 55  MESIQDLLAP---EKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAAN 111
            E ++DLL+P   EK  I I ED K G + + G T V +     ++  L+ G ++R  A+
Sbjct: 138 NEEVRDLLSPSTSEKSPIQIREDSK-GNIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTAS 196

Query: 112 TKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLA 171
           T +N++SSRSHAI  + + ++           +      + GD+    +  SK   VDLA
Sbjct: 197 TAMNSQSSRSHAIFTITLEQTR----------KNGPIAPMSGDDKNSTLT-SKFHFVDLA 245

Query: 172 GSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLTRLLRDSF 228
           GSER+ K+G+ G  L+E   IN  L +LG  I+AL + S    H+P RDSKLTRLL+DS 
Sbjct: 246 GSERLKKTGATGDRLKEGISINSGLLALGNVISALGDESKKGSHVPYRDSKLTRLLQDSL 305

Query: 229 GGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           GG++ T +I  V P+  N  ET +T+ +  R
Sbjct: 306 GGNSHTLMIACVSPADSNFEETLNTLKYANR 336

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341

>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis

 Score =  205 bits (523), Expect = 5e-65
 Identities = 108/264 (40%), Positives = 147/264 (55%), Gaps = 29/264 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS---VEVSYLQLYMES 57
            AYGQT +GKT+T+      D  E GI+  A+ DI   +  T D    + VSYL++Y E 
Sbjct: 78  FAYGQTSSGKTFTM----SGDEQEPGIIPLAVRDIFQRIQDTPDREFLLRVSYLEIYNEK 133

Query: 58  IQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTE 117
           I+DLL+P    + I EDP  G V + G T   +   +HLLQL+  GE NRH   T  N  
Sbjct: 134 IKDLLSPSPQELRIREDPNKG-VVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNER 192

Query: 118 SSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SSRSH I              ++T E ++      G      VR S L ++DLAGSER  
Sbjct: 193 SSRSHTIF-------------QLTIESRERGDSESGT-----VRVSTLNLIDLAGSERAS 234

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAE--NSPHIPTRDSKLTRLLRDSFGGSARTS 235
           ++G  G   +E  FIN SL +LG  I+ L+E  NS HIP RDSKLTR+L+ S  G+ART+
Sbjct: 235 QTG-AGERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPYRDSKLTRILQPSLSGNARTA 293

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           +I T+ P++ +  ET +T+ F  R
Sbjct: 294 IICTISPASSHVEETLNTLKFASR 317

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321

>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

 Score =  204 bits (521), Expect = 3e-64
 Identities = 110/271 (40%), Positives = 150/271 (55%), Gaps = 31/271 (11%)

Query: 2   AYGQTGTGKTYTL-GRLGKD------DASERGIMVRALEDIIS--SMSVTSDSVEVSYLQ 52
           AYGQTGTGKTYT+ G    +       +   GI+ RAL  +        T  SV+VSYL+
Sbjct: 87  AYGQTGTGKTYTMEGDRTDNKGSTWELSPHAGIIPRALYQLFEKLESQNTEYSVKVSYLE 146

Query: 53  LYMESIQDLLAPE---KVNIPINEDPK-TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRH 108
           LY E + DLL+ E      + I +D    G V + G   + + + +  L+LL+ G   R 
Sbjct: 147 LYNEELFDLLSSESDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRK 206

Query: 109 AANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIV 168
            A T +N +SSRSH+I  + I       I + T   ++            LV+  KL +V
Sbjct: 207 TAATLMNDQSSRSHSIFSITI------HIKETTISGEE------------LVKIGKLNLV 248

Query: 169 DLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF 228
           DLAGSE I +SG+E     EA  IN SL +LG+ INAL E SPHIP R+SKLTRLL+DS 
Sbjct: 249 DLAGSENIGRSGAENKRAREAGNINQSLLTLGRVINALVEKSPHIPYRESKLTRLLQDSL 308

Query: 229 GGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           GG  +TS+I T+ P++ N  ET ST+ +  R
Sbjct: 309 GGRTKTSIIATISPASINLEETLSTLEYAHR 339

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 352

>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins

 Score =  197 bits (504), Expect = 8e-62
 Identities = 97/274 (35%), Positives = 154/274 (56%), Gaps = 38/274 (13%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG+GK+YT+  +G  +  E+GI+ R  E++   +    +      VEVSY+++Y E
Sbjct: 94  AYGQTGSGKSYTM--MGYKE--EKGIIPRLCEELFQRIESKKEQNLSYEVEVSYMEIYNE 149

Query: 57  SIQDLLAP---EKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
            ++DLL P    K N+ + E P  G   +   + V +   + +  LL+ G  +R  A+T 
Sbjct: 150 KVRDLLNPKKKNKGNLKVREHPVLG-PYVEDLSKVAVTSYEDIQNLLEEGNKSRTTASTN 208

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N  SSRSHA+  + + +   +    +T+E                 + SK+ +VDLAGS
Sbjct: 209 MNDTSSRSHAVFTIVLTQKKLDKETDLTTE-----------------KVSKISLVDLAGS 251

Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--------PHIPTRDSKLTRLLR 225
           ER   +G+EG  L+E   IN SL++LGK I+ALA+NS          IP RDS LT LL+
Sbjct: 252 ERASSTGAEGDRLKEGSNINKSLTTLGKVISALADNSSAKSKKKSSFIPYRDSVLTWLLK 311

Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           ++ GG+++T++I T+ P+  N+ ET ST+ +  R
Sbjct: 312 ENLGGNSKTAMIATISPADINYEETLSTLRYADR 345

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively. Length = 356

>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup

 Score =  197 bits (503), Expect = 1e-61
 Identities = 101/265 (38%), Positives = 147/265 (55%), Gaps = 30/265 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYG TG GKT+T+  LG D  S+ G+MV  ++D+   +    D     V +SYL++Y E+
Sbjct: 93  AYGATGAGKTHTM--LGTD--SDPGLMVLTMKDLFDKIEERKDDKEFEVSLSYLEIYNET 148

Query: 58  IQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTE 117
           I+DLL+P    + + EDP  G + + G T  + +  + +L+LL  G  NR    T+ N  
Sbjct: 149 IRDLLSPSSGPLELREDPNQG-IVVAGLTEHQPKSAEEILELLMKGNRNRTQEPTEANAT 207

Query: 118 SSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SSRSHA+L + +R+                RT           R  KL ++DLAGSER  
Sbjct: 208 SSRSHAVLQITVRQK--------------DRTASINQQV----RIGKLSLIDLAGSERAS 249

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLTRLLRDSFGGSART 234
            + + G  L+E   IN SL +LG CINAL +      HIP RDSKLTRLL+DS GG+ +T
Sbjct: 250 ATNNRGQRLKEGANINRSLLALGNCINALVDGKKKNKHIPYRDSKLTRLLKDSLGGNCKT 309

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +I  + PS+ ++ ET +T+ +  R
Sbjct: 310 VMIANISPSSSHYEETHNTLKYANR 334

The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 338

>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling

 Score =  189 bits (481), Expect = 1e-58
 Identities = 103/269 (38%), Positives = 151/269 (56%), Gaps = 31/269 (11%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDI---ISSMSVTSDSVEVSYLQLYMES 57
            AYGQTG GKT+T+   G +   +RG++ RALE +   ++  +  + +V VSYL++Y E 
Sbjct: 85  FAYGQTGAGKTFTMTG-GTESYKDRGLIPRALEQVFREVAMRATKTYTVHVSYLEIYNEQ 143

Query: 58  IQDLLAPEKVNIP------INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAAN 111
           + DLL      +       I ED +   + + G ++      +  L LL +GE NR  A 
Sbjct: 144 LYDLLGDTPEALESLPAVTILEDSE-QNIHVKGLSLHSATTEEEALNLLFLGETNRTIAE 202

Query: 112 TKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLA 171
           T +N  SSRSH I  +++                 +R+   G     +VR SKL +VDLA
Sbjct: 203 TSMNQASSRSHCIFTIHLE----------------SRSREAGSE---VVRLSKLNLVDLA 243

Query: 172 GSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGG 230
           GSER+ K+G  G +L+EAK+IN SLS L + INAL+E +  H+P R+SKLT +LRDS GG
Sbjct: 244 GSERVSKTGVSGQVLKEAKYINKSLSFLEQVINALSEKARTHVPYRNSKLTHVLRDSLGG 303

Query: 231 SARTSLIITVGPSARNHAETTSTIMFGQR 259
           + +T ++ T+     N  ET ST+ F QR
Sbjct: 304 NCKTVMLATIWVEPSNLDETLSTLRFAQR 332

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 334

>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup

 Score =  183 bits (466), Expect = 2e-56
 Identities = 92/261 (35%), Positives = 137/261 (52%), Gaps = 30/261 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIIS--SMSVTSDSVEVSYLQLYMESIQ 59
           AYG TG GKT+T+  LG  +  E G++ R L D++        + +  +SY ++Y E + 
Sbjct: 86  AYGSTGAGKTHTM--LGDPN--EPGLIPRTLSDLLRMGRKQAWTGAFSMSYYEIYNEKVY 141

Query: 60  DLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESS 119
           DLL P K  +PI ED K G + + G T   ++ +    +       NR  A TKLN  SS
Sbjct: 142 DLLEPAKKELPIRED-KDGNILIVGLTSKPIKSMAEFEEAYIPASKNRTVAATKLNDNSS 200

Query: 120 RSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           RSHA+L +           K+T    +            +  + KL ++DLAGSE   ++
Sbjct: 201 RSHAVLRI-----------KVTQPASN------------IQLEGKLNLIDLAGSEDNRRT 237

Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           G+EG  L+E+  IN SL  L K ++AL +  P IP R+SKLTRLL+DS GG +R  ++  
Sbjct: 238 GNEGIRLKESAAINSSLFVLSKVVDALNKGLPRIPYRESKLTRLLQDSLGGGSRCIMVAN 297

Query: 240 VGPSARNHAETTSTIMFGQRG 260
           + P    + +T ST+ F  R 
Sbjct: 298 IAPERSFYQDTLSTLNFASRS 318

Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 319

>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup

 Score =  181 bits (460), Expect = 2e-55
 Identities = 111/275 (40%), Positives = 150/275 (54%), Gaps = 36/275 (13%)

Query: 1   MAYGQTGTGKTYT-LGRLGKDDAS---ERGIMVRALEDIISSM--------SVTSDSVEV 48
            AYGQTG+GKTYT +G    DD S    +G++ R  E + S +               + 
Sbjct: 79  FAYGQTGSGKTYTMMGPSSSDDESPHGLQGVIPRIFEYLFSLIQREEEKRGDGLKFLCKC 138

Query: 49  SYLQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRH 108
           S+L++Y E I DLL P   N+ I ED K G V +   T   +   + + Q+L  G  NR 
Sbjct: 139 SFLEIYNEQITDLLDPTSRNLKIREDIKKG-VYVENLTEEYVSSYEDVYQVLLKGLSNRK 197

Query: 109 AANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIV 168
            A T +N+ESSRSHA+    I           + E+K + T +         R S+L +V
Sbjct: 198 VAATSMNSESSRSHAVFTCTIE----------SWEKKASSTNI---------RTSRLNLV 238

Query: 169 DLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS----PHIPTRDSKLTRLL 224
           DLAGSER    G+EG  L+EAK IN SLS+LG  I AL + +     H+P RDSKLT LL
Sbjct: 239 DLAGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAHGKQRHVPYRDSKLTFLL 298

Query: 225 RDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           RDS GG+A+T++I  V PS++   ET ST+ F QR
Sbjct: 299 RDSLGGNAKTTIIANVSPSSKCFGETLSTLKFAQR 333

Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 337

>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]

 Score =  178 bits (453), Expect = 3e-52
 Identities = 105/274 (38%), Positives = 151/274 (55%), Gaps = 33/274 (12%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
            AYGQTG+GKTYT+         E GI+  +L+++ S +   S     +V +SYL++Y E
Sbjct: 94  FAYGQTGSGKTYTMS----GTEEEPGIIPLSLKELFSKLEDLSMTKDFAVSISYLEIYNE 149

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I DLL+P + ++ I ED   G V + G T   +   + +L LL+ GE NR  A+T++N 
Sbjct: 150 KIYDLLSPNEESLNIREDSLLG-VKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEIND 208

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I  + +             +   T               SKL +VDLAGSER 
Sbjct: 209 ESSRSHSIFQIELASKN---------KVSGTS------------ETSKLSLVDLAGSERA 247

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP--HIPTRDSKLTRLLRDSFGGSART 234
            ++G+ G  L+E   IN SL +LG  INAL +     HIP R+SKLTRLL+DS GG+  T
Sbjct: 248 ARTGNRGTRLKEGASINKSLLTLGNVINALGDKKKSGHIPYRESKLTRLLQDSLGGNCNT 307

Query: 235 SLIITVGPSARNHAETTSTIMFGQRG-SIRISVV 267
            +I T+ PS+ +  ET +T+ F  R  SI+  + 
Sbjct: 308 RVICTISPSSNSFEETINTLKFASRAKSIKNKIQ 341

Length = 568

>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group

 Score =  166 bits (423), Expect = 5e-50
 Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 33/261 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD--SVEVSYLQLYMESIQ 59
           AYGQTG+GKTYT+      D ++ G+   A  DI   ++  +D   V VS+ ++Y   + 
Sbjct: 90  AYGQTGSGKTYTML----GDENQEGLYALAARDIFRLLAQPNDDLGVTVSFFEIYGGKLF 145

Query: 60  DLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESS 119
           DLL  ++  + + ED   G V + G T   +  +D LL+L++ G   R   +T  N +SS
Sbjct: 146 DLLN-DRKRLSVLED-GKGNVQIVGLTEKPVTSVDELLELIESGNSLRTTGSTGANDQSS 203

Query: 120 RSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER-IDK 178
           RSHAIL + ++                    L G          KL  +DLAGSER  D 
Sbjct: 204 RSHAILQIILKNKKLNK--------------LLG----------KLSFIDLAGSERGADT 239

Query: 179 SGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLII 238
           S  +    +E   IN SL +L +CI ALA N  H+P R SKLT++LRDSF G+++T +I 
Sbjct: 240 SEHDRQTRKEGAEINKSLLALKECIRALASNKAHVPFRGSKLTQVLRDSFIGNSKTVMIA 299

Query: 239 TVGPSARNHAETTSTIMFGQR 259
           T+ PSA +   T +T+ +  R
Sbjct: 300 TISPSASSCEHTLNTLRYADR 320

KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 322

>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup

 Score =  160 bits (407), Expect = 2e-47
 Identities = 93/268 (34%), Positives = 142/268 (52%), Gaps = 34/268 (12%)

Query: 2   AYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQD 60
            YG T +GKTYT+ G  G     + GI+ R+L+ I +S+     SV VSY+++Y   I D
Sbjct: 94  TYGVTNSGKTYTMQGSPG-----DGGILPRSLDVIFNSIG--GYSVFVSYVEIYNNYIYD 146

Query: 61  LLAP------EKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
           LL        ++ ++ + ED   G + + G T V++   +   ++ + G+ NR  A TKL
Sbjct: 147 LLEDSPSSTKKRQSLRLRED-HNGNMYVAGLTEVEVSSTEEAREVFKRGQKNRRVAGTKL 205

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N ESSRSH++  +           K+     D+  ++  D     V  S+L +VDLAGSE
Sbjct: 206 NRESSRSHSVFTI-----------KLVQAPGDSDGDVDQDKDQITV--SQLSLVDLAGSE 252

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------SPHIPTRDSKLTRLLRDSF 228
           R  ++ + G  L+EA  IN SL +LGKCI  L EN      +  +P RDSKLT L ++ F
Sbjct: 253 RTSRTQNTGERLKEAGNINTSLMTLGKCIEVLRENQLSGSTNKMVPYRDSKLTHLFQNYF 312

Query: 229 GGSARTSLIITVGPSARNHAETTSTIMF 256
            G  +  +I+ V P A ++ ET   + F
Sbjct: 313 DGEGKARMIVNVNPCASDYDETLHVMKF 340

Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 345

>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional

 Score =  148 bits (375), Expect = 2e-40
 Identities = 100/278 (35%), Positives = 146/278 (52%), Gaps = 38/278 (13%)

Query: 2   AYGQTGTGKTYTL-----GRLGKDDASE-RGIMVRALE---DIISSMSVTSDSVEVSY-- 50
           AYGQTG+GKTYT+     G L +  + + +G+  R  E     I+   +     ++ Y  
Sbjct: 171 AYGQTGSGKTYTMWGPANGLLEEHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQC 230

Query: 51  ----LQLYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVN 106
               L++Y E I DLL P + N+ I ED K+G V +   T   ++ +  + QLL  G  N
Sbjct: 231 RCSFLEIYNEQITDLLDPSQKNLQIREDVKSG-VYVENLTEEYVKTMKDVTQLLIKGLSN 289

Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R    T +N ESSRSH++    +      + D ++S                  + S++ 
Sbjct: 290 RRTGATSINAESSRSHSVFTCVVESRCKSVADGLSS-----------------FKTSRIN 332

Query: 167 IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-----HIPTRDSKLT 221
           +VDLAGSER   +G+ G  L+EA  IN SLS LG  IN LAE S      HIP RDS+LT
Sbjct: 333 LVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQTGKQRHIPYRDSRLT 392

Query: 222 RLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
            LL++S GG+A+ +++  + PS    +ET ST+ F QR
Sbjct: 393 FLLQESLGGNAKLAMVCAISPSQSCKSETFSTLRFAQR 430

Length = 1320

>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain

 Score =  117 bits (295), Expect = 1e-32
 Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 19/166 (11%)

Query: 77  TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEI 136
           T E    GA ++  R +  ++ L+  G  NR  A T +N  SSRSH++  ++        
Sbjct: 40  TMEGKREGAGIIP-RTVTDVIDLMDKGNANRTTAATAMNEHSSRSHSVFRIHF------- 91

Query: 137 IDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSL 196
                 +                 +  K+ +VDLAGSERID SG+EG  L E   IN SL
Sbjct: 92  ----GGKNALASAT-------EQPKVGKINLVDLAGSERIDFSGAEGSRLTETANINKSL 140

Query: 197 SSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGP 242
           S+LG  I+ALAE   H+P R+SKLTRLL+DS GG++RT ++  + P
Sbjct: 141 STLGNVISALAERDSHVPYRESKLTRLLQDSLGGNSRTLMVACISP 186

These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Length = 186

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	267
KOG4280	574	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0245	1221	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01373	337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	100.0
KOG0243	1041	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01370	338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	100.0
PLN03188	1320	kinesin-12 family protein; Provisional	100.0
KOG0240	607	consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	100.0
cd01368	345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	100.0
cd01364	352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	100.0
cd01365	356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	100.0
cd01371	333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	100.0
cd01369	325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	100.0
cd01376	319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	100.0
cd01375	334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	100.0
cd01372	341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	100.0
cd01374	321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	100.0
cd01367	322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	100.0
KOG0242	675	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01366	329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	100.0
PF00225	335	Kinesin: Kinesin motor domain; InterPro: IPR001752	100.0
smart00129	335	KISc Kinesin motor, catalytic domain. ATPase. Micr	100.0
cd00106	328	KISc Kinesin motor domain. This catalytic (head) d	100.0
KOG0246	676	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0241	1714	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0239	670	consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	100.0
KOG0247	809	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0244	913	consensus Kinesin-like protein [Cytoskeleton]	100.0
COG5059	568	KIP1 Kinesin-like protein [Cytoskeleton]	100.0
cd01363	186	Motor_domain Myosin and Kinesin motor domain. Thes	100.0
COG2804	500	PulE Type II secretory pathway, ATPase PulE/Tfp pi	94.64
COG0556	663	UvrB Helicase subunit of the DNA excision repair c	94.24
smart00053	240	DYNc Dynamin, GTPase. Large GTPases that mediate v	93.39
PRK06620	214	hypothetical protein; Validated	88.73
COG2805	353	PilT Tfp pilus assembly protein, pilus retraction	88.66
PF01935	229	DUF87: Domain of unknown function DUF87; InterPro:	88.63
PF13245	76	AAA_19: Part of AAA domain	88.19
COG1474	366	CDC6 Cdc6-related protein, AAA superfamily ATPase	88.12
PF05673	249	DUF815: Protein of unknown function (DUF815); Inte	86.72
PF00308	219	Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013	85.99
PRK06893	229	DNA replication initiation factor; Validated	85.91
cd00046	144	DEXDc DEAD-like helicases superfamily. A diverse f	85.62
PRK09087	226	hypothetical protein; Validated	85.4
PRK08727	233	hypothetical protein; Validated	85.22
smart00382	148	AAA ATPases associated with a variety of cellular	85.21
PRK08084	235	DNA replication initiation factor; Provisional	84.92
COG1125	309	OpuBA ABC-type proline/glycine betaine transport s	84.57
PRK05642	234	DNA replication initiation factor; Validated	83.12
PF13401	131	AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S	83.05
PF02456	369	Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR	82.79
cd01131	198	PilT Pilus retraction ATPase PilT. PilT is a nucle	82.62
PF13555	62	AAA_29: P-loop containing region of AAA domain	81.65
PF00448	196	SRP54: SRP54-type protein, GTPase domain; InterPro	81.13
PF00004	132	AAA: ATPase family associated with various cellula	80.84
KOG0926	1172	consensus DEAH-box RNA helicase [RNA processing an	80.83
KOG0989	346	consensus Replication factor C, subunit RFC4 [Repl	80.77
PF13086	236	AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV	80.64
KOG2543	438	consensus Origin recognition complex, subunit 5 [R	80.63

>KOG4280 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=1.3e-69  Score=492.94  Aligned_cols=244  Identities=48%  Similarity=0.668  Sum_probs=226.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCC----CeEEEEEEEEecCceeecCCCCC-CCcCcccCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTS----DSVEVSYLQLYMESIQDLLAPEK-VNIPINEDP   75 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~----~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~~   75 (267)
                      ||||||||||||||.|+   ++...|||||++++||..+.+..    +.|++||+|||||+|+|||+|.. ..+.+++++
T Consensus        90 FaYGQTGsGKTyTM~G~---~~~~~GiiPraf~~LF~~I~~~~~~~~f~vrvS~lEiYnE~i~DLL~~~~~~~l~lre~p  166 (574)
T KOG4280|consen   90 FAYGQTGSGKTYTMIGP---DPELRGLIPRAFEHLFRHIDERKEKTRFLVRVSYLEIYNESIRDLLSPVNPKGLELREDP  166 (574)
T ss_pred             EEeccCCCCCceEeeCC---ChhhCCchhHHHHHHHHHHHhccccceEEEEeehHHHHhHHHHHHhCccCcCCceeeEcC
Confidence            79999999999999876   37889999999999999997764    68999999999999999999977 589999999


Q ss_pred             CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439           76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN  155 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (267)
                      ..| ++|+|++++.|.+++|+..++..|..+|..+++.+|..|||||+||+|+|++....                  .+
T Consensus       167 ~~G-v~V~nlse~~v~s~~d~~~~l~~G~~nR~vgat~mn~~SsRSH~ift~~i~~~~~~------------------~~  227 (574)
T KOG4280|consen  167 KCG-VYVENLSEMDVESAEDAQQLLVVGLANRRVGATSMNEESSRSHAIFTIHIESSEKS------------------DG  227 (574)
T ss_pred             CCc-eEecCcceeecCCHHHHHHHHHHHHhhcchhhccCCcccccceEEEEEEEEeeccc------------------CC
Confidence            877 99999999999999999999999999999999999999999999999999883211                  11


Q ss_pred             CCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCchhhHhhHHhcCCCCeE
Q 024439          156 HVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       156 ~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~-~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                      .....+.|+|+||||||||+..++++.|.+++|+..||+||.+|++||.+|.+++. ||||||||||+||||+|||||+|
T Consensus       228 ~~~~~~~~rlnlvDLagsEr~~~tga~G~rlkEa~~IN~SLs~LG~vI~aLvd~~~~HIPYRdSkLT~LLqdSLGGN~kT  307 (574)
T KOG4280|consen  228 GLMSGRSSKLNLVDLAGSERQSKTGAEGERLKEATNINLSLSALGNVISALVDGSKTHIPYRDSKLTRLLQDSLGGNSKT  307 (574)
T ss_pred             CccccccceeeeeeccchhhhcccCccchhhhhhcccchhHHHHHHHHHHHhccccCCCCcchhHHHHHHHHHcCCCceE
Confidence            22345789999999999999999999999999999999999999999999999877 99999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      +||+||+|+..+++||++||+||+||+.|.|.
T Consensus       308 ~mianvsp~~~~~~ETlsTLrfA~Rak~I~nk  339 (574)
T KOG4280|consen  308 TMIANVSPSSDNYEETLSTLRFAQRAKAIKNK  339 (574)
T ss_pred             EEEEecCchhhhhHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999885

>KOG0245 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=3.2e-69  Score=503.15  Aligned_cols=246  Identities=37%  Similarity=0.584  Sum_probs=227.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCC-C-CCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLA-P-EKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~-~-~~~~~~i~~   73 (267)
                      ||||||||||||||.|  +.+++++|||||+|++||.++...     .++|.+||+|||||+|+|||+ | .+.++++++
T Consensus        92 FAYGQTGSGKSYTMMG--~~~~~e~GIIPrlCEeLF~ri~~nq~~~~sy~VevSymEIYcErVrDLL~~p~~kg~LRVRE  169 (1221)
T KOG0245|consen   92 FAYGQTGSGKSYTMMG--FQEPDEPGIIPRLCEELFSRIADNQSQQMSYSVEVSYMEIYCERVRDLLNAPKSKGGLRVRE  169 (1221)
T ss_pred             EEeccCCCCcceeeec--cCCCCCCCchhHHHHHHHHHHhhcccccceEEEEEeehhHHHHHHHHHhhCCCCCCCceeec
Confidence            7999999999999977  557789999999999999998654     468999999999999999999 5 456899999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      +|..| .||.+|+...|.|+.|+..++..|++.|++++|.+|..|||||+||+|.+.|..+...+.              
T Consensus       170 HP~lG-PYVedLS~~aV~Sy~dI~~~md~GNkqRTtAATnMNdtSSRSHaVFtIvftQk~~~~~~~--------------  234 (1221)
T KOG0245|consen  170 HPILG-PYVEDLSKLAVTSYADIQDLMDEGNKQRTTAATNMNDTSSRSHAVFTIVFTQKKHDQDTG--------------  234 (1221)
T ss_pred             cCccC-hhHhHhhhcccccHHHHHHHHHhcchhhhhhhhccccccccceeEEEEEEEeeeccccCC--------------
Confidence            99999 669999999999999999999999999999999999999999999999999987754322              


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-------CCCCCCCchhhHhhHH
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-------PHIPTRDSKLTRLLRD  226 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-------~~ipyr~SkLT~lL~~  226 (267)
                         ....++|+|.+||||||||...++..|.+++|+..||+||.+|++||.||++.+       .+||||||.||+||++
T Consensus       235 ---l~sek~SKIsLVDLAGSERasstGa~G~RLKEGa~INKSLtTLGkVISALAe~~~~k~~ks~fIPYRDSVLTWLLkE  311 (1221)
T KOG0245|consen  235 ---LDSEKVSKISLVDLAGSERASSTGANGDRLKEGANINKSLTTLGKVISALAESQKGKKKKSDFIPYRDSVLTWLLKE  311 (1221)
T ss_pred             ---CcceeeeeeeEEeccCcccccccCCCccchhcccccchHHHHHHHHHHHHHHHhccCCCCCccccchHHHHHHHHHH
Confidence               224578999999999999999999999999999999999999999999999743       3899999999999999


Q ss_pred             hcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          227 SFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       227 ~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      .||||++|.||+++||++.||+|||+||+||+||++|+|.
T Consensus       312 nLGGNSKTaMIAAlSPAdiNyeETLSTLRYAdRAK~Iv~~  351 (1221)
T KOG0245|consen  312 NLGGNSKTAMIAALSPADINYEETLSTLRYADRAKQIVNN  351 (1221)
T ss_pred             hcCCcchhhhhhccChhhcChHHHHHHHHHhhHhhhhhcc
Confidence            9999999999999999999999999999999999999985

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup

Probab=100.00  E-value=6.6e-67  Score=462.67  Aligned_cols=243  Identities=43%  Similarity=0.597  Sum_probs=219.9

Q ss_pred             CcccCCccCccccccccCCC----CCCCcChHHHHHHHHHHhcccC--------CCeEEEEEEEEecCceeecCCCCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKD----DASERGIMVRALEDIISSMSVT--------SDSVEVSYLQLYMESIQDLLAPEKVN   68 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~----~~~~~Gli~r~~~~lf~~~~~~--------~~~v~~S~~EIy~e~v~DLL~~~~~~   68 (267)
                      ||||||||||||||+|....    ...++|||||++++||..+...        .+.|.+||+|||||+++|||++....
T Consensus        79 ~aYGqTGSGKTyTm~G~~~~~~~~~~~~~Giipr~~~~Lf~~i~~~~~~~~~~~~~~v~~S~~EIyne~v~DLL~~~~~~  158 (337)
T cd01373          79 FAYGQTGSGKTYTMMGPSSSDDESPHGLQGVIPRIFEYLFSLIQREEEKRGDGLKFLCKCSFLEIYNEQITDLLDPTSRN  158 (337)
T ss_pred             EEeCCCCCCceEEecCCCCccccccccCCCHHHHHHHHHHHHHHhhhhhcccCceEEEEEEEEeecCCEeeeCCCCCCCC
Confidence            79999999999999885432    2357899999999999877532        45899999999999999999998889


Q ss_pred             cCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccccc
Q 024439           69 IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTR  148 (267)
Q Consensus        69 ~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~  148 (267)
                      +.+++++..| +++.|++++.|.|++|+.++|..|..+|..+++..|..|||||+||+|+|.+....             
T Consensus       159 l~i~e~~~~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~-------------  224 (337)
T cd01373         159 LKIREDIKKG-VYVENLTEEYVSSYEDVYQVLLKGLSNRKVAATSMNSESSRSHAVFTCTIESWEKK-------------  224 (337)
T ss_pred             ceEEECCCCC-EEeCCCEEEEeCCHHHHHHHHHHHHhccCcccCcCCCCCCCccEEEEEEEEEeecC-------------
Confidence            9999998766 89999999999999999999999999999999999999999999999999765321             


Q ss_pred             ccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCchhhHhh
Q 024439          149 TELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE----NSPHIPTRDSKLTRLL  224 (267)
Q Consensus       149 ~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~----~~~~ipyr~SkLT~lL  224 (267)
                            +.......|+|+||||||||+..+.+..+.+.+|+..||+||.+|++||.+|++    +..|+|||+||||+||
T Consensus       225 ------~~~~~~~~s~l~~VDLAGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~aL~~~~~~~~~~ipyR~SkLT~lL  298 (337)
T cd01373         225 ------ASSTNIRTSRLNLVDLAGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAHGKQRHVPYRDSKLTFLL  298 (337)
T ss_pred             ------CCCCcEEEEEEEEEECCCCCcccccCCccHhhhhhccccHHHHHHHHHHHHHHhhccCCCCccCCcccHHHHHH
Confidence                  111245679999999999999999999999999999999999999999999985    3579999999999999


Q ss_pred             HHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          225 RDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       225 ~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      +|+|||+|+|+||+||+|...+++||++||+||+||++|
T Consensus       299 ~dsLggns~t~~I~~vsP~~~~~~eTl~TL~fa~rak~I  337 (337)
T cd01373         299 RDSLGGNAKTTIIANVSPSSKCFGETLSTLKFAQRAKLI  337 (337)
T ss_pred             HHhcCCCceEEEEEEECCCcccHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999986

Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=8.1e-68  Score=500.82  Aligned_cols=247  Identities=43%  Similarity=0.617  Sum_probs=226.6

Q ss_pred             CcccCCccCccccccc----cCCCCCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCCCC---CcCc
Q 024439            1 MAYGQTGTGKTYTLGR----LGKDDASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPEKV---NIPI   71 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G----~~~~~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~~~---~~~i   71 (267)
                      |||||||+||||||+|    .+++.+++.|||||++.+||..+...  .|.|.|||+|+|||+++|||++...   ...+
T Consensus       133 FAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~~~~EYsvKVSfLELYNEEl~DLLa~~~~~~~~~~~  212 (1041)
T KOG0243|consen  133 FAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLEAQGAEYSVKVSFLELYNEELTDLLASEDTSDKKLRI  212 (1041)
T ss_pred             EEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHHhcCCeEEEEEEehhhhhHHHHHhcCCcccccccccc
Confidence            7999999999999988    24556788999999999999999776  4799999999999999999998643   3555


Q ss_pred             ccCC----CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccc
Q 024439           72 NEDP----KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDT  147 (267)
Q Consensus        72 ~~~~----~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~  147 (267)
                      .+++    ..|.+.++|+.++.|.++.|++++|.+|..+|++++|.+|..|||||+||+|+|......            
T Consensus       213 k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t------------  280 (1041)
T KOG0243|consen  213 KDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENT------------  280 (1041)
T ss_pred             ccCCcccCCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEecCC------------
Confidence            5555    567799999999999999999999999999999999999999999999999999765331            


Q ss_pred             cccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh
Q 024439          148 RTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       148 ~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~  227 (267)
                            ..+.+.+++|+|.+|||||||-..++++.+.|.+|+..||+||.+|++||.||.++..|||||+|||||||||+
T Consensus       281 ------~~geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDS  354 (1041)
T KOG0243|consen  281 ------PEGEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDS  354 (1041)
T ss_pred             ------CcchhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHH
Confidence                  22445788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      |||.++|++|+||||+..+.+||++||+||.||+.|+|
T Consensus       355 LGGkTKT~iIATiSPa~~~lEETlSTLEYA~RAKnIkN  392 (1041)
T KOG0243|consen  355 LGGKTKTCIIATISPAKHNLEETLSTLEYAHRAKNIKN  392 (1041)
T ss_pred             hCCCceeEEEEEeCCCcccHHHHHHHHHHHHHhhhccC
Confidence            99999999999999999999999999999999999998

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup

Probab=100.00  E-value=5e-66  Score=457.24  Aligned_cols=240  Identities=40%  Similarity=0.616  Sum_probs=221.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|    +..++|||||++++||+.+...    .+.|.+||+|||+|+|+|||++....+.+++++.
T Consensus        92 ~ayGqtGSGKTyTm~G----~~~~~Giipr~~~~LF~~i~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~l~i~ed~~  167 (338)
T cd01370          92 FAYGATGAGKTHTMLG----TDSDPGLMVLTMKDLFDKIEERKDDKEFEVSLSYLEIYNETIRDLLSPSSGPLELREDPN  167 (338)
T ss_pred             EeeCCCCCCCeEEEcC----CCCCCchHHHHHHHHHHhhhhcccCceEEEEEEEEEEECCEEEECCCCCCCCceEEEcCC
Confidence            7999999999999966    3467899999999999988654    3589999999999999999999888999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                       |.+++.|+++++|.|++|++++|+.|..+|....+.+|..|||||+||+|++.+.....                  +.
T Consensus       168 -~~~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~------------------~~  228 (338)
T cd01370         168 -QGIVVAGLTEHQPKSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKDRTA------------------SI  228 (338)
T ss_pred             -CCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccccccCccCcceEEEEEEEEEEecCC------------------CC
Confidence             55999999999999999999999999999999999999999999999999998764321                  11


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHhhHHhcCCCCe
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                      ......|+|+||||||+|+..+....+.+.+|+..||+||.+|++||.+|++++   .|+|||+||||+||+|+|||+|+
T Consensus       229 ~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~~L~~~~~~~~~ipyR~SkLT~lL~d~Lggn~~  308 (338)
T cd01370         229 NQQVRIGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDGKKKNKHIPYRDSKLTRLLKDSLGGNCK  308 (338)
T ss_pred             CCcEEEEEEEEEECCCCccccccCCCCccccccchhhHHHHHHHHHHHHHHhccCCCCcCCCcCCHHHHHHHHhcCCCCe
Confidence            234678999999999999999999999999999999999999999999999987   89999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      ++||+||+|...+++||++||+||+||++|
T Consensus       309 t~~I~~vsp~~~~~~eTl~TL~fa~ra~~I  338 (338)
T cd01370         309 TVMIANISPSSSHYEETHNTLKYANRAKNI  338 (338)
T ss_pred             EEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999986

The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec

>PLN03188 kinesin-12 family protein; Provisional

Probab=100.00  E-value=2.7e-65  Score=488.52  Aligned_cols=248  Identities=38%  Similarity=0.578  Sum_probs=223.4

Q ss_pred             CcccCCccCccccccccCCC------CCCCcChHHHHHHHHHHhccc---------CCCeEEEEEEEEecCceeecCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKD------DASERGIMVRALEDIISSMSV---------TSDSVEVSYLQLYMESIQDLLAPE   65 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~------~~~~~Gli~r~~~~lf~~~~~---------~~~~v~~S~~EIy~e~v~DLL~~~   65 (267)
                      ||||||||||||||+|...+      ...++|||||++++||..+..         ..+.|++||+|||||+|+|||++.
T Consensus       170 FAYGQTGSGKTYTM~G~~~~~~de~~s~~e~GIIPRaledLF~~I~e~q~k~~d~~~~y~V~vSyLEIYNEkI~DLLsp~  249 (1320)
T PLN03188        170 FAYGQTGSGKTYTMWGPANGLLEEHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIYNEQITDLLDPS  249 (1320)
T ss_pred             ecCCCCCCCCCEeeCCCCCcccccccccccCCchHHHHHHHHHHHHhhhhhccccccceEEEEEEEeeecCcceeccccc
Confidence            79999999999999885322      346789999999999998753         246899999999999999999998


Q ss_pred             CCCcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccc
Q 024439           66 KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEK  145 (267)
Q Consensus        66 ~~~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~  145 (267)
                      ..++.+++++..| ++|.|++++.|.|++|+.++|..|..+|..+.|.+|..|||||+||+|+|.+.....         
T Consensus       250 ~k~L~IRED~kgG-v~VeGLTEv~V~S~ED~l~LL~~G~~nR~tasT~mN~~SSRSHaIFtI~Ves~~k~~---------  319 (1320)
T PLN03188        250 QKNLQIREDVKSG-VYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSV---------  319 (1320)
T ss_pred             cCCceEEEcCCCC-eEeCCCeEEeCCCHHHHHHHHHHHhccceeccCCCCCccCCCceeEEEEEEEeeccc---------
Confidence            8899999998766 899999999999999999999999999999999999999999999999997643211         


Q ss_pred             cccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCCCchh
Q 024439          146 DTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE-----NSPHIPTRDSKL  220 (267)
Q Consensus       146 ~~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~-----~~~~ipyr~SkL  220 (267)
                              .++......|+|+||||||||+..+.+..+.+++|+..||+||.+|++||.+|++     +..|||||+|||
T Consensus       320 --------~dg~ss~r~SkLnLVDLAGSER~kkTga~G~RLkEA~~INKSLsaLGnVI~ALae~Sq~gk~~HIPYRDSKL  391 (1320)
T PLN03188        320 --------ADGLSSFKTSRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQTGKQRHIPYRDSRL  391 (1320)
T ss_pred             --------CCCCcceEEEEEEEEECCCchhccccCcccHHHHHHHHHhHHHHHHHHHHHHHHHhhccCCCCcCCCCcchH
Confidence                    1112345789999999999999999999999999999999999999999999986     346999999999


Q ss_pred             hHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          221 TRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       221 T~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+|+|||||+|+||+||+|...+++||++||+||+||++|+|.
T Consensus       392 TrLLQDSLGGNSKTvMIa~VSPs~~~~eETLSTLrFAsRAK~IKNk  437 (1320)
T PLN03188        392 TFLLQESLGGNAKLAMVCAISPSQSCKSETFSTLRFAQRAKAIKNK  437 (1320)
T ss_pred             HHHHHHhcCCCceEEEEEecCCchhhHHHHHHHHHHHHHHhhcCcc
Confidence            9999999999999999999999999999999999999999999985

>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]

Probab=100.00  E-value=4.4e-66  Score=459.51  Aligned_cols=244  Identities=49%  Similarity=0.723  Sum_probs=229.1

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCC----CeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTS----DSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~----~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||.|.+. ++...|||||++++||.++...+    ++|.|||+|||+|+++|||+|.+.++.+++| +
T Consensus        87 faYGqT~sGKTytm~G~~~-d~~~~GIipRi~~diF~~Iys~~~n~efhVkVsy~EIYmEKi~DLL~~~k~nlsvheD-K  164 (607)
T KOG0240|consen   87 FAYGQTGSGKTYTMEGIGH-DPEEMGIIPRILNDIFDHIYSMEENLEFHVKVSYFEIYMEKIRDLLDPEKTNLSVHED-K  164 (607)
T ss_pred             EEecCCCCCcceeecccCC-ChhhcCcHHHHHHHHHHHHhcCcccceEEEEEEeehhhhhHHHHHhCcccCCceeecc-c
Confidence            7999999999999988754 56677999999999999997754    5799999999999999999999999999999 6


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      +..++++|+++..|.++++++.+++.|..+|..+.+.+|.+|||||.||+|+|.|......                   
T Consensus       165 ~~v~~vkG~t~~~v~s~d~v~~~i~~g~~nr~va~t~mn~~sSRSHsIF~i~VkQ~n~e~~-------------------  225 (607)
T KOG0240|consen  165 NRVPYVKGVTERFVSSPDEVLDVIDEGKSNRHVAVTNMNEHSSRSHSIFLIHVKQENVEDK-------------------  225 (607)
T ss_pred             CCCceecCceeEEecCHHHHHHHHhcccccchhhhccccccccccceEEEEEEEeccccch-------------------
Confidence            6679999999999999999999999999999999999999999999999999999754322                   


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                        ..+.|+|++|||||+|+..+++..|.-+.|++.||+||.+|++||++|+++ ..|||||||||||+|+|+|||||+|.
T Consensus       226 --~~~~gkLyLVDLaGSEkvsKtga~g~vleEaK~INkSLsaLgnvI~aLa~g~~shipYRDSKLTRILqdSLGGNsRTt  303 (607)
T KOG0240|consen  226 --RKLSGKLYLVDLAGSEKVSKTGAEGAVLEEAKNINKSLSALGNVINALAEGPKSHIPYRDSKLTRILQDSLGGNSRTT  303 (607)
T ss_pred             --hhccccEEEEEcccccccCCCCccchhHHHHhhhhhhHHHHHHHHHHHhcCCCCCCcchhhHHHHHHHHHhCCCcceE
Confidence              347899999999999999999999999999999999999999999999998 78999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhccC
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISVV  267 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~~  267 (267)
                      +|.|++|+.-+..||.+||+|++||+.|+|.|
T Consensus       304 lIi~csPss~n~~ET~STl~fg~rak~ikN~v  335 (607)
T KOG0240|consen  304 LIICCSPSSLNEAETKSTLRFGNRAKTIKNTV  335 (607)
T ss_pred             EEEecCCccccccccccchhhccccccccchh
Confidence            99999999999999999999999999999975

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup

Probab=100.00  E-value=1.5e-64  Score=448.76  Aligned_cols=241  Identities=36%  Similarity=0.558  Sum_probs=217.5

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCCCeEEEEEEEEecCceeecCCCCCC------CcCcccC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKV------NIPINED   74 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~------~~~i~~~   74 (267)
                      ||||||||||||||+|    +..++|||||++++||+.+..  +.|.+||+|||||+|+|||++...      .+.++++
T Consensus        93 ~aYGqtGSGKTyTm~G----~~~~~Gli~r~~~~lF~~~~~--~~v~~S~~EIyne~v~DLL~~~~~~~~~~~~l~i~ed  166 (345)
T cd01368          93 FTYGVTNSGKTYTMQG----SPGDGGILPRSLDVIFNSIGG--YSVFVSYVEIYNNYIYDLLEDSPSSTKKRQSLRLRED  166 (345)
T ss_pred             EEeCCCCCCCeEEecC----CCCCCchHHHHHHHHHHHHHh--eeEEEEEEEEeCCEeEeCCCCccccccCCCceEEEEC
Confidence            6999999999999966    447899999999999999876  999999999999999999998543      5888998


Q ss_pred             CCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCC
Q 024439           75 PKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGD  154 (267)
Q Consensus        75 ~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~  154 (267)
                      +. |.+++.|++++.|.|++|+.++|+.|..+|..+.+..|..|||||+||+|++.+........             ..
T Consensus       167 ~~-~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~N~~SSRSH~i~~i~v~~~~~~~~~~-------------~~  232 (345)
T cd01368         167 HN-GNMYVAGLTEVEVSSTEEAREVFKRGQKNRRVAGTKLNRESSRSHSVFTIKLVQAPGDSDGD-------------VD  232 (345)
T ss_pred             CC-CCEEecCCEEEEeCCHHHHHHHHHHhhccceeccccCcCCCCCceEEEEEEEEEeccCcccc-------------cc
Confidence            86 66999999999999999999999999999999999999999999999999998764321100             01


Q ss_pred             CCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc------CCCCCCCCCchhhHhhHHhc
Q 024439          155 NHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------NSPHIPTRDSKLTRLLRDSF  228 (267)
Q Consensus       155 ~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~------~~~~ipyr~SkLT~lL~~~l  228 (267)
                      ...+.+..|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|++      +..|||||+||||+||+|+|
T Consensus       233 ~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~aL~~vi~aL~~~~~~~~~~~~iPyR~SkLT~lL~~~l  312 (345)
T cd01368         233 QDKDQITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGKCIEVLRENQLSGSTNKMVPYRDSKLTHLFQNYF  312 (345)
T ss_pred             cCCCceEEEEEEEEecccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHhhhcccCCCCcCCCcCCHHHHHHHHhc
Confidence            122456789999999999999999999999999999999999999999999987      45799999999999999999


Q ss_pred             CCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439          229 GGSARTSLIITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       229 ~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      +|+++|+||+||+|...+++||++||+||++|+
T Consensus       313 ~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~a~  345 (345)
T cd01368         313 DGEGKARMIVNVNPCASDYDETLHVMKFSAIAQ  345 (345)
T ss_pred             CCCCeEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999985

Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division

Probab=100.00  E-value=1.3e-63  Score=444.94  Aligned_cols=248  Identities=44%  Similarity=0.614  Sum_probs=224.3

Q ss_pred             CcccCCccCccccccccCCC-------CCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCC---CCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKD-------DASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPE---KVN   68 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~-------~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~---~~~   68 (267)
                      ||||++||||||||+|....       ..+++|||||++++||+.+...  .+.|++||+|||+|+++|||++.   ...
T Consensus        86 ~ayG~tgSGKTyTl~G~~~~~~~~~~~~~~~~Glipr~~~~Lf~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~  165 (352)
T cd01364          86 FAYGQTGTGKTYTMEGDRTDNKGSTWELSPHAGIIPRALYQLFEKLESQNTEYSVKVSYLELYNEELFDLLSSESDLNKP  165 (352)
T ss_pred             EECCCCCCCCcEEecCCCcccccccccccccCCchHHHHHHHHHHHHhccceeEEEEEEEEeeCCeeeeCCCCccccCcc
Confidence            69999999999999885332       2457899999999999988763  56899999999999999999986   567


Q ss_pred             cCcccCC-CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccc
Q 024439           69 IPINEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDT  147 (267)
Q Consensus        69 ~~i~~~~-~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~  147 (267)
                      +.+++++ ..+.+++.|+++++|.|++|+.++|+.|.++|..+.+..|..|||||+||+|++.+.....           
T Consensus       166 l~i~e~~~~~~g~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRSH~i~~i~i~~~~~~~-----------  234 (352)
T cd01364         166 LRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTAATLMNDQSSRSHSIFSITIHIKETTI-----------  234 (352)
T ss_pred             ceEEeccCcCCCEEeCCcEEEEeCCHHHHHHHHHHHhhhcccccCcCCCCCCCCceEEEEEEEEeccCC-----------
Confidence            8899985 3455999999999999999999999999999999999999999999999999998763321           


Q ss_pred             cccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh
Q 024439          148 RTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       148 ~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~  227 (267)
                             ........|+|+||||||+|+.++.+..+.+.+|+..||+||.+|++||.+|+.++.++|||+|+||+||+|+
T Consensus       235 -------~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~~~vpyR~S~LT~lL~~~  307 (352)
T cd01364         235 -------SGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGNINQSLLTLGRVINALVEKSPHIPYRESKLTRLLQDS  307 (352)
T ss_pred             -------CCCccEEEEEEEEEECCCccccccccCcchhhHHHhhhhHHHHHHHHHHHHHHcCCCCCCCcccHHHHHHHHh
Confidence                   1123456799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |||+|+++||+||+|...+++||++||+||+|+++|+|.
T Consensus       308 Lgg~s~t~~I~~vsp~~~~~~eTl~TL~~a~~~~~i~n~  346 (352)
T cd01364         308 LGGRTKTSIIATISPASINLEETLSTLEYAHRAKNIKNK  346 (352)
T ss_pred             cCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCc
Confidence            999999999999999999999999999999999999874

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins

Probab=100.00  E-value=2.8e-63  Score=443.04  Aligned_cols=244  Identities=39%  Similarity=0.620  Sum_probs=221.4

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCCC---CCcCcc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPEK---VNIPIN   72 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~~---~~~~i~   72 (267)
                      ||||+|||||||||+|    +..++|||||++++||+.+...     .+.|++||+|||+|+|+|||++..   ..+.++
T Consensus        93 ~ayGqtGSGKT~Tm~G----~~~~~Gli~r~~~~Lf~~~~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~l~i~  168 (356)
T cd01365          93 FAYGQTGSGKSYTMMG----YKEEKGIIPRLCEELFQRIESKKEQNLSYEVEVSYMEIYNEKVRDLLNPKKKNKGNLKVR  168 (356)
T ss_pred             EEecCCCCCCeEEecC----CCCCCchHHHHHHHHHHHHhhccccCceEEEEEEEEEEECCeeeeCCCCCccCCcCceEE
Confidence            6999999999999966    3447899999999999988654     358999999999999999999874   578899


Q ss_pred             cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439           73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP  152 (267)
Q Consensus        73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~  152 (267)
                      +++..| ++++|+++++|.|++|+..+|+.|.++|..+.+..|..|||||+||+|++.+......               
T Consensus       169 ~~~~~g-~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~l~v~~~~~~~~---------------  232 (356)
T cd01365         169 EHPVLG-PYVEDLSKVAVTSYEDIQNLLEEGNKSRTTASTNMNDTSSRSHAVFTIVLTQKKLDKE---------------  232 (356)
T ss_pred             ECCCCC-EEeCCCEEEEeCCHHHHHHHHHHHHhcccccCCCCCCCcCCceEEEEEEEEEEecccC---------------
Confidence            988766 8899999999999999999999999999999999999999999999999987644211               


Q ss_pred             CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCCCCCchhhHhh
Q 024439          153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN--------SPHIPTRDSKLTRLL  224 (267)
Q Consensus       153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~--------~~~ipyr~SkLT~lL  224 (267)
                        ........|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|+++        +.++|||+||||+||
T Consensus       233 --~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~E~~~IN~SL~aL~~vi~~l~~~~~~~~~~~~~~ipyR~SkLT~lL  310 (356)
T cd01365         233 --TDLTTEKVSKISLVDLAGSERASSTGAEGDRLKEGSNINKSLTTLGKVISALADNSSAKSKKKSSFIPYRDSVLTWLL  310 (356)
T ss_pred             --CCCCceEEEEEEeeecccccccccccccchhhHHHHHHhHHHHHHHHHHHHHHhcccccccCCCCcCCCcCcHHHHHH
Confidence              1123457899999999999999999999999999999999999999999999874        469999999999999


Q ss_pred             HHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          225 RDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       225 ~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      +|+|+|+++++||+||+|...+++||++||+||+|+++|+|.
T Consensus       311 ~~~lgg~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~~i~~~  352 (356)
T cd01365         311 KENLGGNSKTAMIATISPADINYEETLSTLRYADRAKKIVNV  352 (356)
T ss_pred             HHhcCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCc
Confidence            999999999999999999999999999999999999999985

KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins

Probab=100.00  E-value=3.3e-63  Score=438.86  Aligned_cols=243  Identities=40%  Similarity=0.629  Sum_probs=221.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC-CCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK-VNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~~~   76 (267)
                      ||||++||||||||+|. .....++|||||++++||+.+...   .+.|.+||+|||+|+++|||++.. ..+.+++++.
T Consensus        86 ~ayG~tgSGKTyTm~G~-~~~~~~~Glipr~~~~Lf~~~~~~~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~~l~i~~~~~  164 (333)
T cd01371          86 FAYGQTGTGKTFTMEGV-REPPELRGIIPNSFAHIFGHIAKAENVQFLVRVSYLEIYNEEVRDLLGKDQKKKLELKERPD  164 (333)
T ss_pred             EecCCCCCCCcEeecCC-CCcccccchHHHHHHHHHHHHhhccCccEEEEEEEEEeeCCeeeeCCCCCCCCceeEEEcCC
Confidence            79999999999999874 234568999999999999988654   468999999999999999999875 5789999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|+++++|.|++|+..+|..|.++|....+..|..|||||+||+|+|.+.....                  ..
T Consensus       165 ~~-~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~------------------~~  225 (333)
T cd01371         165 RG-VYVKDLSMFVVKNAEEMDKLMTLGNKNRSVGATNMNEDSSRSHSIFTITIECSEKGE------------------DG  225 (333)
T ss_pred             CC-EEeCCCEEEEeCCHHHHHHHHHHHHhhCccccccccCCCCCCcEEEEEEEEEEeccC------------------CC
Confidence            55 889999999999999999999999999999999999999999999999998764321                  12


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~-~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      ...+..|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|++++. |+|||+|+||++|+|+|+|+++++
T Consensus       226 ~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~iN~sL~~L~~vi~al~~~~~~~ipyR~SkLT~lL~~~l~g~s~t~  305 (333)
T cd01371         226 ENHIRVGKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNSKTV  305 (333)
T ss_pred             CCcEEEEEEEEEECCCCCcccccCCchhhhHhHhhhhhHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCceEE
Confidence            2346789999999999999999988899999999999999999999999999876 999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      ||+||+|...+++||++||+||+|+|+|
T Consensus       306 ~I~~vsP~~~~~~eTl~TL~fa~r~r~I  333 (333)
T cd01371         306 MCANIGPADYNYDETLSTLRYANRAKNI  333 (333)
T ss_pred             EEEEeCCccccHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999986

Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup

Probab=100.00  E-value=5.1e-63  Score=436.79  Aligned_cols=240  Identities=47%  Similarity=0.708  Sum_probs=221.0

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||++||||||||+|.. ....++|||||++++||+.+...    .+.|.+||+|||+|+++|||++....+.+++++.
T Consensus        81 ~ayG~tgSGKT~Tm~G~~-~~~~~~Giipr~~~~Lf~~~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~l~i~~~~~  159 (325)
T cd01369          81 FAYGQTGSGKTYTMEGPP-GDPELKGIIPRIVHDIFEHISSMDENLEFHVKVSYLEIYMEKIRDLLDVSKDNLQVHEDKN  159 (325)
T ss_pred             EEeCCCCCCceEEecCCC-CccccCChHHHHHHHHHHHHhhccCCceEEEEEEEEEEECCChhhcccCccCCceEEEcCC
Confidence            699999999999998743 23558899999999999988654    3589999999999999999999888899999986


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| ++++|+++++|.|++|+..+|+.|.++|....+..|..|||||+||+|+|.+....                     
T Consensus       160 ~~-~~v~gl~~~~v~s~~e~~~~i~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~---------------------  217 (325)
T cd01369         160 RG-VYVKGLTERFVSSPEEVLEVINEGKSNRAVASTNMNEESSRSHSIFLITLKQENVE---------------------  217 (325)
T ss_pred             CC-EEEcCCEEEEcCCHHHHHHHHHHHHhhcccccCcCCCccccccEEEEEEEEEEecC---------------------
Confidence            55 89999999999999999999999999999999999999999999999999875321                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      .+....|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|++++ .++|||+|+||+||+|+|+|+|+++
T Consensus       218 ~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~~vpyR~S~LT~lL~~~L~g~s~t~  297 (325)
T cd01369         218 TGSKKRGKLFLVDLAGSEKVSKTGAEGQTLEEAKKINKSLSALGNVINALTDGKSTHIPYRDSKLTRILQDSLGGNSRTT  297 (325)
T ss_pred             CCCEEEEEEEEEECCCCCcccccCCcchhHHHHHHHhHHHHHHHHHHHHHHcCCCCcCCCccCHHHHHHHHhcCCCCeEE
Confidence            123578999999999999999999999999999999999999999999999987 8999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      ||+||+|...+++||++||+||+|+++|
T Consensus       298 ~I~~vsp~~~~~~eTl~TL~~a~r~~~i  325 (325)
T cd01369         298 LIICCSPSSYNESETLSTLRFGARAKTI  325 (325)
T ss_pred             EEEEeCCccccHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999986

Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup

Probab=100.00  E-value=3.8e-63  Score=436.02  Aligned_cols=233  Identities=38%  Similarity=0.589  Sum_probs=217.7

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCCCCCcCcccCCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTG   78 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~~g   78 (267)
                      ||||++||||||||+|    +..++|||||++++||+.+...  .+.|.+||+|||+|+++|||++....+.+++++. |
T Consensus        85 ~ayG~tgSGKTyTm~G----~~~~~Glipr~~~~Lf~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~l~i~~~~~-~  159 (319)
T cd01376          85 FAYGSTGAGKTHTMLG----DPNEPGLIPRTLSDLLRMGRKQAWTGAFSMSYYEIYNEKVYDLLEPAKKELPIREDKD-G  159 (319)
T ss_pred             EEECCCCCCCcEEEeC----CcCccchHHHHHHHHHHHHhhccccceEEEEEEEEECCEeeEccCCCCCCceEEEcCC-C
Confidence            6999999999999966    3458899999999999987665  5789999999999999999999888899999875 5


Q ss_pred             CccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCCC
Q 024439           79 EVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVP  158 (267)
Q Consensus        79 ~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (267)
                      .+++.|+++++|.|++|+.+++..|.++|....+..|..|||||+||+|++.+....                       
T Consensus       160 ~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~-----------------------  216 (319)
T cd01376         160 NILIVGLTSKPIKSMAEFEEAYIPASKNRTVAATKLNDNSSRSHAVLRIKVTQPASN-----------------------  216 (319)
T ss_pred             CEEeeCCEEEEeCCHHHHHHHHHHHHhhhccccCcCCCccCCCeEEEEEEEEEECCC-----------------------
Confidence            689999999999999999999999999999999999999999999999999876321                       


Q ss_pred             ceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEEEE
Q 024439          159 LVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLII  238 (267)
Q Consensus       159 ~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~I~  238 (267)
                      ....|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|+.+..++|||+|+||++|+|+|+|+|+|+||+
T Consensus       217 ~~~~s~l~~VDLAGsE~~~~~~~~g~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~ipyr~S~LT~lL~~~L~g~s~t~~i~  296 (319)
T cd01376         217 IQLEGKLNLIDLAGSEDNRRTGNEGIRLKESAAINSSLFVLSKVVDALNKGLPRIPYRESKLTRLLQDSLGGGSRCIMVA  296 (319)
T ss_pred             ceEEEEEEEEECCCCCcccccCCccchhhhhhhhhhhHHHHHHHHHHHhcCCCcCCCccCHHHHHHHHhcCCCccEEEEE
Confidence            24689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCChHHHHHHhHHHHHhh
Q 024439          239 TVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       239 ~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      ||+|...+++||++||+||+|++
T Consensus       297 ~vsp~~~~~~eTl~TL~fa~r~~  319 (319)
T cd01376         297 NIAPERSFYQDTLSTLNFASRSK  319 (319)
T ss_pred             EeCCchhhHHHHHHHHHHHHhhC
Confidence            99999999999999999999986

Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling

Probab=100.00  E-value=6.1e-63  Score=437.06  Aligned_cols=240  Identities=42%  Similarity=0.634  Sum_probs=218.5

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC------CCcCc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK------VNIPI   71 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~------~~~~i   71 (267)
                      ||||++||||||||+|.. .+..++|||||++++||+.++..   .+.|++||+|||+|+++|||++..      ..+.+
T Consensus        85 ~ayG~tgSGKTyTm~G~~-~~~~~~Glipr~~~~lf~~~~~~~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~~~~~~~l~i  163 (334)
T cd01375          85 FAYGQTGAGKTFTMTGGT-ESYKDRGLIPRALEQVFREVAMRATKTYTVHVSYLEIYNEQLYDLLGDTPEALESLPAVTI  163 (334)
T ss_pred             eeecCCCCCCeEEccCCC-CcccCCchHHHHHHHHHHHHHhccCcceEEEEEEEEEECCEeecCCCCCccccccCCceEE
Confidence            799999999999998853 24567999999999999988654   468999999999999999999874      56888


Q ss_pred             ccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccC
Q 024439           72 NEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTEL  151 (267)
Q Consensus        72 ~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~  151 (267)
                      ++++. +.++++|+++++|.+++|++.+|..|..+|....+..|..|||||+||+|+|.+....                
T Consensus       164 ~e~~~-~~~~v~gl~~~~v~s~~e~~~~~~~g~~~R~~~~t~~n~~sSRSH~i~~l~v~~~~~~----------------  226 (334)
T cd01375         164 LEDSE-QNIHVKGLSLHSATTEEEALNLLFLGETNRTIAETSMNQASSRSHCIFTIHLESRSRE----------------  226 (334)
T ss_pred             EEcCC-CCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccCcCcCCcCcCeEEEEEEEEEEecC----------------
Confidence            88886 4599999999999999999999999999999999999999999999999999886332                


Q ss_pred             CCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCC
Q 024439          152 PGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGG  230 (267)
Q Consensus       152 ~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g  230 (267)
                         +.......|+|+||||||+|+..+.+..+...+|+..||+||.+|++||.+|++++ .++|||+|+||++|+|+|+|
T Consensus       227 ---~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~e~~~iN~SL~~L~~vi~~l~~~~~~~ipyRdSkLT~lL~d~Lgg  303 (334)
T cd01375         227 ---AGSEVVRLSKLNLVDLAGSERVSKTGVSGQVLKEAKYINKSLSFLEQVINALSEKARTHVPYRNSKLTHVLRDSLGG  303 (334)
T ss_pred             ---CCCCceEEEEEEEEECCCCCccccccCchhhhhhhhhhhhhHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhcCC
Confidence               11224578999999999999999988889999999999999999999999999988 89999999999999999999


Q ss_pred             CCeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439          231 SARTSLIITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      +|+++||+||+|...+++||++||+||+|++
T Consensus       304 ~~~t~~I~~vsp~~~~~~eTl~TL~fa~r~~  334 (334)
T cd01375         304 NCKTVMLATIWVEPSNLDETLSTLRFAQRVA  334 (334)
T ss_pred             CceEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999985

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily

Probab=100.00  E-value=1.5e-62  Score=436.68  Aligned_cols=252  Identities=40%  Similarity=0.603  Sum_probs=224.4

Q ss_pred             CcccCCccCccccccccCC--CCCCCcChHHHHHHHHHHhcccCC----CeEEEEEEEEecCceeecCCCC---CCCcCc
Q 024439            1 MAYGQTGTGKTYTLGRLGK--DDASERGIMVRALEDIISSMSVTS----DSVEVSYLQLYMESIQDLLAPE---KVNIPI   71 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~--~~~~~~Gli~r~~~~lf~~~~~~~----~~v~~S~~EIy~e~v~DLL~~~---~~~~~i   71 (267)
                      ||||++||||||||+|...  ....++|||||++++||+.+....    +.|.+||+|||+|+++|||++.   ...+.+
T Consensus        78 ~ayG~tgSGKT~Tm~G~~~~~~~~~~~Giipr~~~~LF~~~~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~l~i  157 (341)
T cd01372          78 LAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKIDEKKDEPDFQLKVSFLELYNEEVRDLLSPSTSEKSPIQI  157 (341)
T ss_pred             eeecCCCCCCcEEecCCCccccccccCChHHHHHHHHHHHHHhccccceEEEEEEEEEeECCeeecCCCCcccCCCCceE
Confidence            7999999999999988533  246789999999999999987654    4899999999999999999986   467899


Q ss_pred             ccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccC
Q 024439           72 NEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTEL  151 (267)
Q Consensus        72 ~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~  151 (267)
                      ++++. |.+++.|+++++|.|++|++++|+.|.++|....+..|..|||||+||+|+|.+.........           
T Consensus       158 ~e~~~-~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~~~~~~~~-----------  225 (341)
T cd01372         158 REDSK-GNIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGPIAP-----------  225 (341)
T ss_pred             EECCC-CCEecCCCEEEEECCHHHHHHHHHHHHHhcccccccCCCccCcCcEEEEEEEEEEecCCcccc-----------
Confidence            99886 459999999999999999999999999999999999999999999999999988754211000           


Q ss_pred             CCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHhhHHhc
Q 024439          152 PGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRLLRDSF  228 (267)
Q Consensus       152 ~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~lL~~~l  228 (267)
                      ...+.......|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|+.++   .++|||+|+||+||+|+|
T Consensus       226 ~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~aL~~vi~al~~~~~~~~~ipyR~S~LT~lL~~~L  305 (341)
T cd01372         226 MSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISALGDESKKGSHVPYRDSKLTRLLQDSL  305 (341)
T ss_pred             ccccCCCceeeEEEEEEECCCCcccccccCchhHhHHHHHHhHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHhc
Confidence            01122335678999999999999999999999999999999999999999999999876   699999999999999999


Q ss_pred             CCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          229 GGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       229 ~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      ||+++++||+||+|...+++||++||+||+|+++|+
T Consensus       306 gg~s~t~~I~~vsp~~~~~~eTl~tL~~a~~~~~ik  341 (341)
T cd01372         306 GGNSHTLMIACVSPADSNFEETLNTLKYANRARNIK  341 (341)
T ss_pred             CCCceEEEEEEeCCChhhHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999999985

Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis

Probab=100.00  E-value=2.3e-62  Score=431.77  Aligned_cols=239  Identities=43%  Similarity=0.638  Sum_probs=219.6

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCCCCcCcccCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKT   77 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~~   77 (267)
                      ||||++||||||||+|    +..++|||||++++||+.+...   .+.|.+||+|||+|+++|||+|....+++++++..
T Consensus        78 ~ayG~tgSGKT~T~~G----~~~~~Gli~r~~~~lf~~~~~~~~~~~~v~~S~~Eiy~e~v~DLL~~~~~~l~i~~~~~~  153 (321)
T cd01374          78 FAYGQTSSGKTFTMSG----DEQEPGIIPLAVRDIFQRIQDTPDREFLLRVSYLEIYNEKIKDLLSPSPQELRIREDPNK  153 (321)
T ss_pred             EeecCCCCCCceeccC----CCCCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEEcCEeEEccCCCCCCceEEECCCC
Confidence            6999999999999965    3478899999999999988554   45899999999999999999999889999999885


Q ss_pred             CCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCC
Q 024439           78 GEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHV  157 (267)
Q Consensus        78 g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (267)
                      | +++.|++++.|.|++|+.++|+.|.++|....+..|..|||||+||+|+|.+.....                  ...
T Consensus       154 ~-~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~------------------~~~  214 (321)
T cd01374         154 G-VVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSSRSHTIFQLTIESRERGD------------------SES  214 (321)
T ss_pred             C-EEeCCceEEEeCCHHHHHHHHHHHHhccccccCcCCCccccccEEEEEEEEEEecCC------------------CCC
Confidence            5 899999999999999999999999999999999999999999999999998864321                  112


Q ss_pred             CceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          158 PLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       158 ~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~--~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      .....|+|+||||||+|+..+.+ .+.+.+|+..||+||.+|++||.+|++++  .++|||+|+||+||+|+|+|+++++
T Consensus       215 ~~~~~s~l~~vDLAGsE~~~~~~-~~~~~~e~~~iN~Sl~~L~~vi~al~~~~~~~~vpyR~SkLT~lL~~~L~g~s~t~  293 (321)
T cd01374         215 GTVRVSTLNLIDLAGSERASQTG-AGERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPYRDSKLTRILQPSLSGNARTA  293 (321)
T ss_pred             CcEEEEEEEEEECCCCCccccCC-CCccccccchhhhHHHHHHHHHHHHHhcCCCCcCCCcCCHHHHHHHHhcCCCceEE
Confidence            34678999999999999998888 88899999999999999999999999985  8999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      ||+||+|...+++||++||+||+|+++|
T Consensus       294 ~i~~vsp~~~~~~eTl~TL~~a~r~~~i  321 (321)
T cd01374         294 IICTISPASSHVEETLNTLKFASRAKKV  321 (321)
T ss_pred             EEEEeCCccccHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999986

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group

Probab=100.00  E-value=1.5e-62  Score=432.59  Aligned_cols=231  Identities=39%  Similarity=0.558  Sum_probs=213.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCCCCCcCcccCCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTG   78 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~~g   78 (267)
                      ||||||||||||||+|    +..++|||||++++||+.+...  .+.|.+||+|||+|+++|||++ ...+.+++++. |
T Consensus        89 ~ayGqtGSGKTyTm~G----~~~~~Glipr~~~~lf~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~-~~~l~i~~~~~-~  162 (322)
T cd01367          89 FAYGQTGSGKTYTMLG----DENQEGLYALAARDIFRLLAQPNDDLGVTVSFFEIYGGKLFDLLND-RKRLSVLEDGK-G  162 (322)
T ss_pred             EeccCCCCCCceEecC----cCCcCccHHHHHHHHHHHHhccccccEEEEEEEeeecCchhhhccC-ccceeEEEcCC-C
Confidence            6999999999999966    4478899999999999998774  6799999999999999999998 56789999986 5


Q ss_pred             CccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCCC
Q 024439           79 EVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVP  158 (267)
Q Consensus        79 ~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (267)
                      .+++.|+++++|.|++|+.++|+.|..+|....+..|..|||||+||+|++.+...                        
T Consensus       163 ~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~------------------------  218 (322)
T cd01367         163 NVQIVGLTEKPVTSVDELLELIESGNSLRTTGSTGANDQSSRSHAILQIILKNKKL------------------------  218 (322)
T ss_pred             CEEeCCCEEEEeCCHHHHHHHHHHHhcccccccCcCCCCcccceEEEEEEEEEecC------------------------
Confidence            59999999999999999999999999999999999999999999999999987532                        


Q ss_pred             ceeeeeEEEEECCCCccccccC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEEE
Q 024439          159 LVRKSKLLIVDLAGSERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLI  237 (267)
Q Consensus       159 ~~~~s~l~fvDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~I  237 (267)
                      ....|+|+||||||+|+..... ..+.+.+|+..||+||.+|++||.+|++++.++|||+||||++|+|+|+|+|+++||
T Consensus       219 ~~~~s~l~~vDLAGsE~~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~al~~~~~~iPyRdSkLT~lL~~~L~g~~~t~~I  298 (322)
T cd01367         219 NKLLGKLSFIDLAGSERGADTSEHDRQTRKEGAEINKSLLALKECIRALASNKAHVPFRGSKLTQVLRDSFIGNSKTVMI  298 (322)
T ss_pred             CeeEEEEEEeecCCccccccccccchhhHHhHhHHhHHHHHHHHHHHHHhcCCCcCCCccCHHHHHHHHhhCCCCeEEEE
Confidence            2367999999999999987654 567889999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCChHHHHHHhHHHHHhh
Q 024439          238 ITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       238 ~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      +||+|...+++||++||+||+|++
T Consensus       299 ~~vsp~~~~~~eTl~tL~fa~r~k  322 (322)
T cd01367         299 ATISPSASSCEHTLNTLRYADRVK  322 (322)
T ss_pred             EEeCCchhhHHHHHHHHHHHHhhC
Confidence            999999999999999999999986

KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo

>KOG0242 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=6e-64  Score=471.72  Aligned_cols=239  Identities=46%  Similarity=0.690  Sum_probs=223.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCC---CeEEEEEEEEecCceeecCCCCCCCcCcccCCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTS---DSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKT   77 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~---~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~~   77 (267)
                      ||||+|||||||||    .|...+|||||+++.+||+.+....   +.|.|||+|||||.|+|||+|...++.+++|+..
T Consensus        91 FAYG~TgSGKTyTM----~G~~~~PGii~la~~dif~~I~~~~~r~f~v~vSYlEIYNE~I~DLL~~~~~~L~irED~~~  166 (675)
T KOG0242|consen   91 FAYGQTGSGKTYTM----SGSEDDPGIIPLAMKDIFEKIDKSGEREFSVRVSYLEIYNERIRDLLNPDGGDLRLREDSEG  166 (675)
T ss_pred             eeecCCCCCCceEE----eccCCCCCeeehHHHHHHHHHHhcCCceeEEEEEEEEEeccccccccCCCCCCceEeEcCCC
Confidence            89999999999999    4467789999999999999987765   7899999999999999999999999999999986


Q ss_pred             CCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCC
Q 024439           78 GEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHV  157 (267)
Q Consensus        78 g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (267)
                      | ++|.||++..|.|++++..+|..|..+|+++.|.+|..|||||+||+|.+.+.....                 .   
T Consensus       167 g-i~V~gL~e~~v~s~e~~~~ll~~g~~~R~~g~T~~N~~SSRSHaIl~i~i~s~~~~~-----------------~---  225 (675)
T KOG0242|consen  167 G-IVVPGLTEETVSSREELLELLQKGNKNRTTGETNLNEQSSRSHAILRITVESRGREA-----------------S---  225 (675)
T ss_pred             C-EEecCCeeecCCCHHHHHHHHHHhhccCcccccccccccchhhheeeEEEEeccccc-----------------c---
Confidence            5 999999999999999999999999999999999999999999999999998763321                 0   


Q ss_pred             CceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          158 PLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN--SPHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       158 ~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~--~~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                       . +.++|.||||||||+..++.+.|.+.+|+.+||+||.+|++||.+|+++  ..|||||||||||+||++|||+++|.
T Consensus       226 -~-~~s~L~lIDLAGSERas~T~~~G~RlkEG~~INrSLlaLgtVI~~Ls~~~~~~hipYRDSKLTRiLq~sLgGn~rt~  303 (675)
T KOG0242|consen  226 -S-RVSKLNLIDLAGSERASRTGNEGVRLKEGAHINRSLLALGTVINKLSEGKRPRHIPYRDSKLTRLLQDSLGGNARTA  303 (675)
T ss_pred             -c-hhheehhhhhhhhhhhhhhhccceeccccchhhHHHHHHHHHHHHHccccccCCCCccccHHHHhchhhcCCCccEE
Confidence             1 5689999999999999999999999999999999999999999999987  45899999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      +||||+|...+++||.+||+||+||++|.+.
T Consensus       304 ~I~tisp~~~~~~eT~nTL~fAsrak~i~~~  334 (675)
T KOG0242|consen  304 IIATISPSSSHYEETKNTLKFASRAKEITTK  334 (675)
T ss_pred             EEEEeCchhhHHHHHHHHHHHHHHhhhcccc
Confidence            9999999999999999999999999999875

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins

Probab=100.00  E-value=2.5e-61  Score=426.90  Aligned_cols=239  Identities=41%  Similarity=0.607  Sum_probs=221.4

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCC---CCCcCcc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPE---KVNIPIN   72 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~---~~~~~i~   72 (267)
                      ||||++||||||||+|    ...++|||||++++||+.+...     .+.|.+||+|||+|+++|||++.   ...+.++
T Consensus        82 ~ayG~tgSGKT~tl~G----~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~~l~i~  157 (329)
T cd01366          82 FAYGQTGSGKTYTMEG----PPENPGIIPRALEQLFNTAEELKEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIK  157 (329)
T ss_pred             EEeCCCCCCCcEEecC----CCCCCCcHHHHHHHHHHHHHhhhccCceEEEEEEEEEEECCEeEECCCCCcCCCCceEEE
Confidence            6999999999999966    4478899999999999987654     34799999999999999999986   6788999


Q ss_pred             cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439           73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP  152 (267)
Q Consensus        73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~  152 (267)
                      +++. |.++++|+++++|.|++|+.+++..|.++|....+..|..|||||+||+|+|.+....                 
T Consensus       158 ~~~~-~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~~~-----------------  219 (329)
T cd01366         158 HDSK-GETYVTNLTEVPVSSPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQ-----------------  219 (329)
T ss_pred             ECCC-CCEEecCCEEEEeCCHHHHHHHHHHHHhhcccccccccCCCCCccEEEEEEEEEEcCC-----------------
Confidence            9984 6699999999999999999999999999999999999999999999999999876331                 


Q ss_pred             CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCC
Q 024439          153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA  232 (267)
Q Consensus       153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~  232 (267)
                          .+....|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|+.+..++|||+|+||++|+|+|+|++
T Consensus       220 ----~~~~~~s~l~~VDLaGsE~~~~~~~~~~~~~e~~~in~Sl~~L~~vl~~l~~~~~~ipyr~S~LT~lL~~~l~g~~  295 (329)
T cd01366         220 ----TGEQTRGKLNLVDLAGSERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGNS  295 (329)
T ss_pred             ----CCcEEEEEEEEEECCCCcccccccccchhhHhHhhhhhHHHHHHHHHHHHhcCCCcCCCcccHhHHHHHHhcCCCc
Confidence                1245789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          233 RTSLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       233 ~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      +++||+||+|...+++||++||+||+|+++|+|
T Consensus       296 ~t~~i~~vsp~~~~~~etl~tL~~a~~~~~i~~  328 (329)
T cd01366         296 KTLMFVNISPLESNLSETLCSLRFASRVRSVEL  328 (329)
T ss_pred             eEEEEEEeCCchhhHHHHHHHHHHHHHhhcccC
Confidence            999999999999999999999999999999976

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport

Probab=100.00  E-value=1.1e-61  Score=430.42  Aligned_cols=244  Identities=47%  Similarity=0.699  Sum_probs=220.5

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC------CCeEEEEEEEEecCceeecCCCC----CCCcC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT------SDSVEVSYLQLYMESIQDLLAPE----KVNIP   70 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~------~~~v~~S~~EIy~e~v~DLL~~~----~~~~~   70 (267)
                      ||||++||||||||+|.  ....++|||||++++||..+...      .+.|++||+|||+|+|+|||++.    ...+.
T Consensus        79 ~ayG~tgSGKT~Tm~G~--~~~~~~Gli~~~~~~lf~~~~~~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~~l~  156 (335)
T PF00225_consen   79 FAYGQTGSGKTYTMFGS--NDPSEPGLIPRALRDLFSQIEERKEKSGYEFSVSVSYLEIYNEKVYDLLSPNNSKSRKPLK  156 (335)
T ss_dssp             EEEESTTSSHHHHHTBS--TSTTTBSHHHHHHHHHHHHHHHHTTTSTEEEEEEEEEEEEETTEEEETTSTTSSSTTSEBE
T ss_pred             Eeecccccccccccccc--ccccccchhhhHHHHHhhhhccccccccccccccccchhhhhhhhhhhcCccccccccccc
Confidence            69999999999999774  44778999999999999998653      46899999999999999999997    35689


Q ss_pred             cccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccccccc
Q 024439           71 INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTE  150 (267)
Q Consensus        71 i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~  150 (267)
                      +++++..|.++++|+++++|.+++|+..+|..|.++|....+..|..|||||+||+|+|.+........           
T Consensus       157 i~~~~~~g~~~i~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~sSRSH~i~~i~v~~~~~~~~~~-----------  225 (335)
T PF00225_consen  157 IREDSNKGSVYIKGLTEVEVKSAEEALQLLKKGQKNRRTASTKMNARSSRSHAIFTIHVEQKDRDPSDD-----------  225 (335)
T ss_dssp             EEEETTTEEEEETTSEEEEESSHHHHHHHHHHHHHHHTCTSSSCTHHGGGSEEEEEEEEEEEETTTTTE-----------
T ss_pred             eeeccccccceeeccccccccccccccccccchhhcccccccccccccccccccccccccccccccccc-----------
Confidence            999988778999999999999999999999999999999999999999999999999998874432110           


Q ss_pred             CCCCCCCCceeeeeEEEEECCCCccccccCC-CchhHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCchhhHhhHHh
Q 024439          151 LPGDNHVPLVRKSKLLIVDLAGSERIDKSGS-EGPLLEEAKFINLSLSSLGKCINALAEN--SPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       151 ~~~~~~~~~~~~s~l~fvDLagse~~~~~~~-~~~~~~e~~~in~sl~~L~~vi~~l~~~--~~~ipyr~SkLT~lL~~~  227 (267)
                            ......|+|+||||||+|+..+... .+.+.+|+..||+||.+|++||.+|+++  ..++|||+|+||+||+|+
T Consensus       226 ------~~~~~~s~l~~vDLaGsE~~~~~~~~~~~~~~e~~~in~Sl~~L~~vi~~L~~~~~~~~vpyr~SkLT~lL~d~  299 (335)
T PF00225_consen  226 ------EESVKHSRLTFVDLAGSERLKKSGASDGQRLKESSNINKSLSALGNVIRALAQGSKQSHVPYRDSKLTRLLKDS  299 (335)
T ss_dssp             ------EEEEEEEEEEEEEEEESTGGCGCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSTSSSCGGGSHHHHHTGGG
T ss_pred             ------ccceeecceeeeecccccccccccccccccccccceecchhhhhhhhHhhhhccccchhhhhhcccccceeccc
Confidence                  0125789999999999999888886 4778999999999999999999999999  889999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+|+|+++||+||+|...+++||++||+||+++++|
T Consensus       300 l~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~~I  335 (335)
T PF00225_consen  300 LGGNSKTILIVCVSPSSEDYEETLSTLRFASRAREI  335 (335)
T ss_dssp             TSSSSEEEEEEEE-SBGGGHHHHHHHHHHHHHHTTE
T ss_pred             ccccccceeEEEcCCccccHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999986

The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....

>smart00129 KISc Kinesin motor, catalytic domain

Probab=100.00  E-value=3.8e-59  Score=414.15  Aligned_cols=242  Identities=46%  Similarity=0.673  Sum_probs=222.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||++||||||||+|    +.+++|||||++++||+.+...    .+.|.+||+|||+|+++|||++.+..+.+++++.
T Consensus        84 ~~yG~tgSGKT~tl~G----~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~l~i~~~~~  159 (335)
T smart00129       84 FAYGQTGSGKTYTMSG----TPDSPGIIPRALKDLFEKIDKLEEGWQFQVKVSYLEIYNEKIRDLLNPSPKKLEIREDKK  159 (335)
T ss_pred             EEeCCCCCCCceEecC----CCCCCCHHHHHHHHHHHHhhhcccCceEEEEEEEEEEECCEEEECcCCCCCCcEEEECCC
Confidence            6899999999999966    4567899999999999988654    4689999999999999999999988999999986


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                       |.+++.|+++++|.|++|+.++++.+.++|...++..|..|||||+||+|++.+....                   ..
T Consensus       160 -~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsH~i~~l~v~~~~~~-------------------~~  219 (335)
T smart00129      160 -GGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVESKIKN-------------------SS  219 (335)
T ss_pred             -CCEEecCCEEEEeCCHHHHHHHHHHHHhccccccCCCCCCCCcceEEEEEEEEEEecC-------------------CC
Confidence             5599999999999999999999999999999999999999999999999999875221                   11


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE--NSPHIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~--~~~~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                      ......|+|+||||||+|+..+.+..+.+.+|+..||+||.+|++|+.+|++  +..++|||+|+||+||+++|+|++++
T Consensus       220 ~~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~~l~~l~~~~~~~~ip~r~S~LT~lL~~~L~g~~~~  299 (335)
T smart00129      220 SGSGKASKLNLVDLAGSERASKTGAEGDRLKEAGNINKSLSALGNVINALADGQKSRHIPYRDSKLTRLLQDSLGGNSKT  299 (335)
T ss_pred             CCCEEEEEEEEEECCCCCccccccChhHHHHhhchhhhHHHHHHHHHHHHHhcCCCCCCCCcCcHhHHHHHHHcCCCCeE
Confidence            2346789999999999999999999999999999999999999999999999  56699999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      +||+||+|..++++||++||+||+++++|+|.
T Consensus       300 ~~i~~vsp~~~~~~eTl~tL~~a~~~~~i~~~  331 (335)
T smart00129      300 LMIANISPSLSNLEETLSTLRFASRAKEIKNK  331 (335)
T ss_pred             EEEEEcCCCccchHHHHHHHHHHHHHhhcccC
Confidence            99999999999999999999999999999985

ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.

>cd00106 KISc Kinesin motor domain

Probab=100.00  E-value=5.5e-58  Score=405.74  Aligned_cols=237  Identities=48%  Similarity=0.686  Sum_probs=219.0

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCC-----CeEEEEEEEEecCceeecCCCC--CCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTS-----DSVEVSYLQLYMESIQDLLAPE--KVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~-----~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~   73 (267)
                      ||||++||||||||+|    +..++|||||++++||+.+....     +.|.+||+|||+|+++|||++.  ...+.+++
T Consensus        83 ~~yG~tgSGKT~tl~G----~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~v~~S~~Ei~~e~v~DLL~~~~~~~~l~i~~  158 (328)
T cd00106          83 FAYGQTGSGKTYTMFG----SPKDPGIIPRALEDLFNLIDERKEKNKSFSVSVSYLEIYNEKVYDLLSPEPPSKPLSLRE  158 (328)
T ss_pred             EEecCCCCCCeEEecC----CCCCCchHHHHHHHHHHHHhhccccCceEEEEEEEEEEECCEeEECCCCCCCCCCcEEEE
Confidence            6899999999999955    45789999999999999987654     6899999999999999999998  88999999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. +.+++.|+++++|.|++|+.++++.|.++|....+..|..|||||+||+|+|.+.......               
T Consensus       159 ~~~-~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~~~---------------  222 (328)
T cd00106         159 DPK-GGVYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHAIFTIHVEQRNTTNDG---------------  222 (328)
T ss_pred             cCC-CCEEEeCCEEEEeCCHHHHHHHHHHHHhhcCcccCcCCCCcCcCcEEEEEEEEEEecCCCC---------------
Confidence            987 4589999999999999999999999999999999999999999999999999887443210               


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCchhhHhhHHhcCCC
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGS  231 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~--~~ipyr~SkLT~lL~~~l~g~  231 (267)
                          .....|+|+||||||+|+....+..+.+..|+..||+||.+|.+||.+|+.+.  .++|||+|+||+||+|+|+|+
T Consensus       223 ----~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~vl~~l~~~~~~~~ip~r~SkLT~lL~~~l~g~  298 (328)
T cd00106         223 ----RSIKSSKLNLVDLAGSERAKKTGAEGDRLKEAKNINKSLSALGNVISALSSGQKKKHIPYRDSKLTRLLQDSLGGN  298 (328)
T ss_pred             ----ccEEEEEEEEEECCCCCcccccCCchhhhHhHHhhhhhHHHHHHHHHHHHhcCCCCcCCCcCcHHHHHHHHhcCCC
Confidence                13578999999999999999988899999999999999999999999999988  899999999999999999999


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      ++++||+||+|..++++||++||+||+|++
T Consensus       299 ~~t~~I~~vsp~~~~~~eTl~tL~~a~r~~  328 (328)
T cd00106         299 SKTLMIANISPSSENYDETLSTLRFASRAK  328 (328)
T ss_pred             CeEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999985

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil

>KOG0246 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=9.2e-59  Score=411.97  Aligned_cols=238  Identities=34%  Similarity=0.520  Sum_probs=216.5

Q ss_pred             CcccCCccCccccccccCC--CCCCCcChHHHHHHHHHHhcccCC-----CeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGK--DDASERGIMVRALEDIISSMSVTS-----DSVEVSYLQLYMESIQDLLAPEKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~--~~~~~~Gli~r~~~~lf~~~~~~~-----~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~   73 (267)
                      ||||||||||||||+|...  ...-..||..++.+++|..+..-.     ..|++||+|||+.+|||||++ +..+.+.+
T Consensus       296 FAYGQTGSGKT~TMggdfsgk~q~~s~giya~aa~Dvf~~L~~p~Y~~~~l~v~~tFFEIYgGKvfDLL~~-k~KLrvLE  374 (676)
T KOG0246|consen  296 FAYGQTGSGKTYTMGGDFSGKAQDCSKGIYALAARDVFRLLRQPTYRKLDLKVYVTFFEIYGGKVYDLLND-KKKLRVLE  374 (676)
T ss_pred             eeeccCCCCceeecccccCcccccccccchhhhhhHHHHHhcccchhhcceEEEEEEEEEeCcchhhhhcc-ccceEEee
Confidence            7999999999999988433  344567999999999999887643     489999999999999999998 67778888


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      |.+ +.++|-||++.+|.+.+|++.+|+.|...|+.+.|..|..|||||+||+|.+....                    
T Consensus       375 Dg~-QQVqVVGLqE~~v~~~eeVl~lIe~Gns~RtsG~TsANs~SSRSHAvfQIilr~~~--------------------  433 (676)
T KOG0246|consen  375 DGN-QQVQVVGLQEEEVSGVEEVLELIEKGNSCRTSGQTSANSNSSRSHAVFQIILRKHG--------------------  433 (676)
T ss_pred             cCC-ceEEEeeceeeeccCHHHHHHHHHhcccccccCcccCcccccccceeEeeeeecCC--------------------
Confidence            875 67999999999999999999999999999999999999999999999999986531                    


Q ss_pred             CCCCCceeeeeEEEEECCCCcc-ccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCC-C
Q 024439          154 DNHVPLVRKSKLLIVDLAGSER-IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGG-S  231 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~-~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g-~  231 (267)
                          +....+++.||||||+|| .+.+.+..+...|+..||+||.+|..||++|.+++.|+|||.||||.+|+|+|-| +
T Consensus       434 ----~~k~hGKfSlIDLAGnERGaDts~adRqtRlEGAEINKSLLALKECIRaLg~nk~H~PFR~SKLTqVLRDSFIGen  509 (676)
T KOG0246|consen  434 ----EFKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKSHLPFRGSKLTQVLRDSFIGEN  509 (676)
T ss_pred             ----cceeEeEEEEEEccCCccCCcccccchhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHhhcCCC
Confidence                124689999999999999 5667788888999999999999999999999999999999999999999999988 9


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      ++|+||+||||.....+.||+||+||+|++++.
T Consensus       510 SrTcMIA~ISPg~~ScEhTLNTLRYAdRVKeLs  542 (676)
T KOG0246|consen  510 SRTCMIATISPGISSCEHTLNTLRYADRVKELS  542 (676)
T ss_pred             CceEEEEEeCCCcchhhhhHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999864

>KOG0241 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=2.8e-59  Score=431.80  Aligned_cols=244  Identities=37%  Similarity=0.584  Sum_probs=222.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCCC--CCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPEK--VNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~~--~~~~i~~   73 (267)
                      ||||||||||||||.    |..+.+|||||+++.||..+...     .++|.+||+|||||+++|||+|+.  ..+.+++
T Consensus        98 faYGQtGsGKsYsmm----Gt~~QpGiIPrlc~~lFe~I~k~~n~~~tfkVeVSymEIynEkv~DLLdPk~ssqtlkVre  173 (1714)
T KOG0241|consen   98 FAYGQTGSGKSYSMM----GTAEQPGIIPRLCESLFERIDKESNPSQTFKVEVSYMEIYNEKVRDLLDPKGSSQTLKVRE  173 (1714)
T ss_pred             EEecccCCCceeEee----ccCCCCCchhHHHHHHHHHHHhccCCCceEEEEEEHHHHhhcchhhhhCCCCCcceeEEee
Confidence            799999999999994    46778999999999999998654     358999999999999999999964  4689999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      +...| .++.||++..|.|++|+-.++..|.+.|+.+.+++|..|+|||+||.|.|.|.-.+...               
T Consensus       174 hsvlG-p~vdGLS~laV~S~qdId~lm~egnKsrtvaatnmn~EssrsHaVFslvvtQ~l~D~kt---------------  237 (1714)
T KOG0241|consen  174 HSVLG-PYVDGLSQLAVTSFQDIDSLMSEGNKSRTVAATNMNEESSRSHAVFSLVVTQTLYDLKT---------------  237 (1714)
T ss_pred             ccccc-ccccchhhhhcccHHHHHHHHHhccccceeeeecccccccccceeEEEEEeeEEecccc---------------
Confidence            99999 78999999999999999999999999999999999999999999999999887443211               


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCCCCchhhHhhHHh
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------SPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~------~~~ipyr~SkLT~lL~~~  227 (267)
                        +...-+.|+|.+|||||+|+..+.+..+.+.+|+.+||+||.+|+.||.+|+.+      +++||||||.||+||+|.
T Consensus       238 --g~SgeKvsklslVDLAgserasktga~g~rlkegsNinkSLttLglVIsaLadq~n~kgkdKfvPYrDSVLTwLLkD~  315 (1714)
T KOG0241|consen  238 --GHSGEKVSKLSLVDLAGSERASKTGAAGSRLKEGSNINKSLTTLGLVISALADQKNGKGKDKFVPYRDSVLTWLLKDN  315 (1714)
T ss_pred             --CcchhheeeeeEEEeccccccccccchhhhhhhcCCcchhhHHHHHHHHHHHHhhcCCCccccccchhHHHHHHHHhh
Confidence              111236799999999999999999999999999999999999999999999864      348999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |||||+|+||+||||+.++|+||++||+||+||++|+|+
T Consensus       316 LGGNsrTvMiatvSPaAdnyeeTlStLRYadrAkrIvN~  354 (1714)
T KOG0241|consen  316 LGGNSRTVMIATVSPAADNYEETLSTLRYADRAKRIVNH  354 (1714)
T ss_pred             cCCCceeEEEEEecccccchHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999996

>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]

Probab=100.00  E-value=5.4e-57  Score=423.21  Aligned_cols=238  Identities=41%  Similarity=0.585  Sum_probs=219.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCC--CCCcCcccC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPE--KVNIPINED   74 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~~   74 (267)
                      ||||||||||||||.|+   .++++|||||++++||..+..    +.+.+.+||+|||||.++|||++.  ...+.|+++
T Consensus       397 FAYGQTGSGKTyTM~G~---~~~~~Giipral~~lF~~~~~~~~g~~y~~~~s~~EIYNe~i~DlL~~~~~~~k~~I~~~  473 (670)
T KOG0239|consen  397 FAYGQTGSGKTYTMSGP---TPEDPGIIPRALEKLFRTITSLKSGWKYDKTVSMLEIYNEAIRDLLSDESYVGKLEIVDD  473 (670)
T ss_pred             EEecccCCCccccccCC---CcccCCccHHHHHHHHHHHHhhccCceEEeeeehhHHHHHHHHHhccccccccceeEEEc
Confidence            79999999999999664   778899999999999987754    356899999999999999999987  467888888


Q ss_pred             CCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCC
Q 024439           75 PKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGD  154 (267)
Q Consensus        75 ~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~  154 (267)
                      +. |...|.+++.+.|.+.+|+..+++.|..+|+.++|..|.+|||||+||+++|.....                    
T Consensus       474 ~~-~~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~~~--------------------  532 (670)
T KOG0239|consen  474 AE-GNLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGINE--------------------  532 (670)
T ss_pred             CC-CceecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEecccc--------------------
Confidence            76 459999999999999999999999999999999999999999999999999966422                    


Q ss_pred             CCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439          155 NHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       155 ~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                       ..+....+.|+|||||||||..+++..+.+.+|..+||+||.+|+.||.+|+....|||||+||||+||+++|||+++|
T Consensus       533 -~t~~~~~g~l~LVDLAGSER~~~s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKLT~lLq~sLGG~sKT  611 (670)
T KOG0239|consen  533 -LTGIRVTGVLNLVDLAGSERVSKSGVTGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKLTQLLQDSLGGDSKT  611 (670)
T ss_pred             -CcccccccceeEeecccCcccCcCCCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccchHHHhHhhhCCccce
Confidence             1234567999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      +|+++|+|...++.||+++|+||+|++.+
T Consensus       612 Lmfv~isP~~~~~~Etl~sL~FA~rv~~~  640 (670)
T KOG0239|consen  612 LMFVNISPAAAALFETLCSLRFATRVRSV  640 (670)
T ss_pred             eeEEEeCccHHHHhhhhhccchHHHhhce
Confidence            99999999999999999999999999865

>KOG0247 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=1.1e-55  Score=402.37  Aligned_cols=241  Identities=36%  Similarity=0.554  Sum_probs=214.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCC-------------------------------------
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTS-------------------------------------   43 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~-------------------------------------   43 (267)
                      |+||-|||||||||    .|++.++||+||+++-||..+....                                     
T Consensus       119 FTyGVTgSGKTYTm----~G~~~~~GIlPR~Ld~iF~siq~~~~~k~~~kp~~s~~~e~~~~~~alL~lkr~~~~nd~~~  194 (809)
T KOG0247|consen  119 FTYGVTGSGKTYTM----TGTPDRPGILPRALDVIFNSIQGRQAKKPVFKPLRSNLFEIKAEEDALLQLKREAMLNDRKS  194 (809)
T ss_pred             EEeeccCCCceEEe----ecCCCCCCchHHHHHHHHHHhhceeccCceeccccchHHHHHHHHHHHHhhhhhhccccccC
Confidence            79999999999999    4567889999999999998663311                                     


Q ss_pred             -------------------------------CeEEEEEEEEecCceeecCCCCCC-----C-cCcccCCCCCCccCCCCe
Q 024439           44 -------------------------------DSVEVSYLQLYMESIQDLLAPEKV-----N-IPINEDPKTGEVSLPGAT   86 (267)
Q Consensus        44 -------------------------------~~v~~S~~EIy~e~v~DLL~~~~~-----~-~~i~~~~~~g~~~i~~l~   86 (267)
                                                     +.|+|||+|||||.+||||.+...     . ..+++|. .|.++|+|++
T Consensus       195 ts~~~~~~~~e~~e~~~~~e~~~~~l~~d~~ysV~VSf~EIYN~~iYDLLe~~s~q~~~~~~~ll~~d~-~~~~~Vkgl~  273 (809)
T KOG0247|consen  195 TSKAHRQSTPEYAEHIHVIEQPALELDEDIVYSVFVSFVEIYNNYIYDLLEDASFQGKLQKLKLLREDT-NGNMYVKGLT  273 (809)
T ss_pred             cchhhccccHHHHhhcchhcccccccCcCcEEEEEeeHHHHHHHHHHHhhccccccchhhhhhhhhhcc-CCCeeecccc
Confidence                                           039999999999999999987533     2 3344554 5889999999


Q ss_pred             EEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCCCceeeeeEE
Q 024439           87 VVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL  166 (267)
Q Consensus        87 ~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~  166 (267)
                      +|+|.+.+||+++|+.|+++|+.++|..|..|||||+||+|.+.+.....                   ....+..|.|.
T Consensus       274 ~V~VssseEA~~l~~lGqk~r~~asT~lN~~SSRSHsVFtIkl~q~~~~~-------------------~s~~i~vSqls  334 (809)
T KOG0247|consen  274 EVEVSSSEEALELFQLGQKRRRVASTKLNANSSRSHSVFTIKLVQAPRSQ-------------------DSNQITVSQLS  334 (809)
T ss_pred             EEEeccHHHHHHHHHHHHhhhhhhheeccccccccceeEEEEeeeccccc-------------------ccCceeEEeee
Confidence            99999999999999999999999999999999999999999999875431                   12356889999


Q ss_pred             EEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCCCCCchhhHhhHHhcCCCCeEEEEEEeC
Q 024439          167 IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-----SPHIPTRDSKLTRLLRDSFGGSARTSLIITVG  241 (267)
Q Consensus       167 fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-----~~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vs  241 (267)
                      |||||||||..+..+.|.+++|+.+||.||.+|++||.+|+++     +..+||||||||++++.+|.|..++.||.||+
T Consensus       335 LvDLAGSERt~rtq~sG~RLrEagNINtSLmTLg~Cie~LR~nqk~ks~~~VPyRdSKLThlfq~~f~G~gki~MIV~vn  414 (809)
T KOG0247|consen  335 LVDLAGSERTNRTQNSGERLREAGNINTSLMTLRRCIDVLRENQKSKSQKIVPYRDSKLTHLFKNYFDGKGKIRMIVCVN  414 (809)
T ss_pred             eeecccchhcccccchhHHHHhhccccHHHHHHHHHHHHHHHHhhhhccccCcchHHHHHHHHHHhcCCCCcEEEEEecC
Confidence            9999999999999999999999999999999999999999875     35899999999999999999999999999999


Q ss_pred             CCCCChHHHHHHhHHHHHhhhhhc
Q 024439          242 PSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       242 p~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      |.+++|+|+++.|+||.-+.+|.+
T Consensus       415 p~~e~YdEnl~vlkFaeiaq~v~v  438 (809)
T KOG0247|consen  415 PKAEDYDENLNVLKFAEIAQEVEV  438 (809)
T ss_pred             CchhhHHHHHHHHHHHHhcccccc
Confidence            999999999999999999988764

>KOG0244 consensus Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=1.6e-53  Score=398.08  Aligned_cols=244  Identities=39%  Similarity=0.579  Sum_probs=218.1

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCCC--CcCcccCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEKV--NIPINEDP   75 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~~--~~~i~~~~   75 (267)
                      +|||||||||||||++...+..++.|+|||++..+|..+...   .+.|.+||+|+|++.|+|||.|...  ++.+++  
T Consensus        70 laygQtgsgkTytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~~~f~i~vs~vely~e~v~dl~~~~~~~~~i~~~e--  147 (913)
T KOG0244|consen   70 LAYGQTGSGKTYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTESFVFRITVSFVELYNEEVLDLLKPSRLKANIKLRE--  147 (913)
T ss_pred             eeecccCCCceeecccccccccccCCcCcchHHHHHHHHHhhhccceeeeeeeeeccchhhhhhcChhhhhhceeccc--
Confidence            589999999999997643344445799999999999998665   3689999999999999999997543  455555  


Q ss_pred             CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439           76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN  155 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (267)
                      ..|.+.+.+++++.|.+..+....|..|...|+.++|.+|..|||||+||++.+.+......                  
T Consensus       148 ~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~------------------  209 (913)
T KOG0244|consen  148 PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK------------------  209 (913)
T ss_pred             cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc------------------
Confidence            34779999999999999999999999999999999999999999999999999977422111                  


Q ss_pred             CCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCchhhHhhHHhcCCCCe
Q 024439          156 HVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP--HIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       156 ~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~--~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                        ....+++|+||||||+|+..++...+.+++|+.+||.+|.+|++||.+|.+.+.  |+|||+|+|||||+|+||||+.
T Consensus       210 --~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk~~~vpyRdSkltrlLQdslgGns~  287 (913)
T KOG0244|consen  210 --RSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKKGGEVPYRDSKLTRLLQDSLGGNSD  287 (913)
T ss_pred             --cchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhcCCcccchHHHHHHHHHHHhcCCcc
Confidence              124679999999999999999999999999999999999999999999998766  9999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ++||+||||+..+.+||++||+||.|+++|.|-
T Consensus       288 tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk  320 (913)
T KOG0244|consen  288 TLMIACISPADSNAQETLNTLRYADRAKQIKNK  320 (913)
T ss_pred             eeeeeecChhhhhhhhHHHHHHHhhHHHHhccc
Confidence            999999999999999999999999999999873

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]

Probab=100.00  E-value=2e-50  Score=376.80  Aligned_cols=241  Identities=42%  Similarity=0.633  Sum_probs=219.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||    .|...++||||+++.+||+.+...    .+.|.+||+|||+|+++|||.+....+.++++..
T Consensus        94 fayGqTgsgKtyt~----~G~~~~~Gii~~~l~~lf~~l~~~~~~~~~~v~is~lEiYnEk~~DLl~~~~~~~~~~~~~~  169 (568)
T COG5059          94 FAYGQTGSGKTYTM----SGTEEEPGIIPLSLKELFSKLEDLSMTKDFAVSISYLEIYNEKIYDLLSPNEESLNIREDSL  169 (568)
T ss_pred             EEEcccCCCceeEe----ecCccccchHHHHHHHHHHHHHhcccCcceeeEeehhHHHhhHHHhhccCccccccccccCC
Confidence            79999999999999    445688999999999999987654    4689999999999999999999777667777776


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +.+.++++..+.+.+|++.+|+++..+|+.+.+..|..|+|+|.+|++++.+......                   
T Consensus       170 ~~-v~v~~l~~~~~~s~ee~l~~l~~~~~nr~~~~te~n~~ssRshsi~~i~~~~~~~~~~-------------------  229 (568)
T COG5059         170 LG-VKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEINDESSRSHSIFQIELASKNKVSG-------------------  229 (568)
T ss_pred             Cc-eEeecceEEecCChHHHHHHHHHhhhhcccccchhccccccceEEEEEEEEEeccCcc-------------------
Confidence            44 9999999999999999999999999999999999999999999999999988643221                   


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE--NSPHIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~--~~~~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                        ....+++.+|||||+|+.......+.+..|+..||+||.+|++||.+|..  +..|+|||+|+|||+|+++|||++++
T Consensus       230 --~~~~~~l~lvDLagSE~~~~~~~~~~r~~E~~~iN~sLl~Lg~vI~~L~~~~~~~~ipyReskLTRlLq~sLgG~~~~  307 (568)
T COG5059         230 --TSETSKLSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINALGDKKKSGHIPYRESKLTRLLQDSLGGNCNT  307 (568)
T ss_pred             --ceecceEEEEeeccccccchhhcccchhhhhhhhHhhHHHHHHHHHHHhccccCCccchhhhHHHHHHHHhcCCCccE
Confidence              22337999999999999999999999999999999999999999999997  77899999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhhhhccC
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSIRISVV  267 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~~  267 (267)
                      .+||||+|...++++|.+||+||.|++.|.|.+
T Consensus       308 ~~i~~Isp~~~~~~et~~tL~~a~rak~I~~~~  340 (568)
T COG5059         308 RVICTISPSSNSFEETINTLKFASRAKSIKNKI  340 (568)
T ss_pred             EEEEEEcCCCCchHHHHHHHHHHHHHhhcCCcc
Confidence            999999999999999999999999999998864

>cd01363 Motor_domain Myosin and Kinesin motor domain

Probab=100.00  E-value=1.4e-43  Score=289.13  Aligned_cols=159  Identities=46%  Similarity=0.693  Sum_probs=145.0

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCCCeEEEEEEEEecCceeecCCCCCCCcCcccCCCCCCc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPKTGEV   80 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~~g~~   80 (267)
                      ||||++||||||||+|.    ..++|||||++++                                              
T Consensus        28 ~~yG~tGsGKT~Tm~G~----~~~~Giip~~~~~----------------------------------------------   57 (186)
T cd01363          28 FAYGQTGSGKTYTMEGK----REGAGIIPRTVTD----------------------------------------------   57 (186)
T ss_pred             EEECCCCCcceEecCCC----CCCCCcchHHHHH----------------------------------------------
Confidence            69999999999999663    4788999999988                                              


Q ss_pred             cCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCCCce
Q 024439           81 SLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLV  160 (267)
Q Consensus        81 ~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (267)
                                     +++++..|..+|..+.+..|..|||+|+||+|++.+.....                  ......
T Consensus        58 ---------------~~~ll~~g~~~R~~~~t~~N~~SSRsH~i~~i~v~~~~~~~------------------~~~~~~  104 (186)
T cd01363          58 ---------------VIDLMDKGNANRTTAATAMNEHSSRSHSVFRIHFGGKNALA------------------SATEQP  104 (186)
T ss_pred             ---------------HHHHHhhccccccccccCCCCccCcccEEEEEEEEEeecCC------------------CCccce
Confidence                           78899999999999999999999999999999998764321                  112345


Q ss_pred             eeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEEEEEe
Q 024439          161 RKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITV  240 (267)
Q Consensus       161 ~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~I~~v  240 (267)
                      ..++|+||||||+|+.++.+..+.+.+|+..||+||.+|++||.+|++++.++|||+||||++|+|+|+|+|+++||+||
T Consensus       105 ~~s~l~lVDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~~i~~l~~~~~~vpyr~SkLT~lL~~~L~g~~~t~~i~~v  184 (186)
T cd01363         105 KVGKINLVDLAGSERIDFSGAEGSRLTETANINKSLSTLGNVISALAERDSHVPYRESKLTRLLQDSLGGNSRTLMVACI  184 (186)
T ss_pred             eeeeEEEEEccccccccccCCchhhHHHHHHHhhHHHHHHHHHHHHhcCCCCCCCcccHHHHHHHHhcCCCCeEEEEEEe
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q 024439          241 GP  242 (267)
Q Consensus       241 sp  242 (267)
                      +|
T Consensus       185 sP  186 (186)
T cd01363         185 SP  186 (186)
T ss_pred             Cc
Confidence            98

These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=94.64  E-value=0.031  Score=51.70  Aligned_cols=12  Identities=67%  Similarity=0.889  Sum_probs=11.4

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      -||||||||.||
T Consensus       264 TGPTGSGKTTTL  275 (500)
T COG2804         264 TGPTGSGKTTTL  275 (500)
T ss_pred             eCCCCCCHHHHH
Confidence            499999999999

>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]

Probab=94.24  E-value=0.029  Score=52.08  Aligned_cols=57  Identities=21%  Similarity=0.333  Sum_probs=33.0

Q ss_pred             ccCCccCcccccccc----CCC---CCCCcChHHHHHHHHHHhcccCCCeEEEEEEEEecCcee
Q 024439            3 YGQTGTGKTYTLGRL----GKD---DASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQ   59 (267)
Q Consensus         3 yG~tgSGKT~Tl~G~----~~~---~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~~EIy~e~v~   59 (267)
                      -|.|||||||||-..    +..   -..+.-|.-+...++-....+..-...+||+..|+-+.|
T Consensus        38 LGvTGSGKTfT~AnVI~~~~rPtLV~AhNKTLAaQLy~Efk~fFP~NaVEYFVSYYDYYQPEAY  101 (663)
T COG0556          38 LGVTGSGKTFTMANVIAKVQRPTLVLAHNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAY  101 (663)
T ss_pred             eeeccCCchhHHHHHHHHhCCCeEEEecchhHHHHHHHHHHHhCcCcceEEEeeeccccCcccc
Confidence            489999999999210    000   022334433333333333344445799999999987643

>smart00053 DYNc Dynamin, GTPase

Probab=93.39  E-value=0.74  Score=38.98  Aligned_cols=52  Identities=13%  Similarity=0.220  Sum_probs=32.4

Q ss_pred             eCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCCCCceeeeeEEEEE
Q 024439           90 LRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVD  169 (267)
Q Consensus        90 v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~fvD  169 (267)
                      +.+++++...+..+...- ...     ...-|.-++.+++..-                            ..-.++|||
T Consensus        86 ~~~~~~v~~~i~~~~~~~-~~~-----~~~~s~~~i~l~i~~p----------------------------~~~~ltLID  131 (240)
T smart00053       86 FTDFDEVRNEIEAETDRV-TGT-----NKGISPVPINLRVYSP----------------------------HVLNLTLID  131 (240)
T ss_pred             cCCHHHHHHHHHHHHHHh-cCC-----CCcccCcceEEEEeCC----------------------------CCCceEEEe
Confidence            467889888888765431 111     1223556666766331                            234789999


Q ss_pred             CCCCcc
Q 024439          170 LAGSER  175 (267)
Q Consensus       170 Lagse~  175 (267)
                      |+|...
T Consensus       132 lPGl~~  137 (240)
T smart00053      132 LPGITK  137 (240)
T ss_pred             CCCccc
Confidence            999864

Large GTPases that mediate vesicle trafficking. Dynamin participates in the endocytic uptake of receptors, associated ligands, and plasma membrane following an exocytic event.

>PRK06620 hypothetical protein; Validated

Probab=88.73  E-value=0.13  Score=42.84  Aligned_cols=13  Identities=38%  Similarity=0.626  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||++||||||.+
T Consensus        49 l~Gp~G~GKThLl   61 (214)
T PRK06620         49 IKGPSSSGKTYLT   61 (214)
T ss_pred             EECCCCCCHHHHH
Confidence            3899999999999

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=88.66  E-value=0.14  Score=44.62  Aligned_cols=13  Identities=54%  Similarity=0.797  Sum_probs=11.8

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      .-||||||||+||
T Consensus       130 VTGpTGSGKSTTl  142 (353)
T COG2805         130 VTGPTGSGKSTTL  142 (353)
T ss_pred             EeCCCCCcHHHHH
Confidence            3599999999999

>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown

Probab=88.63  E-value=0.13  Score=42.88  Aligned_cols=57  Identities=12%  Similarity=0.242  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHH
Q 024439          193 NLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAET  250 (267)
Q Consensus       193 n~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eT  250 (267)
                      ......+.+.+..+.......+-....+...|.+++....++ .|.-+|--++...+.
T Consensus       164 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~i-~IiDLs~~~~~~~~~  220 (229)
T PF01935_consen  164 SSTIRALLRRLERLFRRGSFFSSTPEDIIKLLLDYLNKPGKI-VIIDLSGVDEEVQDI  220 (229)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCcccHHHHhhhhcCCCCCE-EEEECCCCCHHHHHH
Confidence            334455555555555544333334456666777777666665 444666554444333

It contains several conserved aspartates and histidines that could be metal ligands.

>PF13245 AAA_19: Part of AAA domain

Probab=88.19  E-value=0.15  Score=35.05  Aligned_cols=12  Identities=67%  Similarity=0.855  Sum_probs=11.2

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      -|+.|||||+|+
T Consensus        16 ~g~pGtGKT~~~   27 (76)
T PF13245_consen   16 QGPPGTGKTTTL   27 (76)
T ss_pred             ECCCCCCHHHHH
Confidence            589999999999

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones]

Probab=88.12  E-value=0.43  Score=43.05  Aligned_cols=14  Identities=64%  Similarity=0.997  Sum_probs=12.7

Q ss_pred             CcccCCccCccccc
Q 024439            1 MAYGQTGTGKTYTL   14 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl   14 (267)
                      +-||++|||||.|+
T Consensus        46 ~iyG~~GTGKT~~~   59 (366)
T COG1474          46 IIYGPTGTGKTATV   59 (366)
T ss_pred             EEECCCCCCHhHHH
Confidence            46999999999998

>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function

Probab=86.72  E-value=0.26  Score=41.74  Aligned_cols=92  Identities=18%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             cccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCCCeEEEEEEEEecCceeec------CCCCCCCcCcccCC
Q 024439            2 AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDL------LAPEKVNIPINEDP   75 (267)
Q Consensus         2 ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~~EIy~e~v~DL------L~~~~~~~~i~~~~   75 (267)
                      -||..|+|||.++                  ..+.......+    +..+||..+.+.||      |...+...-     
T Consensus        57 L~G~rGtGKSSlV------------------kall~~y~~~G----LRlIev~k~~L~~l~~l~~~l~~~~~kFI-----  109 (249)
T PF05673_consen   57 LWGARGTGKSSLV------------------KALLNEYADQG----LRLIEVSKEDLGDLPELLDLLRDRPYKFI-----  109 (249)
T ss_pred             EecCCCCCHHHHH------------------HHHHHHHhhcC----ceEEEECHHHhccHHHHHHHHhcCCCCEE-----
Confidence            4899999999888                  11222222222    67888888776655      232211111     


Q ss_pred             CCCCccCCCCeEEEe-CCHHHHHHHHHHHhhccccccCCCcCCCCCccceE
Q 024439           76 KTGEVSLPGATVVKL-RDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAIL  125 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v-~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~  125 (267)
                          +++.+|+.-.- .+...+..+|..+...| ....-....|.|-|+|=
T Consensus       110 ----lf~DDLsFe~~d~~yk~LKs~LeGgle~~-P~NvliyATSNRRHLv~  155 (249)
T PF05673_consen  110 ----LFCDDLSFEEGDTEYKALKSVLEGGLEAR-PDNVLIYATSNRRHLVP  155 (249)
T ss_pred             ----EEecCCCCCCCcHHHHHHHHHhcCccccC-CCcEEEEEecchhhccc
Confidence                22333332111 24566777777776544 44455566777878774

>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication

Probab=85.99  E-value=0.22  Score=41.55  Aligned_cols=13  Identities=54%  Similarity=0.836  Sum_probs=12.0

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -||++|+||||-|
T Consensus        39 l~G~~G~GKTHLL   51 (219)
T PF00308_consen   39 LYGPSGLGKTHLL   51 (219)
T ss_dssp             EEESTTSSHHHHH
T ss_pred             EECCCCCCHHHHH
Confidence            4999999999988

DnaA is an ATP- and DNA-binding protein. It binds specifically to 9 bp nucleotide repeats known as dnaA boxes which are found in the chromosome origin of replication (oriC). DnaA is a protein of about 50 kDa that contains two conserved regions: the first is located in the N-terminal half and corresponds to the ATP-binding domain, the second is located in the C-terminal half and could be involved in DNA-binding. The protein may also bind the RNA polymerase beta subunit, the dnaB and dnaZ proteins, and the groE gene products (chaperonins) [].; PDB: 2KJQ_A 2Z4S_A 2Z4R_C 2HCB_B 3R8F_C 1L8Q_A 3SC3_B 3BOS_A.

>PRK06893 DNA replication initiation factor; Validated

Probab=85.91  E-value=0.23  Score=41.62  Aligned_cols=13  Identities=31%  Similarity=0.583  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -||++|+||||.+
T Consensus        44 l~G~~G~GKThL~   56 (229)
T PRK06893         44 IWGGKSSGKSHLL   56 (229)
T ss_pred             EECCCCCCHHHHH
Confidence            4899999999999

>cd00046 DEXDc DEAD-like helicases superfamily

Probab=85.62  E-value=0.23  Score=36.82  Aligned_cols=13  Identities=38%  Similarity=0.493  Sum_probs=12.0

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      .+|++|||||+++
T Consensus         5 i~~~~G~GKT~~~   17 (144)
T cd00046           5 LAAPTGSGKTLAA   17 (144)
T ss_pred             EECCCCCchhHHH
Confidence            5799999999998

A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

>PRK09087 hypothetical protein; Validated

Probab=85.40  E-value=0.25  Score=41.40  Aligned_cols=12  Identities=42%  Similarity=0.553  Sum_probs=11.7

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      ||++||||||.+
T Consensus        50 ~G~~GsGKThLl   61 (226)
T PRK09087         50 AGPVGSGKTHLA   61 (226)
T ss_pred             ECCCCCCHHHHH
Confidence            899999999999

>PRK08727 hypothetical protein; Validated

Probab=85.22  E-value=0.26  Score=41.47  Aligned_cols=13  Identities=46%  Similarity=0.529  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -||++|+||||.+
T Consensus        46 l~G~~G~GKThL~   58 (233)
T PRK08727         46 LSGPAGTGKTHLA   58 (233)
T ss_pred             EECCCCCCHHHHH
Confidence            4899999999999

>smart00382 AAA ATPases associated with a variety of cellular activities

Probab=85.21  E-value=0.26  Score=36.53  Aligned_cols=13  Identities=38%  Similarity=0.529  Sum_probs=11.9

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =+|++|||||+++
T Consensus         7 l~G~~G~GKTtl~   19 (148)
T smart00382        7 IVGPPGSGKTTLA   19 (148)
T ss_pred             EECCCCCcHHHHH
Confidence            3799999999999

AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.

>PRK08084 DNA replication initiation factor; Provisional

Probab=84.92  E-value=0.27  Score=41.39  Aligned_cols=13  Identities=23%  Similarity=0.595  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||++|+||||.+
T Consensus        50 l~Gp~G~GKThLl   62 (235)
T PRK08084         50 LWSREGAGRSHLL   62 (235)
T ss_pred             EECCCCCCHHHHH
Confidence            3899999999999

>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]

Probab=84.57  E-value=0.21  Score=42.54  Aligned_cols=12  Identities=58%  Similarity=0.894  Sum_probs=11.2

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|||||+||
T Consensus        33 iGpSGsGKTTtL   44 (309)
T COG1125          33 IGPSGSGKTTTL   44 (309)
T ss_pred             ECCCCCcHHHHH
Confidence            499999999998

>PRK05642 DNA replication initiation factor; Validated

Probab=83.12  E-value=0.36  Score=40.63  Aligned_cols=13  Identities=31%  Similarity=0.741  Sum_probs=12.0

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||++|+||||-+
T Consensus        50 l~G~~G~GKTHLl   62 (234)
T PRK05642         50 LWGKDGVGRSHLL   62 (234)
T ss_pred             EECCCCCCHHHHH
Confidence            3799999999998

>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B

Probab=83.05  E-value=0.29  Score=36.62  Aligned_cols=13  Identities=38%  Similarity=0.611  Sum_probs=11.2

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -+|++|+|||.++
T Consensus         9 i~G~~G~GKT~~~   21 (131)
T PF13401_consen    9 ISGPPGSGKTTLI   21 (131)
T ss_dssp             EEE-TTSSHHHHH
T ss_pred             EEcCCCCCHHHHH
Confidence            5899999999999

>PF02456 Adeno_IVa2: Adenovirus IVa2 protein; InterPro: IPR003389 Va2 protein can interact with the adenoviral packaging signal and this interaction involves DNA sequences that have previously been demonstrated to be required for packaging []

Probab=82.79  E-value=0.38  Score=41.98  Aligned_cols=13  Identities=54%  Similarity=0.953  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      .||+||||||+-+
T Consensus        92 VYGPTG~GKSqLl  104 (369)
T PF02456_consen   92 VYGPTGSGKSQLL  104 (369)
T ss_pred             EECCCCCCHHHHH
Confidence            5999999999998

During the course of lytic infection, the adenovirus major late promoter (MLP) is induced to high levels after replication of viral DNA has started. IVa2 is a transcriptional activator of the major late promoter [].; GO: 0019083 viral transcription

>cd01131 PilT Pilus retraction ATPase PilT

Probab=82.62  E-value=0.39  Score=39.31  Aligned_cols=12  Identities=58%  Similarity=0.861  Sum_probs=11.3

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|||||+++
T Consensus         7 ~GptGSGKTTll   18 (198)
T cd01131           7 TGPTGSGKSTTL   18 (198)
T ss_pred             ECCCCCCHHHHH
Confidence            599999999999

PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

>PF13555 AAA_29: P-loop containing region of AAA domain

Probab=81.65  E-value=0.44  Score=31.30  Aligned_cols=12  Identities=42%  Similarity=0.700  Sum_probs=11.0

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|||||..|
T Consensus        29 ~G~nGsGKSTll   40 (62)
T PF13555_consen   29 TGPNGSGKSTLL   40 (62)
T ss_pred             ECCCCCCHHHHH
Confidence            699999999888

>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]

Probab=81.13  E-value=0.46  Score=38.93  Aligned_cols=12  Identities=58%  Similarity=0.836  Sum_probs=11.5

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|+|||.|+
T Consensus         7 vGptGvGKTTt~   18 (196)
T PF00448_consen    7 VGPTGVGKTTTI   18 (196)
T ss_dssp             EESTTSSHHHHH
T ss_pred             ECCCCCchHhHH
Confidence            699999999999

SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....

>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport

Probab=80.84  E-value=0.49  Score=35.19  Aligned_cols=13  Identities=46%  Similarity=0.516  Sum_probs=11.9

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||+.|+|||+..
T Consensus         3 l~G~~G~GKT~l~   15 (132)
T PF00004_consen    3 LHGPPGTGKTTLA   15 (132)
T ss_dssp             EESSTTSSHHHHH
T ss_pred             EECcCCCCeeHHH
Confidence            3899999999998

Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....

>KOG0926 consensus DEAH-box RNA helicase [RNA processing and modification; Translation, ribosomal structure and biogenesis]

Probab=80.83  E-value=0.76  Score=45.07  Aligned_cols=27  Identities=30%  Similarity=0.614  Sum_probs=20.2

Q ss_pred             cccCCccCccccc------cccCCCCCCCcChH
Q 024439            2 AYGQTGTGKTYTL------GRLGKDDASERGIM   28 (267)
Q Consensus         2 ayG~tgSGKT~Tl------~G~~~~~~~~~Gli   28 (267)
                      -+|+||||||+-+      -|++..+..++|+|
T Consensus       276 IcGeTGsGKTTQvPQFLYEAGf~s~~~~~~gmI  308 (1172)
T KOG0926|consen  276 ICGETGSGKTTQVPQFLYEAGFASEQSSSPGMI  308 (1172)
T ss_pred             EecCCCCCccccchHHHHHcccCCccCCCCCee
Confidence            4799999999998      34444555668887

>KOG0989 consensus Replication factor C, subunit RFC4 [Replication, recombination and repair]

Probab=80.77  E-value=0.74  Score=40.20  Aligned_cols=13  Identities=62%  Similarity=0.841  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =|||.|+|||.|.
T Consensus        62 FyGPpGTGKTSta   74 (346)
T KOG0989|consen   62 FYGPPGTGKTSTA   74 (346)
T ss_pred             eeCCCCCcHhHHH
Confidence            3999999999998

>PF13086 AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV_A 2XZP_A 2GK6_A 2GK7_A 2GJK_A

Probab=80.64  E-value=0.49  Score=38.89  Aligned_cols=12  Identities=67%  Similarity=0.855  Sum_probs=10.2

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      -||.|||||+|+
T Consensus        23 ~GpPGTGKT~~l   34 (236)
T PF13086_consen   23 QGPPGTGKTTTL   34 (236)
T ss_dssp             E-STTSSHHHHH
T ss_pred             ECCCCCChHHHH
Confidence            599999999998

>KOG2543 consensus Origin recognition complex, subunit 5 [Replication, recombination and repair]

Probab=80.63  E-value=0.71  Score=41.52  Aligned_cols=13  Identities=62%  Similarity=1.178  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -||.+||||||++
T Consensus        35 iyG~sgTGKT~~~   47 (438)
T KOG2543|consen   35 IYGHSGTGKTYLV   47 (438)
T ss_pred             EeccCCCchhHHH
Confidence            4999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	267
1goj_A	355	Structure Of A Fast Kinesin: Implications For Atpas		2e-47
1mkj_A	349	Human Kinesin Motor Domain With Docked Neck Linker		3e-46
1bg2_A	325	Human Ubiquitous Kinesin Motor Domain Length = 325		3e-46
4atx_C	340	Rigor Kinesin Motor Domain With An Ordered Neck-Lin		9e-46
2y5w_A	365	Crystal Structure Of Drosophila Melanogaster Kinesi		5e-45
3b6u_A	372	Crystal Structure Of The Motor Domain Of Human Kine		2e-42
2vvg_A	350	Crystal Structure Of The G.Intestinalis Kinesin 2 G		2e-38
1ia0_K	394	Kif1a Head-Microtubule Complex Structure In Atp-For		5e-37
1i5s_A	367	Crystal Structure Of The Kif1a Motor Domain Complex		5e-37
1i6i_A	366	Crystal Structure Of The Kif1a Motor Domain Complex		6e-37
1vfv_A	366	Crystal Structure Of The Kif1a Motor Domain Complex		8e-37
2h58_A	330	Crystal Structure Of The Kifc3 Motor Domain In Comp		2e-35
1sdm_A	369	Crystal Structure Of Kinesin-Like Calmodulin Bindin		2e-34
3b6v_A	395	Crystal Structure Of The Motor Domain Of Human Kine		3e-34
3bfn_A	388	Crystal Structure Of The Motor Domain Of Human Kine		7e-34
3nwn_A	359	Crystal Structure Of The Human Kif9 Motor Domain In		9e-34
1x88_A	359	Human Eg5 Motor Domain Bound To Mg-Adp And Monastro		3e-33
4aqv_C	373	Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma		4e-33
4a1z_A	368	Eg5-1 Length = 368		4e-33
3zcw_A	348	Eg5 - New Allosteric Binding Site Length = 348		4e-33
4a28_A	368	Eg5-2 Length = 368		4e-33
3hqd_A	369	Human Kinesin Eg5 Motor Domain In Complex With Ampp		4e-33
1q0b_A	367	Crystal Structure Of The Motor Protein Ksp In Compl		4e-33
1ii6_A	368	Crystal Structure Of The Mitotic Kinesin Eg5 In Com		4e-33
4ap0_A	370	The Mitotic Kinesin Eg5 In Complex With Mg-Adp And		5e-33
3h4s_A	386	Structure Of The Complex Of A Mitotic Kinesin With		6e-33
4a14_A	344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		8e-33
3lre_A	355	Crystal Structure Analysis Of Human Kinesin-8 Motor		8e-33
2wbe_C	373	Kinesin-5-Tubulin Complex With Amppnp Length = 373		9e-33
2xt3_A	344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		3e-32
3gbj_A	354	Crystal Structure Of The Motor Domain Of Kinesin Ki		2e-31
2owm_A	443	Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3		1e-30
1t5c_A	349	Crystal Structure Of The Motor Domain Of Human Kine		3e-27
2rep_A	376	Crystal Structure Of The Motor Domain Of Human Kine		3e-25
2gry_A	420	Crystal Structure Of The Human Kif2 Motor Domain In		2e-24
4h1g_A	715	Structure Of Candida Albicans Kar3 Motor Domain Fus		4e-24
3edl_D	331	Kinesin13-Microtubule Ring Complex Length = 331		1e-22
1v8j_A	410	The Crystal Structure Of The Minimal Functional Dom		1e-22
3pxn_A	344	Crystal Structure Of The Drosophila Kinesin Family		3e-22
3dc4_A	344	Crystal Structure Of The Drosophila Kinesin Family		3e-22
2heh_A	387	Crystal Structure Of The Kif2c Motor Domain (Casp T		4e-22
3t0q_A	349	Motor Domain Structure Of The Kar3-Like Kinesin Fro		7e-22
4gkr_A	371	Structure Of The C-Terminal Motor Domain Of Kar3 Fr		2e-21
1ry6_A	360	Crystal Structure Of Internal Kinesin Motor Domain		1e-20
4etp_A	403	C-Terminal Motor And Motor Homology Domain Of Kar3v		6e-19
1f9t_A	358	Crystal Structures Of Kinesin Mutants Reveal A Sign		2e-18
3kar_A	346	The Motor Domain Of Kinesin-Like Protein Kar3, A Sa		2e-18
1cz7_A	406	The Crystal Structure Of A Minus-End Directed Micro		1e-17
1f9w_A	347	Crystal Structures Of Mutants Reveal A Signalling P		1e-17
3u06_A	412	Crystal Structure Of The Kinesin-14 Ncdg347d Length		1e-17
1f9u_A	347	Crystal Structures Of Mutants Reveal A Signalling P		1e-17
2ncd_A	420	Ncd (Non-Claret Disjunctional) Dimer From D. Melano		1e-17
1f9v_A	347	Crystal Structures Of Mutants Reveal A Signalling P		2e-17
2kin_B	100	Kinesin (Monomeric) From Rattus Norvegicus Length =		2e-17
3l1c_A	383	Kinesin-14 Protein Ncd, T436s Mutant Length = 383		3e-17
3kin_B	117	Kinesin (Dimeric) From Rattus Norvegicus Length = 1		4e-17
1n6m_A	409	Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY		6e-17
2kin_A	238	Kinesin (Monomeric) From Rattus Norvegicus Length =		5e-16

>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355

Iteration: 1
 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 156/265 (58%), Gaps = 27/265 (10%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYME 56
            AYGQTG GK+YT+     DD   RG++ R +E I +S+  ++ ++E    VSY+++YME
Sbjct: 85  FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYME 144
Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLNT 116
            I+DLLAP+  N+P++E+   G V + G   +              G   R  A T +N 
Sbjct: 145 RIRDLLAPQNDNLPVHEEKNRG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQ 203
Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I V+            IT +  +T +   G          +L +VDLAGSE++
Sbjct: 204 ESSRSHSIFVI-----------TITQKNVETGSAKSG----------QLFLVDLAGSEKV 242
Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  LEEAK IN SLS+LG  INAL +  S H+P RDSKLTR+L++S GG++RT+
Sbjct: 243 GKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT 302
Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           LII   PS+ N AET ST+ FG R 
Sbjct: 303 LIINCSPSSYNDAETLSTLRFGMRA 327

>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349

Iteration: 1
 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/265 (40%), Positives = 158/265 (59%), Gaps = 29/265 (10%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GKT+T+ G+L   D    GI+ R ++DI + +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKTHTMEGKL--HDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 139
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T                G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLSVHED-KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 198
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++           E   T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINVKQ-----------ENTQTEQKLSG----------KLYLVDLAGSEK 237
Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 297
Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++I   PS+ N +ET ST++FGQR 
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRA 322

>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325

Iteration: 1
 Score =  181 bits (459), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/265 (40%), Positives = 158/265 (59%), Gaps = 29/265 (10%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GKT+T+ G+L   D    GI+ R ++DI + +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKTHTMEGKL--HDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 139
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T                G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLSVHED-KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 198
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++           E   T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINVKQ-----------ENTQTEQKLSG----------KLYLVDLAGSEK 237
Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 297
Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++I   PS+ N +ET ST++FGQR 
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRA 322

>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340

Iteration: 1
 Score =  180 bits (456), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 157/265 (59%), Gaps = 29/265 (10%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GK +T+ G+L   D    GI+ R ++DI + +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKNHTMEGKL--HDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 139
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T                G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLSVHED-KNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 198
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++           E   T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINVKQ-----------ENTQTEQKLSG----------KLYLVDLAGSEK 237
Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 238 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 297
Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++I   PS+ N +ET ST++FGQR 
Sbjct: 298 IVICCSPSSYNESETKSTLLFGQRA 322

>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365

Iteration: 1
 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/273 (40%), Positives = 167/273 (61%), Gaps = 30/273 (10%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDI---ISSMSVTSD-SVEVSYLQLYM 55
            AYGQT +GKT+T+ G +G  D+ ++GI+ R + DI   I +M V  +  ++VSY ++YM
Sbjct: 89  FAYGQTSSGKTHTMEGVIG--DSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYM 146
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           + I+DLL   KVN+ ++ED K     + GAT                G+ NRH A T +N
Sbjct: 147 DKIRDLLDVSKVNLSVHED-KNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMN 205
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH++ ++ +++           E  + + +L G          KL +VDLAGSE+
Sbjct: 206 EHSSRSHSVFLINVKQ-----------ENLENQKKLSG----------KLYLVDLAGSEK 244
Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSART 234
           + K+G+EG +L+EAK IN SLS+LG  I+ALA+ N  HIP RDSKLTR+L++S GG+ART
Sbjct: 245 VSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNART 304
Query: 235 SLIITVGPSARNHAETTSTIMFGQRGSIRISVV 267
           +++I   P++ N +ET ST+ FG+R     +VV
Sbjct: 305 TIVICCSPASFNESETKSTLDFGRRAKTVKNVV 337

>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372

Iteration: 1
 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 151/265 (56%), Gaps = 25/265 (9%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS---VEVSYLQLYMES 57
            AYGQTGTGKTYT+  + + D  +RG++  + + I + +S + +    V  SYL++Y E 
Sbjct: 106 FAYGQTGTGKTYTMEGI-RGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEE 164
Query: 58  IQDLLAPEKVN-IPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLNT 116
           I+DLL+ ++   + + E P TG V +   +               VG  NR    T +N 
Sbjct: 165 IRDLLSKDQTKRLELKERPDTG-VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNE 223
Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSHAI V+ I  S                  L G+NH+   R  KL +VDLAGSER 
Sbjct: 224 HSSRSHAIFVITIECS---------------EVGLDGENHI---RVGKLNLVDLAGSERQ 265
Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G++G  L+EA  INLSLS+LG  I+AL +  S HIP RDSKLTRLL+DS GG+A+T 
Sbjct: 266 AKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTV 325
Query: 236 LIITVGPSARNHAETTSTIMFGQRG 260
           ++  VGP++ N  ET +T+ +  R 
Sbjct: 326 MVANVGPASYNVEETLTTLRYANRA 350

>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350

Iteration: 1
 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 147/261 (56%), Gaps = 23/261 (8%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEV-SYLQLYMESIQ 59
            AYGQTG GKT+T+G   K++        + L D I+S S   + + + SYL+LY E I+
Sbjct: 94  FAYGQTGAGKTWTMGG-NKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIR 152
Query: 60  DLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLNTESS 119
           DL+      +P+ ED KT  + + G ++ +             G  NRH A T++N  SS
Sbjct: 153 DLIK-NNTKLPLKED-KTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSS 210
Query: 120 RSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKS 179
           RSH+I +V I  S  E+I     E K+            ++R  KL +VDLAGSER  K+
Sbjct: 211 RSHSIFMVRIECS--EVI-----ENKE------------VIRVGKLNLVDLAGSERQSKT 251
Query: 180 GSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLIIT 239
           G+ G  L E   INLSLS+LG  I+ L E + HIP RDSKLTRLL+DS GG+++T +   
Sbjct: 252 GATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCAN 311
Query: 240 VGPSARNHAETTSTIMFGQRG 260
           + P++ N+ ET ST+ +  R 
Sbjct: 312 ISPASTNYDETMSTLRYADRA 332

>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394

Iteration: 1
 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 155/285 (54%), Gaps = 39/285 (13%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T++     SVEVSY+++Y 
Sbjct: 110 FAYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYC 167
Query: 56  ESIQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKL 114
           E ++DLL P+ K N+ + E P  G   +   + +              G   R  A T +
Sbjct: 168 ERVRDLLNPKNKGNLRVREHPLLGPY-VEDLSKLAVTSYNDIQDLMDSGNKARTVAATNM 226
Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +   +  H+    IT+E                 + SK+ +VDLAGSE
Sbjct: 227 NETSSRSHAVFNIIFTQKRHDAETNITTE-----------------KVSKISLVDLAGSE 269
Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------------NSPHIPTRDSKLTR 222
           R D +G++G  L+E   IN SL++LGK I+ALAE             +  IP RDS LT 
Sbjct: 270 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 329
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG-SIRISV 266
           LLR++ GG++RT+++  + P+  N+ ET ST+ +  R   IR +V
Sbjct: 330 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTV 374

>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367

Iteration: 1
 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 151/278 (54%), Gaps = 38/278 (13%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T++     SVEVSY+++Y 
Sbjct: 94  FAYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYC 151
Query: 56  ESIQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKL 114
           E ++DLL P+ K N+ + E P  G   +   + +              G   R  A T +
Sbjct: 152 ERVRDLLNPKNKGNLRVREHPLLGPY-VEDLSKLAVTSYNDIQDLMDSGNKARTVAATNM 210
Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +   +  H+    IT+E                 + SK+ +VDLAGSE
Sbjct: 211 NETSSRSHAVFNIIFTQKRHDAETNITTE-----------------KVSKISLVDLAGSE 253
Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------------NSPHIPTRDSKLTR 222
           R D +G++G  L+E   IN SL++LGK I+ALAE             +  IP RDS LT 
Sbjct: 254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 313
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           LLR++ GG++RT+++  + P+  N+ ET ST+ +  R 
Sbjct: 314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRA 351

>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366

Iteration: 1
 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 155/285 (54%), Gaps = 39/285 (13%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T++     SVEVSY+++Y 
Sbjct: 94  FAYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYC 151
Query: 56  ESIQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKL 114
           E ++DLL P+ K N+ + E P  G   +   + +              G   R  A T +
Sbjct: 152 ERVRDLLNPKNKGNLRVREHPLLGPY-VEDLSKLAVTSYNDIQDLMDSGNKARTVAATNM 210
Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +   +  H+    IT+E                 + SK+ +VDLAGSE
Sbjct: 211 NETSSRSHAVFNIIFTQKRHDAETNITTE-----------------KVSKISLVDLAGSE 253
Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------------NSPHIPTRDSKLTR 222
           R D +G++G  L+E   IN SL++LGK I+ALAE             +  IP RDS LT 
Sbjct: 254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 313
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG-SIRISV 266
           LLR++ GG++RT+++  + P+  N+ ET ST+ +  R   IR +V
Sbjct: 314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTV 358

>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366

Iteration: 1
 Score =  150 bits (379), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 155/285 (54%), Gaps = 39/285 (13%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T++     SVEVSY+++Y 
Sbjct: 94  FAYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYC 151
Query: 56  ESIQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKL 114
           E ++DLL P+ K N+ + E P  G   +   + +              G   R  A T +
Sbjct: 152 ERVRDLLNPKNKGNLRVREHPLLGPY-VEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNM 210
Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +   +  H+    IT+E                 + SK+ +VDLAGSE
Sbjct: 211 NETSSRSHAVFNIIFTQKRHDAETNITTE-----------------KVSKISLVDLAGSE 253
Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------------NSPHIPTRDSKLTR 222
           R D +G++G  L+E   IN SL++LGK I+ALAE             +  IP RDS LT 
Sbjct: 254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 313
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG-SIRISV 266
           LLR++ GG++RT+++  + P+  N+ ET ST+ +  R   IR +V
Sbjct: 314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTV 358

>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330

Iteration: 1
 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 137/266 (51%), Gaps = 33/266 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYME 56
            AYGQTG GKTYT+    +  A   GI  RAL+ + S +   +   E    VS  ++Y E
Sbjct: 85  FAYGQTGAGKTYTM----EGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNE 140
Query: 57  SIQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            ++DLL  E   K+ I +  D  +G++ +PG T  +             G  NR    T 
Sbjct: 141 VLRDLLGKEPQEKLEIRLCPD-GSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTN 199
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           LN  SSRSHA+L+V +R                       D    L    KL +VDLAGS
Sbjct: 200 LNEHSSRSHALLIVTVRGV---------------------DCSTGLRTTGKLNLVDLAGS 238
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           ER+ KSG+EG  L EA+ IN SLS+LG  I AL     H+P R+SKLT LL+DS  G ++
Sbjct: 239 ERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSK 298
Query: 234 TSLIITVGPSARNHAETTSTIMFGQR 259
           T +++ V P  +N +ET  ++ F +R
Sbjct: 299 TLMVVQVSPVEKNTSETLYSLKFAER 324

>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 33/266 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
            AYGQTG+GKT+T+   G D  S  G+  RA+ ++   M   S+    S++   ++LY +
Sbjct: 84  FAYGQTGSGKTFTI--YGAD--SNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQD 139
Query: 57  SIQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           ++ DLL P+   ++ + I +D K G VS+   TVV              G   RH   T 
Sbjct: 140 TLVDLLLPKQAKRLKLDIKKDSK-GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTL 198
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N +SSRSH I+ V I             E  + +T+         + + KL  VDLAGS
Sbjct: 199 MNEQSSRSHLIVSVII-------------ESTNLQTQA--------IARGKLSFVDLAGS 237
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           ER+ KSGS G  L+EA+ IN SLS+LG  I+AL+  + HIP R+ KLT L+ DS GG+A+
Sbjct: 238 ERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK 297
Query: 234 TSLIITVGPSARNHAETTSTIMFGQR 259
           T + + + P+  N  ET +++ +  R
Sbjct: 298 TLMFVNISPAESNLDETHNSLTYASR 323

>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395

Iteration: 1
 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 151/291 (51%), Gaps = 53/291 (18%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS---VEVSYLQLYMES 57
            AYGQTGTGKTYT+     +    RG++  A E I + +S + +    V  SYL++Y E 
Sbjct: 106 FAYGQTGTGKTYTMQGTWVE-PELRGVIPNAFEHIFTHISRSQNQQYLVRASYLEIYQEE 164
Query: 58  IQDLLAPEK-VNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLNT 116
           I+DLL+ E    + + E+P+TG V +   +               +G   R   +T +N 
Sbjct: 165 IRDLLSKEPGKRLELKENPETG-VYIKDLSSFVTKNVKEIEHVMNLGNQTRAVGSTHMNE 223
Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSHAI ++ +  S           E+ +     G +H+   R  KL +VDLAGSER 
Sbjct: 224 VSSRSHAIFIITVECS-----------ERGS----DGQDHI---RVGKLNLVDLAGSERQ 265
Query: 177 DKSG--------------------------SEGPLLEEAKFINLSLSSLGKCINALAEN- 209
           +K+G                           E P  +EA  INLSLS+LG  I ALA N 
Sbjct: 266 NKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERP--KEASKINLSLSALGNVIAALAGNR 323
Query: 210 SPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           S HIP RDSKLTRLL+DS GG+A+T ++ T+GP++ ++ E+ ST+ F  R 
Sbjct: 324 STHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRA 374

>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388

Iteration: 1
 Score =  140 bits (353), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 141/267 (52%), Gaps = 34/267 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDII-------SSMSVTSDSVEVSYLQL 53
           +AYG TG GKT+T+  LG  +  + G++ RAL D++       +     + SV +SYL++
Sbjct: 103 LAYGPTGAGKTHTM--LGSPE--QPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEI 158
Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           Y E + DLL P   ++ I ED + G + +PG +                   NR    T+
Sbjct: 159 YQEKVLDLLDPASGDLVIREDCR-GNILIPGLSQKPISSFADFERHFLPASRNRTVGATR 217
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPL-VRKSKLLIVDLAG 172
           LN  SSRSHA+L+V +                D R  L      P   R+ KL ++DLAG
Sbjct: 218 LNQRSSRSHAVLLVKV----------------DQRERL-----APFRQREGKLYLIDLAG 256
Query: 173 SERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232
           SE   ++G++G  L+E+  IN SL  LGK ++AL +  P +P RDSKLTRLL+DS GGSA
Sbjct: 257 SEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSA 316
Query: 233 RTSLIITVGPSARNHAETTSTIMFGQR 259
            + LI  + P  R + +T S + F  R
Sbjct: 317 HSILIANIAPERRFYLDTVSALNFAAR 343

>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359

Iteration: 1
 Score =  140 bits (352), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 139/270 (51%), Gaps = 34/270 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGK-DDASERGIMVRALEDI---ISSMSVTSDSVEVSYLQLYME 56
           M YGQTG GKTYT+  +G  ++   RGI+ RAL+ +   I      + +V VSYL++Y E
Sbjct: 109 MCYGQTGAGKTYTM--MGATENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNE 166
Query: 57  SIQDLLA------PEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAA 110
           S+ DLL+      P    + I E+P+   V + G +V               GE NR  A
Sbjct: 167 SLFDLLSTLPYVGPSVTPMTIVENPQG--VFIKGLSVHLTSQEEDAFSLLFEGETNRIIA 224
Query: 111 NTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDL 170
           +  +N  SSRSH I  +Y+     E   +  SEEK                 SK+ +VDL
Sbjct: 225 SHTMNKNSSRSHCIFTIYL-----EAHSRTLSEEKYI--------------TSKINLVDL 265
Query: 171 AGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFG 229
           AGSER+ KSGSEG +L+EA +IN SLS L + I AL +    HIP R  KLT  L+DS G
Sbjct: 266 AGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLG 325
Query: 230 GSARTSLIITVGPSARNHAETTSTIMFGQR 259
           G+    L+  +   A    ET S++ F  R
Sbjct: 326 GNCNMVLVTNIYGEAAQLEETLSSLRFASR 355

>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359

Iteration: 1
 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 93  FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 150
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 151 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 210
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 211 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 252
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 253 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 312
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 313 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 347

>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373

Iteration: 1
 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 102 FAYGQTGTGKTFTME--GERSPNEEYCWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 159
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 160 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 219
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 220 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 261
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 262 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 321
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 322 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 356

>pdb|4A1Z|A Chain A, Eg5-1 Length = 368

Iteration: 1
 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 102 FAYGQTGTGKTFTME--GERSPNEEYTWEEVPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 159
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 160 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 219
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 220 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 261
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 262 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 321
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 322 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 356

>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348

Iteration: 1
 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 87  FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 144
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 145 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 204
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 205 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 246
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 247 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 306
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 307 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 341

>pdb|4A28|A Chain A, Eg5-2 Length = 368

Iteration: 1
 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 102 FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLDGIIPRTLHQIFEKLTDNGTEFSVKVS 159
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 160 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 219
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 220 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 261
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 262 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 321
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 322 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 356

>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 102 FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 159
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 160 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 219
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 220 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 261
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 262 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 321
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 322 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 356

>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 101 FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 158
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 159 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 218
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 219 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 260
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 261 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 320
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 321 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 355

>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 102 FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 159
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 160 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 219
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 220 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 261
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 262 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 321
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 322 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 356

>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370

Iteration: 1
 Score =  137 bits (346), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 140/275 (50%), Gaps = 35/275 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER---------GIMVRALEDIISSMSV--TSDSVEVS 49
            AYGQTGTGKT+T+   G+   +E          GI+ R L  I   ++   T  SV+VS
Sbjct: 104 FAYGQTGTGKTFTME--GERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS 161
Query: 50  YLQLYMESIQDLLAPEK---VNIPINEDPKTGE-VSLPGATVVKXXXXXXXXXXXXVGEV 105
            L++Y E + DLL P       + + +DP+    V + G   +              G  
Sbjct: 162 LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAA 221
Query: 106 NRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKL 165
            R  A T +N  SSRSH++  V    ++H     I  EE              LV+  KL
Sbjct: 222 KRTTAATLMNAYSSRSHSVFSV----TIHMKETTIDGEE--------------LVKIGKL 263
Query: 166 LIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
            +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+
Sbjct: 264 NLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQ 323
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           DS GG  RTS+I T+ P++ N  ET ST+ +  R 
Sbjct: 324 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRA 358

>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386

Iteration: 1
 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 142/266 (53%), Gaps = 33/266 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
            AYGQTG+GKT+T+   G +  S  G+  RA +++ + +   S     S++   ++LY +
Sbjct: 92  FAYGQTGSGKTFTI--YGHE--SNPGLTPRATKELFNILKRDSKRFSFSLKAYMVELYQD 147
Query: 57  SIQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           ++ DLL P+   ++ + I +D K G V +   T +              G   RH + T 
Sbjct: 148 TLVDLLLPKSARRLKLEIKKDSK-GMVFVENVTTIPISTLEELRMILERGSERRHVSGTN 206
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N ESSRSH IL V I             E  D +T+           + KL  VDLAGS
Sbjct: 207 MNEESSRSHLILSVVI-------------ESIDLQTQSAA--------RGKLSFVDLAGS 245
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           ER+ KSGS G  L+EA+ IN SLS+LG  I AL+  + HIP R+ KLT L+ DS GG+A+
Sbjct: 246 ERVKKSGSAGNQLKEAQSINKSLSALGDVIGALSSGNQHIPYRNHKLTMLMSDSLGGNAK 305
Query: 234 TSLIITVGPSARNHAETTSTIMFGQR 259
           T + + V P+  N  ET +++++  R
Sbjct: 306 TLMFVNVSPAESNLDETYNSLLYASR 331

>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344

Iteration: 1
 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 139/269 (51%), Gaps = 24/269 (8%)
Query: 1   MAYGQTGTGKTYTLGR--LGKDDASERGIMVRALED---IISSMSVTSDSVEVSYLQLYM 55
            AYGQTG+GKTYT+G   +      E+GI+ RA+ +   +I    +    V VSYL++Y 
Sbjct: 88  FAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYK 147
Query: 56  ESIQDLL--APEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           E  +DLL       +I + ED + G V L G   V             +G   RH   T 
Sbjct: 148 EEFRDLLEVGTASRDIQLREDER-GNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATH 206
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           LN  SSRSH +  V + +               +R   P    + +   SK   VDLAGS
Sbjct: 207 LNHLSSRSHTVFTVTLEQR----------GRAPSRLPRPAPGQLLV---SKFHFVDLAGS 253
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTRLLRDSFGG 230
           ER+ K+GS G  L+E+  IN SL +LG  I+AL +      HIP RDSK+TR+L+DS GG
Sbjct: 254 ERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGG 313
Query: 231 SARTSLIITVGPSARNHAETTSTIMFGQR 259
           +A+T +I  V PS+ +  ET +T+ +  R
Sbjct: 314 NAKTVMIACVSPSSSDFDETLNTLNYASR 342

>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355

Iteration: 1
 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 143/270 (52%), Gaps = 37/270 (13%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
           +AYG TG GKT+T+  LG  D  E G+M   +  +   M    +    S  VSYL++Y E
Sbjct: 110 LAYGATGAGKTHTM--LGSAD--EPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNE 165
Query: 57  SIQDLLAPEKVN---IPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            I+DLL    VN   + + ED + G V + G T+ +             G  NR    T 
Sbjct: 166 QIRDLL----VNSGPLAVREDTQKG-VVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTD 220
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N  SSRSHA+  +Y+R+      DK  S  ++             VR +K+ ++DLAGS
Sbjct: 221 MNATSSRSHAVFQIYLRQQ-----DKTASINQN-------------VRIAKMSLIDLAGS 262
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRLLRDSFGG 230
           ER   SG++G    E   IN SL +LG  INALA++   + HIP R+SKLTRLL+DS GG
Sbjct: 263 ERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGG 322
Query: 231 SARTSLIITVGPSARNHAETTSTIMFGQRG 260
           + +T +I  V PS+  + +T +T+ +  R 
Sbjct: 323 NCQTIMIAAVSPSSVFYDDTYNTLKYANRA 352

>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373

Iteration: 1
 Score =  137 bits (344), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 148/275 (53%), Gaps = 36/275 (13%)
Query: 1   MAYGQTGTGKTYTLG-------RLGKDDASERGIMVRALEDIISSMSV--TSDSVEVSYL 51
            AYGQTGTGKT+T+        +   +D S+ GI+ RAL  +   + +     ++ +SYL
Sbjct: 105 FAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYL 164
Query: 52  QLYMESIQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRH 108
           +LY E + DLL+ +   K+ I  ++  K G V + G   +              G+  R 
Sbjct: 165 ELYNEELCDLLSTDDTTKIRI-FDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRK 223
Query: 109 AANTKLNTESSRSHAI--LVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
            A T +N +SSRSH +  +VV+IR       + I  E+              +++  KL 
Sbjct: 224 TATTLMNAQSSRSHTVFSIVVHIRE------NGIEGED--------------MLKIGKLN 263
Query: 167 IVDLAGSERIDKSGSE-GPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR 225
           +VDLAGSE + K+G+E G  + E   IN SL +LG+ I AL + +PH+P R+SKLTRLL+
Sbjct: 264 LVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQ 323
Query: 226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
           +S GG  +TS+I T+ P  ++  ET ST+ +  R 
Sbjct: 324 ESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRA 358

>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344

Iteration: 1
 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 140/269 (52%), Gaps = 24/269 (8%)
Query: 1   MAYGQTGTGKTYTLGR--LGKDDASERGIMVRALED---IISSMSVTSDSVEVSYLQLYM 55
            AYGQTG+GKTYT+G   +      E+GI+ RA+ +   +I    +    V VSYL++Y 
Sbjct: 88  FAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYK 147
Query: 56  ESIQDLL--APEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           E  +DLL       +I + ED + G V L G   V             +G   RH   T 
Sbjct: 148 EEFRDLLEVGTASRDIQLREDER-GNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATH 206
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           LN  SSRSH +  V +++               +R   P    + +   SK   VDLAGS
Sbjct: 207 LNHLSSRSHTVFTVTLKQR----------GRAPSRLPRPAPGQLLV---SKFHFVDLAGS 253
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTRLLRDSFGG 230
           ER+ K+GS G L +E+  IN SL +LG  I+AL +      +IP RDSK+TR+L+DS GG
Sbjct: 254 ERVLKTGSTGELRKESIQINSSLLALGNVISALGDPQRRGSNIPYRDSKITRILKDSLGG 313
Query: 231 SARTSLIITVGPSARNHAETTSTIMFGQR 259
           +A+T +I  V PS+ +  ET +T+ +  R
Sbjct: 314 NAKTVMIACVSPSSSDFDETLNTLNYASR 342

>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 35/273 (12%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYM 55
            AYGQTG+GK+YT+  +G  D  + G++ R    +            S  VEVSY+++Y 
Sbjct: 97  FAYGQTGSGKSYTM--MGTAD--QPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYN 152
Query: 56  ESIQDLLAPE--KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           E ++DLL P+  +  + + E    G   + G + +              G  +R  A T 
Sbjct: 153 EKVRDLLDPKGSRQTLKVREHSVLGPY-VDGLSKLAVTSYKDIESLMSEGNKSRTVAATN 211
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N ESSRSHA+  + +  +++++    + E                 +  KL +VDLAGS
Sbjct: 212 MNEESSRSHAVFKITLTHTLYDVKSGTSGE-----------------KVGKLSLVDLAGS 254
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP------HIPTRDSKLTRLLRDS 227
           ER  K+G+ G  L+E   IN SL++LG  I+ALA+ S        +P RDS LT LL+DS
Sbjct: 255 ERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDS 314
Query: 228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRG 260
            GG+++T+++ TV P+A N+ ET ST+ +  R 
Sbjct: 315 LGGNSKTAMVATVSPAADNYDETLSTLRYADRA 347

>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443

Iteration: 1
 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 153/302 (50%), Gaps = 59/302 (19%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-------SVEVSYLQL 53
            AYGQTG+GK+YT+  +G  D  + G++ R  ED+   ++   D       +V+VSY ++
Sbjct: 141 FAYGQTGSGKSYTM--MGTPD--QPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEV 196
Query: 54  YMESIQDLLAPEKVNIP-----INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRH 108
           Y E ++DLLAP   N P     + E P  G   +   T V             +G+ +R 
Sbjct: 197 YNEHVRDLLAPVVPNKPPYYLKVRESPTEGPY-VKDLTEVPVRGLEEIIRWMRIGDGSRT 255
Query: 109 AANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIV 168
            A+TK+N  SSRSHA+  + +++  H++       E D  TE          R S++ +V
Sbjct: 256 VASTKMNDTSSRSHAVFTIMLKQIHHDL-------ETDDTTE----------RSSRIRLV 298
Query: 169 DLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE--------NSP--------- 211
           DLAGSER   + + G  L E   IN SL++LG+ I ALA+        +SP         
Sbjct: 299 DLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTP 358
Query: 212 -----HIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFG-QRGSIRIS 265
                 +P RDS LT LL+DS GG+++T++I  + P+  ++ ET ST+ +  Q   IR  
Sbjct: 359 GPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTR 416
Query: 266 VV 267
            V
Sbjct: 417 AV 418

>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 134/264 (50%), Gaps = 30/264 (11%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS---VEVSYLQLYMES 57
            AYGQT +GKTYT+  +G +D    G++ RA+ DI   +    D    + VSY+++Y E+
Sbjct: 82  FAYGQTASGKTYTM--MGSED--HLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNET 137
Query: 58  IQDLLAPEKVNIP--INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           I DLL   +   P  I ED     V +   T                GE +RH   TK+N
Sbjct: 138 ITDLLCGTQKMKPLIIREDVNRN-VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMN 196
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH I      R + E      S EK   +   G      V+ S L +VDLAGSER
Sbjct: 197 QRSSRSHTIF-----RMILE------SREKGEPSNCEGS-----VKVSHLNLVDLAGSER 240
Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGSAR 233
             ++G+ G  L+E   IN SL  LG+ I  L++      I  RDSKLTR+L++S GG+A+
Sbjct: 241 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAK 300
Query: 234 TSLIITVGPSARNHAETTSTIMFG 257
           T +I T+ P + +  ET + + F 
Sbjct: 301 TRIICTITPVSFD--ETLTALQFA 322

>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 38/275 (13%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIIS-----SMSVTSDSVEVSYLQLY 54
            AYGQTG+GKT+T+ G  G D   E G++ RAL  + S     S    + S   SY+++Y
Sbjct: 120 FAYGQTGSGKTFTMEGGPGGDPQLE-GLIPRALRHLFSVAQELSGQGWTYSFVASYVEIY 178
Query: 55  MESIQDLLAPEKVNIPINE------DPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRH 108
            E+++DLLA         E       P + E+++  A  V             +   NR 
Sbjct: 179 NETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRA 238
Query: 109 AANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIV 168
            A T  N  SSRSH++  + I            S E  +R          L   + L +V
Sbjct: 239 VARTAQNERSSRSHSVFQLQI------------SGEHSSRG---------LQCGAPLSLV 277
Query: 169 DLAGSERIDKSGSEGP----LLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLL 224
           DLAGSER+D   + GP     L E + IN SLS+LG  I AL+    H+P R+SKLT LL
Sbjct: 278 DLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLL 337
Query: 225 RDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           ++S GGSA+  + + + P   N +E+ +++ F  +
Sbjct: 338 QNSLGGSAKMLMFVNISPLEENVSESLNSLRFASK 372

>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 1   MAYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQL 53
            AYGQTG+GKT+T+G    GK+    +GI   A  D+   +   +       V  ++ ++
Sbjct: 177 FAYGQTGSGKTHTMGGDFSGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEI 236
Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           Y   + DLL   K  + + ED K  +V + G    +            +G   R +  T 
Sbjct: 237 YSGKVFDLLN-RKTKLRVLEDGKQ-QVQVVGLQEREVKCVEDVLKLIDIGNSCRTSGQTS 294
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N  SSRSHA+  + +RR                     G  H       K  ++DLAG+
Sbjct: 295 ANAHSSRSHAVFQIILRRK--------------------GKLH------GKFSLIDLAGN 328
Query: 174 ER-IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGS 231
           ER  D S ++     E   IN SL +L +CI AL  N PH P R SKLT++LRDSF G +
Sbjct: 329 ERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGEN 388
Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           +RT +I T+ P   +   T +T+ +  R
Sbjct: 389 SRTCMIATISPGMASCENTLNTLRYANR 416

>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 42/271 (15%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYM 55
            AYGQTG+GKT+T+           G++  +L+ I + +        S +V   ++++Y 
Sbjct: 467 FAYGQTGSGKTFTMSH------PTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYN 520
Query: 56  ESIQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANT 112
           E+I DLL P+        I  D   G+ ++   + +                  R  A T
Sbjct: 521 EAIVDLLNPKIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAAT 580
Query: 113 KLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSK---LLIVD 169
           K N  SSRSH+I ++                      +L G N   L ++S    L ++D
Sbjct: 581 KSNDHSSRSHSIFII----------------------DLQGYNS--LTKESSYGTLNLID 616
Query: 170 LAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALA-ENSPHIPTRDSKLTRLLRDSF 228
           LAGSER++ S +EG  L+E + IN SLS LG  I++L  ++  H+P R+SKLT LL+ S 
Sbjct: 617 LAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSL 676
Query: 229 GGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           GG+++T + + + P  ++  ET +++ F  +
Sbjct: 677 GGNSKTLMFVNISPLTKDLNETINSLRFATK 707

>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 1   MAYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDII-----SSMSVTSDSVEVSYLQL 53
            AYGQTG+GKT+T+G    GK   + +GI   A  D+            +  V V++ ++
Sbjct: 87  FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEI 146
Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           Y   + DLL  +K  + + ED +  +V + G                 +G   R +  T 
Sbjct: 147 YNGKVFDLL-NKKAKLRVLEDSRQ-QVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTF 204
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N+ SSRSHA   + +R                T+  L G          K  +VDLAG+
Sbjct: 205 ANSNSSRSHACFQILLR----------------TKGRLHG----------KFSLVDLAGN 238
Query: 174 ER-IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGS 231
           ER  D S ++     E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G +
Sbjct: 239 ERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 298
Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           +RT +I  + P   +   T +T+ +  R
Sbjct: 299 SRTCMIAMISPGISSCEYTLNTLRYADR 326

>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 1   MAYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDII-----SSMSVTSDSVEVSYLQL 53
            AYGQTG+GKT+T+G    GK   + +GI   A  D+            +  V V++ ++
Sbjct: 159 FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEI 218
Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           Y   + DLL  +K  + + ED +  +V + G                 +G   R +  T 
Sbjct: 219 YNGKVFDLL-NKKAKLRVLEDSRQ-QVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTF 276
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N+ SSRSHA   + +R                T+  L G          K  +VDLAG+
Sbjct: 277 ANSNSSRSHACFQILLR----------------TKGRLHG----------KFSLVDLAGN 310
Query: 174 ER-IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGS 231
           ER  D S ++     E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G +
Sbjct: 311 ERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 370
Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           +RT +I  + P   +   T +T+ +  R
Sbjct: 371 SRTCMIAMISPGISSCEYTLNTLRYADR 398

>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 42/265 (15%)
Query: 1   MAYGQTGTGKTYTLGRL--GKDDASERGIMVRALEDIISSMSV----TSDSVEV--SYLQ 52
           +AYGQTGTGK+Y++G    G+      GI+ RAL DI   ++       D+++V  S+++
Sbjct: 99  LAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIE 158
Query: 53  LYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANT 112
           +Y E   DLL     ++P+              T +             +G  NR    T
Sbjct: 159 IYNEKPFDLLG-STPHMPMVA------ARCQRCTCLPLHSQADLHHILELGTRNRRVRPT 211
Query: 113 KLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAG 172
            +N+ SSRSHAI+ ++++   H                            S++ IVDLAG
Sbjct: 212 NMNSNSSRSHAIVTIHVKSKTHH---------------------------SRMNIVDLAG 244
Query: 173 SERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232
           SE + ++G EG   +E   INL L S+ K + ++A     IP RDS LT +L+ S    +
Sbjct: 245 SEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQS 304
Query: 233 RTSLIITVGPSARNHAETTSTIMFG 257
             + +  + P   + +ET ST+ FG
Sbjct: 305 YLTFLACISPHQCDLSETLSTLRFG 329

>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 42/265 (15%)
Query: 1   MAYGQTGTGKTYTLGRL--GKDDASERGIMVRALEDIISSMSV----TSDSVEV--SYLQ 52
           +AYGQTGTGK+Y++G    G+      GI+ RAL DI   ++       D+++V  S+++
Sbjct: 99  LAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIE 158
Query: 53  LYMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANT 112
           +Y E   DLL     ++P+              T +             +G  NR    T
Sbjct: 159 IYNEKPFDLLG-STPHMPMVA------ARCQRCTCLPLHSQADLHHILELGTRNRRVRPT 211
Query: 113 KLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAG 172
            +N+ SSRSHAI+ ++++   H                            S++ IVDLAG
Sbjct: 212 NMNSNSSRSHAIVTIHVKSKTHH---------------------------SRMNIVDLAG 244
Query: 173 SERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232
           SE + ++G EG   +E   INL L S+ K + ++A     IP RDS LT +L+ S    +
Sbjct: 245 SEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQS 304
Query: 233 RTSLIITVGPSARNHAETTSTIMFG 257
             + +  + P   + +ET ST+ FG
Sbjct: 305 YLTFLACISPHQCDLSETLSTLRFG 329

>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 1   MAYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDII-----SSMSVTSDSVEVSYLQL 53
            AYGQTG+GKT+T+G    GK   + +GI   A  D+               V V++ ++
Sbjct: 139 FAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEI 198
Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
           Y   + DLL  +K  + + ED K  +V + G                 +G   R +  T 
Sbjct: 199 YNGKLFDLLN-KKAKLRVLEDGKQ-QVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTF 256
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N+ SSRSHA   + +R                      G  H       K  +VDLAG+
Sbjct: 257 ANSNSSRSHACFQIILRAK--------------------GRMH------GKFSLVDLAGN 290
Query: 174 ER-IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGS 231
           ER  D S ++     E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G +
Sbjct: 291 ERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 350
Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           +RT +I T+ P   +   T +T+ +  R
Sbjct: 351 SRTCMIATISPGISSCEYTLNTLRYADR 378

>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 129/281 (45%), Gaps = 52/281 (18%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG+GKTYT+   G       G++   L  I    +   +      +E  Y+++Y 
Sbjct: 90  FAYGQTGSGKTYTMLNAGD------GMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYN 143
Query: 56  ESIQDLLAPEKVNIPINE-----------DPKTGEVSLPGATVVKXXXXXXXXXXXXVGE 104
           E+I DLL   K +  I+E           D +     +   T +K               
Sbjct: 144 ETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKAS 203
Query: 105 VNRHAANTKLNTESSRSHAILVVYIR-RSVHEIIDKITSEEKDTRTELPGDNHVPLVRKS 163
             R  A T+ N  SSRSH++ +V+I  R++H      T E                  + 
Sbjct: 204 KMRSTAATRSNERSSRSHSVFMVHINGRNLH------TGE----------------TSQG 241
Query: 164 KLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-----HIPTRDS 218
           KL +VDLAGSERI+ S   G  L E + IN SLS LG  I AL  N+P     +IP R+S
Sbjct: 242 KLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYAL--NTPDAGKRYIPFRNS 299
Query: 219 KLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           KLT LL+ S  G ++T + + + P   + +ET +++ F  +
Sbjct: 300 KLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASK 340

>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 136/283 (48%), Gaps = 56/283 (19%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYM 55
            AYGQTG+GKTYT+   G       GI+   +  I S +        S  V   ++++Y 
Sbjct: 111 FAYGQTGSGKTYTMLNPGD------GIVPATINHIFSWIDKLAARGWSYKVSCEFIEIYN 164
Query: 56  ESIQDLL---APEKVNIPINEDPKTGEVSLP---GATVVKXXXXXXXXXXXXVGEVNRHA 109
           E+I DLL   AP + N   N D K  E+        T +             V +V + A
Sbjct: 165 ENIVDLLRSGAPSQENNDRNADSKH-EIRHDQELKTTYITNITTCVLDSRDTVDKVLKRA 223
Query: 110 ------ANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKS 163
                 A+T  N  SSRSH+I ++++                + + E  G+       KS
Sbjct: 224 NKLRSTASTAANEHSSRSHSIFIIHL----------------EGKNEGTGE-------KS 260
Query: 164 K--LLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP-----HIPTR 216
           +  L +VDLAGSER++ S   G  L E + IN SLS LG  I+AL  NSP     HIP R
Sbjct: 261 QGILNLVDLAGSERLNSSMVVGERLRETQSINKSLSCLGDVIHAL--NSPDGQKRHIPFR 318
Query: 217 DSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           +SKLT LL+ S  GS++T + + + P+A +  ET +++ F  +
Sbjct: 319 NSKLTYLLQYSLIGSSKTLMFVNISPAALHLNETINSLRFASK 361

>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 32/265 (12%)
Query: 1   MAYGQTGTGKTYT-LGRLGKDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYM 55
            AYGQTG+GKTYT LG      +   GI   A  DI + +++     +  + +S+ ++Y 
Sbjct: 89  FAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYC 148
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
             + DLL   K+   +    K  EV +    +++             G + R       N
Sbjct: 149 GKLYDLLQKRKMVAALENGKK--EVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQN 206
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
            ESSRSHAIL + ++      I+K TS                     K+  +DLAGSER
Sbjct: 207 DESSRSHAILNIDLKD-----INKNTSL-------------------GKIAFIDLAGSER 242
Query: 176 IDKSGSEGPLLE-EAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
              + S+    + +   IN SL +L +CI A+  +  HIP RDS+LT++LRD F G +++
Sbjct: 243 GADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKS 302
Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +I  + P+     +T +T+ +  R
Sbjct: 303 IMIANISPTISCCEQTLNTLRYSSR 327

>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 124/277 (44%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 145 FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYN 198
Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T VK                 
Sbjct: 199 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKL 258
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SSRSH+I +++                      L G N          L
Sbjct: 259 RSTASTASNEHSSRSHSIFIIH----------------------LSGSNAKTGAHSYGTL 296
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGSERI+ S   G  L E + IN SLS+LG  I+AL +      HIP R+SKLT 
Sbjct: 297 NLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTY 356
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 357 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 393

>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 122/277 (44%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 100 FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 153
Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  K                 
Sbjct: 154 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 213
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SSRSH+I +++                      L G N          L
Sbjct: 214 RSTASTASNEHSSRSHSIFIIH----------------------LSGSNAKTGAHSYGTL 251
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGSERI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT 
Sbjct: 252 NLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTY 311
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 312 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 348

>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 122/277 (44%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 88  FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 141
Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  K                 
Sbjct: 142 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 201
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SSRSH+I +++                      L G N          L
Sbjct: 202 RSTASTASNEHSSRSHSIFIIH----------------------LSGSNAKTGAHSYGTL 239
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGSERI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT 
Sbjct: 240 NLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTY 299
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 300 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 336

>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER-GIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
            AYGQTG+GKTYT+     D   E  G++ R ++ +  S+    +      ++ ++L++Y
Sbjct: 137 FAYGQTGSGKTYTM-----DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 191
Query: 55  MESIQDLLAPEKVNIPIN-EDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            E + DLL+ E+ ++ I        ++ +   T                 ++NR  A+T 
Sbjct: 192 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 251
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N  SSRSHA+  +       E+I +   +++              +    + +VDLAGS
Sbjct: 252 GNERSSRSHAVTKL-------ELIGRHAEKQE--------------ISVGSINLVDLAGS 290
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           E    S      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG+++
Sbjct: 291 E----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 346
Query: 234 TSLIITVGPSARNHAETTSTIMFG 257
           T + I V P      E+  ++ F 
Sbjct: 347 TLMFINVSPFQDCFQESVKSLRFA 370

>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 89  FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  K                 
Sbjct: 143 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 202
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SSRSH+I +++                      L G N          L
Sbjct: 203 RSTASTASNEHSSRSHSIFIIH----------------------LSGSNAKTGAHSYGTL 240
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGS RI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT 
Sbjct: 241 NLVDLAGSARINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTY 300
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 301 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 337

>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER-GIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
            AYGQTG+GKTYT+     D   E  G++ R ++ +  S+    +      ++ ++L++Y
Sbjct: 143 FAYGQTGSGKTYTM-----DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 197
Query: 55  MESIQDLLAPEKVNIPIN-EDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            E + DLL+ E+ ++ I        ++ +   T                 ++NR  A+T 
Sbjct: 198 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 257
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N  SSRSHA+  +       E+I +   +++              +    + +VDLAGS
Sbjct: 258 GNERSSRSHAVTKL-------ELIGRHAEKQE--------------ISVGSINLVDLAGS 296
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           E    S      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG+++
Sbjct: 297 E----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 352
Query: 234 TSLIITVGPSARNHAETTSTIMFG 257
           T + I V P      E+  ++ F 
Sbjct: 353 TLMFINVSPFQDCFQESVKSLRFA 376

>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 89  FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  K                 
Sbjct: 143 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 202
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SSRSH+I +++                      L G N          L
Sbjct: 203 RSTASTASNEHSSRSHSIFIIH----------------------LSGSNAKTGAHSYGTL 240
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGSERI+ S   G  L E + I  SLS LG  I+AL +      HIP R+SKLT 
Sbjct: 241 NLVDLAGSERINVSQVVGDRLRETQNIKKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTY 300
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 301 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 337

>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER-GIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
            AYGQTG+GKTYT+     D   E  G++ R ++ +  S+    +      ++ ++L++Y
Sbjct: 151 FAYGQTGSGKTYTM-----DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 205
Query: 55  MESIQDLLAPEKVNIPIN-EDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            E + DLL+ E+ ++ I        ++ +   T                 ++NR  A+T 
Sbjct: 206 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 265
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN-HVPLVRKSKLLIVDLAG 172
            N  SSRSHA+                      T+ EL G +     +    + +VDLAG
Sbjct: 266 GNERSSRSHAV----------------------TKLELIGRHAEKQEISVGSINLVDLAG 303
Query: 173 SERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232
           SE    S      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG++
Sbjct: 304 SE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNS 359
Query: 233 RTSLIITVGPSARNHAETTSTIMFG 257
           +T + I V P      E+  ++ F 
Sbjct: 360 KTLMFINVSPFQDCFQESVKSLRFA 384

>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 121/277 (43%), Gaps = 46/277 (16%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
            AYGQTG+GKT+T+   G       GI+   +  I + ++          V   ++++Y 
Sbjct: 89  FAYGQTGSGKTFTMLNPGD------GIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142
Query: 56  ESIQDLLAPEKVNI---------PINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  K                 
Sbjct: 143 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 202
Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SS SH+I +++                      L G N          L
Sbjct: 203 RSTASTASNEHSSASHSIFIIH----------------------LSGSNAKTGAHSYGTL 240
Query: 167 -IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTR 222
            +VDLAGSERI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT 
Sbjct: 241 NLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTY 300
Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LL+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 301 LLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 337

>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 189 AKFINLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNH 247
           AK IN SLS+LG  I+ALAE +  H+P RDSK+TR+L+DS  G+ RT+++I   PS  N 
Sbjct: 1   AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNE 60
Query: 248 AETTSTIMFGQRG 260
           AET ST+MFGQR 
Sbjct: 61  AETKSTLMFGQRA 73

>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER-GIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
            AYGQ+G+GKTYT+     D   E  G++ R ++ +  S+    +      ++ ++L++Y
Sbjct: 140 FAYGQSGSGKTYTM-----DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 194
Query: 55  MESIQDLLAPEKVNIPIN-EDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            E + DLL+ E+ ++ I        ++ +   T                 ++NR  A+T 
Sbjct: 195 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 254
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN-HVPLVRKSKLLIVDLAG 172
            N  SSRSHA+                      T+ EL G +     +    + +VDLAG
Sbjct: 255 GNERSSRSHAV----------------------TKLELIGRHAEKQEISVGSINLVDLAG 292
Query: 173 SERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA 232
           SE    S      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG++
Sbjct: 293 SE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNS 348
Query: 233 RTSLIITVGPSARNHAETTSTIMFG 257
           +T + I V P      E+  ++ F 
Sbjct: 349 KTLMFINVSPFQDCFQESVKSLRFA 373

>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 193 NLSLSSLGKCINALAENSP-HIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETT 251
           N SLS+LG  I+ALAE +  H+P RDSK+TR+L+DS GG+ RT+++I   PS  N AET 
Sbjct: 1   NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETK 60
Query: 252 STIMFGQRG 260
           ST+MFGQR 
Sbjct: 61  STLMFGQRA 69

>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 37/264 (14%)
Query: 1   MAYGQTGTGKTYTLGRLGKDDASER-GIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
            AYGQTG+GKTYT+     D   E  G++ R ++ +  S+    +      ++ ++L++Y
Sbjct: 140 FAYGQTGSGKTYTM-----DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 194
Query: 55  MESIQDLLAPEKVNIPIN-EDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTK 113
            E + DLL+ E+ ++ I        ++ +   T                 ++NR  A+T 
Sbjct: 195 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTA 254
Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N  SSRSHA+  +       E+I +   +++              +    + +VDLAGS
Sbjct: 255 GNERSSRSHAVTKL-------ELIGRHAEKQE--------------ISVGSINLVDLAGS 293
Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           E    S      + E K I  SLS L   I AL +   HIP R+SKLT LL  S GG+++
Sbjct: 294 E----SPKTSTRMTETKNIKRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK 349
Query: 234 TSLIITVGPSARNHAETTSTIMFG 257
           T + I V P      E+  ++ F 
Sbjct: 350 TLMFINVSPFQDCFQESVKSLRFA 373

>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 29/181 (16%)
Query: 1   MAYGQTGTGKTYTL-GRLGKDDASERGIMVRALEDIISSMSVTSDSVE----VSYLQLYM 55
            AYGQT +GKT+T+ G+L   D    GI+ R   DI   +    +++E    VSY ++Y+
Sbjct: 82  FAYGQTSSGKTHTMEGKL--HDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYL 139
Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKXXXXXXXXXXXXVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED K     + G T                G+ NRH A T +N
Sbjct: 140 DKIRDLLDVSKTNLAVHED-KNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMN 198
Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ I++           E  +T  +L G          KL +VDLAGSE+
Sbjct: 199 EHSSRSHSIFLINIKQ-----------ENVETEKKLSG----------KLYLVDLAGSEK 237
Query: 176 I 176
           +
Sbjct: 238 V 238

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	267
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	7e-97
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	3e-94
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	5e-94
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	1e-93
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	4e-93
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	8e-92
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	4e-91
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	5e-91
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	1e-90
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	6e-90
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	7e-90
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	3e-89
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	2e-88
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	3e-88
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	3e-88
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	1e-87
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	8e-87
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	1e-86
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	2e-86
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	1e-85
3u06_A	412	Protein claret segregational; motor domain, stalk	2e-84
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	7e-84
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	3e-83
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	7e-79
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	3e-78
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	1e-77
2kin_B	100	Kinesin; motor protein, cytoskeleton; HET: ADP; 2.	3e-30
3kin_B	117	Kinesin heavy chain; motor protein, cytoskeleton;	5e-28
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325

 Score =  286 bits (733), Expect = 7e-97
 Identities = 104/263 (39%), Positives = 161/263 (61%), Gaps = 29/263 (11%)

Query: 2   AYGQTGTGKTYTLGRLGK-DDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
           AYGQT +GKT+T+   GK  D    GI+ R ++DI + +    +     ++VSY ++Y++
Sbjct: 83  AYGQTSSGKTHTME--GKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLD 140

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLL   K N+ ++ED       + G T   +   D ++  +  G+ NRH A T +N 
Sbjct: 141 KIRDLLDVSKTNLSVHEDKNRV-PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNE 199

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSH+I ++ +             ++++T+TE             KL +VDLAGSE++
Sbjct: 200 HSSRSHSIFLINV-------------KQENTQTEQ--------KLSGKLYLVDLAGSEKV 238

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL 236
            K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT++
Sbjct: 239 SKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTI 298

Query: 237 IITVGPSARNHAETTSTIMFGQR 259
           +I   PS+ N +ET ST++FGQR
Sbjct: 299 VICCSPSSYNESETKSTLLFGQR 321

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365

 Score =  281 bits (720), Expect = 3e-94
 Identities = 102/264 (38%), Positives = 160/264 (60%), Gaps = 30/264 (11%)

Query: 2   AYGQTGTGKTYTLGRLGK-DDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
           AYGQT +GKT+T+   G   D+ ++GI+ R + DI + +          ++VSY ++YM+
Sbjct: 90  AYGQTSSGKTHTME--GVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMD 147

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLL   KVN+ ++ED       + GAT   +   + + ++++ G+ NRH A T +N 
Sbjct: 148 KIRDLLDVSKVNLSVHEDKNRV-PYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNE 206

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSH++ ++ +             E  + +               KL +VDLAGSE++
Sbjct: 207 HSSRSHSVFLINV-----------KQENLENQK----------KLSGKLYLVDLAGSEKV 245

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+EG +L+EAK IN SLS+LG  I+ALA+ N  HIP RDSKLTR+L++S GG+ART+
Sbjct: 246 SKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTT 305

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           ++I   P++ N +ET ST+ FG+R
Sbjct: 306 IVICCSPASFNESETKSTLDFGRR 329

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388

 Score =  281 bits (720), Expect = 5e-94
 Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 32/265 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-------SVEVSYLQLY 54
           AYG TG GKT+T+  LG  +  + G++ RAL D++               SV +SYL++Y
Sbjct: 104 AYGPTGAGKTHTM--LGSPE--QPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIY 159

Query: 55  MESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
            E + DLL P   ++ I ED +   + +PG +   +       +       NR    T+L
Sbjct: 160 QEKVLDLLDPASGDLVIREDCRGN-ILIPGLSQKPISSFADFERHFLPASRNRTVGATRL 218

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+L+V +                  + E          R+ KL ++DLAGSE
Sbjct: 219 NQRSSRSHAVLLVKV-----------------DQRERLAPFRQ---REGKLYLIDLAGSE 258

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
              ++G++G  L+E+  IN SL  LGK ++AL +  P +P RDSKLTRLL+DS GGSA +
Sbjct: 259 DNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHS 318

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            LI  + P  R + +T S + F  R
Sbjct: 319 ILIANIAPERRFYLDTVSALNFAAR 343

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355

 Score =  279 bits (715), Expect = 1e-93
 Identities = 110/263 (41%), Positives = 162/263 (61%), Gaps = 27/263 (10%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYGQTG GK+YT+     DD   RG++ R +E I +S+  ++     +V VSY+++YME 
Sbjct: 86  AYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMER 145

Query: 58  IQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTE 117
           I+DLLAP+  N+P++E+   G V + G   + +  +  + ++++ G   R  A T +N E
Sbjct: 146 IRDLLAPQNDNLPVHEEKNRG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQE 204

Query: 118 SSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SSRSH+I V+ I           T +  +T +           +  +L +VDLAGSE++ 
Sbjct: 205 SSRSHSIFVITI-----------TQKNVETGSA----------KSGQLFLVDLAGSEKVG 243

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTSL 236
           K+G+ G  LEEAK IN SLS+LG  INAL +  S H+P RDSKLTR+L++S GG++RT+L
Sbjct: 244 KTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTL 303

Query: 237 IITVGPSARNHAETTSTIMFGQR 259
           II   PS+ N AET ST+ FG R
Sbjct: 304 IINCSPSSYNDAETLSTLRFGMR 326

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344

 Score =  274 bits (702), Expect = 8e-92
 Identities = 101/268 (37%), Positives = 142/268 (52%), Gaps = 24/268 (8%)

Query: 2   AYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDIISSMSVTSD---SVEVSYLQLYME 56
           AYGQTG+GKTYT+G   +      E+GI+ RA+ +    +         V VSYL++Y E
Sbjct: 89  AYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKE 148

Query: 57  SIQDLLAPE--KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
             +DLL       +I + ED +   V L G   V +  LD +L LL++G   RH   T L
Sbjct: 149 EFRDLLEVGTASRDIQLREDERGN-VVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHL 207

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSH +  V +             E++              +  SK   VDLAGSE
Sbjct: 208 NHLSSRSHTVFTVTL-------------EQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSE 254

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRLLRDSFGGS 231
           R+ K+GS G  L+E+  IN SL +LG  I+AL +      HIP RDSK+TR+L+DS GG+
Sbjct: 255 RVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGN 314

Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           A+T +I  V PS+ +  ET +T+ +  R
Sbjct: 315 AKTVMIACVSPSSSDFDETLNTLNYASR 342

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330

 Score =  271 bits (696), Expect = 4e-91
 Identities = 98/265 (36%), Positives = 146/265 (55%), Gaps = 33/265 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYGQTG GKTYT+   G  +    GI  RAL+ + S +   +     ++ VS  ++Y E 
Sbjct: 86  AYGQTGAGKTYTM--EGTAE--NPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEV 141

Query: 58  IQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
           ++DLL  E   K+ I +  D  +G++ +PG T  +++ +D + ++ + G  NR    T L
Sbjct: 142 LRDLLGKEPQEKLEIRLCPD-GSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNL 200

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+L+V +       +D  T                      KL +VDLAGSE
Sbjct: 201 NEHSSRSHALLIVTV-----RGVDCSTGL----------------RTTGKLNLVDLAGSE 239

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
           R+ KSG+EG  L EA+ IN SLS+LG  I AL     H+P R+SKLT LL+DS  G ++T
Sbjct: 240 RVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKT 299

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +++ V P  +N +ET  ++ F +R
Sbjct: 300 LMVVQVSPVEKNTSETLYSLKFAER 324

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350

 Score =  272 bits (697), Expect = 5e-91
 Identities = 100/262 (38%), Positives = 149/262 (56%), Gaps = 29/262 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYGQTG GKT+T+   G  +  E G +  + + +  +++ +S      V  SYL+LY E 
Sbjct: 95  AYGQTGAGKTWTM--GGNKE--EPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEE 150

Query: 58  IQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTE 117
           I+DL+      +P+ ED   G + + G ++ ++     L  L+  G  NRH A T++N  
Sbjct: 151 IRDLIKN-NTKLPLKEDKTRG-IYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDT 208

Query: 118 SSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SSRSH+I +V I     E  + I ++E              ++R  KL +VDLAGSER  
Sbjct: 209 SSRSHSIFMVRI-----ECSEVIENKE--------------VIRVGKLNLVDLAGSERQS 249

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSLI 237
           K+G+ G  L E   INLSLS+LG  I+ L E + HIP RDSKLTRLL+DS GG+++T + 
Sbjct: 250 KTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMC 309

Query: 238 ITVGPSARNHAETTSTIMFGQR 259
             + P++ N+ ET ST+ +  R
Sbjct: 310 ANISPASTNYDETMSTLRYADR 331

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369

 Score =  271 bits (696), Expect = 1e-90
 Identities = 96/265 (36%), Positives = 148/265 (55%), Gaps = 33/265 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYGQTG+GKT+T+   G D     G+  RA+ ++   M   S+    S++   ++LY ++
Sbjct: 85  AYGQTGSGKTFTI--YGADS--NPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDT 140

Query: 58  IQDLLAPE---KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
           + DLL P+   ++ + I +D K   VS+   TVV +   + L  ++Q G   RH   T +
Sbjct: 141 LVDLLLPKQAKRLKLDIKKDSKGM-VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLM 199

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N +SSRSH I+ V I             E  + +T+         + + KL  VDLAGSE
Sbjct: 200 NEQSSRSHLIVSVII-------------ESTNLQTQA--------IARGKLSFVDLAGSE 238

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
           R+ KSGS G  L+EA+ IN SLS+LG  I+AL+  + HIP R+ KLT L+ DS GG+A+T
Sbjct: 239 RVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKT 298

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            + + + P+  N  ET +++ +  R
Sbjct: 299 LMFVNISPAESNLDETHNSLTYASR 323

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372

 Score =  270 bits (692), Expect = 6e-90
 Identities = 105/264 (39%), Positives = 151/264 (57%), Gaps = 27/264 (10%)

Query: 2   AYGQTGTGKTYTLGRLG-KDDASERGIMVRALEDIISSMSVTSD---SVEVSYLQLYMES 57
           AYGQTGTGKTYT+   G + D  +RG++  + + I + +S + +    V  SYL++Y E 
Sbjct: 107 AYGQTGTGKTYTME--GIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEE 164

Query: 58  IQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
           I+DLL+ +    + + E P TG V +   +    + +  +  ++ VG  NR    T +N 
Sbjct: 165 IRDLLSKDQTKRLELKERPDTG-VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNE 223

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSHAI V+ I              E     E         +R  KL +VDLAGSER 
Sbjct: 224 HSSRSHAIFVITI-----------ECSEVGLDGEN-------HIRVGKLNLVDLAGSERQ 265

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G++G  L+EA  INLSLS+LG  I+AL +  S HIP RDSKLTRLL+DS GG+A+T 
Sbjct: 266 AKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTV 325

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           ++  VGP++ N  ET +T+ +  R
Sbjct: 326 MVANVGPASYNVEETLTTLRYANR 349

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359

 Score =  269 bits (690), Expect = 7e-90
 Identities = 100/271 (36%), Positives = 144/271 (53%), Gaps = 31/271 (11%)

Query: 2   AYGQTGTGKTYTLG-------RLGKDDASERGIMVRALEDIISSMSVTSD--SVEVSYLQ 52
           AYGQTGTGKT+T+            ++    GI+ R L  I   ++      SV+VS L+
Sbjct: 94  AYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLE 153

Query: 53  LYMESIQDLLAPE---KVNIPINEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRH 108
           +Y E + DLL P       + + +DP     V + G   + + + D + Q+L+ G   R 
Sbjct: 154 IYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRT 213

Query: 109 AANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIV 168
            A T +N  SSRSH++  V I               K+T  +  G+  V   +  KL +V
Sbjct: 214 TAATLMNAYSSRSHSVFSVTI-------------HMKETTID--GEELV---KIGKLNLV 255

Query: 169 DLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF 228
           DLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+DS 
Sbjct: 256 DLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSL 315

Query: 229 GGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           GG  RTS+I T+ P++ N  ET ST+ +  R
Sbjct: 316 GGRTRTSIIATISPASLNLEETLSTLEYAHR 346

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373

 Score =  268 bits (687), Expect = 3e-89
 Identities = 95/270 (35%), Positives = 149/270 (55%), Gaps = 30/270 (11%)

Query: 2   AYGQTGTGKTYTLG-------RLGKDDASERGIMVRALEDIISSMSVTSD--SVEVSYLQ 52
           AYGQTGTGKT+T+        +   +D S+ GI+ RAL  +   + +     ++ +SYL+
Sbjct: 106 AYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLE 165

Query: 53  LYMESIQDLLAPE-KVNIPINEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAA 110
           LY E + DLL+ +    I I +D  K G V + G   + +   D + +LL+ G+  R  A
Sbjct: 166 LYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTA 225

Query: 111 NTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDL 170
            T +N +SSRSH +  + +                     + G++ +   +  KL +VDL
Sbjct: 226 TTLMNAQSSRSHTVFSIVVHIR---------------ENGIEGEDML---KIGKLNLVDL 267

Query: 171 AGSERIDKSGSE-GPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFG 229
           AGSE + K+G+E G  + E   IN SL +LG+ I AL + +PH+P R+SKLTRLL++S G
Sbjct: 268 AGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLG 327

Query: 230 GSARTSLIITVGPSARNHAETTSTIMFGQR 259
           G  +TS+I T+ P  ++  ET ST+ +  R
Sbjct: 328 GRTKTSIIATISPGHKDIEETLSTLEYAHR 357

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376

 Score =  266 bits (683), Expect = 2e-88
 Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 36/273 (13%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG+GKT+T+      D    G++ RAL  + S     S      S   SY+++Y E
Sbjct: 121 AYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNE 180

Query: 57  SIQDLLAPEKVNIP-----INEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAA 110
           +++DLLA            I      + E+++  A  V +     +  LL +   NR  A
Sbjct: 181 TVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVA 240

Query: 111 NTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDL 170
            T  N  SSRSH++  + I              +                  + L +VDL
Sbjct: 241 RTAQNERSSRSHSVFQLQI-----SGEHSSRGLQC----------------GAPLSLVDL 279

Query: 171 AGSERIDKSGSEGPL----LEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRD 226
           AGSER+D   + GP     L E + IN SLS+LG  I AL+    H+P R+SKLT LL++
Sbjct: 280 AGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQN 339

Query: 227 SFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           S GGSA+  + + + P   N +E+ +++ F  +
Sbjct: 340 SLGGSAKMLMFVNISPLEENVSESLNSLRFASK 372

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366

 Score =  265 bits (681), Expect = 3e-88
 Identities = 99/276 (35%), Positives = 155/276 (56%), Gaps = 38/276 (13%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T++     SVEVSY+++Y E
Sbjct: 95  AYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCE 152

Query: 57  SIQDLLAPE-KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLN 115
            ++DLL P+ K N+ + E P  G   +   + + +   + +  L+  G   R  A T +N
Sbjct: 153 RVRDLLNPKNKGNLRVREHPLLG-PYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMN 211

Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSHA+  +   +  H+    IT+E                 + SK+ +VDLAGSER
Sbjct: 212 ETSSRSHAVFNIIFTQKRHDAETNITTE-----------------KVSKISLVDLAGSER 254

Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP------------HIPTRDSKLTRL 223
            D +G++G  L+E   IN SL++LGK I+ALAE                IP RDS LT L
Sbjct: 255 ADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWL 314

Query: 224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LR++ GG++RT+++  + P+  N+ ET ST+ +  R
Sbjct: 315 LRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360

 Score =  265 bits (680), Expect = 3e-88
 Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 32/264 (12%)

Query: 2   AYGQTGTGKTYT-LGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
           AYGQTG+GKTYT LG      +   GI   A  DI + +++        + +S+ ++Y  
Sbjct: 90  AYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCG 149

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            + DLL   K  +   E+ K   V +    ++++   + L+  +  G + R       N 
Sbjct: 150 KLYDLLQKRK-MVAALENGKKE-VVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQND 207

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSHAIL + ++                                 K+  +DLAGSER 
Sbjct: 208 ESSRSHAILNIDLKDINKNT------------------------SLGKIAFIDLAGSERG 243

Query: 177 DKSGSEGP-LLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
             + S+      +   IN SL +L +CI A+  +  HIP RDS+LT++LRD F G +++ 
Sbjct: 244 ADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSI 303

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           +I  + P+     +T +T+ +  R
Sbjct: 304 MIANISPTISCCEQTLNTLRYSSR 327

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347

 Score =  263 bits (675), Expect = 1e-87
 Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 46/276 (16%)

Query: 2   AYGQTGTGKTYT-LGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
           AYGQTG+GKT+T L           GI+   +  I + ++          V   ++++Y 
Sbjct: 90  AYGQTGSGKTFTMLN-------PGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 142

Query: 56  ESIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVN 106
           E+I DLL  +  N           I  D +T   ++   T  KL   + +  +L+     
Sbjct: 143 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 202

Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SS SH+I ++++                + +T               L 
Sbjct: 203 RSTASTASNEHSSASHSIFIIHL-------------SGSNAKTGA--------HSYGTLN 241

Query: 167 IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTRL 223
           +VDLAGSERI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT L
Sbjct: 242 LVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYL 301

Query: 224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           L+ S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 302 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 337

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349

 Score =  261 bits (669), Expect = 8e-87
 Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 30/265 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD---SVEVSYLQLYMESI 58
           AYGQT +GKTYT+   G +D    G++ RA+ DI   +    D    + VSY+++Y E+I
Sbjct: 83  AYGQTASGKTYTMM--GSED--HLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETI 138

Query: 59  QDLLAP--EKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            DLL    +   + I ED     V +   T   +   +  L+ +  GE +RH   TK+N 
Sbjct: 139 TDLLCGTQKMKPLIIREDVNRN-VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQ 197

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
            SSRSH I               +  E ++       +  V   + S L +VDLAGSER 
Sbjct: 198 RSSRSHTIFR-------------MILESREKGEPSNCEGSV---KVSHLNLVDLAGSERA 241

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAE--NSPHIPTRDSKLTRLLRDSFGGSART 234
            ++G+ G  L+E   IN SL  LG+ I  L++      I  RDSKLTR+L++S GG+A+T
Sbjct: 242 AQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKT 301

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +I T+ P   +  ET + + F   
Sbjct: 302 RIICTITPV--SFDETLTALQFAST 324

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403

 Score =  262 bits (672), Expect = 1e-86
 Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 44/275 (16%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYME 56
           AYGQTG+GKT+T+  L        GI+   +  I + ++          V   ++++Y E
Sbjct: 146 AYGQTGSGKTFTM--LN----PGDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNE 199

Query: 57  SIQDLLAPEKVNIP---------INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNR 107
           +I DLL  +  N           I  D +T   ++   T VKL   + +  +L+     R
Sbjct: 200 NIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLR 259

Query: 108 HAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLI 167
             A+T  N  SSRSH+I ++++  S     +  T                       L +
Sbjct: 260 STASTASNEHSSRSHSIFIIHLSGS-----NAKTGA----------------HSYGTLNL 298

Query: 168 VDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLTRLL 224
           VDLAGSERI+ S   G  L E + IN SLS+LG  I+AL +      HIP R+SKLT LL
Sbjct: 299 VDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLL 358

Query: 225 RDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           + S  G ++T + + + PS+ +  ET +++ F  +
Sbjct: 359 QYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 393

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354

 Score =  260 bits (667), Expect = 2e-86
 Identities = 91/271 (33%), Positives = 147/271 (54%), Gaps = 35/271 (12%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG+GK+YT+  +G  D  + G++ R    +        +      VEVSY+++Y E
Sbjct: 98  AYGQTGSGKSYTM--MGTAD--QPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNE 153

Query: 57  SIQDLLAPE--KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
            ++DLL P+  +  + + E    G   + G + + +     +  L+  G  +R  A T +
Sbjct: 154 KVRDLLDPKGSRQTLKVREHSVLG-PYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNM 212

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N ESSRSHA+  + +  +++++    + E                 +  KL +VDLAGSE
Sbjct: 213 NEESSRSHAVFKITLTHTLYDVKSGTSGE-----------------KVGKLSLVDLAGSE 255

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP------HIPTRDSKLTRLLRDSF 228
           R  K+G+ G  L+E   IN SL++LG  I+ALA+ S        +P RDS LT LL+DS 
Sbjct: 256 RATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSL 315

Query: 229 GGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           GG+++T+++ TV P+A N+ ET ST+ +  R
Sbjct: 316 GGNSKTAMVATVSPAADNYDETLSTLRYADR 346

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344

 Score =  258 bits (661), Expect = 1e-85
 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 42/266 (15%)

Query: 2   AYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDIISSMSVTSD------SVEVSYLQL 53
           AYGQTGTGK+Y++G    G+      GI+ RAL DI   ++   +       V  S++++
Sbjct: 100 AYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEI 159

Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           Y E   DLL            P          T + L     L  +L++G  NR    T 
Sbjct: 160 YNEKPFDLLGSTP------HMPMVA-ARCQRCTCLPLHSQADLHHILELGTRNRRVRPTN 212

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N+ SSRSHAI+ ++++                                S++ IVDLAGS
Sbjct: 213 MNSNSSRSHAIVTIHVKSKT---------------------------HHSRMNIVDLAGS 245

Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           E + ++G EG   +E   INL L S+ K + ++A     IP RDS LT +L+ S    + 
Sbjct: 246 EGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSY 305

Query: 234 TSLIITVGPSARNHAETTSTIMFGQR 259
            + +  + P   + +ET ST+ FG  
Sbjct: 306 LTFLACISPHQCDLSETLSTLRFGTS 331

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412

 Score =  257 bits (659), Expect = 2e-84
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 37/265 (13%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYME 56
           AYGQTG+GKTYT+   G  +    G++ R ++ +  S+    +      ++ ++L++Y E
Sbjct: 144 AYGQTGSGKTYTM--DGVPE--SVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNE 199

Query: 57  SIQDLLAPEKVN--IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
            + DLL+ E+ +  I + ++ K   + +   T   + D +HL  L+   ++NR  A+T  
Sbjct: 200 VLYDLLSNEQKDMEIRMAKNNKND-IYVSNITEETVLDPNHLRHLMHTAKMNRATASTAG 258

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  + +               +    +         +    + +VDLAGSE
Sbjct: 259 NERSSRSHAVTKLEL-------------IGRHAEKQE--------ISVGSINLVDLAGSE 297

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
                      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG+++T
Sbjct: 298 S----PKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKT 353

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            + I V P      E+  ++ F   
Sbjct: 354 LMFINVSPFQDCFQESVKSLRFAAS 378

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349

 Score =  254 bits (650), Expect = 7e-84
 Identities = 82/278 (29%), Positives = 123/278 (44%), Gaps = 48/278 (17%)

Query: 2   AYGQTGTGKTYT-LGRLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLYM 55
           AYGQTG+GKTYT L        +  G++   L  I    +   +      +E  Y+++Y 
Sbjct: 91  AYGQTGSGKTYTMLN-------AGDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYN 143

Query: 56  ESIQDLLAPEKVNIP-----------INEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGE 104
           E+I DLL   K +             I  D +     +   T +K+     +  +L+   
Sbjct: 144 ETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKAS 203

Query: 105 VNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSK 164
             R  A T+ N  SSRSH++ +V            I      T              + K
Sbjct: 204 KMRSTAATRSNERSSRSHSVFMV-----------HINGRNLHTGE----------TSQGK 242

Query: 165 LLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE---NSPHIPTRDSKLT 221
           L +VDLAGSERI+ S   G  L E + IN SLS LG  I AL        +IP R+SKLT
Sbjct: 243 LNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLT 302

Query: 222 RLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
            LL+ S  G ++T + + + P   + +ET +++ F  +
Sbjct: 303 YLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASK 340

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355

 Score =  252 bits (646), Expect = 3e-83
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 31/265 (11%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYMES 57
           AYG TG GKT+T+  LG  D  E G+M   +  +   M    +    S  VSYL++Y E 
Sbjct: 111 AYGATGAGKTHTM--LGSAD--EPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQ 166

Query: 58  IQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTE 117
           I+DLL      + + ED + G V + G T+ + +  + +L LL  G  NR    T +N  
Sbjct: 167 IRDLLVNSG-PLAVREDTQKG-VVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNAT 224

Query: 118 SSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERID 177
           SSRSHA+  +Y+        DK  S  ++ R              +K+ ++DLAGSER  
Sbjct: 225 SSRSHAVFQIYL-----RQQDKTASINQNVRI-------------AKMSLIDLAGSERAS 266

Query: 178 KSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRLLRDSFGGSART 234
            SG++G    E   IN SL +LG  INALA++   + HIP R+SKLTRLL+DS GG+ +T
Sbjct: 267 TSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQT 326

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +I  V PS+  + +T +T+ +  R
Sbjct: 327 IMIAAVSPSSVFYDDTYNTLKYANR 351

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387

 Score =  242 bits (619), Expect = 7e-79
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 37/261 (14%)

Query: 2   AYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
           AYGQTG+GKT+T+G    GK   + +GI   A  D+    +          V V++ ++Y
Sbjct: 140 AYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIY 199

Query: 55  MESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
              + DLL   K  + + ED K   V + G     +   D +++++ +G   R +  T  
Sbjct: 200 NGKLFDLLNK-KAKLRVLEDGKQQ-VQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFA 257

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N+ SSRSHA   + +R        ++                       K  +VDLAG+E
Sbjct: 258 NSNSSRSHACFQIILRAK-----GRMHG---------------------KFSLVDLAGNE 291

Query: 175 RIDKSGSEGP-LLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGSA 232
           R   + S       E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G ++
Sbjct: 292 RGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENS 351

Query: 233 RTSLIITVGPSARNHAETTST 253
           RT +I T+ P   +   T +T
Sbjct: 352 RTCMIATISPGISSCEYTLNT 372

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410

 Score =  241 bits (617), Expect = 3e-78
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 37/261 (14%)

Query: 2   AYGQTGTGKTYTLG--RLGKDDASERGIMVRALEDIISSMSVTSD-----SVEVSYLQLY 54
           AYGQTG+GKT+T+G    GK   + +GI   A  D+    +          V V++ ++Y
Sbjct: 160 AYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIY 219

Query: 55  MESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
              + DLL   K  + + ED +   V + G     +   D +++++ +G   R +  T  
Sbjct: 220 NGKVFDLLNK-KAKLRVLEDSRQQ-VQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFA 277

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N+ SSRSHA   + +R        ++                       K  +VDLAG+E
Sbjct: 278 NSNSSRSHACFQILLRTK-----GRLHG---------------------KFSLVDLAGNE 311

Query: 175 RIDKSGSEGP-LLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGSA 232
           R   + S       E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G ++
Sbjct: 312 RGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENS 371

Query: 233 RTSLIITVGPSARNHAETTST 253
           RT +I  + P   +   T +T
Sbjct: 372 RTCMIAMISPGISSCEYTLNT 392

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443

 Score =  241 bits (616), Expect = 1e-77
 Identities = 89/292 (30%), Positives = 147/292 (50%), Gaps = 58/292 (19%)

Query: 2   AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-------VEVSYLQLY 54
           AYGQTG+GK+YT+  +G  D  + G++ R  ED+   ++   D        V+VSY ++Y
Sbjct: 142 AYGQTGSGKSYTM--MGTPD--QPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVY 197

Query: 55  MESIQDLLAPE-----KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHA 109
            E ++DLLAP         + + E P  G   +   T V +R L+ +++ +++G+ +R  
Sbjct: 198 NEHVRDLLAPVVPNKPPYYLKVRESPTEG-PYVKDLTEVPVRGLEEIIRWMRIGDGSRTV 256

Query: 110 ANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVD 169
           A+TK+N  SSRSHA+  + +                  +     +      R S++ +VD
Sbjct: 257 ASTKMNDTSSRSHAVFTIML-----------------KQIHHDLETDDTTERSSRIRLVD 299

Query: 170 LAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS------------------- 210
           LAGSER   + + G  L E   IN SL++LG+ I ALA+                     
Sbjct: 300 LAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPG 359

Query: 211 ---PHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
                +P RDS LT LL+DS GG+++T++I  + P+  ++ ET ST+ +  +
Sbjct: 360 PANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQ 409

>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100

 Score =  108 bits (271), Expect = 3e-30
 Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 1/72 (1%)

Query: 189 AKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNH 247
           AK IN SLS+LG  I+ALAE    H+P RDSK+TR+L+DS  G+ RT+++I   PS  N 
Sbjct: 1   AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNE 60

Query: 248 AETTSTIMFGQR 259
           AET ST+MFGQR
Sbjct: 61  AETKSTLMFGQR 72

>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117

 Score =  102 bits (257), Expect = 5e-28
 Identities = 40/68 (58%), Positives = 51/68 (75%), Gaps = 1/68 (1%)

Query: 193 NLSLSSLGKCINALAE-NSPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETT 251
           N SLS+LG  I+ALAE    H+P RDSK+TR+L+DS GG+ RT+++I   PS  N AET 
Sbjct: 1   NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETK 60

Query: 252 STIMFGQR 259
           ST+MFGQR
Sbjct: 61  STLMFGQR 68

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 2e-06
 Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 84/259 (32%)

Query: 3   YGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSYLQLYMESIQDLL 62
            G  G+GKT  +       A +   +  +   +   M       ++ +L L         
Sbjct: 156 DGVLGSGKT-WV-------ALD---VCLS-YKVQCKM-----DFKIFWLNL--------- 189

Query: 63  APEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRS- 121
                             + P   +  L+ L + +        + H++N KL   S ++ 
Sbjct: 190 ---------------KNCNSPETVLEMLQKLLYQIDPNWTSRSD-HSSNIKLRIHSIQAE 233

Query: 122 -----------HAILVVYIRRSV--HEIIDK--------ITSEEKDTRTELPGDN--HVP 158
                      + +LV+    +V   +  +         +T+  K     L      H+ 
Sbjct: 234 LRRLLKSKPYENCLLVL---LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 159 LVRKSKLLIVD-----LAGSERIDKSGSEGPLLEEAKFIN-LSLSSLGKCI---NALAEN 209
           L   S  L  D     L   + +D    + P   E    N   LS + + I    A  +N
Sbjct: 291 LDHHSMTLTPDEVKSLLL--KYLDCRPQDLP--REVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 210 SPHIPTRDSKLTRLLRDSF 228
             H+     KLT ++  S 
Sbjct: 347 WKHV--NCDKLTTIIESSL 363

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 3e-06
 Identities = 39/286 (13%), Positives = 77/286 (26%), Gaps = 116/286 (40%)

Query: 14  LGRLGKDDASE----RGIMVRALEDIISSMSVTS-DSVEVSYLQLYMESIQDLLA--PEK 66
           +    +D  +     + +    L  II   S+   +  E  Y +++       L+  P  
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVLEPAE--YRKMFDR-----LSVFPPS 384

Query: 67  VNIP----------------------------INEDPKTGEVSLPGATVVKLRDLDHLLQ 98
            +IP                            + + PK   +S+              + 
Sbjct: 385 AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI------------PSIY 432

Query: 99  LLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVH-EIIDK---ITSEEKDTRTELPGD 154
           L    E+     N                    ++H  I+D      + + D       D
Sbjct: 433 L----ELKVKLEN------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLD 470

Query: 155 N--------HVPLVRKSKLLIVDLAGSERIDKSGSEGPLLE------EAKFIN--LSLSS 198
                    H             L   E  ++  +   ++       E K  +   + ++
Sbjct: 471 QYFYSHIGHH-------------LKNIEHPERM-TLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 199 LGKCINALAE---NSPHIPTRDSKLTRLLRD--SFGGSARTSLIIT 239
            G  +N L +     P+I   D K  RL+     F      +LI +
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	267
1goj_A	355	Kinesin, kinesin heavy chain; motor protein, ATPas	100.0
1bg2_A	325	Kinesin; motor protein, ATPase, microtubule associ	100.0
2zfi_A	366	Kinesin-like protein KIF1A, kinesin heavy chain is	100.0
2y65_A	365	Kinesin, kinesin heavy chain; motor protein; HET:	100.0
2h58_A	330	Kinesin-like protein KIFC3 variant; motor domain,	100.0
3bfn_A	388	Kinesin-like protein KIF22; limited proteolysis, s	100.0
3cob_A	369	Kinesin heavy chain-like protein; motor, switch II	100.0
2wbe_C	373	Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit	100.0
2vvg_A	350	Kinesin-2; motor protein, nucleotide-binding, micr	100.0
2rep_A	376	Kinesin-like protein KIFC1; structural genomics co	100.0
1x88_A	359	Kinesin-like protein KIF11; switch II, motor domai	100.0
3b6u_A	372	Kinesin-like protein KIF3B; structural genomics co	100.0
1f9v_A	347	Kinesin-like protein KAR3; kinesin-related protein	100.0
3gbj_A	354	KIF13B protein; kinesin, motor domain, ADP, struct	100.0
3lre_A	355	Kinesin-like protein KIF18A; motor protein, nucleo	100.0
1t5c_A	349	CENP-E protein, centromeric protein E; kinesin mot	100.0
1ry6_A	360	Internal kinesin; kinesin motor domain, nucleotide	100.0
3t0q_A	349	AGR253WP; kinesin, alpha and beta proteins, P-loop	100.0
2owm_A	443	Nckin3-434, related to kinesin-like protein KIF1C;	100.0
4a14_A	344	Kinesin, kinesin-like protein KIF7; motor protein,	100.0
2nr8_A	358	Kinesin-like protein KIF9; motor domain, ADP, stru	100.0
3nwn_A	359	Kinesin-like protein KIF9; motor domain, ADP, stru	100.0
2heh_A	387	KIF2C protein; kinesin, motor domain, ADP, structu	100.0
1v8k_A	410	Kinesin-like protein KIF2C; microtubule destabiliz	100.0
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	100.0
3dc4_A	344	Kinesin-like protein NOD; catalytic domain, ATPase	100.0
3u06_A	412	Protein claret segregational; motor domain, stalk	100.0
4h1g_A	715	Maltose binding protein-cakar3 motor domain fusio;	100.0
2kin_B	100	Kinesin; motor protein, cytoskeleton; HET: ADP; 2.	99.94
3kin_B	117	Kinesin heavy chain; motor protein, cytoskeleton;	99.92
2o0a_A	298	S.cerevisiae chromosome XVI reading frame ORF YPL2	99.32
2kjq_A	149	DNAA-related protein; solution structure, NESG, st	84.52
3ec2_A	180	DNA replication protein DNAC; helicase loader, rep	84.43

>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9

Probab=100.00  E-value=3.4e-71  Score=489.11  Aligned_cols=244  Identities=45%  Similarity=0.703  Sum_probs=226.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|.+.++.+++|||||++++||..+...    .+.|.+||+|||||+++|||+|....+.+++++.
T Consensus        85 fAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~  164 (355)
T 1goj_A           85 FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKN  164 (355)
T ss_dssp             EEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETT
T ss_pred             EEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCceeEEcCC
Confidence            799999999999999876666788999999999999987543    4589999999999999999999888999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|+++++|.|++|++++|..|..+|..+++.+|..|||||+||+|+|.+....                     
T Consensus       165 ~g-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---------------------  222 (355)
T 1goj_A          165 RG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE---------------------  222 (355)
T ss_dssp             TE-EEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT---------------------
T ss_pred             CC-EeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccC---------------------
Confidence            55 89999999999999999999999999999999999999999999999999875321                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      .+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+||||++|+
T Consensus       223 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~  302 (355)
T 1goj_A          223 TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT  302 (355)
T ss_dssp             TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEE
T ss_pred             CCceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEE
Confidence            12356799999999999999999999999999999999999999999999986 47999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||+||+|+..+++||++||+||+|+++|+|.
T Consensus       303 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~  333 (355)
T 1goj_A          303 LIINCSPSSYNDAETLSTLRFGMRAKSIKNK  333 (355)
T ss_dssp             EEEEECCBGGGHHHHHHHHHHHHHHHTCBCC
T ss_pred             EEEEECcccccHHHHHHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999985

>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*

Probab=100.00  E-value=1.9e-71  Score=485.73  Aligned_cols=240  Identities=41%  Similarity=0.640  Sum_probs=221.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|. .+++.++|||||++++||+.+..    ..+.|.+||+|||||+++|||++.+.++.+++++.
T Consensus        82 fAYGqTGSGKTyTm~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~e~~~  160 (325)
T 1bg2_A           82 FAYGQTSSGKTHTMEGK-LHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKN  160 (325)
T ss_dssp             EEECSTTSSHHHHHTBS-TTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTT
T ss_pred             EEECCCCCCCceEeccc-CCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCCCCCceEEECCC
Confidence            79999999999999884 34456789999999999998753    34689999999999999999999889999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|++++.|.|++|++++|+.|.++|..+++.+|..|||||+||+|+|.+....                     
T Consensus       161 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---------------------  218 (325)
T 1bg2_A          161 RV-PYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQ---------------------  218 (325)
T ss_dssp             SC-EEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETT---------------------
T ss_pred             CC-EEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecC---------------------
Confidence            55 88999999999999999999999999999999999999999999999999875321                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL  236 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~  236 (267)
                      ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|+|
T Consensus       219 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~m  298 (325)
T 1bg2_A          219 TEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTI  298 (325)
T ss_dssp             TCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEE
T ss_pred             CCcEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEE
Confidence            12346799999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          237 IITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       237 I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+||+|+..+++||++||+||+||++|
T Consensus       299 ia~vsP~~~~~~ETl~TL~fa~rak~I  325 (325)
T 1bg2_A          299 VICCSPSSYNESETKSTLLFGQRAKTI  325 (325)
T ss_dssp             EEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred             EEEECCccccHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999986

>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*

Probab=100.00  E-value=9.1e-71  Score=488.63  Aligned_cols=246  Identities=38%  Similarity=0.598  Sum_probs=210.0

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCCC-CCcCcccC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPEK-VNIPINED   74 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~   74 (267)
                      ||||||||||||||+|..  ..+++|||||++++||..+...     .+.|.+||+|||||+|+|||+|.. ..+.++++
T Consensus        94 fAYGqTGSGKTyTm~G~~--~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~  171 (366)
T 2zfi_A           94 FAYGQTGAGKSYTMMGKQ--EKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREH  171 (366)
T ss_dssp             EEECSTTSSHHHHHTBCS--GGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEE
T ss_pred             EEeCCCCCCCceEeeCCC--ccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEc
Confidence            799999999999997742  3467899999999999988653     358999999999999999999864 57899999


Q ss_pred             CCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCC
Q 024439           75 PKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGD  154 (267)
Q Consensus        75 ~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~  154 (267)
                      +..| +++.|++++.|.|++|++++|..|.++|..++|.+|..|||||+||+|+|.+......                 
T Consensus       172 ~~~g-~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~-----------------  233 (366)
T 2zfi_A          172 PLLG-PYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE-----------------  233 (366)
T ss_dssp             TTTE-EEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT-----------------
T ss_pred             CCCC-EEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCC-----------------
Confidence            8766 8899999999999999999999999999999999999999999999999987644211                 


Q ss_pred             CCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------------CCCCCCCCchhhH
Q 024439          155 NHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------------SPHIPTRDSKLTR  222 (267)
Q Consensus       155 ~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~------------~~~ipyr~SkLT~  222 (267)
                      ........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++            ..|||||+||||+
T Consensus       234 ~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~  313 (366)
T 2zfi_A          234 TNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW  313 (366)
T ss_dssp             TTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHH
T ss_pred             CCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHH
Confidence            1112346799999999999999999999999999999999999999999999863            4699999999999


Q ss_pred             hhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       223 lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||||+||||++|+||+||+|+..+++||++||+||+||++|+|.
T Consensus       314 lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~  357 (366)
T 2zfi_A          314 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNT  357 (366)
T ss_dssp             HTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC-----
T ss_pred             HHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999999999999999999999999999999985

>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*

Probab=100.00  E-value=7.9e-71  Score=488.00  Aligned_cols=243  Identities=42%  Similarity=0.654  Sum_probs=208.7

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|. .+++.++|||||++++||..+...    .+.|.+||+|||||+++|||++...++.+++++.
T Consensus        89 fAYGqTGSGKTyTm~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~  167 (365)
T 2y65_A           89 FAYGQTSSGKTHTMEGV-IGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKN  167 (365)
T ss_dssp             EEECSTTSSHHHHHTBS-TTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEECSS
T ss_pred             EeecCCCCCCceEEecC-CCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCCceEEECCC
Confidence            79999999999999884 345677899999999999988543    4689999999999999999999888999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|++++.|.|++|++.+|..|..+|..++|.+|..|||||+||+|+|.+....                     
T Consensus       168 ~~-~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---------------------  225 (365)
T 2y65_A          168 RV-PYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE---------------------  225 (365)
T ss_dssp             SC-EEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT---------------------
T ss_pred             CC-EEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC---------------------
Confidence            55 88999999999999999999999999999999999999999999999999875331                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+||||++|+
T Consensus       226 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~  305 (365)
T 2y65_A          226 NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTT  305 (365)
T ss_dssp             TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEE
T ss_pred             CCCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEE
Confidence            11346799999999999999999999999999999999999999999999987 57999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||+||+|+..+++||++||+||+|+++|+|.
T Consensus       306 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~  336 (365)
T 2y65_A          306 IVICCSPASFNESETKSTLDFGRRAKTVKNV  336 (365)
T ss_dssp             EEEEECCBGGGHHHHHHHHHHHHHHTTCEEE
T ss_pred             EEEEecCccCCHHHHHHHHHHHHHHhcccCc
Confidence            9999999999999999999999999999985

>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}

Probab=100.00  E-value=1.3e-69  Score=475.00  Aligned_cols=238  Identities=41%  Similarity=0.606  Sum_probs=208.1

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCC-CCcCcc--c
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEK-VNIPIN--E   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~--~   73 (267)
                      ||||||||||||||+|    ..+++|||||++++||..+...    .+.|.+||+|||||+++|||++.. ..+.++  +
T Consensus        85 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~  160 (330)
T 2h58_A           85 FAYGQTGAGKTYTMEG----TAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCP  160 (330)
T ss_dssp             EEESSTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECT
T ss_pred             EeECCCCCCCcEEEec----CCCCCcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEee
Confidence            7999999999999966    4567999999999999988653    458999999999999999998753 334444  4


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. |.+++.|+++++|.|++|++++|+.|.++|..++|.+|..|||||+||+|++.+....                  
T Consensus       161 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------  221 (330)
T 2h58_A          161 DGS-GQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCS------------------  221 (330)
T ss_dssp             TSS-CCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETT------------------
T ss_pred             cCC-CCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecC------------------
Confidence            554 5599999999999999999999999999999999999999999999999999775321                  


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         .+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++
T Consensus       222 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~  298 (330)
T 2h58_A          222 ---TGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSK  298 (330)
T ss_dssp             ---TTEEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCE
T ss_pred             ---CCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCce
Confidence               12356899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      |+||+||+|+..+++||++||+||+|+++|.
T Consensus       299 t~mI~~isP~~~~~~ETl~TL~fA~rak~i~  329 (330)
T 2h58_A          299 TLMVVQVSPVEKNTSETLYSLKFAERVRSVE  329 (330)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred             EEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence            9999999999999999999999999999985

>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.7e-71  Score=489.35  Aligned_cols=241  Identities=38%  Similarity=0.550  Sum_probs=196.6

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-------CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-------TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-------~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~   73 (267)
                      ||||||||||||||+|    ..+++|||||++++||+.+..       ..+.|.+||+|||||+|+|||+|....+.+++
T Consensus       103 fAYGqTGSGKTyTM~G----~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ire  178 (388)
T 3bfn_A          103 LAYGPTGAGKTHTMLG----SPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIRE  178 (388)
T ss_dssp             EEESCTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCCCEE
T ss_pred             eeecCCCCCCCeEeec----CccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCCceEEE
Confidence            7999999999999966    456789999999999998753       23589999999999999999999888999999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|+++++|.|++|++.+|..|.++|..++|.+|..|||||+||+|+|.+.....                 
T Consensus       179 d~~~~-v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~-----------------  240 (388)
T 3bfn_A          179 DCRGN-ILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLA-----------------  240 (388)
T ss_dssp             CTTSC-EECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESST-----------------
T ss_pred             cCCCC-EEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCC-----------------
Confidence            98754 999999999999999999999999999999999999999999999999998753211                 


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+||||++
T Consensus       241 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnsk  317 (388)
T 3bfn_A          241 ---PFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAH  317 (388)
T ss_dssp             ---TCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCE
T ss_pred             ---CCceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCcc
Confidence               11246799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+||+|+..+++||++||+||+|+++|+|.
T Consensus       318 T~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~  350 (388)
T 3bfn_A          318 SILIANIAPERRFYLDTVSALNFAARSKEVINR  350 (388)
T ss_dssp             EEEEEEECCSGGGHHHHHHHHHHHCSEEEEC--
T ss_pred             EEEEEEECCccccHHHHHHHHHHHHHHhhCcCc
Confidence            999999999999999999999999999999884

>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*

Probab=100.00  E-value=9.6e-70  Score=481.23  Aligned_cols=240  Identities=39%  Similarity=0.612  Sum_probs=221.6

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCC---CCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEK---VNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~---~~~~i~~   73 (267)
                      ||||||||||||||+|    +..++|||||++++||..+...    .+.|.+||+|||||+++|||+|..   ..+.+++
T Consensus        84 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e  159 (369)
T 3cob_A           84 FAYGQTGSGKTFTIYG----ADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKK  159 (369)
T ss_dssp             EEEECTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEE
T ss_pred             EEECCCCCCCeEeecC----CCCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEE
Confidence            7999999999999966    3467999999999999988654    458999999999999999999853   4788999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. |.+++.|++++.|.|++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....                  
T Consensus       160 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------  220 (369)
T 3cob_A          160 DSK-GMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ------------------  220 (369)
T ss_dssp             CTT-SCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT------------------
T ss_pred             CCC-CCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC------------------
Confidence            986 4599999999999999999999999999999999999999999999999999875321                  


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||+|+||||++
T Consensus       221 ---~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnsk  297 (369)
T 3cob_A          221 ---TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK  297 (369)
T ss_dssp             ---TCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSE
T ss_pred             ---CCcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCcc
Confidence               12357899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+||+|+..+++||++||+||+|+++|+|.
T Consensus       298 t~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~  330 (369)
T 3cob_A          298 TLMFVNISPAESNLDETHNSLTYASRVRSIVND  330 (369)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCC
T ss_pred             EEEEEEeCCccccHHHHHHHHHHHHHHhhcccC
Confidence            999999999999999999999999999999885

>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}

Probab=100.00  E-value=3.9e-70  Score=485.30  Aligned_cols=248  Identities=38%  Similarity=0.599  Sum_probs=204.8

Q ss_pred             CcccCCccCccccccccCC-------CCCCCcChHHHHHHHHHHhccc--CCCeEEEEEEEEecCceeecCCCCC-CCcC
Q 024439            1 MAYGQTGTGKTYTLGRLGK-------DDASERGIMVRALEDIISSMSV--TSDSVEVSYLQLYMESIQDLLAPEK-VNIP   70 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~-------~~~~~~Gli~r~~~~lf~~~~~--~~~~v~~S~~EIy~e~v~DLL~~~~-~~~~   70 (267)
                      ||||||||||||||+|...       ....++|||||++++||..+..  ..+.|.+||+|||||+++|||++.. ..+.
T Consensus       105 fAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~  184 (373)
T 2wbe_C          105 FAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTDDTTKIR  184 (373)
T ss_dssp             EEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEESSCTTSCSCCC
T ss_pred             EeecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhcCceEEEEEEEEEEeCCeEEECCCCCCCCCce
Confidence            7999999999999988543       2345789999999999998754  4578999999999999999999754 4677


Q ss_pred             cccCC-CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccc
Q 024439           71 INEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRT  149 (267)
Q Consensus        71 i~~~~-~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~  149 (267)
                      +++++ ..|.+++.|+++++|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+....              
T Consensus       185 i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------  250 (373)
T 2wbe_C          185 IFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENG--------------  250 (373)
T ss_dssp             EEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTC--------------
T ss_pred             eEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCC--------------
Confidence            77775 457799999999999999999999999999999999999999999999999999764211              


Q ss_pred             cCCCCCCCCceeeeeEEEEECCCCccccccCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhc
Q 024439          150 ELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSE-GPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF  228 (267)
Q Consensus       150 ~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~-~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l  228 (267)
                          .........|+|+||||||||+..+.+.. +.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+|
T Consensus       251 ----~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsL  326 (373)
T 2wbe_C          251 ----IEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESL  326 (373)
T ss_dssp             ----TTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHH
T ss_pred             ----CCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHh
Confidence                11223457899999999999999988877 8999999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          229 GGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       229 ~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |||++|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus       327 gGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~  364 (373)
T 2wbe_C          327 GGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNK  364 (373)
T ss_dssp             HSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEC
T ss_pred             CCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccc
Confidence            99999999999999999999999999999999999985

>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}

Probab=100.00  E-value=3.6e-70  Score=481.31  Aligned_cols=241  Identities=40%  Similarity=0.614  Sum_probs=196.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|    ..+++|||||++++||+.+...    .+.|.+||+|||||+++|||++ ...+.+++++.
T Consensus        94 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~i~e~~~  168 (350)
T 2vvg_A           94 FAYGQTGAGKTWTMGG----NKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-NTKLPLKEDKT  168 (350)
T ss_dssp             EEECSTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-EEEECEEEETT
T ss_pred             EeecCCCCCCCEEeec----CCccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC-CcCceeeEcCC
Confidence            7999999999999966    4477999999999999988632    4589999999999999999995 45788999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|+++++|.+++|++++|..|.++|..++|.+|..|||||+||+|+|.+....                   ..
T Consensus       169 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-------------------~~  228 (350)
T 2vvg_A          169 RG-IYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI-------------------EN  228 (350)
T ss_dssp             TE-EEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----------------------
T ss_pred             CC-EEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeecc-------------------CC
Confidence            55 99999999999999999999999999999999999999999999999999875331                   11


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL  236 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~  236 (267)
                      ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|+|
T Consensus       229 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m  308 (350)
T 2vvg_A          229 KEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLM  308 (350)
T ss_dssp             -CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEE
T ss_pred             CccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEE
Confidence            12457899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          237 IITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       237 I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+|...+++||++||+||+|+++|+|.
T Consensus       309 I~~isP~~~~~~ETl~TL~fA~rak~i~n~  338 (350)
T 2vvg_A          309 CANISPASTNYDETMSTLRYADRAKQIKNK  338 (350)
T ss_dssp             EEEECCBGGGHHHHHHHHHHHHHHTTCBCC
T ss_pred             EEEeCCccccHHHHHHHHHHHHHHhhcccc
Confidence            999999999999999999999999999985

>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.8e-70  Score=484.27  Aligned_cols=242  Identities=35%  Similarity=0.476  Sum_probs=192.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCC-----CCCcC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPE-----KVNIP   70 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~-----~~~~~   70 (267)
                      ||||||||||||||+|...++.+++|||||++++||+.+..     ..+.|.+||+|||||+|+|||++.     ...+.
T Consensus       120 fAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~  199 (376)
T 2rep_A          120 FAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECE  199 (376)
T ss_dssp             EEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CC
T ss_pred             EEeCCCCCCCceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCce
Confidence            79999999999999887655677899999999999998754     246899999999999999999984     23577


Q ss_pred             cccCC-CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccc
Q 024439           71 INEDP-KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRT  149 (267)
Q Consensus        71 i~~~~-~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~  149 (267)
                      +++++ ..+.+++.|+++++|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....              
T Consensus       200 ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~--------------  265 (376)
T 2rep_A          200 IRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSS--------------  265 (376)
T ss_dssp             EEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESS--------------
T ss_pred             EEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC--------------
Confidence            88773 345699999999999999999999999999999999999999999999999999875321              


Q ss_pred             cCCCCCCCCceeeeeEEEEECCCCccccccCCCc----hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhH
Q 024439          150 ELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEG----PLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLR  225 (267)
Q Consensus       150 ~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~----~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~  225 (267)
                             ......|+|+||||||||+..++...+    .+++|+..||+||.+|++||.+|++++.|||||+||||+|||
T Consensus       266 -------~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLT~LLq  338 (376)
T 2rep_A          266 -------RGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQ  338 (376)
T ss_dssp             -------SCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCGGGSHHHHHTG
T ss_pred             -------CCcEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcCCHHHHHHH
Confidence                   113467999999999999999988888    899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          226 DSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       226 ~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+||||++|+||+||+|+..+++||++||+||+|++++
T Consensus       339 dsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~  376 (376)
T 2rep_A          339 NSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC  376 (376)
T ss_dssp             GGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred             HhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999874

>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...

Probab=100.00  E-value=1.2e-70  Score=486.65  Aligned_cols=248  Identities=40%  Similarity=0.593  Sum_probs=208.1

Q ss_pred             CcccCCccCccccccccCCC-------CCCCcChHHHHHHHHHHhcccC--CCeEEEEEEEEecCceeecCCCCC---CC
Q 024439            1 MAYGQTGTGKTYTLGRLGKD-------DASERGIMVRALEDIISSMSVT--SDSVEVSYLQLYMESIQDLLAPEK---VN   68 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~-------~~~~~Gli~r~~~~lf~~~~~~--~~~v~~S~~EIy~e~v~DLL~~~~---~~   68 (267)
                      ||||||||||||||+|....       ..+.+|||||++++||+.+...  .+.|.+||+|||||+++|||+|..   ..
T Consensus        93 fAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~  172 (359)
T 1x88_A           93 FAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER  172 (359)
T ss_dssp             EEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTSCTTCC
T ss_pred             EEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhccCceEEEEEEEEEEeCceeeehhccccccccc
Confidence            79999999999999885332       1235799999999999998764  458999999999999999999864   35


Q ss_pred             cCcccCCC-CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccc
Q 024439           69 IPINEDPK-TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDT  147 (267)
Q Consensus        69 ~~i~~~~~-~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~  147 (267)
                      +.+++++. .+.+++.|++++.|.|++|++++|..|..+|..++|.+|..|||||+||+|+|.+.....           
T Consensus       173 l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~-----------  241 (359)
T 1x88_A          173 LQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTI-----------  241 (359)
T ss_dssp             BEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECT-----------
T ss_pred             ceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccC-----------
Confidence            78888874 345899999999999999999999999999999999999999999999999997753311           


Q ss_pred             cccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh
Q 024439          148 RTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       148 ~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~  227 (267)
                             +.......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+
T Consensus       242 -------~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqds  314 (359)
T 1x88_A          242 -------DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDS  314 (359)
T ss_dssp             -------TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGG
T ss_pred             -------CCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHH
Confidence                   1122456899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||||++|+||+||+|+..+++||++||+||+|+++|+|.
T Consensus       315 LgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~  353 (359)
T 1x88_A          315 LGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNK  353 (359)
T ss_dssp             SSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCC
T ss_pred             hCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCc
Confidence            999999999999999999999999999999999999985

>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*

Probab=100.00  E-value=1.6e-70  Score=486.21  Aligned_cols=246  Identities=41%  Similarity=0.652  Sum_probs=211.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC-CCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK-VNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~~~   76 (267)
                      ||||||||||||||+|. .++++++|||||++++||..+...   .+.|.+||+|||||+|+|||++.. ..+.+++++.
T Consensus       106 fAYGqTGSGKTyTM~G~-~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~  184 (372)
T 3b6u_A          106 FAYGQTGTGKTYTMEGI-RGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPD  184 (372)
T ss_dssp             EEEESTTSSHHHHHTBC-TTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETT
T ss_pred             EeecCCCCCCCEeEecC-CCCcccCCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCC
Confidence            79999999999999874 345667899999999999988653   458999999999999999999864 5789999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|++++.|.|++|++++|..|..+|..++|.+|..|||||+||+|+|.+.....                  +.
T Consensus       185 ~~-v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~------------------~~  245 (372)
T 3b6u_A          185 TG-VYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGL------------------DG  245 (372)
T ss_dssp             TE-EEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----------------------
T ss_pred             Cc-EecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCC------------------CC
Confidence            55 999999999999999999999999999999999999999999999999998753211                  11


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++ .|||||+||||+||||+||||++|+
T Consensus       246 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~  325 (372)
T 3b6u_A          246 ENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTV  325 (372)
T ss_dssp             CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEE
T ss_pred             CcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEE
Confidence            234578999999999999999999999999999999999999999999999865 5999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||+||+|+..+++||++||+||+|+++|+|.
T Consensus       326 mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~  356 (372)
T 3b6u_A          326 MVANVGPASYNVEETLTTLRYANRAKNIKNK  356 (372)
T ss_dssp             EEEEECCBGGGHHHHHHHHHHHHHHTTCBCC
T ss_pred             EEEEeCCcccCHHHHHHHHHHHHHHhhcccc
Confidence            9999999999999999999999999999985

>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*

Probab=100.00  E-value=2.2e-69  Score=476.66  Aligned_cols=238  Identities=33%  Similarity=0.461  Sum_probs=203.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCC--------
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKV--------   67 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~--------   67 (267)
                      ||||||||||||||+|.      ++|||||++++||..+..     ..+.|.+||+|||||+|+|||++...        
T Consensus        89 fAYGqTGSGKTyTM~G~------~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~  162 (347)
T 1f9v_A           89 FAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIG  162 (347)
T ss_dssp             EEECCTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC------------
T ss_pred             EEECCCCCCCcEeccCC------CCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccC
Confidence            79999999999999763      469999999999998753     35689999999999999999998643        


Q ss_pred             -CcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439           68 -NIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD  146 (267)
Q Consensus        68 -~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~  146 (267)
                       .+.+++++..+.+++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+....           
T Consensus       163 ~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-----------  231 (347)
T 1f9v_A          163 LKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAK-----------  231 (347)
T ss_dssp             -CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC------------
T ss_pred             CceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCC-----------
Confidence             46777776667799999999999999999999999999999999999999999999999999875321           


Q ss_pred             ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHh
Q 024439          147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRL  223 (267)
Q Consensus       147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~l  223 (267)
                                .+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++   .|||||+||||+|
T Consensus       232 ----------~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~l  301 (347)
T 1f9v_A          232 ----------TGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYL  301 (347)
T ss_dssp             -----------CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHH
T ss_pred             ----------CCceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHH
Confidence                      123467999999999999999999999999999999999999999999999876   7999999999999


Q ss_pred             hHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       224 L~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      |||+||||++|+||+||+|+..+++||++||+||+|+++|..
T Consensus       302 LqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~  343 (347)
T 1f9v_A          302 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL  343 (347)
T ss_dssp             HHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTT
T ss_pred             HHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhcc
Confidence            999999999999999999999999999999999999999875

>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9

Probab=100.00  E-value=5.4e-69  Score=475.31  Aligned_cols=240  Identities=37%  Similarity=0.590  Sum_probs=192.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCC--CCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPE--KVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~   73 (267)
                      ||||||||||||||+|    ..+++|||||++++||..+..     ..+.|.+||+|||||+|+|||+|.  ...+.+++
T Consensus        97 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e  172 (354)
T 3gbj_A           97 FAYGQTGSGKSYTMMG----TADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVRE  172 (354)
T ss_dssp             EEEECTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC-
T ss_pred             EeeCCCCCCCceEEec----CCCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEE
Confidence            7999999999999966    456789999999999987743     235899999999999999999985  35789999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|+|.+.....                 
T Consensus       173 ~~~~g-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-----------------  234 (354)
T 3gbj_A          173 HSVLG-PYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDV-----------------  234 (354)
T ss_dssp             ------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECT-----------------
T ss_pred             cCCCC-EEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEeccc-----------------
Confidence            98766 889999999999999999999999999999999999999999999999998753321                 


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhc------CCCCCCCCCchhhHhhHHh
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAE------NSPHIPTRDSKLTRLLRDS  227 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~------~~~~ipyr~SkLT~lL~~~  227 (267)
                      .........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++      +..|||||+||||+||||+
T Consensus       235 ~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqds  314 (354)
T 3gbj_A          235 KSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDS  314 (354)
T ss_dssp             TSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHH
T ss_pred             CCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHH
Confidence            1111234679999999999999999999999999999999999999999999986      3469999999999999999


Q ss_pred             cCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhh
Q 024439          228 FGGSARTSLIITVGPSARNHAETTSTIMFGQRGSI  262 (267)
Q Consensus       228 l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~  262 (267)
                      ||||++|+||+||+|+..+++||++||+||+||+.
T Consensus       315 LgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~  349 (354)
T 3gbj_A          315 LGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH  349 (354)
T ss_dssp             HSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred             hCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999975

>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0

Probab=100.00  E-value=1.8e-69  Score=478.49  Aligned_cols=239  Identities=40%  Similarity=0.582  Sum_probs=190.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|    ..+++|||||++++||..+...    .+.|.+||+|||||+++|||++. .++.+++++.
T Consensus       110 fAYGqTGSGKTyTm~G----~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~l~ire~~~  184 (355)
T 3lre_A          110 LAYGATGAGKTHTMLG----SADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS-GPLAVREDTQ  184 (355)
T ss_dssp             EEECCTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEESSSCC-CCBEEEECTT
T ss_pred             EEeCCCCCCceeeecc----CCCCCCeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEECcCCC-CCceeEEcCC
Confidence            7999999999999965    4567899999999999987653    34899999999999999999974 5789999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.|++++.|.|++|++.+|..|.++|..++|.+|..|||||+||+|++.+.....                  ..
T Consensus       185 ~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~------------------~~  245 (355)
T 3lre_A          185 KG-VVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTA------------------SI  245 (355)
T ss_dssp             SC-EEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTS------------------CT
T ss_pred             CC-EEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCC------------------CC
Confidence            66 899999999999999999999999999999999999999999999999998763321                  11


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCCchhhHhhHHhcCCCCe
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                      ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++   .|+|||+||||+||||+|||||+
T Consensus       246 ~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnsk  325 (355)
T 3lre_A          246 NQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQ  325 (355)
T ss_dssp             TCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSE
T ss_pred             CCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCce
Confidence            123467999999999999999999999999999999999999999999998753   49999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+||+||+|+..+++||++||+||+||++|
T Consensus       326 t~mIa~isP~~~~~~ETl~TL~fA~rak~I  355 (355)
T 3lre_A          326 TIMIAAVSPSSVFYDDTYNTLKYANRAKDI  355 (355)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred             EEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999986

>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}

Probab=100.00  E-value=2.9e-69  Score=475.75  Aligned_cols=243  Identities=36%  Similarity=0.498  Sum_probs=211.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC--CCcCcccCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK--VNIPINEDP   75 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~--~~~~i~~~~   75 (267)
                      ||||||||||||||+|    ..+++|||||++++||+.+...   .+.|.+||+|||||+|+|||++..  .++.+++++
T Consensus        82 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~  157 (349)
T 1t5c_A           82 FAYGQTASGKTYTMMG----SEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDV  157 (349)
T ss_dssp             EEEESTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETT
T ss_pred             eeecCCCCCCCeEEec----CCCCCchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECC
Confidence            7999999999999966    4567999999999999998764   458999999999999999998754  578899998


Q ss_pred             CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439           76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN  155 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (267)
                      ..| +++.|++++.|.+++|++.+|..|.++|..++|.+|..|||||+||+|++.+......                ..
T Consensus       158 ~~~-~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------------~~  220 (349)
T 1t5c_A          158 NRN-VYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEP----------------SN  220 (349)
T ss_dssp             TTE-EEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC--------------------
T ss_pred             CCC-EEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCC----------------cC
Confidence            754 9999999999999999999999999999999999999999999999999987633211                01


Q ss_pred             CCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCchhhHhhHHhcCCCCe
Q 024439          156 HVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS--PHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       156 ~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~--~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                      .......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++  .|||||+||||+||||+||||++
T Consensus       221 ~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnsk  300 (349)
T 1t5c_A          221 CEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAK  300 (349)
T ss_dssp             ---CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSE
T ss_pred             cCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCce
Confidence            1124578999999999999999999999999999999999999999999999875  59999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+||+|.  +++||++||+||+||++|+|.
T Consensus       301 t~mI~~isP~--~~~ETlsTL~fA~rak~I~n~  331 (349)
T 1t5c_A          301 TRIICTITPV--SFDETLTALQFASTAKYMKNT  331 (349)
T ss_dssp             EEEEEEECTT--CSHHHHHHHHHHHHHTTCCCC
T ss_pred             EEEEEEeCCC--CHHHHHHHHHHHHHHhhcccC
Confidence            9999999997  599999999999999999985

>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9

Probab=100.00  E-value=8e-69  Score=474.36  Aligned_cols=239  Identities=31%  Similarity=0.452  Sum_probs=206.4

Q ss_pred             CcccCCccCccccccccC-CCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCCCCCcCcccCC
Q 024439            1 MAYGQTGTGKTYTLGRLG-KDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDP   75 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~-~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~   75 (267)
                      ||||||||||||||+|.. .+..+++|||||++++||..+..    ..+.|.+||+|||||+|+|||++.. .+.+++++
T Consensus        89 fAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~-~~~~~e~~  167 (360)
T 1ry6_A           89 FAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK-MVAALENG  167 (360)
T ss_dssp             EEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC-----------
T ss_pred             EeeCCCCCCCCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCCc-cceeeEcC
Confidence            799999999999998853 23457899999999999998753    3568999999999999999999753 45677777


Q ss_pred             CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439           76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN  155 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (267)
                      ..| +++.|+++++|.+++|++++|..|.++|..++|.+|..|||||+||+|++.+...                     
T Consensus       168 ~~~-~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~---------------------  225 (360)
T 1ry6_A          168 KKE-VVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINK---------------------  225 (360)
T ss_dssp             -CC-BCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTT---------------------
T ss_pred             CCC-EEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEeccC---------------------
Confidence            644 8999999999999999999999999999999999999999999999999976311                     


Q ss_pred             CCCceeeeeEEEEECCCCccccccCCCc-hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439          156 HVPLVRKSKLLIVDLAGSERIDKSGSEG-PLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       156 ~~~~~~~s~l~fvDLagse~~~~~~~~~-~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                         ....|+|+||||||||+..++...+ .+.+|+..||+||.+|++||.+|++++.|+|||+||||+||||+||||++|
T Consensus       226 ---~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt  302 (360)
T 1ry6_A          226 ---NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKS  302 (360)
T ss_dssp             ---TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEE
T ss_pred             ---CcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeE
Confidence               2357999999999999988887665 567899999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      +||+||+|+..+++||++||+||+|+++|+|
T Consensus       303 ~mIa~isP~~~~~~ETlsTLrfA~rak~i~n  333 (360)
T 1ry6_A          303 IMIANISPTISCCEQTLNTLRYSSRVKNKGN  333 (360)
T ss_dssp             EEEEEECCBGGGHHHHHHHHHHHHHHCC---
T ss_pred             EEEEEeCCCcccHHHHHHHHHHHHHHhhccc
Confidence            9999999999999999999999999999988

>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}

Probab=100.00  E-value=8.1e-69  Score=473.71  Aligned_cols=237  Identities=34%  Similarity=0.452  Sum_probs=195.9

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCC---------
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEK---------   66 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~---------   66 (267)
                      ||||||||||||||+|.      ++|||||++++||+.+..     ..+.|.+||+|||||+|+|||++..         
T Consensus        90 fAYGqTGSGKTyTm~g~------~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~  163 (349)
T 3t0q_A           90 FAYGQTGSGKTYTMLNA------GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEIL  163 (349)
T ss_dssp             EEECSTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC------------
T ss_pred             EEeCCCCCCCceEeCCC------CCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhcccccccccccccccc
Confidence            79999999999999763      359999999999997653     2468999999999999999998743         


Q ss_pred             --CCcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccc
Q 024439           67 --VNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEE  144 (267)
Q Consensus        67 --~~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~  144 (267)
                        ..+.+++++..+.+++.|+++++|.+++|+..+|..|.++|..+++.+|..|||||+||+|+|.+....         
T Consensus       164 ~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---------  234 (349)
T 3t0q_A          164 DSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLH---------  234 (349)
T ss_dssp             ---CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETT---------
T ss_pred             ccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecC---------
Confidence              456777777666699999999999999999999999999999999999999999999999999876332         


Q ss_pred             ccccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCchhh
Q 024439          145 KDTRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLT  221 (267)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~---~ipyr~SkLT  221 (267)
                                  .+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.   |||||+||||
T Consensus       235 ------------~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT  302 (349)
T 3t0q_A          235 ------------TGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLT  302 (349)
T ss_dssp             ------------TCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHH
T ss_pred             ------------CCCeeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHH
Confidence                        1134679999999999999999999999999999999999999999999987654   9999999999


Q ss_pred             HhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          222 RLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       222 ~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      +||||+||||++|+||+||+|+..+++||++||+||+|++.|.
T Consensus       303 ~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik  345 (349)
T 3t0q_A          303 YLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTK  345 (349)
T ss_dssp             HHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcc
Confidence            9999999999999999999999999999999999999999875

>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}

Probab=100.00  E-value=6e-69  Score=486.47  Aligned_cols=242  Identities=36%  Similarity=0.608  Sum_probs=200.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-------CCeEEEEEEEEecCceeecCCCC-----CCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-------SDSVEVSYLQLYMESIQDLLAPE-----KVN   68 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-------~~~v~~S~~EIy~e~v~DLL~~~-----~~~   68 (267)
                      ||||||||||||||+|    ..+++|||||++++||..+...       .+.|.+||+|||||+|+|||+|.     ...
T Consensus       141 fAYGQTGSGKTyTM~G----~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~  216 (443)
T 2owm_A          141 FAYGQTGSGKSYTMMG----TPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYY  216 (443)
T ss_dssp             EEESSTTSSHHHHHTC----CTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCC
T ss_pred             EEeCCCCCCCCEEeec----CCCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccc
Confidence            7999999999999965    4567899999999999987542       45899999999999999999973     235


Q ss_pred             cCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccccc
Q 024439           69 IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTR  148 (267)
Q Consensus        69 ~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~  148 (267)
                      +.+++++..| +++.|++++.|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+......           
T Consensus       217 l~ire~~~~g-~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~-----------  284 (443)
T 2owm_A          217 LKVRESPTEG-PYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLE-----------  284 (443)
T ss_dssp             CEEEEETTTE-EEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC---------------
T ss_pred             cceeECCCCC-EeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccC-----------
Confidence            8899998755 8999999999999999999999999999999999999999999999999987533210           


Q ss_pred             ccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC------------------
Q 024439          149 TELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS------------------  210 (267)
Q Consensus       149 ~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~------------------  210 (267)
                            ........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++                  
T Consensus       285 ------~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~  358 (443)
T 2owm_A          285 ------TDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTP  358 (443)
T ss_dssp             ---------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC--------------------
T ss_pred             ------CCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHHHHHHhccccccccccccccccccccc
Confidence                  01123467999999999999999999999999999999999999999999998743                  


Q ss_pred             ----CCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          211 ----PHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       211 ----~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                          .||||||||||+||||+||||++|+||+||+|+  +++||++||+||+||++|+|.
T Consensus       359 ~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~  416 (443)
T 2owm_A          359 GPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTR  416 (443)
T ss_dssp             -----CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEEC
T ss_pred             ccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhcccc
Confidence                389999999999999999999999999999997  599999999999999999875

>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*

Probab=100.00  E-value=4.1e-69  Score=475.15  Aligned_cols=247  Identities=41%  Similarity=0.605  Sum_probs=194.4

Q ss_pred             CcccCCccCccccccccCCC--CCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCC--CCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKD--DASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPE--KVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~--~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~--~~~~~i~~   73 (267)
                      ||||||||||||||+|....  ..+++|||||++++||+.+...   .+.|.+||+|||||+++|||++.  ...+.+++
T Consensus        88 fAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e  167 (344)
T 4a14_A           88 FAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLRE  167 (344)
T ss_dssp             EEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEE
T ss_pred             EEecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccceeee
Confidence            79999999999999775322  2467999999999999988654   45899999999999999999864  34688999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. |.+++.|++++.|.+++|++++|..|.++|..+++.+|..|||||+||+|+|.+........             .
T Consensus       168 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~-------------~  233 (344)
T 4a14_A          168 DER-GNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRL-------------P  233 (344)
T ss_dssp             CTT-SCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC--------------------
T ss_pred             ccC-CCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccC-------------C
Confidence            987 45999999999999999999999999999999999999999999999999998864321100             0


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCchhhHhhHHhcCC
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRLLRDSFGG  230 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~---~~~ipyr~SkLT~lL~~~l~g  230 (267)
                      .........|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++   ..|||||+||||+||||+|||
T Consensus       234 ~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgG  313 (344)
T 4a14_A          234 RPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGG  313 (344)
T ss_dssp             -----CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSST
T ss_pred             CccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCC
Confidence            11223467899999999999999999999999999999999999999999999874   359999999999999999999


Q ss_pred             CCeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439          231 SARTSLIITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      |++|+||+||+|...+++||++||+||+||+
T Consensus       314 nskt~mI~~vsP~~~~~~ETl~TL~fA~rAk  344 (344)
T 4a14_A          314 NAKTVMIACVSPSSSDFDETLNTLNYASRAQ  344 (344)
T ss_dssp             TSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred             CcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence            9999999999999999999999999999986

>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-69  Score=477.54  Aligned_cols=241  Identities=40%  Similarity=0.586  Sum_probs=195.1

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC---CCeEEEEEEEEecCceeecCCCCC------CCcCc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT---SDSVEVSYLQLYMESIQDLLAPEK------VNIPI   71 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~---~~~v~~S~~EIy~e~v~DLL~~~~------~~~~i   71 (267)
                      ||||||||||||||+|.. .+.+++|||||++++||+.+...   .+.|.+||+|||||+++|||++..      ..+.+
T Consensus       109 fAYGQTGSGKTyTM~G~~-~~~~~~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~  187 (359)
T 3nwn_A          109 MCYGQTGAGKTYTMMGAT-ENYKHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTI  187 (359)
T ss_dssp             EEEESTTSSHHHHHTBCS-SCGGGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEE
T ss_pred             EEeCCCCCCccEEeCCcc-CCccchhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeccccccccccccccccccccceE
Confidence            799999999999998853 34567899999999999987554   468999999999999999998632      23555


Q ss_pred             ccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccC
Q 024439           72 NEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTEL  151 (267)
Q Consensus        72 ~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~  151 (267)
                      ++++. | +++.|++++.|.+++|++++|..|..+|..++|.+|..|||||+||+|+|.+......              
T Consensus       188 ~~~~~-g-~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~--------------  251 (359)
T 3nwn_A          188 VENPQ-G-VFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLS--------------  251 (359)
T ss_dssp             EEETT-E-EEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------------------
T ss_pred             EecCC-c-eEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeeccccc--------------
Confidence            66653 5 8899999999999999999999999999999999999999999999999977533211              


Q ss_pred             CCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCC
Q 024439          152 PGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGG  230 (267)
Q Consensus       152 ~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g  230 (267)
                           ......|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|+++ ..|||||+||||+||||+|||
T Consensus       252 -----~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgG  326 (359)
T 3nwn_A          252 -----EEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGG  326 (359)
T ss_dssp             -------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSS
T ss_pred             -----CcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCC
Confidence                 12346799999999999999999999999999999999999999999999875 469999999999999999999


Q ss_pred             CCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          231 SARTSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       231 ~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      ||+|+||+||+|...+++||++||+||+||++|
T Consensus       327 nskt~mI~~isP~~~~~~ETlsTL~fA~rak~I  359 (359)
T 3nwn_A          327 NCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV  359 (359)
T ss_dssp             SSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred             CccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999986

>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*

Probab=100.00  E-value=2.1e-68  Score=473.97  Aligned_cols=238  Identities=33%  Similarity=0.462  Sum_probs=189.6

Q ss_pred             CcccCCccCccccccccC--CCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLG--KDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~--~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~   73 (267)
                      ||||||||||||||+|..  .....++|||||++++||..+..     ..+.|.+||+|||||+|+|||++. ..+.+++
T Consensus       139 fAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~-~~l~i~e  217 (387)
T 2heh_A          139 FAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK-AKLRVLE  217 (387)
T ss_dssp             EEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT-EECEEEE
T ss_pred             EEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC-ccceEEE
Confidence            799999999999998842  22356789999999999998754     467999999999999999999974 5688999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|+++++|.|++|++++|..|.++|..++|.+|..|||||+||+|+|.+..                    
T Consensus       218 d~~~~-v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~--------------------  276 (387)
T 2heh_A          218 DGKQQ-VQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG--------------------  276 (387)
T ss_dssp             CTTCC-EEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESSS--------------------
T ss_pred             cCCCC-EEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECC--------------------
Confidence            98755 999999999999999999999999999999999999999999999999997631                    


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh-cCCC
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS-FGGS  231 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~-l~g~  231 (267)
                            ...|+|+||||||||+..+.. ..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+ ||||
T Consensus       277 ------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgn  350 (387)
T 2heh_A          277 ------RMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN  350 (387)
T ss_dssp             ------SEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTT
T ss_pred             ------eeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCC
Confidence                  257999999999999987665 45667789999999999999999999999999999999999999999 5999


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ++|+||+||+|+..+++||++||+||+|+++|+++
T Consensus       351 skT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~  385 (387)
T 2heh_A          351 SRTCMIATISPGISSCEYTLNTLRYADRVKELSPH  385 (387)
T ss_dssp             EEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred             CeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence            99999999999999999999999999999999864

>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*

Probab=100.00  E-value=1.2e-67  Score=471.67  Aligned_cols=236  Identities=32%  Similarity=0.464  Sum_probs=192.3

Q ss_pred             CcccCCccCccccccccC--CCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLG--KDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~--~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~   73 (267)
                      ||||||||||||||+|..  .....++|||||++++||..+..     ..+.|.+||+|||||+|+|||++. ..+.+++
T Consensus       159 fAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-~~l~i~e  237 (410)
T 1v8k_A          159 FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK-AKLRVLE  237 (410)
T ss_dssp             EEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT-EEEEEEE
T ss_pred             EeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC-CCceEEE
Confidence            799999999999998842  23356789999999999998753     457999999999999999999974 5688999


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|++++.|.|++|++.+|..|..+|..++|.+|..|||||+||+|+|.+..                    
T Consensus       238 d~~~~-v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~--------------------  296 (410)
T 1v8k_A          238 DSRQQ-VQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG--------------------  296 (410)
T ss_dssp             CSSCC-EEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS--------------------
T ss_pred             CCCCC-eEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC--------------------
Confidence            98755 999999999999999999999999999999999999999999999999997631                    


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh-cCCC
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSG-SEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS-FGGS  231 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~-~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~-l~g~  231 (267)
                            ...|+|+||||||||+..+.. ..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+ ||||
T Consensus       297 ------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgn  370 (410)
T 1v8k_A          297 ------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN  370 (410)
T ss_dssp             ------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSS
T ss_pred             ------cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCC
Confidence                  157999999999999987665 45567789999999999999999999999999999999999999999 5999


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      ++|+||+||+|+..+++||++||+||+|+++|-
T Consensus       371 skT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~  403 (410)
T 1v8k_A          371 SRTCMIAMISPGISSCEYTLNTLRYADRVKELS  403 (410)
T ss_dssp             EEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEEeCCccccHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999874

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-67  Score=473.82  Aligned_cols=238  Identities=34%  Similarity=0.482  Sum_probs=207.8

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCC---------
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEK---------   66 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~---------   66 (267)
                      ||||||||||||||+|.      ++|||||++++||..+..     ..+.|.+||+|||||+|+|||++..         
T Consensus       145 fAYGqTGSGKTyTM~g~------~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~  218 (403)
T 4etp_A          145 FAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIG  218 (403)
T ss_dssp             EEESCTTSSHHHHHHCT------TTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCS
T ss_pred             EEECCCCCCCceEeCCC------CCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccC
Confidence            79999999999999763      359999999999997753     2468999999999999999998753         


Q ss_pred             CCcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439           67 VNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD  146 (267)
Q Consensus        67 ~~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~  146 (267)
                      ..+.+++++..+.+++.|++++.|.+++|+..+|..|..+|..++|.+|..|||||+||+|+|.+....           
T Consensus       219 ~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-----------  287 (403)
T 4etp_A          219 LKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAK-----------  287 (403)
T ss_dssp             CCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETT-----------
T ss_pred             cceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecC-----------
Confidence            246677777777799999999999999999999999999999999999999999999999999875321           


Q ss_pred             ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCchhhHh
Q 024439          147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSP---HIPTRDSKLTRL  223 (267)
Q Consensus       147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~---~ipyr~SkLT~l  223 (267)
                                .+....|+|+||||||||+..+++..+.+++|+..||+||.+|++||.+|++++.   |||||+||||+|
T Consensus       288 ----------~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~L  357 (403)
T 4etp_A          288 ----------TGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYL  357 (403)
T ss_dssp             ----------TCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHH
T ss_pred             ----------CCCeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHH
Confidence                      1134679999999999999999999999999999999999999999999987654   999999999999


Q ss_pred             hHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       224 L~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      |||+|||||+|+||+||+|+..+++||++||+||+|++.+..
T Consensus       358 LqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~  399 (403)
T 4etp_A          358 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL  399 (403)
T ss_dssp             TGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC--
T ss_pred             HHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhccc
Confidence            999999999999999999999999999999999999998764

>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*

Probab=100.00  E-value=2.5e-67  Score=462.25  Aligned_cols=230  Identities=33%  Similarity=0.492  Sum_probs=184.7

Q ss_pred             CcccCCccCccccccccCC--CCCCCcChHHHHHHHHHHhcccC------CCeEEEEEEEEecCceeecCCCCCCCcCcc
Q 024439            1 MAYGQTGTGKTYTLGRLGK--DDASERGIMVRALEDIISSMSVT------SDSVEVSYLQLYMESIQDLLAPEKVNIPIN   72 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~--~~~~~~Gli~r~~~~lf~~~~~~------~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~   72 (267)
                      ||||||||||||||+|...  ..++++|||||++++||+.+...      .+.|++||+|||||+++|||++......+ 
T Consensus        99 fAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~-  177 (344)
T 3dc4_A           99 LAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMV-  177 (344)
T ss_dssp             EEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBCC-
T ss_pred             EEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCccc-
Confidence            7999999999999977432  23577899999999999987532      36899999999999999999985432111 


Q ss_pred             cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439           73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP  152 (267)
Q Consensus        73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~  152 (267)
                            .....++++++|.+++|++.+|+.|.++|..+++.+|..|||||+||+|+|.+.                    
T Consensus       178 ------~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~--------------------  231 (344)
T 3dc4_A          178 ------AARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK--------------------  231 (344)
T ss_dssp             ------SSTTTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS--------------------
T ss_pred             ------cccccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec--------------------
Confidence                  134568999999999999999999999999999999999999999999999642                    


Q ss_pred             CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCC
Q 024439          153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSA  232 (267)
Q Consensus       153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~  232 (267)
                             ...|+|+||||||||+..+++..+.+.+|+..||+||.+|++||.+|++++.|||||+||||+||||+||||+
T Consensus       232 -------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGns  304 (344)
T 3dc4_A          232 -------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQS  304 (344)
T ss_dssp             -------SCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTC
T ss_pred             -------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCccccHHHHHHHHHhCCCC
Confidence                   1468999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          233 RTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       233 ~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      +|+||+||+|+..+++||++||+||+|+++..
T Consensus       305 kt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~  336 (344)
T 3dc4_A          305 YLTFLACISPHQCDLSETLSTLRFGTSAKAAA  336 (344)
T ss_dssp             EEEEEEEECCCGGGHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEeCCchhhHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999864

>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*

Probab=100.00  E-value=1.7e-66  Score=466.60  Aligned_cols=234  Identities=33%  Similarity=0.468  Sum_probs=198.7

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCcc--c
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPIN--E   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~--~   73 (267)
                      ||||||||||||||+|    .++++|||||++++||..+..     ..+.|.+||+|||||+|+|||++...++.++  +
T Consensus       143 fAYGqTGSGKTyTM~G----~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~  218 (412)
T 3u06_A          143 FAYGQTGSGKTYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAK  218 (412)
T ss_dssp             EEESSTTSSHHHHHTE----ETTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECS
T ss_pred             EEecCCCCCCeeEecC----CCCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeee
Confidence            7999999999999966    345789999999999998753     3568999999999999999999877766665  4


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. +.+++.|++++.|.+++|+..+|..|..+|..++|.+|..|||||+||+|+|.+....                  
T Consensus       219 ~~~-~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~------------------  279 (412)
T 3u06_A          219 NNK-NDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAE------------------  279 (412)
T ss_dssp             SCT-TSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETT------------------
T ss_pred             cCC-CCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCC------------------
Confidence            554 4599999999999999999999999999999999999999999999999999875322                  


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         ......|+|+||||||||+..    .+.+++|+..||+||.+|++||.+|++++.|||||+||||+||||+||||++
T Consensus       280 ---~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnsk  352 (412)
T 3u06_A          280 ---KQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK  352 (412)
T ss_dssp             ---TTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCE
T ss_pred             ---CCCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCce
Confidence               123567999999999999864    3568899999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      |+||+||+|...+++||++||+||+|++.|.
T Consensus       353 t~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~  383 (412)
T 3u06_A          353 TLMFINVSPFQDCFQESVKSLRFAASVNSCK  383 (412)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEeCCChhhHHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999886

>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}

Probab=100.00  E-value=1.3e-64  Score=487.45  Aligned_cols=237  Identities=32%  Similarity=0.545  Sum_probs=196.0

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCC---CCCcCcc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPE---KVNIPIN   72 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~---~~~~~i~   72 (267)
                      ||||||||||||||+|      +++|||||++++||+.+...     .+.|++||+|||||+|+|||+|.   ...+.++
T Consensus       467 ~ayGqtgsGKT~Tm~g------~~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~  540 (715)
T 4h1g_A          467 FAYGQTGSGKTFTMSH------PTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIK  540 (715)
T ss_dssp             EEESSTTSSHHHHHHC------TTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEE
T ss_pred             EccCCCCCchhhccCC------CCCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeE
Confidence            7999999999999965      25799999999999987542     35799999999999999999975   3456778


Q ss_pred             cCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCC
Q 024439           73 EDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELP  152 (267)
Q Consensus        73 ~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~  152 (267)
                      +++..|.+++.|++++.|.|++|++.+|..|.++|+.++|.+|..|||||+||+|+|.+....                 
T Consensus       541 ~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~-----------------  603 (715)
T 4h1g_A          541 HDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSL-----------------  603 (715)
T ss_dssp             EETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETT-----------------
T ss_pred             EecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecC-----------------
Confidence            877788899999999999999999999999999999999999999999999999999875321                 


Q ss_pred             CCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCC
Q 024439          153 GDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGS  231 (267)
Q Consensus       153 ~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~  231 (267)
                          ......|+|+|||||||||..+++..+.+++|+..||+||.+|++||.+|+.+ ..|||||+||||+||||+||||
T Consensus       604 ----~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn  679 (715)
T 4h1g_A          604 ----TKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGN  679 (715)
T ss_dssp             ----TCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTT
T ss_pred             ----CCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCC
Confidence                12346799999999999999999999999999999999999999999999854 5799999999999999999999


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhh
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIRI  264 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~  264 (267)
                      |+|+||+||||...+++||++||+||+|+++|+
T Consensus       680 ~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~  712 (715)
T 4h1g_A          680 SKTLMFVNISPLTKDLNETINSLRFATKVNNTR  712 (715)
T ss_dssp             CEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred             ceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence            999999999999999999999999999999994

>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9

Probab=99.94  E-value=6e-28  Score=173.47  Aligned_cols=76  Identities=53%  Similarity=0.761  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHHHHHhcC-CCCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          191 FINLSLSSLGKCINALAEN-SPHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       191 ~in~sl~~L~~vi~~l~~~-~~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      .||+||.+|++||.+|+++ ..||||||||||++|+|+|||+++|+||+||+|...+++||++||+||+|+++|.|.
T Consensus         3 ~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~   79 (100)
T 2kin_B            3 NINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNT   79 (100)
T ss_dssp             BSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred             cchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCc
Confidence            4899999999999999987 579999999999999999999999999999999999999999999999999999874

>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9

Probab=99.92  E-value=4.1e-26  Score=169.57  Aligned_cols=74  Identities=54%  Similarity=0.813  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          193 NLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       193 n~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||.+|++||.+|++++ .|||||+||||++|+|+|||+++|+||+||+|...+++||++||+||+|+++|.|.
T Consensus         1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~   75 (117)
T 3kin_B            1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNT   75 (117)
T ss_dssp             CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCC
Confidence            689999999999999874 69999999999999999999999999999999999999999999999999999884

>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}

Probab=99.32  E-value=3.3e-12  Score=106.98  Aligned_cols=188  Identities=12%  Similarity=0.155  Sum_probs=120.6

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc---CCCeEEEEEEEEe-cCceeecCCCC--CCCcCcccC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV---TSDSVEVSYLQLY-MESIQDLLAPE--KVNIPINED   74 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~---~~~~v~~S~~EIy-~e~v~DLL~~~--~~~~~i~~~   74 (267)
                      |||||||||||                 ||++..+|.....   +.+.+.+||+||| ||.++|||...  +....++.+
T Consensus        97 fSyGQTGsGKT-----------------~ral~q~f~~~~~~~~~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~  159 (298)
T 2o0a_A           97 ISLSTTPHGSL-----------------RESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLK  159 (298)
T ss_dssp             EEECSSCCHHH-----------------HHHHHHHHHSTTSHHHHHEEEEEEEEEEECC-CEEETTSCCC------CEEE
T ss_pred             EEECCCCCCcc-----------------HHHHHHHHHHhhhhcccceEEEEEEEEEecCCchHHhcCCCCCCCcceEEec
Confidence            69999999999                 9999999999866   7889999999999 99999999632  224566655


Q ss_pred             CCCCCccCCCCeEEEeCC-HHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           75 PKTGEVSLPGATVVKLRD-LDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        75 ~~~g~~~i~~l~~~~v~s-~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      . +|...+.|++.++|.+ ++|+..++.-+..-      ..   ..+.-.|+.+.+........                
T Consensus       160 ~-~g~~iv~~s~~i~V~~~~edv~~~~~~~~~~------~~---~~~gi~i~k~~~~~~~~~~~----------------  213 (298)
T 2o0a_A          160 F-EKHSISLDSKLVIIENGLEDLPLNFSCDEHP------NL---PHSGMGIIKVQFFPRDSKSD----------------  213 (298)
T ss_dssp             E-CSSCEEEESCCEEESSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------------------
T ss_pred             C-CCCEEecccEEEEccccHHHHHHHhhccccc------cc---CCCCceEEEEEEecCccccc----------------
Confidence            3 4668899999999999 89988777221111      01   11345666666644211100                


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                      ++.  ...---++|+.+....                    ++..|.+   ++..+    .+-.|+++-+|+-.|.- .+
T Consensus       214 ~~~--~~~~~d~yf~e~~~~~--------------------~~~~l~~---~~~~~----~~~~spi~~il~~ll~~-tk  263 (298)
T 2o0a_A          214 GNN--DPVPVDFYFIELNNLK--------------------SIEQFDK---SIFKK----ESCETPIALVLKKLISD-TK  263 (298)
T ss_dssp             ------CCCEEEEEEEECSHH--------------------HHHHHHH---HHHTC-----CCCSHHHHHHHHHHHH-SB
T ss_pred             ccC--CCCceEEEEEEeCCHH--------------------HHHHHHh---hcccc----cccCCcHHHHHHHHHhc-Cc
Confidence            000  0112357888875421                    2333433   22222    45678999999988865 67


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRIS  265 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~  265 (267)
                      -++++++.-...    --.-|..++++.++.|
T Consensus       264 s~~~~~l~~~~~----~~~lL~~s~~i~~~~~  291 (298)
T 2o0a_A          264 SFFLLNLNDSKN----VNKLLTISEEVQTQLC  291 (298)
T ss_dssp             CEEEEEECCGGG----HHHHHHHHHHHHHHTC
T ss_pred             ceEEEEecCCCc----hhHHHHHHHHhhcccC
Confidence            789999975322    2336888888888765

>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}

Probab=84.52  E-value=0.22  Score=37.58  Aligned_cols=12  Identities=42%  Similarity=0.869  Sum_probs=11.5

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      ||++|+|||+.+
T Consensus        42 ~G~~G~GKTtL~   53 (149)
T 2kjq_A           42 WGEEGAGKSHLL   53 (149)
T ss_dssp             ESSSTTTTCHHH
T ss_pred             ECCCCCCHHHHH
Confidence            799999999998

>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*

Probab=84.43  E-value=0.19  Score=38.78  Aligned_cols=12  Identities=42%  Similarity=0.556  Sum_probs=11.5

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      ||++|+|||+.+
T Consensus        44 ~G~~G~GKTtL~   55 (180)
T 3ec2_A           44 VGSPGVGKTHLA   55 (180)
T ss_dssp             CCSSSSSHHHHH
T ss_pred             ECCCCCCHHHHH
Confidence            799999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	267
d2zfia1	349	c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus),	1e-50
d1bg2a_	323	c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId	3e-50
d1x88a1	345	c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens),	5e-48
d1ry6a_	330	c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu	2e-47
d1goja_	354	c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5	8e-47
d1f9va_	342	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	1e-43
d1v8ka_	362	c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c	2e-43
d2ncda_	368	c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun	6e-40
d1sdma_	364	c.37.1.9 (A:) Kinesin heavy chain-like protein {Po	6e-35

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

 Score =  167 bits (423), Expect = 1e-50
 Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 38/277 (13%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYM 55
            AYGQTG GK+YT+  +GK +  ++GI+ +  ED+ S ++ T     S SVEVSY+++Y 
Sbjct: 91  FAYGQTGAGKSYTM--MGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYC 148

Query: 56  ESIQDLLAPEKV-NIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
           E ++DLL P+   N+ + E P  G   +   + + +   + +  L+  G   R  A T +
Sbjct: 149 ERVRDLLNPKNKGNLRVREHPLLGPY-VEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNM 207

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +   +  H+                  + ++   + SK+ +VDLAGSE
Sbjct: 208 NETSSRSHAVFNIIFTQKRHDA-----------------ETNITTEKVSKISLVDLAGSE 250

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------------SPHIPTRDSKLTR 222
           R D +G++G  L+E   IN SL++LGK I+ALAE             +  IP RDS LT 
Sbjct: 251 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW 310

Query: 223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           LLR++ GG++RT+++  + P+  N+ ET ST+ +  R
Sbjct: 311 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 347

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 3e-50
 Identities = 102/264 (38%), Positives = 154/264 (58%), Gaps = 29/264 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASE-RGIMVRALED----IISSMSVTSDSVEVSYLQLYM 55
            AYGQT +GKT+T+   GK    E  GI+ R ++D    I S        ++VSY ++Y+
Sbjct: 80  FAYGQTSSGKTHTM--EGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYL 137

Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLN 115
           + I+DLL   K N+ ++ED       + G T   +   D ++  +  G+ NRH A T +N
Sbjct: 138 DKIRDLLDVSKTNLSVHEDKNR-VPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMN 196

Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
             SSRSH+I ++ +++                      +         KL +VDLAGSE+
Sbjct: 197 EHSSRSHSIFLINVKQE---------------------NTQTEQKLSGKLYLVDLAGSEK 235

Query: 176 IDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTS 235
           + K+G+EG +L+EAK IN SLS+LG  I+ALAE S ++P RDSK+TR+L+DS GG+ RT+
Sbjct: 236 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTT 295

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           ++I   PS+ N +ET ST++FGQR
Sbjct: 296 IVICCSPSSYNESETKSTLLFGQR 319

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

 Score =  160 bits (405), Expect = 5e-48
 Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 33/273 (12%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDAS-------ERGIMVRALEDIISSMSVTSD--SVEVSYL 51
            AYGQTGTGKT+T+      +           GI+ R L  I   ++      SV+VS L
Sbjct: 85  FAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLL 144

Query: 52  QLYMESIQDLLAP-----EKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVN 106
           ++Y E + DLL P     E++ +  +   K G V + G   + + + D + Q+L+ G   
Sbjct: 145 EIYNEELFDLLNPSSDVSERLQMFDDPRNKRG-VIIKGLEEITVHNKDEVYQILEKGAAK 203

Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A T +N  SSRSH++  V I      I                  +   LV+  KL 
Sbjct: 204 RTTAATLMNAYSSRSHSVFSVTIHMKETTI------------------DGEELVKIGKLN 245

Query: 167 IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRD 226
           +VDLAGSE I +SG+      EA  IN SL +LG+ I AL E +PH+P R+SKLTR+L+D
Sbjct: 246 LVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQD 305

Query: 227 SFGGSARTSLIITVGPSARNHAETTSTIMFGQR 259
           S GG  RTS+I T+ P++ N  ET ST+ +  R
Sbjct: 306 SLGGRTRTSIIATISPASLNLEETLSTLEYAHR 338

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  158 bits (400), Expect = 2e-47
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 32/265 (12%)

Query: 1   MAYGQTGTGKTYTLGRLGKD-DASERGIMVRALEDI----ISSMSVTSDSVEVSYLQLYM 55
            AYGQTG+GKTYT+        +   GI   A  DI           +  + +S+ ++Y 
Sbjct: 89  FAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYC 148

Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLN 115
             + DLL   +  +   E+ K   V      ++++   + L+  +  G + R       N
Sbjct: 149 GKLYDLLQK-RKMVAALENGKKEVVV-KDLKILRVLTKEELILKMIDGVLLRKIGVNSQN 206

Query: 116 TESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSER 175
            ESSRSHAIL + ++                                 K+  +DLAGSER
Sbjct: 207 DESSRSHAILNIDLKDINKNT------------------------SLGKIAFIDLAGSER 242

Query: 176 IDKSGSEG-PLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
              + S+      +   IN SL +L +CI A+  +  HIP RDS+LT++LRD F G +++
Sbjct: 243 GADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKS 302

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            +I  + P+     +T +T+ +  R
Sbjct: 303 IMIANISPTISCCEQTLNTLRYSSR 327

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score =  157 bits (398), Expect = 8e-47
 Identities = 108/264 (40%), Positives = 158/264 (59%), Gaps = 27/264 (10%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSD----SVEVSYLQLYME 56
            AYGQTG GK+YT+     DD   RG++ R +E I +S+  ++     +V VSY+++YME
Sbjct: 84  FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYME 143

Query: 57  SIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNT 116
            I+DLLAP+  N+P++E+   G V + G   + +  +  + ++++ G   R  A T +N 
Sbjct: 144 RIRDLLAPQNDNLPVHEEKNRG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQ 202

Query: 117 ESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSERI 176
           ESSRSH+I V+ I +   E                         +  +L +VDLAGSE++
Sbjct: 203 ESSRSHSIFVITITQKNVETGS---------------------AKSGQLFLVDLAGSEKV 241

Query: 177 DKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTS 235
            K+G+ G  LEEAK IN SLS+LG  INAL +    H+P RDSKLTR+L++S GG++RT+
Sbjct: 242 GKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT 301

Query: 236 LIITVGPSARNHAETTSTIMFGQR 259
           LII   PS+ N AET ST+ FG R
Sbjct: 302 LIINCSPSSYNDAETLSTLRFGMR 325

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

 Score =  148 bits (375), Expect = 1e-43
 Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 45/284 (15%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKT+T+           GI+   +  I + ++          V   ++++Y 
Sbjct: 87  FAYGQTGSGKTFTMLN------PGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYN 140

Query: 56  ESIQDLLAPE---------KVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVN 106
           E+I DLL  +          +   I  D +T   ++   T  KL   + +  +L+     
Sbjct: 141 ENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKL 200

Query: 107 RHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLL 166
           R  A+T  N  SS SH+I ++++  S  +                             L 
Sbjct: 201 RSTASTASNEHSSASHSIFIIHLSGSNAKTGAH---------------------SYGTLN 239

Query: 167 IVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS---PHIPTRDSKLTRL 223
           +VDLAGSERI+ S   G  L E + IN SLS LG  I+AL +      HIP R+SKLT L
Sbjct: 240 LVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYL 299

Query: 224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISVV 267
           L+ S  G ++T + + + PS+ +  ET +++ F  + +    +V
Sbjct: 300 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVN-STRLV 342

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

 Score =  148 bits (375), Expect = 2e-43
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 37/268 (13%)

Query: 1   MAYGQTGTGKTYTLGRL--GKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQL 53
            AYGQTG+GKT+T+G    GK   + +GI   A  D+    +       +  V V++ ++
Sbjct: 118 FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEI 177

Query: 54  YMESIQDLLAPEKVNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           Y   + DLL  +     + +     +V + G     +   D +++++ +G   R +  T 
Sbjct: 178 YNGKVFDLLNKKAKLRVLEDSR--QQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTF 235

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
            N+ SSRSHA   + +R                                 K  +VDLAG+
Sbjct: 236 ANSNSSRSHACFQILLRTKGRLHG--------------------------KFSLVDLAGN 269

Query: 174 ERIDKSGSEGP-LLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSF-GGS 231
           ER   + S       E   IN SL +L +CI AL +N  H P R+SKLT++LRDSF G +
Sbjct: 270 ERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN 329

Query: 232 ARTSLIITVGPSARNHAETTSTIMFGQR 259
           +RT +I  + P   +   T +T+ +  R
Sbjct: 330 SRTCMIAMISPGISSCEYTLNTLRYADR 357

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  140 bits (352), Expect = 6e-40
 Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 35/265 (13%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDS-----VEVSYLQLYM 55
            AYGQTG+GKTYT+           G++ R ++ +  S+    +      ++ ++L++Y 
Sbjct: 129 FAYGQTGSGKTYTMD----GVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYN 184

Query: 56  ESIQDLLAPEKVNIPINEDPKTGEVSL-PGATVVKLRDLDHLLQLLQVGEVNRHAANTKL 114
           E + DLL+ E+ ++ I               T   + D +HL  L+   ++NR  A+T  
Sbjct: 185 EVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAG 244

Query: 115 NTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGSE 174
           N  SSRSHA+  +           ++     + +           +    + +VDLA   
Sbjct: 245 NERSSRSHAVTKL-----------ELIGRHAEKQE----------ISVGSINLVDLA--- 280

Query: 175 RIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART 234
              +S      + E K IN SLS L   I AL +   HIP R+SKLT LL  S GG+++T
Sbjct: 281 -GSESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKT 339

Query: 235 SLIITVGPSARNHAETTSTIMFGQR 259
            + I V P      E+  ++ F   
Sbjct: 340 LMFINVSPFQDCFQESVKSLRFAAS 364

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score =  126 bits (317), Expect = 6e-35
 Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 33/266 (12%)

Query: 1   MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYME 56
            AYGQTG+GKT+T         S  G+  RA+ ++   M       S S++   ++LY +
Sbjct: 79  FAYGQTGSGKTFT----IYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQD 134

Query: 57  SIQDLLAPEK---VNIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTK 113
           ++ DLL P++   + + I +D K         TVV +   + L  ++Q G   RH   T 
Sbjct: 135 TLVDLLLPKQAKRLKLDIKKDSKGMVSV-ENVTVVSISTYEELKTIIQRGSEQRHTTGTL 193

Query: 114 LNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNHVPLVRKSKLLIVDLAGS 173
           +N +SSRSH I+ V I  +  +                        + + KL  VDLAGS
Sbjct: 194 MNEQSSRSHLIVSVIIESTNLQTQA---------------------IARGKLSFVDLAGS 232

Query: 174 ERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR 233
           ER+ KSGS G  L+EA+ IN SLS+LG  I+AL+  + HIP R+ KLT L+ DS GG+A+
Sbjct: 233 ERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK 292

Query: 234 TSLIITVGPSARNHAETTSTIMFGQR 259
           T + + + P+  N  ET +++ +  R
Sbjct: 293 TLMFVNISPAESNLDETHNSLTYASR 318

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	267
d1goja_	354	Kinesin {Neurospora crassa [TaxId: 5141]}	100.0
d1sdma_	364	Kinesin heavy chain-like protein {Potato (Solanum	100.0
d1x88a1	345	Kinesin {Human (Homo sapiens), mitotic kinesin eg5	100.0
d1ry6a_	330	Kinesin {Malaria parasite (Plasmodium falciparum)	100.0
d1v8ka_	362	Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090	100.0
d2zfia1	349	Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090	100.0
d1bg2a_	323	Kinesin {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1f9va_	342	Kinesin motor Ncd (non-claret disjunctional) {Bake	100.0
d2ncda_	368	Kinesin motor Ncd (non-claret disjunctional) {Frui	100.0
d1w5sa2	287	CDC6-like protein APE0152, N-terminal domain {Aero	88.71
d1l8qa2	213	Chromosomal replication initiation factor DnaA {Aq	86.78
d1p9ra_	401	Extracellular secretion NTPase EpsE {Vibrio choler	83.11
d1okkd2	207	GTPase domain of the signal recognition particle r	82.35
d1gvnb_	273	Plasmid maintenance system epsilon/zeta, toxin zet	82.25
d1uaaa1	306	DEXX box DNA helicase {Escherichia coli, RepD [Tax	81.97
d1pjra1	318	DEXX box DNA helicase {Bacillus stearothermophilus	81.5
d1j8yf2	211	GTPase domain of the signal sequence recognition p	81.06
d1fnna2	276	CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T	80.6

>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

Probab=100.00  E-value=2.1e-64  Score=447.26  Aligned_cols=244  Identities=44%  Similarity=0.700  Sum_probs=226.3

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||+|||||||||+|....+++.+|||||++++||..+...    .+.|++||+|||+|+++|||+|....+.+++++.
T Consensus        84 ~aYG~tgSGKT~Tm~G~~~~~~~~~Giipr~l~~l~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~l~~~e~~~  163 (354)
T d1goja_          84 FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKN  163 (354)
T ss_dssp             EEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETT
T ss_pred             EecccCCCCcceeeecccccCcccceecchhHHHHhhhhcccccCceEEEEeehhheecceEeecccccccceeeeeecC
Confidence            699999999999999977777888999999999999987554    3489999999999999999999999999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      .| +++.++++++|.+++|+..++..|..+|..+.+..|..|||||+||+|+|.+....                     
T Consensus       164 ~~-~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~---------------------  221 (354)
T d1goja_         164 RG-VYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE---------------------  221 (354)
T ss_dssp             TE-EEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT---------------------
T ss_pred             CC-EeecCceeecchhHHHHHHHHhhcccccccccccccccccccceEEEEEEEEeecC---------------------
Confidence            55 99999999999999999999999999999999999999999999999999876332                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCchhhHhhHHhcCCCCeEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENS-PHIPTRDSKLTRLLRDSFGGSARTS  235 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~ipyr~SkLT~lL~~~l~g~~~~~  235 (267)
                      .+....++|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|++++ .|+|||+||||++|+|+|||+|+|+
T Consensus       222 ~~~~~~s~l~~vDLAGsE~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~SkLT~lLkd~Lgg~s~t~  301 (354)
T d1goja_         222 TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTT  301 (354)
T ss_dssp             TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEE
T ss_pred             CCCeEEEEEEEeeccCcccccccCCccchhhhhhhhhHHHHHHHHHHHHHhcCCCCcCCcccCHHHHHHHHhcCCCCeEE
Confidence            123578999999999999999999999999999999999999999999999864 6999999999999999999999999


Q ss_pred             EEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          236 LIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       236 ~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      ||+||+|...+++||++||+||+|+++|+|.
T Consensus       302 ~I~~isp~~~~~~eTl~TL~fa~~~~~i~~~  332 (354)
T d1goja_         302 LIINCSPSSYNDAETLSTLRFGMRAKSIKNK  332 (354)
T ss_dssp             EEEEECCBGGGHHHHHHHHHHHHHHHTCBCC
T ss_pred             EEEEECCCcccHHHHHHHHHHHHHHhccCcc
Confidence            9999999999999999999999999999885

>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=100.00  E-value=1.5e-64  Score=449.29  Aligned_cols=240  Identities=39%  Similarity=0.596  Sum_probs=211.4

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCC---CcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKV---NIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~---~~~i~~   73 (267)
                      ||||||||||||||+|    +..++|||||++++||..+...    .+.|.+||+|||+|+++|||+|...   .+.+++
T Consensus        79 ~aYGqTGSGKTyTm~G----~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~  154 (364)
T d1sdma_          79 FAYGQTGSGKTFTIYG----ADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKK  154 (364)
T ss_dssp             EEECSTTSSHHHHHTB----CSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEE
T ss_pred             eccccCCCCccccccc----CccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccccceee
Confidence            6999999999999965    4567999999999999987553    3589999999999999999987543   467788


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|+++++|.+++|+..+|..|..+|....+..|..|||||+||++++.+....                  
T Consensus       155 ~~~~~-~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~------------------  215 (364)
T d1sdma_         155 DSKGM-VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ------------------  215 (364)
T ss_dssp             CTTSC-EEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETT------------------
T ss_pred             cccCc-cccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccC------------------
Confidence            87755 88999999999999999999999999999999999999999999999999875332                  


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         ......++|+||||||+|+..+.+..+.+.+|+..||+||.+|++||.+|++++.|+|||+||||++|+|+|||+|+
T Consensus       216 ---~~~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~  292 (364)
T d1sdma_         216 ---TQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK  292 (364)
T ss_dssp             ---TCCEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSE
T ss_pred             ---cceeeeEEEEeechhhccccccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCce
Confidence               12457899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+||+||+|...+++||++||+||+||++|+|.
T Consensus       293 t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~  325 (364)
T d1sdma_         293 TLMFVNISPAESNLDETHNSLTYASRVRSIVND  325 (364)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCC
T ss_pred             EEEEEEeCCCcchHHHHHHHHHHHHHHhhcccC
Confidence            999999999999999999999999999999885

>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]

Probab=100.00  E-value=1.2e-64  Score=447.49  Aligned_cols=247  Identities=40%  Similarity=0.562  Sum_probs=203.6

Q ss_pred             CcccCCccCccccccccCCCC-------CCCcChHHHHHHHHHHhcccCC--CeEEEEEEEEecCceeecCCCCCCC---
Q 024439            1 MAYGQTGTGKTYTLGRLGKDD-------ASERGIMVRALEDIISSMSVTS--DSVEVSYLQLYMESIQDLLAPEKVN---   68 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~-------~~~~Gli~r~~~~lf~~~~~~~--~~v~~S~~EIy~e~v~DLL~~~~~~---   68 (267)
                      ||||||||||||||+|...+.       ...+|||||++++||+.+....  +.|.+||+|||+|+++|||++....   
T Consensus        85 ~aYGqtgSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~v~vS~~EIy~e~v~DLL~~~~~~~~~  164 (345)
T d1x88a1          85 FAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSER  164 (345)
T ss_dssp             EEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTSCTTCC
T ss_pred             EeeeeccccceEEeeecCCcccccccccCccCCcHHHHHHHHHHhhhccCceEEEEEEEEEEECCeeEECCCCCCccccc
Confidence            699999999999998864321       2347999999999999987764  4899999999999999999975321   


Q ss_pred             --cCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439           69 --IPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD  146 (267)
Q Consensus        69 --~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~  146 (267)
                        ....++.. +.++++|+++++|.|++|++.+|..|.++|....+..|..|||||+||+|+|.+.....          
T Consensus       165 ~~~~~~~~~~-~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SsRsH~i~~i~i~~~~~~~----------  233 (345)
T d1x88a1         165 LQMFDDPRNK-RGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTI----------  233 (345)
T ss_dssp             BEEEEETTEE-EEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECT----------
T ss_pred             ceeeecccCC-CCEEEcCCEEEEeCCHHHHHHHHHhhhccccccccCccccccccceEEEEEEEEeeccC----------
Confidence              22233333 34889999999999999999999999999999999999999999999999998764321          


Q ss_pred             ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHH
Q 024439          147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRD  226 (267)
Q Consensus       147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~  226 (267)
                              ........|+|+||||||+|+..+....+.+..|...||+||.+|++||.+|++++.|||||+||||+||+|
T Consensus       234 --------~~~~~~~~s~l~~vDLAGsEr~~~~~~~~~~~~e~~~in~Sl~~L~~vi~al~~~~~~iPyR~SkLT~lL~d  305 (345)
T d1x88a1         234 --------DGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQD  305 (345)
T ss_dssp             --------TSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGG
T ss_pred             --------CCCCceEeeeEEEEecCCccccccccchhhhhcccccccchHHHHHHHHHHHhcCCCcCCCccCHHHHHhHH
Confidence                    112345789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          227 SFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       227 ~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      +|||+|+|+||+||+|...+++||++||+||+||++|+|.
T Consensus       306 ~Lgg~s~t~~i~~vsp~~~~~~eTl~tL~fa~~~~~I~nk  345 (345)
T d1x88a1         306 SLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNK  345 (345)
T ss_dssp             GSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCC
T ss_pred             hcCCCCcEEEEEEeCCchhhHHHHHHHHHHHHHhhhccCC
Confidence            9999999999999999999999999999999999999983

>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-63  Score=436.14  Aligned_cols=236  Identities=31%  Similarity=0.458  Sum_probs=204.6

Q ss_pred             CcccCCccCccccccccC-CCCCCCcChHHHHHHHHHHhccc----CCCeEEEEEEEEecCceeecCCCCCCCcCcccCC
Q 024439            1 MAYGQTGTGKTYTLGRLG-KDDASERGIMVRALEDIISSMSV----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINEDP   75 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~-~~~~~~~Gli~r~~~~lf~~~~~----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~   75 (267)
                      ||||||||||||||+|.+ .++.+++||+||++++||+.+..    ..+.|.+||+|||||+++|||++.+ .+.+++++
T Consensus        89 ~aYGqTGSGKTyTm~G~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~-~~~~~~~~  167 (330)
T d1ry6a_          89 FAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK-MVAALENG  167 (330)
T ss_dssp             EEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC-----------
T ss_pred             EeeeccccccceeeecccccccccCCCchhHHHhhhhhhhhhhcccceEEEEEEEEeeecccccccccccc-cceeeecC
Confidence            699999999999998864 34556899999999999987643    3458999999999999999999754 45677777


Q ss_pred             CCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCC
Q 024439           76 KTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDN  155 (267)
Q Consensus        76 ~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (267)
                      ..| ++++|+++++|.+.+|+..++..|..+|..+.+..|..|||||+||+|++.+...                     
T Consensus       168 ~~~-~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~---------------------  225 (330)
T d1ry6a_         168 KKE-VVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINK---------------------  225 (330)
T ss_dssp             -CC-BCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTT---------------------
T ss_pred             CCC-ccccCceEEEEeeccchhhhhhcccccccccccccccccCCcceEEEEEEEeccc---------------------
Confidence            644 8999999999999999999999999999999999999999999999999976422                     


Q ss_pred             CCCceeeeeEEEEECCCCccccccCCCchh-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeE
Q 024439          156 HVPLVRKSKLLIVDLAGSERIDKSGSEGPL-LEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSART  234 (267)
Q Consensus       156 ~~~~~~~s~l~fvDLagse~~~~~~~~~~~-~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~  234 (267)
                         ....|+|+||||||+|+..+....+.. ..|+..||+||.+|++||.+|++++.|||||+||||++|+|+|||+|+|
T Consensus       226 ---~~~~s~l~~vDLAGsEr~~~~~~~~~~~~~e~~~IN~sL~~L~~vi~al~~~~~~iPyR~SkLT~lL~d~lggns~t  302 (330)
T d1ry6a_         226 ---NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKS  302 (330)
T ss_dssp             ---TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEE
T ss_pred             ---ccccceeeeecccccccccccccCCchhhhhhhhhhHHHHHHHHHHHHHhcCCCcCCCccCHHHHHHHHhcCCCCeE
Confidence               235799999999999998887766655 4699999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCChHHHHHHhHHHHHhhh
Q 024439          235 SLIITVGPSARNHAETTSTIMFGQRGSI  262 (267)
Q Consensus       235 ~~I~~vsp~~~~~~eTl~TL~f~~r~~~  262 (267)
                      +||+||+|...+++||++||+||+|||.
T Consensus       303 ~~I~~vsp~~~~~~eTl~tL~fa~rak~  330 (330)
T d1ry6a_         303 IMIANISPTISCCEQTLNTLRYSSRVKN  330 (330)
T ss_dssp             EEEEEECCBGGGHHHHHHHHHHHHHHCC
T ss_pred             EEEEEECCchhhHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999973

>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif2c [TaxId: 10090]

Probab=100.00  E-value=1.6e-63  Score=442.14  Aligned_cols=235  Identities=32%  Similarity=0.465  Sum_probs=189.6

Q ss_pred             CcccCCccCccccccccCCC--CCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCcCccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKD--DASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNIPINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~--~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~   73 (267)
                      ||||||||||||||+|...+  ...++||+||++++||..+..     ..+.|++||+|||||+++|||++.. ...+++
T Consensus       118 faYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~-~~~~~~  196 (362)
T d1v8ka_         118 FAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKA-KLRVLE  196 (362)
T ss_dssp             EEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTTE-EEEEEE
T ss_pred             EeeccCCCCCceeeeecCCCCcccccCCeeeehhhhHHHHhhcccccccchhheeeeeeecCCeEEecccCCc-cccccc
Confidence            69999999999999886433  345789999999999987754     3579999999999999999999754 456777


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++..| +++.|++++.|.|++|+..++..|..+|....+..|..|||||+||+|++.+..                    
T Consensus       197 ~~~~~-~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~i~~i~i~~~~--------------------  255 (362)
T d1v8ka_         197 DSRQQ-VQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG--------------------  255 (362)
T ss_dssp             CSSCC-EEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS--------------------
T ss_pred             cccCC-cccCCCEEEEecCHHHHHHHHhccccccccccccCcccCcceeeEEEEEEEecc--------------------
Confidence            77655 889999999999999999999999999999999999999999999999996531                    


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCC-CchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHh-cCCC
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGS-EGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDS-FGGS  231 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~-~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~-l~g~  231 (267)
                            ...++|+||||||+|+..+... .+.+..|+..||+||.+|++||.+|++++.|||||+||||+||+|+ +|||
T Consensus       256 ------~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~lLkdsllGgn  329 (362)
T d1v8ka_         256 ------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGEN  329 (362)
T ss_dssp             ------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSS
T ss_pred             ------eeeeeEeeeecccccccccccccchhhhhhhhhhcccHHHHHHHHHHHhcCCCcCCCccCHHHHhhhhccCCCC
Confidence                  2468999999999999877644 4466789999999999999999999999999999999999999998 7999


Q ss_pred             CeEEEEEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          232 ARTSLIITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       232 ~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+|+||+||+|...+++||++||+||+||++|
T Consensus       330 s~t~~i~~vsp~~~~~~eTl~TL~fa~rak~I  361 (362)
T d1v8ka_         330 SRTCMIAMISPGISSCEYTLNTLRYADRVKEL  361 (362)
T ss_dssp             EEEEEEEEECCBGGGHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEEEEeCCChhhHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999987

>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Mouse (Mus musculus), kif1a [TaxId: 10090]

Probab=100.00  E-value=2.6e-63  Score=439.47  Aligned_cols=241  Identities=39%  Similarity=0.621  Sum_probs=208.1

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC-----CCeEEEEEEEEecCceeecCCCCC-CCcCcccC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT-----SDSVEVSYLQLYMESIQDLLAPEK-VNIPINED   74 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~-----~~~v~~S~~EIy~e~v~DLL~~~~-~~~~i~~~   74 (267)
                      ||||||||||||||+|.  ++..++|||||++++||+.+...     .+.|.+||+|||+|+++|||++.. ..+.++++
T Consensus        91 ~aYGqTgSGKT~Tm~G~--~~~~~~Glipr~l~~lf~~~~~~~~~~~~~~v~~S~~Eiyne~i~DLL~~~~~~~~~i~~~  168 (349)
T d2zfia1          91 FAYGQTGAGKSYTMMGK--QEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREH  168 (349)
T ss_dssp             EEECSTTSSHHHHHTBC--SGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEE
T ss_pred             eeeccCCCCCceeeccC--ccccccCchHHHHhhhhhhccccccCCcceEEEEEeeeeeCCEEEecccccccCCceEEec
Confidence            69999999999999874  34457899999999999987643     247999999999999999999854 56888888


Q ss_pred             CCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCC
Q 024439           75 PKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGD  154 (267)
Q Consensus        75 ~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~  154 (267)
                      +..| +++.|+++++|.+++|+..+|..|..+|....+..|..|||+|+||++++.+......                 
T Consensus       169 ~~~~-~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssrsh~i~~i~i~~~~~~~~-----------------  230 (349)
T d2zfia1         169 PLLG-PYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE-----------------  230 (349)
T ss_dssp             TTTE-EEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT-----------------
T ss_pred             CCCC-cEEEEeEEEeccCHHHHHHHHHhcccCeEeccCCCccccccccceEEEEEEEEecccC-----------------
Confidence            7644 8999999999999999999999999999999999999999999999999987644321                 


Q ss_pred             CCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC------------CCCCCCCCchhhH
Q 024439          155 NHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN------------SPHIPTRDSKLTR  222 (267)
Q Consensus       155 ~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~------------~~~ipyr~SkLT~  222 (267)
                      ........|+|+||||||+|+..+.+..+.+++|+..||+||.+|++||.+|++.            ..|||||+||||+
T Consensus       231 ~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~~~~~~~~~~~~IPyR~SkLT~  310 (349)
T d2zfia1         231 TNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTW  310 (349)
T ss_dssp             TTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHH
T ss_pred             CCcccceeeEEEEeecccchhhhhcCCcccchhhccchhhHHHHHHHHHHHHHhhhcccccccccCCCCccCCcCCHHHH
Confidence            1122346799999999999999999999999999999999999999999999853            2489999999999


Q ss_pred             hhHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhh
Q 024439          223 LLRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGS  261 (267)
Q Consensus       223 lL~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~  261 (267)
                      +|+|+|||+|+|+||+||+|...+++||++||+||+|||
T Consensus       311 lL~d~Lgg~s~t~~I~~vsp~~~~~~eTl~TL~fa~rak  349 (349)
T d2zfia1         311 LLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAK  349 (349)
T ss_dssp             HTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred             HHHHhcCCCccEEEEEEeCCChhhHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999986

>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-63  Score=437.80  Aligned_cols=240  Identities=41%  Similarity=0.643  Sum_probs=221.2

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccC----CCeEEEEEEEEecCceeecCCCCCCCcCcccCCC
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVT----SDSVEVSYLQLYMESIQDLLAPEKVNIPINEDPK   76 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~----~~~v~~S~~EIy~e~v~DLL~~~~~~~~i~~~~~   76 (267)
                      ||||||||||||||+|. ..++...||+||++.+||..+...    .+.|.+||+|||+|+++|||.+...++.+++++.
T Consensus        80 ~aYGqtgSGKTyT~~G~-~~~~~~~gii~r~l~~l~~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~~~~~~  158 (323)
T d1bg2a_          80 FAYGQTSSGKTHTMEGK-LHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKN  158 (323)
T ss_dssp             EEECSTTSSHHHHHTBS-TTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTT
T ss_pred             eeecccCCCCceeccCC-cccccccchhhhHHHHHHhhhhccccccceEEEEEEEEEEcCcccccccccccceeEeeccc
Confidence            69999999999999885 345567899999999999987543    3589999999999999999999999999999987


Q ss_pred             CCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCCCCC
Q 024439           77 TGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPGDNH  156 (267)
Q Consensus        77 ~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (267)
                      . .+++.|++++.|.+++|+..+++.|.++|....+..|..|||||+||++++.+....                     
T Consensus       159 ~-~~~v~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~~---------------------  216 (323)
T d1bg2a_         159 R-VPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQ---------------------  216 (323)
T ss_dssp             S-CEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETT---------------------
T ss_pred             c-ceeecCCEEEEEeccHhHhHHhhhcccceeecccCCCCCCCccceEEEEEEEEEeCC---------------------
Confidence            4 588999999999999999999999999999999999999999999999999876332                     


Q ss_pred             CCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCeEEE
Q 024439          157 VPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSARTSL  236 (267)
Q Consensus       157 ~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~~~~  236 (267)
                      ......|+|+||||||+|+..+.+..+.+..|+..||+||.+|++||.+|++++.+||||+||||++|+|+|+|+|+++|
T Consensus       217 ~~~~~~s~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~~~iPyR~SkLT~lL~d~L~g~~~t~~  296 (323)
T d1bg2a_         217 TEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTI  296 (323)
T ss_dssp             TCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEE
T ss_pred             CCcEEEEEEEEEecccccccccccchhhhhhhhhcccccHHHHHHHHHHHhcCCCccCCccCHHHHHHHHhcCCCccEEE
Confidence            12346899999999999999999989999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCChHHHHHHhHHHHHhhhh
Q 024439          237 IITVGPSARNHAETTSTIMFGQRGSIR  263 (267)
Q Consensus       237 I~~vsp~~~~~~eTl~TL~f~~r~~~i  263 (267)
                      |+||+|...+++||++||+||+|+++|
T Consensus       297 I~~isp~~~~~~eTl~tL~fa~r~k~I  323 (323)
T d1bg2a_         297 VICCSPSSYNESETKSTLLFGQRAKTI  323 (323)
T ss_dssp             EEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred             EEEECCcchhHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999986

>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]

Probab=100.00  E-value=7.4e-63  Score=435.41  Aligned_cols=239  Identities=33%  Similarity=0.463  Sum_probs=200.6

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCC--------
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKV--------   67 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~--------   67 (267)
                      ||||||||||||||+|.      ++|||||++++||+.+..     ..+.|.+||+|||+|+++|||++...        
T Consensus        87 ~aYGqtgSGKT~T~~G~------~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~~~~~~  160 (342)
T d1f9va_          87 FAYGQTGSGKTFTMLNP------GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIG  160 (342)
T ss_dssp             EEECCTTSSHHHHHHST------TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC------------
T ss_pred             eeeeccCCccccccccC------cCchhHHHHHHHHhhhhhhhccccccceeeeeeeeccCeeEECCCCCCCcccccccc
Confidence            69999999999999762      479999999999987753     24579999999999999999997543        


Q ss_pred             -CcCcccCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeecccccccccccc
Q 024439           68 -NIPINEDPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKD  146 (267)
Q Consensus        68 -~~~i~~~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~  146 (267)
                       ...++.++..+.+++.|+++++|.+++|+..+++.|.++|..+.+..|..|||||+||+|++.+....           
T Consensus       161 ~~~~~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~N~~ssrSh~i~~i~v~~~~~~-----------  229 (342)
T d1f9va_         161 LKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAK-----------  229 (342)
T ss_dssp             -CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC------------
T ss_pred             ceeeeeecCCCCcEEEeeeEEEEecchHHHHHHHhhhhhccccccccccccCcccceeEEEEEEEecCC-----------
Confidence             24455666666799999999999999999999999999999999999999999999999999875321           


Q ss_pred             ccccCCCCCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCchhhHh
Q 024439          147 TRTELPGDNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAEN---SPHIPTRDSKLTRL  223 (267)
Q Consensus       147 ~~~~~~~~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~---~~~ipyr~SkLT~l  223 (267)
                                .+....++|+||||||+|+..+....+.+.+|+..||+||.+|++||.+|+++   +.|||||+||||+|
T Consensus       230 ----------~~~~~~s~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~~~~iPyR~SkLT~l  299 (342)
T d1f9va_         230 ----------TGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYL  299 (342)
T ss_dssp             -----------CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHH
T ss_pred             ----------ccceeeeeeeeeeccCCcccccccchhhhhhhhhhccHHHHHHHHHHHHHhcccCCCCcCCCccCHHHHH
Confidence                      12356799999999999999999999999999999999999999999999974   35899999999999


Q ss_pred             hHHhcCCCCeEEEEEEeCCCCCChHHHHHHhHHHHHhhhhhcc
Q 024439          224 LRDSFGGSARTSLIITVGPSARNHAETTSTIMFGQRGSIRISV  266 (267)
Q Consensus       224 L~~~l~g~~~~~~I~~vsp~~~~~~eTl~TL~f~~r~~~i~~~  266 (267)
                      |+|+|+|+++|+||+||+|...+++||++||+||+||++|..|
T Consensus       300 L~d~lgg~s~t~~I~~vsp~~~~~~eTl~TL~fa~r~~~i~~~  342 (342)
T d1f9va_         300 LQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLV  342 (342)
T ss_dssp             HHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC
T ss_pred             HHHhcCCCceEEEEEEECCchhhHHHHHHHHHHHHHhhcceeC
Confidence            9999999999999999999999999999999999999999754

>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin motor Ncd (non-claret disjunctional)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.4e-60  Score=424.11  Aligned_cols=232  Identities=33%  Similarity=0.475  Sum_probs=200.5

Q ss_pred             CcccCCccCccccccccCCCCCCCcChHHHHHHHHHHhccc-----CCCeEEEEEEEEecCceeecCCCCCCCc--Cccc
Q 024439            1 MAYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSV-----TSDSVEVSYLQLYMESIQDLLAPEKVNI--PINE   73 (267)
Q Consensus         1 ~ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~-----~~~~v~~S~~EIy~e~v~DLL~~~~~~~--~i~~   73 (267)
                      ||||+|||||||||+|    +..++|||||++++||..+..     ..+.|.+||+|||+|+++|||+|...+.  .+.+
T Consensus       129 ~aYGqtGSGKT~Tm~G----~~~~~Giipr~~~~Lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~  204 (368)
T d2ncda_         129 FAYGQTGSGKTYTMDG----VPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAK  204 (368)
T ss_dssp             EEECSTTSSHHHHHTE----ETTEECHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECT
T ss_pred             EeeccCCCccceEecc----cccccchhhHHHHHHhhhhhhhccccccceEEEEEEEEecceeecccccccccccceeec
Confidence            6999999999999966    456789999999999987753     2357999999999999999999876554  4446


Q ss_pred             CCCCCCccCCCCeEEEeCCHHHHHHHHHHHhhccccccCCCcCCCCCccceEEEEEEeeeeccccccccccccccccCCC
Q 024439           74 DPKTGEVSLPGATVVKLRDLDHLLQLLQVGEVNRHAANTKLNTESSRSHAILVVYIRRSVHEIIDKITSEEKDTRTELPG  153 (267)
Q Consensus        74 ~~~~g~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~~~~~~~ssrsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~  153 (267)
                      ++. |.+++.|++++.|.+++++..++..|.++|....+..|..|||||+||+|++.+....                  
T Consensus       205 d~~-~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrSh~i~~i~v~~~~~~------------------  265 (368)
T d2ncda_         205 NNK-NDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAE------------------  265 (368)
T ss_dssp             TCT-TCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTCEEEEEEEEEEECTT------------------
T ss_pred             ccc-ccccccccceeccCCHHHHHHHHHHHHhhcccccccccccccccceEEEEEEEEEecC------------------
Confidence            665 5589999999999999999999999999999999999999999999999999875321                  


Q ss_pred             CCCCCceeeeeEEEEECCCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhhHhhHHhcCCCCe
Q 024439          154 DNHVPLVRKSKLLIVDLAGSERIDKSGSEGPLLEEAKFINLSLSSLGKCINALAENSPHIPTRDSKLTRLLRDSFGGSAR  233 (267)
Q Consensus       154 ~~~~~~~~~s~l~fvDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~ipyr~SkLT~lL~~~l~g~~~  233 (267)
                         .+....|+|+||||||+|+...    +.+..|+..||+||.+|++||.+|++++.|||||+||||++|+|+|||+|+
T Consensus       266 ---~~~~~~s~l~~VDLAGse~~~~----~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPyR~SkLT~lL~dsLggns~  338 (368)
T d2ncda_         266 ---KQEISVGSINLVDLAGSESPKT----STRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSK  338 (368)
T ss_dssp             ---SCCEEEEEEEEEECCCCCCC--------------CTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGSSSSCE
T ss_pred             ---CCceEeeeeeeeeeccccccch----hhhhcccccchhhHHHHHHHHHHHhcCCCCCCCcCCHHHHHHHHhcCCCCe
Confidence               2245789999999999997543    456789999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCChHHHHHHhHHHHHhhh
Q 024439          234 TSLIITVGPSARNHAETTSTIMFGQRGSI  262 (267)
Q Consensus       234 ~~~I~~vsp~~~~~~eTl~TL~f~~r~~~  262 (267)
                      |+||+||+|...+++||++||+||+||+.
T Consensus       339 t~mI~~isp~~~~~~eTl~TL~fa~rak~  367 (368)
T d2ncda_         339 TLMFINVSPFQDCFQESVKSLRFAASVNS  367 (368)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEECCChhhHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999986

>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CDC6-like protein APE0152, N-terminal domain
species: Aeropyrum pernix [TaxId: 56636]

Probab=88.71  E-value=0.11  Score=40.66  Aligned_cols=35  Identities=20%  Similarity=0.305  Sum_probs=22.8

Q ss_pred             cccCCccCccccccccCCCCCCCcChHHHHHHHHHHhcccCCCeEEEEE
Q 024439            2 AYGQTGTGKTYTLGRLGKDDASERGIMVRALEDIISSMSVTSDSVEVSY   50 (267)
Q Consensus         2 ayG~tgSGKT~Tl~G~~~~~~~~~Gli~r~~~~lf~~~~~~~~~v~~S~   50 (267)
                      -||+.|+|||+++              ..++++|..........+.+.+
T Consensus        51 l~GppGtGKT~l~--------------~~l~~~l~~~~~~~~~~~~~~~   85 (287)
T d1w5sa2          51 SIGRVGIGKTTLA--------------KFTVKRVSEAAAKEGLTVKQAY   85 (287)
T ss_dssp             CTTCCSSSHHHHH--------------HHHHHHHHHHHHHTTCCEEEEE
T ss_pred             eECCCCCCHHHHH--------------HHHHHHHHhhcccccCCceeee
Confidence            3799999999999              4466666655444443444333

>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Chromosomal replication initiation factor DnaA
species: Aquifex aeolicus [TaxId: 63363]

Probab=86.78  E-value=0.059  Score=41.55  Aligned_cols=13  Identities=62%  Similarity=0.915  Sum_probs=12.1

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||++||||||-+
T Consensus        41 l~G~~G~GKTHLl   53 (213)
T d1l8qa2          41 IYGSVGTGKTHLL   53 (213)
T ss_dssp             EECSSSSSHHHHH
T ss_pred             EECCCCCcHHHHH
Confidence            3899999999999

>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RecA protein-like (ATPase-domain)
domain: Extracellular secretion NTPase EpsE
species: Vibrio cholerae [TaxId: 666]

Probab=83.11  E-value=0.11  Score=44.09  Aligned_cols=12  Identities=58%  Similarity=0.861  Sum_probs=11.3

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      -|+||||||+||
T Consensus       164 tGpTGSGKSTTl  175 (401)
T d1p9ra_         164 TGPTGSGKSTTL  175 (401)
T ss_dssp             ECSTTSCHHHHH
T ss_pred             EcCCCCCccHHH
Confidence            499999999999

>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal recognition particle receptor FtsY
species: Thermus aquaticus [TaxId: 271]

Probab=82.35  E-value=0.12  Score=39.63  Aligned_cols=12  Identities=50%  Similarity=0.745  Sum_probs=11.5

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|+|||.|+
T Consensus        12 vGptGvGKTTTi   23 (207)
T d1okkd2          12 VGVNGVGKTTTI   23 (207)
T ss_dssp             ECSTTSSHHHHH
T ss_pred             ECCCCCCHHHHH
Confidence            699999999999

>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Plasmid maintenance system epsilon/zeta, toxin zeta subunit
domain: Plasmid maintenance system epsilon/zeta, toxin zeta subunit
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.25  E-value=0.14  Score=40.07  Aligned_cols=13  Identities=46%  Similarity=0.493  Sum_probs=11.9

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      -|||+|+|||+..
T Consensus        37 L~GpPGtGKT~la   49 (273)
T d1gvnb_          37 LGGQPGSGKTSLR   49 (273)
T ss_dssp             EECCTTSCTHHHH
T ss_pred             EECCCCCCHHHHH
Confidence            5899999999987

>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Escherichia coli, RepD [TaxId: 562]

Probab=81.97  E-value=0.29  Score=38.84  Aligned_cols=12  Identities=33%  Similarity=0.598  Sum_probs=11.3

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|+.|||||+||
T Consensus        20 ~g~aGTGKTt~l   31 (306)
T d1uaaa1          20 LAGAGSGKTRVI   31 (306)
T ss_dssp             CCCTTSCHHHHH
T ss_pred             EeeCCccHHHHH
Confidence            599999999998

>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Bacillus stearothermophilus, PcrA [TaxId: 1422]

Probab=81.50  E-value=0.26  Score=39.52  Aligned_cols=12  Identities=42%  Similarity=0.625  Sum_probs=11.0

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      -|+.|||||+|+
T Consensus        30 ~g~aGSGKTt~l   41 (318)
T d1pjra1          30 MAGAGSGKTRVL   41 (318)
T ss_dssp             EECTTSCHHHHH
T ss_pred             EecCCccHHHHH
Confidence            489999999998

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Archaeon Acidianus ambivalens [TaxId: 2283]

Probab=81.06  E-value=0.16  Score=38.98  Aligned_cols=12  Identities=50%  Similarity=0.637  Sum_probs=7.3

Q ss_pred             ccCCccCccccc
Q 024439            3 YGQTGTGKTYTL   14 (267)
Q Consensus         3 yG~tgSGKT~Tl   14 (267)
                      .|++|+|||.|+
T Consensus        18 vGptGvGKTTTi   29 (211)
T d1j8yf2          18 VGVQGTGKATTA   29 (211)
T ss_dssp             ECSCCC----HH
T ss_pred             ECCCCCCHHHHH
Confidence            499999999999

>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CDC6, N-domain
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=80.60  E-value=0.15  Score=39.64  Aligned_cols=13  Identities=62%  Similarity=0.866  Sum_probs=11.7

Q ss_pred             cccCCccCccccc
Q 024439            2 AYGQTGTGKTYTL   14 (267)
Q Consensus         2 ayG~tgSGKT~Tl   14 (267)
                      =||++|+|||+++
T Consensus        48 l~GppGtGKT~l~   60 (276)
T d1fnna2          48 LLGRPGTGKTVTL   60 (276)
T ss_dssp             EECCTTSSHHHHH
T ss_pred             EECCCCCCHHHHH
Confidence            3899999999887