Citrus Sinensis ID: 024538

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
Protein Sequence
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Secondary Structure (PSIPRED)
cccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccEEccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHEHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHcHEEEcc
Coil and Loop (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEkimrvpygadneyFKYSLFLVFCNRLMTSAVSAGTLIasrkaidpvapVYKYCLVSMSNILTTTCQYEAlkyvsfpvqtlakCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIfilfpsgadlspyskgrentVWGVSLMVGYlgfdgftstfqdklfkgydmeiHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Flexible Loop (DISEMBL)
MAETLITAigvkdsrvLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTliasrkaidpVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Low Complexity Region (SEG)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Disordered region (IsUnstruct)
****LITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIII**
Disordered Region (DISOPRED)
*****************KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFIL****************TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Disordered Region (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Disordered Region (DISPRO)
**********VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG*********RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFIIIAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	266	2.2.26 [Sep-21-2011]
Q6NMB6	344	UDP-galactose/UDP-glucose	yes	no	0.966	0.747	0.785	1e-122
Q6NM25	347	UDP-galactose/UDP-glucose	no	no	0.894	0.685	0.806	1e-111
Q55DM5	359	Adenosine 3'-phospho 5'-p	yes	no	0.936	0.693	0.447	8e-54
Q91ZN5	431	Adenosine 3'-phospho 5'-p	yes	no	0.943	0.582	0.390	9e-42
Q8TB61	432	Adenosine 3'-phospho 5'-p	yes	no	0.898	0.553	0.368	3e-38
Q5R9A1	432	Adenosine 3'-phospho 5'-p	yes	no	0.898	0.553	0.368	4e-38
Q9VEI3	465	Adenosine 3'-phospho 5'-p	yes	no	0.906	0.518	0.358	3e-32
Q8MXJ9	425	Adenosine 3'-phospho 5'-p	yes	no	0.868	0.543	0.357	2e-27
Q6C4X5	365	UDP-galactose transporter	yes	no	0.887	0.646	0.289	4e-21
O64503	332	UDP-galactose/UDP-glucose	no	no	0.879	0.704	0.304	2e-19

>sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1

 Score =  437 bits (1125), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 233/257 (90%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 241 YHHLDCFFDVALLSTVS 257
             H DC  D+ALLSTV+
Sbjct: 241 SLHRDCLLDIALLSTVA 257

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM25|UTR5_ARATH UDP-galactose/UDP-glucose transporter 5 OS=Arabidopsis thaliana GN=UTR5 PE=2 SV=1

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/238 (80%), Positives = 219/238 (92%)

Query: 20  IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK 79
           +FA+SGIM TLVIYG+LQEKIMRVPYG   EYFK+SLFLVFCNRL TSAVSA  L+AS+K
Sbjct: 21  VFAISGIMLTLVIYGLLQEKIMRVPYGLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKK 80

Query: 80  AIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRY 139
            +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WGTLIMQK+Y
Sbjct: 81  VLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKY 140

Query: 140 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 199
           +G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDK
Sbjct: 141 RGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDK 200

Query: 200 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS 257
           LFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTV+
Sbjct: 201 LFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVA 258

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55DM5|S35B2_DICDI Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Dictyostelium discoideum GN=slc35b2 PE=3 SV=1

 Score =  210 bits (534), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 161/257 (62%), Gaps = 8/257 (3%)

Query: 11  VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPY-GAD--NEYFKYSLFLVFCNRLMTS 67
           V+ S  +K+  A  GIM + ++YGILQE++M VPY  AD   EYF  S FLV  NR+  +
Sbjct: 21  VQLSYNMKLALATGGIMGSFLLYGILQERLMVVPYKNADGSEEYFTDSTFLVLSNRVFAA 80

Query: 68  AVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV 127
            ++   ++   +++  VAP++KY  V++SN   T CQYEALKYV+FP QTL KC KM+PV
Sbjct: 81  LMAIVIVLKRGESLKNVAPLHKYVGVALSNFCATWCQYEALKYVNFPTQTLGKCGKMLPV 140

Query: 128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 187
           M+ GT I  K+Y   DY +AL +T GC IF L    ++         NT +G+ LM  Y+
Sbjct: 141 MLVGTFISGKKYGLKDYSIALTITTGCMIFFLTGKISN-----NESSNTSYGIILMALYM 195

Query: 188 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 247
            FD FTSTFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL G LF AI+F+  H   F
Sbjct: 196 FFDSFTSTFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILNGRLFPAIEFISTHNGVF 255

Query: 248 FDVALLSTVSDLCFIII 264
           FD  +LS  + L  ++I
Sbjct: 256 FDSTMLSASAGLGQMVI 272

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q91ZN5|S35B2_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Mus musculus GN=Slc35b2 PE=2 SV=1

 Score =  170 bits (431), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 151/261 (57%), Gaps = 10/261 (3%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSL 56
           +A    TA      +VLK++F  SG+  + + +GILQE++M   YGA      E+F  S 
Sbjct: 94  LAPRTETAESTPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQ 153

Query: 57  FLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQ 116
           FLV  NR++ + V AG     RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q
Sbjct: 154 FLVLMNRVL-ALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQ 212

Query: 117 TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT 176
            LAK +K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T
Sbjct: 213 VLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSS-PATT 268

Query: 177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLA 236
           + G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L   
Sbjct: 269 LSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEG 327

Query: 237 IDFVYHHLDCFFDVALLSTVS 257
             F+  H +      LLS  S
Sbjct: 328 ARFMGRHSEFALHALLLSICS 348

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Mus musculus (taxid: 10090)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  158 bits (400), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 147/250 (58%), Gaps = 11/250 (4%)

Query: 15  RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSLFLVFCNRLMTSAVS 70
           + LK++F  +G+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V+
Sbjct: 108 QALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVA 167

Query: 71  AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             + +  ++     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ 
Sbjct: 168 GLSCVLCKQPRHG-APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLM 226

Query: 131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
           G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct: 227 GKLVSRRSYEHWEYLTATLISIGVSMFLL-SSGPE--PRSS-PATTLSGLILLAGYIAFD 282

Query: 191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
            FTS +QD LF  Y M     +F     SC+ ++  L+ +G L     F+  H + F   
Sbjct: 283 SFTSNWQDALF-AYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSE-FAAH 340

Query: 251 ALLSTVSDLC 260
           ALL ++   C
Sbjct: 341 ALLLSICSAC 350

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q5R9A1|S35B2_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Pongo abelii GN=SLC35B2 PE=2 SV=2

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 147/250 (58%), Gaps = 11/250 (4%)

Query: 15  RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSLFLVFCNRLMTSAVS 70
           + LK++F  +G+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V+
Sbjct: 108 QALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVA 167

Query: 71  AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             + +  ++     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ 
Sbjct: 168 GLSCVLCKQPRHG-APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKVSKVIPVMLM 226

Query: 131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
           G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct: 227 GKLVSRRSYEHWEYLTATLISIGVSMFLL-SSGPE--PRSSP-ATTLSGLILLAGYIAFD 282

Query: 191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
            FTS +QD LF  Y M     +F     SC+ ++  L+ +G L     F+  H + F   
Sbjct: 283 SFTSNWQDALF-AYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSE-FAAH 340

Query: 251 ALLSTVSDLC 260
           ALL ++   C
Sbjct: 341 ALLLSICSAC 350

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9VEI3|S35B2_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Drosophila melanogaster GN=sll PE=1 SV=1

 Score =  139 bits (349), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 137/248 (55%), Gaps = 7/248 (2%)

Query: 13  DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPY---GADNEYFKYSLFLVFCNRLMTSAV 69
               +++++   G+M + + +G+LQEKIM   Y     ++  FK S FLVF NRL+   V
Sbjct: 139 SQEAVQLLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLV 198

Query: 70  SAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMI 129
           +   L      +   AP+YKY   S SNI++   QYEALK+V+FP Q LAK  K+IPVM+
Sbjct: 199 ALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVML 258

Query: 130 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGF 189
            G ++ + +Y+ Y+Y  ALL++LG    I F SG+  S  + G   T+ G+ L+  Y+ F
Sbjct: 259 MGKIMSKAKYESYEYVTALLISLG---MIFFMSGSSDSSKASG-VTTLTGIFLLSMYMVF 314

Query: 190 DGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 249
           D FT+ +Q  LFK Y M     +    L S + + + L ++G    ++ F   H    FD
Sbjct: 315 DSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFD 374

Query: 250 VALLSTVS 257
           + +LS  S
Sbjct: 375 MVVLSVCS 382

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Required for the dorsoventral patterning, suggesting that it mediates the transport of the sulfate donor required for the sulfotransferase activity of pip (pipe).

Drosophila melanogaster (taxid: 7227)

>sp|Q8MXJ9|S35B2_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Caenorhabditis elegans GN=pst-1 PE=3 SV=4

 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 131/252 (51%), Gaps = 21/252 (8%)

Query: 16  VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEY-----FKYSLFLVFCNRLMTSAVS 70
           ++ ++F  SGI  TLV  G+LQE+I+   Y   ++      F  + FL+FCNR++   +S
Sbjct: 103 IILLLFFFSGIQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRIVALVLS 162

Query: 71  AGTLIASRKAIDP-VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMI 129
              L        P V P+Y +   S SN +++ CQYEALKYVSFP QT+ K +K++  M+
Sbjct: 163 LMILAKDWTKQPPHVPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQTICKASKVVVTML 222

Query: 130 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS-GADLSPYSKGRENTVW-----GVSLM 183
            G L+  +RY  ++Y        GC   I F +    LS  SKG  +T+      G+ LM
Sbjct: 223 MGRLVRGQRYSWFEY--------GCGCTIAFGASLFLLSSSSKGAGSTITYTSFSGMILM 274

Query: 184 VGYLGFDGFTSTFQDKLFKGY-DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH 242
            GYL FD FT  +Q  LF     +  +  +F     S +L    LI +G L+ +I F   
Sbjct: 275 AGYLLFDAFTLNWQKALFDTKPKVSKYQMMFGVNFFSAILCAVSLIEQGTLWSSIKFGAE 334

Query: 243 HLDCFFDVALLS 254
           H+D   DV LLS
Sbjct: 335 HVDFSRDVFLLS 346

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6C4X5|HUT1_YARLI UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 16/252 (6%)

Query: 16  VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTL- 74
           ++ +I  VSGI  + + + +LQE+I   PYG DN+ F+ SL +      + +AV    L 
Sbjct: 42  IIDLIICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVINTVQSFLAAAVGYAYLQ 101

Query: 75  -IASRKA----------IDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAK 123
              SR+A           D +  + +  LV++S  L +   Y ALKYV +    LAK  K
Sbjct: 102 YKQSRRAAKGLKKNTTVFDSMYTLKQLSLVALSQSLASPLSYTALKYVDYLTSILAKSCK 161

Query: 124 MIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLM 183
           +IP+M     + ++++  Y Y + +LVT+G S+F +F   A       G E+ ++G+ L+
Sbjct: 162 LIPLMALQVTLYRRKFPAYKYAVVVLVTIGVSMFTIF-HAAPKKASGAGSEHQLYGLGLL 220

Query: 184 VGYLGFDGFTSTFQDKLF-KGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFV 240
              +  DG T++ QD++F K  D+   + +    L + V +   L+      L  AI F+
Sbjct: 221 GISMLLDGLTNSTQDQIFRKNADITGPHVMCGLNLLTGVFTTVSLLTFSRPQLDTAIAFI 280

Query: 241 YHHLDCFFDVAL 252
             H +   D+ L
Sbjct: 281 RLHPEIMRDIVL 292

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|O64503|UTR1_ARATH UDP-galactose/UDP-glucose transporter 1 OS=Arabidopsis thaliana GN=UTR1 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 6/240 (2%)

Query: 15  RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTL 74
           R+L +   +SGI +  +  G+LQE +    +G D + F++  FL     ++    S   +
Sbjct: 10  RILLLALCISGIWSAYIYQGVLQETLSTKRFGPDEKRFEHLAFLNLAQSVVCLIWSYIMI 69

Query: 75  IASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI 134
                A +  AP + Y    ++N +      EALKY+S+P Q LAK +KMIPVM+ GTL+
Sbjct: 70  KLWSNAGNGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLV 129

Query: 135 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK-GRENTVWGVSLMVGYLGFDGFT 193
              RY   +Y    LV  G SIF L  + +     SK    N   G +L    L FDGFT
Sbjct: 130 YGIRYTFPEYMCTFLVAGGVSIFALLKTSSKT--ISKLAHPNAPLGYALCSLNLAFDGFT 187

Query: 194 STFQDKLFKGY-DMEIHNQIFYTTLCSCVLSLSGL--ILEGHLFLAIDFVYHHLDCFFDV 250
           +  QD +   Y   E  + +    L   + ++  +  + +G  F AI F   H +  +D+
Sbjct: 188 NATQDSIASRYPKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFKAIQFCKLHPEAAWDI 247

Essential sugar transporter required for the transport of UDP-galactose and UDP-glucose from the cytoplasm into the Golgi and the endoplasmic reticulum, to ensure quality control of protein folding. Essential for pollen development and involved in embryo sac progress.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
255580568	349	Adenosine 3'-phospho 5'-phosphosulfate t	0.943	0.719	0.804	1e-122
51969060	344	unnamed protein product [Arabidopsis tha	0.966	0.747	0.785	1e-120
15238511	344	UDP-N-acetylglucosamine (UAA) transporte	0.966	0.747	0.785	1e-120
297796921	344	hypothetical protein ARALYDRAFT_332244 [	0.966	0.747	0.789	1e-120
225435088	344	PREDICTED: adenosine 3'-phospho 5'-phosp	0.924	0.715	0.821	1e-120
356557455	351	PREDICTED: adenosine 3'-phospho 5'-phosp	0.924	0.700	0.796	1e-118
224054863	347	predicted protein [Populus trichocarpa]	0.962	0.737	0.801	1e-118
356547228	352	PREDICTED: adenosine 3'-phospho 5'-phosp	0.977	0.738	0.761	1e-118
449460973	361	PREDICTED: UDP-galactose/UDP-glucose tra	0.924	0.681	0.788	1e-118
356542497	353	PREDICTED: adenosine 3'-phospho 5'-phosp	0.924	0.696	0.772	1e-115

>gi|255580568|ref|XP_002531108.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223529304|gb|EEF31273.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/251 (80%), Positives = 235/251 (93%)

Query: 7   TAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMT 66
           +++GVKD+++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FKYSLFLVFCNR+ T
Sbjct: 10  SSVGVKDNKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKYSLFLVFCNRITT 69

Query: 67  SAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 126
           SAVSA  L+AS+KA++PVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMIP
Sbjct: 70  SAVSAAVLLASKKALNPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 129

Query: 127 VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGY 186
           VMIWGT+IMQKRYKG DY LA LVTLGCS+FILFP+G D+SPYS+GRENTVWGVSLM+GY
Sbjct: 130 VMIWGTVIMQKRYKGMDYLLAFLVTLGCSVFILFPAGTDISPYSRGRENTVWGVSLMLGY 189

Query: 187 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC 246
           LGFDGFTSTFQDKLFKGYDMEIHNQIFYTT+CSC+LS +GL+++GHL  AIDFVY H DC
Sbjct: 190 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTVCSCILSFTGLLIQGHLLPAIDFVYRHNDC 249

Query: 247 FFDVALLSTVS 257
           FFD+ALLSTV+
Sbjct: 250 FFDIALLSTVA 260

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51969060|dbj|BAD43222.1| unnamed protein product [Arabidopsis thaliana] gi|51969064|dbj|BAD43224.1| unnamed protein product [Arabidopsis thaliana]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 233/257 (90%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 241 YHHLDCFFDVALLSTVS 257
             H DC  D+ALLSTV+
Sbjct: 241 SLHRDCLLDIALLSTVA 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238511|ref|NP_200782.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana] gi|75127032|sp|Q6NMB6.1|UTR5B_ARATH RecName: Full=UDP-galactose/UDP-glucose transporter 5B; Short=AtUTr5B gi|44917565|gb|AAS49107.1| At5g59740 [Arabidopsis thaliana] gi|332009843|gb|AED97226.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 233/257 (90%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 241 YHHLDCFFDVALLSTVS 257
             H DC  D+ALLSTV+
Sbjct: 241 SLHRDCLLDIALLSTVA 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796921|ref|XP_002866345.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata] gi|297312180|gb|EFH42604.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/257 (78%), Positives = 232/257 (90%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE      GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + +YFK+SLFLVF
Sbjct: 1   MAEPETVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKDYFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
           CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  AIDFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLSAIDFV 240

Query: 241 YHHLDCFFDVALLSTVS 257
             H DC  D+ALLSTV+
Sbjct: 241 SLHRDCLLDIALLSTVA 257

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435088|ref|XP_002281454.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Vitis vinifera] gi|297746141|emb|CBI16197.3| unnamed protein product [Vitis vinifera]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 202/246 (82%), Positives = 226/246 (91%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           K++R  K + AV GIMTTLVIYG+LQEKIMRVPYGAD EYFKYSLFLVFCNR+ TSAVSA
Sbjct: 11  KENRFWKGVLAVVGIMTTLVIYGVLQEKIMRVPYGADKEYFKYSLFLVFCNRITTSAVSA 70

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131
           G L+AS+KA+DPVAPVYKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct: 71  GALLASKKALDPVAPVYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 130

Query: 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 191
           TLIMQKRY+G DY LA LVT+GCS FIL+P  +D+SPYSKGRENTVWGVSLM+GYLGFDG
Sbjct: 131 TLIMQKRYRGPDYLLAFLVTVGCSFFILYPVASDISPYSKGRENTVWGVSLMMGYLGFDG 190

Query: 192 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251
           FTSTFQDKLF+GY+MEIHNQIFYTTLCSC+LSL+GLI +GHL LAIDFV  H DCFFD+ 
Sbjct: 191 FTSTFQDKLFRGYNMEIHNQIFYTTLCSCILSLAGLIFQGHLPLAIDFVRRHNDCFFDIV 250

Query: 252 LLSTVS 257
           LLSTV+
Sbjct: 251 LLSTVA 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557455|ref|XP_003547031.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/246 (79%), Positives = 228/246 (92%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           +D++  K  FAV+GIM TLV YG+LQEKIMRVPYGA+ EYFK+SLFLVFCNR+ TSAVSA
Sbjct: 17  RDNKFWKGAFAVAGIMLTLVTYGVLQEKIMRVPYGAEKEYFKHSLFLVFCNRITTSAVSA 76

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131
            +L+AS+KA+DPVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAK IPVM+WG
Sbjct: 77  CSLLASKKAMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKTIPVMVWG 136

Query: 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 191
            LIMQKRY+G DY LA L+TLGCS+FIL+P+GAD+SPYS+GRENTVWGV LMVGYLGFDG
Sbjct: 137 ALIMQKRYQGPDYLLAFLITLGCSVFILYPAGADMSPYSRGRENTVWGVLLMVGYLGFDG 196

Query: 192 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251
           FTSTFQDKLF+GYDMEIHNQIFYTTLCSC+LSL+GLIL+GHL  A++FVY+H DCFFD+A
Sbjct: 197 FTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAVEFVYNHHDCFFDIA 256

Query: 252 LLSTVS 257
           LLSTV+
Sbjct: 257 LLSTVA 262

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054863|ref|XP_002298378.1| predicted protein [Populus trichocarpa] gi|222845636|gb|EEE83183.1| predicted protein [Populus trichocarpa]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/257 (80%), Positives = 242/257 (94%), Gaps = 1/257 (0%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MA++L++  GVK++++ K + AV+GIMTTLVIYG+LQEKIMRVPYG++ E+FKYSLFLVF
Sbjct: 1   MADSLLSG-GVKENKLWKGVLAVAGIMTTLVIYGLLQEKIMRVPYGSNKEFFKYSLFLVF 59

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
           CNR+ TSAVSA  L+AS+KA++PVAPV+KYCL+S+SNILTTTCQYEALKYVSFPVQTLAK
Sbjct: 60  CNRITTSAVSAAALVASKKALNPVAPVHKYCLISVSNILTTTCQYEALKYVSFPVQTLAK 119

Query: 121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
           CAKMIPVM+WGT+IMQKRYKG DYFLALLVTLGCSIFILFP+G ++SPYS+GRENTVWGV
Sbjct: 120 CAKMIPVMVWGTIIMQKRYKGMDYFLALLVTLGCSIFILFPAGTEISPYSRGRENTVWGV 179

Query: 181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
           SLM+GYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC+LSL+GL+L+GHL  AIDFV
Sbjct: 180 SLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCILSLTGLVLQGHLLPAIDFV 239

Query: 241 YHHLDCFFDVALLSTVS 257
           + H DCFFD+ALLSTV+
Sbjct: 240 FRHNDCFFDIALLSTVA 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547228|ref|XP_003542018.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/260 (76%), Positives = 229/260 (88%)

Query: 6   ITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLM 65
           + +I   + +  K  F V+GIM TLV YG+LQEKIMRVPYG + EYFK+SLFLVFCNR+ 
Sbjct: 12  VDSIPRDNDKFWKGSFTVAGIMVTLVTYGLLQEKIMRVPYGTEKEYFKHSLFLVFCNRIT 71

Query: 66  TSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMI 125
           TSAVSAG+L+AS+K +DPVAP+YKYCL+S+SNILTTTCQYEALKYVSFPVQTLAKCAKMI
Sbjct: 72  TSAVSAGSLLASKKVLDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMI 131

Query: 126 PVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVG 185
           PVM+WG LIMQKRY+G DY LA LVTLGCS FIL+P+G D+SPYS+GRENTVWG+ LMVG
Sbjct: 132 PVMVWGALIMQKRYQGPDYLLAFLVTLGCSAFILYPAGTDMSPYSRGRENTVWGILLMVG 191

Query: 186 YLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD 245
           YLGFDGFTSTFQDKLF+GYDMEIHNQIFYTTLCSCVLSL+GLIL+GHL  AI+FVYHH D
Sbjct: 192 YLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCVLSLTGLILQGHLIPAIEFVYHHHD 251

Query: 246 CFFDVALLSTVSDLCFIIIA 265
           CFFD+ALLSTV+ +    I+
Sbjct: 252 CFFDIALLSTVATISQFFIS 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460973|ref|XP_004148218.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus] gi|449527659|ref|XP_004170827.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus]

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/246 (78%), Positives = 230/246 (93%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           KD+++ K +FAV+GIMTTLV YG+LQEKIMRVPYG + +YFK+SLFLVFCNR+ TSAVSA
Sbjct: 7   KDNKLWKGLFAVAGIMTTLVTYGVLQEKIMRVPYGVNKDYFKHSLFLVFCNRITTSAVSA 66

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131
           G L+AS+K +DPVAPVYKYCLVS++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct: 67  GVLLASKKTVDPVAPVYKYCLVSITNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 126

Query: 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 191
           T+IMQK+YKG+DY LAL+VTLGCSIF+L+P+ A++SPY +GRE+TVWGVSLM+GYLGFDG
Sbjct: 127 TIIMQKKYKGHDYLLALIVTLGCSIFVLYPASAEISPYDRGRESTVWGVSLMIGYLGFDG 186

Query: 192 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251
           FTSTFQDKLFKGY+M+IHNQIFYTTLCSC+LSL+GLIL+GHL  AI+FVY H DCFFD+A
Sbjct: 187 FTSTFQDKLFKGYNMDIHNQIFYTTLCSCILSLTGLILQGHLLPAIEFVYLHKDCFFDIA 246

Query: 252 LLSTVS 257
            LSTV+
Sbjct: 247 FLSTVA 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542497|ref|XP_003539703.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 190/246 (77%), Positives = 225/246 (91%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           +++++ K  FAV+GIM TLV YG+LQEKIMRVPYG + +YFKYSLFLVFCNR+ TSAVSA
Sbjct: 19  RENKLWKGTFAVAGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSA 78

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131
           G L+AS+KA+DPVAP+YKYCLVS+SNILTT+CQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct: 79  GALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWG 138

Query: 132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 191
           T IMQKRY+G DY LA +VTLGCS+FIL+P+G D+SPY +GRENTVWGV LM+GYLG DG
Sbjct: 139 TAIMQKRYRGTDYLLAFVVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDG 198

Query: 192 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251
           FTSTFQDK+FKGY+MEIHNQIFYTTLCSC+LSL+GLI++GHL  A++FVY H DCFFD+A
Sbjct: 199 FTSTFQDKMFKGYNMEIHNQIFYTTLCSCILSLAGLIIQGHLLPAVEFVYIHKDCFFDIA 258

Query: 252 LLSTVS 257
           LLSTV+
Sbjct: 259 LLSTVA 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
TAIR|locus:2174289	344	AT5G59740 "AT5G59740" [Arabido	0.966	0.747	0.785	5.3e-111
TAIR|locus:2075311	347	UTR5 "AT3G46180" [Arabidopsis	0.924	0.708	0.788	6.3e-108
DICTYBASE|DDB_G0269602	359	slc35b2 "solute carrier family	0.913	0.676	0.458	9.2e-52
ZFIN|ZDB-GENE-050213-1	435	slc35b2 "solute carrier family	0.890	0.544	0.395	6.6e-42
MGI|MGI:1921086	431	Slc35b2 "solute carrier family	0.921	0.568	0.396	5.9e-41
RGD|1565318	431	Slc35b2 "solute carrier family	0.921	0.568	0.388	1.6e-40
UNIPROTKB|F1NC34	431	SLC35B2 "Uncharacterized prote	0.898	0.554	0.4	4.2e-40
UNIPROTKB|Q3ZBB0	433	SLC35B2 "Uncharacterized prote	0.898	0.551	0.388	6.8e-40
UNIPROTKB|F1RQU1	448	SLC35B2 "Uncharacterized prote	0.898	0.533	0.38	4.8e-39
UNIPROTKB|F1PA99	414	SLC35B2 "Uncharacterized prote	0.898	0.577	0.384	7.8e-39

TAIR|locus:2174289 AT5G59740 "AT5G59740" [Arabidopsis thaliana (taxid:3702)]

 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 202/257 (78%), Positives = 233/257 (90%)

Query:     1 MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
             MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct:     1 MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query:    61 CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK 120
             CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAK
Sbjct:    61 CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query:   121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 180
             CAKMIPVM+WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct:   121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query:   181 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 240
             SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct:   181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query:   241 YHHLDCFFDVALLSTVS 257
               H DC  D+ALLSTV+
Sbjct:   241 SLHRDCLLDIALLSTVA 257

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

TAIR|locus:2075311 UTR5 "AT3G46180" [Arabidopsis thaliana (taxid:3702)]

 Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
 Identities = 194/246 (78%), Positives = 223/246 (90%)

Query:    12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
             K  ++ K +FA+SGIM TLVIYG+LQEKIMRVPYG   EYFK+SLFLVFCNRL TSAVSA
Sbjct:    13 KKKKLWKAVFAISGIMLTLVIYGLLQEKIMRVPYGLKKEYFKHSLFLVFCNRLTTSAVSA 72

Query:    72 GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWG 131
               L+AS+K +DPVAPVYKYCL+S++NILTTTCQYEALKYVSFPVQTLAKCAKMIPVM+WG
Sbjct:    73 AALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 132

Query:   132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 191
             TLIMQK+Y+G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLGFDG
Sbjct:   133 TLIMQKKYRGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDG 192

Query:   192 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 251
             FTSTFQDKLFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC FD+A
Sbjct:   193 FTSTFQDKLFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIA 252

Query:   252 LLSTVS 257
             LLSTV+
Sbjct:   253 LLSTVA 258

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0269602 slc35b2 "solute carrier family 35 member B2" [Dictyostelium discoideum (taxid:44689)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 115/251 (45%), Positives = 161/251 (64%)

Query:    17 LKMIFAVSGIMTTLVIYGILQEKIMRVPY-GADN--EYFKYSLFLVFCNRLMTSAVSAGT 73
             +K+  A  GIM + ++YGILQE++M VPY  AD   EYF  S FLV  NR+  + ++   
Sbjct:    27 MKLALATGGIMGSFLLYGILQERLMVVPYKNADGSEEYFTDSTFLVLSNRVFAALMAIVI 86

Query:    74 LIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTL 133
             ++   +++  VAP++KY  V++SN   T CQYEALKYV+FP QTL KC KM+PVM+ GT 
Sbjct:    87 VLKRGESLKNVAPLHKYVGVALSNFCATWCQYEALKYVNFPTQTLGKCGKMLPVMLVGTF 146

Query:   134 IMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFT 193
             I  K+Y   DY +AL +T GC IF L  +G  +S  +    NT +G+ LM  Y+ FD FT
Sbjct:   147 ISGKKYGLKDYSIALTITTGCMIFFL--TGK-IS--NNESSNTSYGIILMALYMFFDSFT 201

Query:   194 STFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 253
             STFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL G LF AI+F+  H   FFD  +L
Sbjct:   202 STFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILNGRLFPAIEFISTHNGVFFDSTML 261

Query:   254 STVSDLCFIII 264
             S  + L  ++I
Sbjct:   262 SASAGLGQMVI 272

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-050213-1 slc35b2 "solute carrier family 35, member B2" [Danio rerio (taxid:7955)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 98/248 (39%), Positives = 147/248 (59%)

Query:    15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADN-----EYFKYSLFLVFCNRLMTSAV 69
             +  K+IF  +G+  + + +G+LQE++M   YG+       E F+ S FLVF NR++   V
Sbjct:   112 QAFKLIFCAAGLQVSYLTWGVLQERVMTRSYGSSEAEGSGERFRDSQFLVFMNRILALTV 171

Query:    70 SAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMI 129
             S G      K     AP+YKY   S+SNIL++ CQYEALK++SFP Q LAK +K+IPVM+
Sbjct:   172 S-GLWCVLFKQPRHGAPMYKYSFASLSNILSSWCQYEALKFISFPTQVLAKASKVIPVML 230

Query:   130 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGF 189
              G ++ +K Y+ ++Y  A+L++LG S+F+L  S  D  P +     T  GV ++ GY+ F
Sbjct:   231 MGKIVSRKSYEYWEYLTAVLISLGVSMFLL-SSSTDKHPSTV---TTFSGVLILAGYIVF 286

Query:   190 DGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 249
             D FTS +QD LFK Y M     +F   L SC+ ++  L+ +G  F ++ F+  H +  F 
Sbjct:   287 DSFTSNWQDNLFK-YKMSSVQMMFGVNLFSCLFTVGSLLEQGAFFNSLAFMTRHSEFAFH 345

Query:   250 VALLSTVS 257
               LLS  S
Sbjct:   346 AVLLSVCS 353

GO:0055085 "transmembrane transport" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0001649 "osteoblast differentiation" evidence=IMP

MGI|MGI:1921086 Slc35b2 "solute carrier family 35, member B2" [Mus musculus (taxid:10090)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 101/255 (39%), Positives = 148/255 (58%)

Query:     7 TAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGAD----NEYFKYSLFLVFCN 62
             TA      +VLK++F  SG+  + + +GILQE++M   YGA      E+F  S FLV  N
Sbjct:   100 TAESTPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMN 159

Query:    63 RLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCA 122
             R++   V AG     RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +
Sbjct:   160 RVLALVV-AGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKAS 218

Query:   123 KMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSL 182
             K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L
Sbjct:   219 KVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVL 274

Query:   183 MVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH 242
             + GY+ FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  
Sbjct:   275 LAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGR 333

Query:   243 HLDCFFDVALLSTVS 257
             H +      LLS  S
Sbjct:   334 HSEFALHALLLSICS 348

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1565318 Slc35b2 "solute carrier family 35, member B2" [Rattus norvegicus (taxid:10116)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 99/255 (38%), Positives = 148/255 (58%)

Query:     7 TAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGAD----NEYFKYSLFLVFCN 62
             TA      +VLK++F  +G+  + + +G+LQE++M   YGA      E+F  S FLV  N
Sbjct:   100 TAESTPSWQVLKLVFCAAGLQVSYLTWGVLQERVMTGSYGATATSPGEHFTDSQFLVLMN 159

Query:    63 RLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCA 122
             R++   V AG     RK     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +
Sbjct:   160 RVLALVV-AGLYCILRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKAS 218

Query:   123 KMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSL 182
             K+IPVM+ G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L
Sbjct:   219 KVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVL 274

Query:   183 MVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH 242
             + GY+ FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  
Sbjct:   275 LAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGR 333

Query:   243 HLDCFFDVALLSTVS 257
             H +      LLS  S
Sbjct:   334 HSEFALHALLLSVCS 348

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA;ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA;ISO

UNIPROTKB|F1NC34 SLC35B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 100/250 (40%), Positives = 147/250 (58%)

Query:    15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADN----EYFKYSLFLVFCNRLMTSAVS 70
             +VLK++F  +G+  + + +G++QE++M   YGA      E FK S FLVF NR++   V 
Sbjct:   107 QVLKLLFCAAGLQVSYLTWGVVQERVMTRTYGATETDPGEKFKDSQFLVFMNRILAFTV- 165

Query:    71 AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             AG   A  K     A +YKY   S+SNIL++ CQYEALKY+SFP Q LAK +K+IPVM+ 
Sbjct:   166 AGLYCALTKQPRHGAAMYKYSFASLSNILSSWCQYEALKYISFPTQVLAKASKVIPVMMM 225

Query:   131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
             G L+  K Y+ ++Y  A L+++G S+F+L  S A     S     T  GV L+ GY+ FD
Sbjct:   226 GKLVSHKSYEYWEYLTAALISVGVSMFLL--SSAPNRHVST--VTTFSGVVLLAGYIVFD 281

Query:   191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
              FTS +QD LF  Y M     +F   + SC+ ++  L+ +G L  ++ F+  H + F   
Sbjct:   282 SFTSNWQDALFT-YKMSPVQMMFGVNVFSCLFTVGSLLEQGALLESVHFMARHSE-FTAH 339

Query:   251 ALLSTVSDLC 260
             A+L +V   C
Sbjct:   340 AVLLSVCSAC 349

GO:0016021 "integral to membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q3ZBB0 SLC35B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 97/250 (38%), Positives = 147/250 (58%)

Query:    15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGAD----NEYFKYSLFLVFCNRLMTSAVS 70
             + LK++F  SG+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V 
Sbjct:   109 QALKLLFCASGLQVSYLTWGVLQERVMTRSYGATATSPGERFSDSQFLVLMNRILALMV- 167

Query:    71 AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             AG      K     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ 
Sbjct:   168 AGVYCILCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLM 227

Query:   131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
             G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P+S     T+ G+ L+ GY+ FD
Sbjct:   228 GKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PHSSPA-TTLSGLILLAGYIAFD 283

Query:   191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
              FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L   I F+  H + F   
Sbjct:   284 SFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGIRFMGRHSE-FAAH 341

Query:   251 ALLSTVSDLC 260
              LL ++   C
Sbjct:   342 TLLLSICSAC 351

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RQU1 SLC35B2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 95/250 (38%), Positives = 146/250 (58%)

Query:    15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGAD----NEYFKYSLFLVFCNRLMTSAVS 70
             + LK++F  SG+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V 
Sbjct:   124 QALKLLFCASGLQVSYLTWGVLQERVMTRSYGATATSPGERFSDSQFLVLMNRVLALIV- 182

Query:    71 AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             AG      K     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ 
Sbjct:   183 AGFYCILCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLM 242

Query:   131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
             G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P+S     T+ G+ L+ GY+ FD
Sbjct:   243 GKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PHSSPA-TTLSGLILLAGYIAFD 298

Query:   191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
              FTS +QD LF  Y M     +F     SC+ ++  L+ +G L   + F+  H + F   
Sbjct:   299 SFTSNWQDALF-AYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGVRFMGRHSE-FAAH 356

Query:   251 ALLSTVSDLC 260
              LL ++   C
Sbjct:   357 TLLLSICSAC 366

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PA99 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 96/250 (38%), Positives = 146/250 (58%)

Query:    15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGAD----NEYFKYSLFLVFCNRLMTSAVS 70
             + LK++F  +G+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V 
Sbjct:    90 QALKLLFCAAGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIV- 148

Query:    71 AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIW 130
             AG      K     AP+Y+Y   S+SN+L++ CQYEALK+VSFP Q LAK +K+IPVM+ 
Sbjct:   149 AGLYCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLM 208

Query:   131 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 190
             G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct:   209 GKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLILLAGYIAFD 264

Query:   191 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 250
              FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H + F   
Sbjct:   265 SFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGTRFMGRHSE-FAAH 322

Query:   251 ALLSTVSDLC 260
             ALL ++   C
Sbjct:   323 ALLLSICSAC 332

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NMB6	UTR5B_ARATH	No assigned EC number	0.7859	0.9661	0.7470	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	266
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-59

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  189 bits (482), Expect = 4e-59
 Identities = 77/243 (31%), Positives = 107/243 (44%), Gaps = 8/243 (3%)

Query: 20  IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK 79
           +  +SGI       G+LQE IM   YG+      +   L F   L  S V    L+  +K
Sbjct: 2   LICISGIFGGYCSNGVLQELIMTREYGSP-----FGNLLTFAQFLFISLVGLLYLLLFKK 56

Query: 80  AIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRY 139
                 P+  Y L+  +  L++    EALKY+S+P   + K  K+IPVMI G LI  KRY
Sbjct: 57  LKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRY 116

Query: 140 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 199
               Y  ALL+TLG  IF L  +    +       +   G++L+ G L  D  T   Q+K
Sbjct: 117 SSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDN-VGIALLFGALLMDALTGNTQEK 175

Query: 200 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFL--AIDFVYHHLDCFFDVALLSTVS 257
           L+K Y       +FY+ L S    L GL+      L  A  F   H    F + L S   
Sbjct: 176 LYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQ 235

Query: 258 DLC 260
            + 
Sbjct: 236 YVG 238

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	266
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.85
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.8
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.73
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.72
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.59
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.52
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.51
KOG2766	336	consensus Predicted membrane protein [Function unk	99.2
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.2
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.12
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.04
PRK11272	292	putative DMT superfamily transporter inner membran	98.72
PLN00411	358	nodulin MtN21 family protein; Provisional	98.66
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.65
PRK11689	295	aromatic amino acid exporter; Provisional	98.48
KOG2765	416	consensus Predicted membrane protein [Function unk	98.4
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.4
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.39
PRK15430	296	putative chloramphenical resistance permease RarD;	98.33
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.32
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.17
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.16
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.72
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.53
PLN00411	358	nodulin MtN21 family protein; Provisional	97.39
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.02
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.93
PRK11272	292	putative DMT superfamily transporter inner membran	96.9
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.88
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	96.74
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.53
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	96.36
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.23
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.15
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.91
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.73
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.49
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	95.42
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	95.11
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.99
PRK15430	296	putative chloramphenical resistance permease RarD;	94.97
COG2962	293	RarD Predicted permeases [General function predict	94.9
PRK11689	295	aromatic amino acid exporter; Provisional	94.86
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.68
COG2510	140	Predicted membrane protein [Function unknown]	94.67
COG2076	106	EmrE Membrane transporters of cations and cationic	94.2
PRK10650	109	multidrug efflux system protein MdtI; Provisional	94.17
PRK11431	105	multidrug efflux system protein; Provisional	94.11
COG2962	293	RarD Predicted permeases [General function predict	93.25
COG0697	292	RhaT Permeases of the drug/metabolite transporter	92.8
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	90.89
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	90.74
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	87.79
KOG1582	367	consensus UDP-galactose transporter related protei	86.22
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	85.24
KOG2765	416	consensus Predicted membrane protein [Function unk	84.45

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.1e-64  Score=440.71  Aligned_cols=255  Identities=47%  Similarity=0.794  Sum_probs=241.0

Q ss_pred             ccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhH
Q 024538           10 GVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK   89 (266)
Q Consensus        10 ~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~   89 (266)
                      |.+.++.+++++|+.|||++|+.||++||||+|.+|++++++|+++.||++||++.+.+++.+++.++++..+++.|+++
T Consensus         6 ~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~   85 (327)
T KOG1581|consen    6 GGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYK   85 (327)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhH
Confidence            34567889999999999999999999999999999999999999999999999999999999999888866778899999


Q ss_pred             HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 024538           90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  169 (266)
Q Consensus        90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~  169 (266)
                      |...|+.+..+.+++++||||+|||||+++||||+||||++|.+++||||+++||++++++++|+.+|++.++++  +++
T Consensus        86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~--s~~  163 (327)
T KOG1581|consen   86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD--SSS  163 (327)
T ss_pred             HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC--Ccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999997543  223


Q ss_pred             CCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHH
Q 024538          170 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD  249 (266)
Q Consensus       170 ~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~  249 (266)
                      +.+.+++++|+.++..++++||+++++||+++++++.++++||+++|+|++++.+..++..|.+.++++|+.+|||+.+|
T Consensus       164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~D  243 (327)
T KOG1581|consen  164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFD  243 (327)
T ss_pred             ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHH
Confidence            33457899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhcC
Q 024538          250 VALLSTVSDLCFIIIAS  266 (266)
Q Consensus       250 ~~~~s~~~a~Gq~~i~~  266 (266)
                      ++++|+|||+||.||++
T Consensus       244 i~l~s~~gavGQ~FI~~  260 (327)
T KOG1581|consen  244 ILLYSTCGAVGQLFIFY  260 (327)
T ss_pred             HHHHHHhhhhhhheehh
Confidence            99999999999999974

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=9e-58  Score=389.51  Aligned_cols=252  Identities=29%  Similarity=0.447  Sum_probs=233.1

Q ss_pred             cccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCC---CCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 024538            9 IGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA---DNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVA   85 (266)
Q Consensus         9 ~~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~---~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~   85 (266)
                      ..|-.+++.++.+|++||++||..||+.||||++.+||.   .+|+|+|..-|++.||..+.+++-+....|++...++.
T Consensus         4 ~~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t   83 (337)
T KOG1580|consen    4 VRSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT   83 (337)
T ss_pred             cccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC
Confidence            445567788999999999999999999999999999984   45899999999999999999999887777765455679


Q ss_pred             chhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCC
Q 024538           86 PVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGAD  165 (266)
Q Consensus        86 p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~  165 (266)
                      |-+.|+.+|..+.++++.+|.|++|+|||||++.|||||||||++|+++.+|+|+|++|.+|.+|++|+++|++.+.+  
T Consensus        84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--  161 (337)
T KOG1580|consen   84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--  161 (337)
T ss_pred             cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999998531  


Q ss_pred             CCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChH
Q 024538          166 LSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD  245 (266)
Q Consensus       166 ~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~  245 (266)
                        ..+.+++...+|-++++.|+-+||.+++.|||+.+.|+.+..+||+|+|+|+++.+..+++++||+.+.+.|..|||+
T Consensus       162 --v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~  239 (337)
T KOG1580|consen  162 --VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPY  239 (337)
T ss_pred             --cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccH
Confidence              122235678899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhh
Q 024538          246 CFFDVALLSTVSDLCFIII  264 (266)
Q Consensus       246 ~~~~~~~~s~~~a~Gq~~i  264 (266)
                      +++|+.++++||++||.||
T Consensus       240 ~~~~l~l~ai~s~LGQ~fI  258 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFI  258 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHH
Confidence            9999999999999999998

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.4e-51  Score=354.43  Aligned_cols=247  Identities=27%  Similarity=0.393  Sum_probs=227.7

Q ss_pred             hhhhcccCccchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCcee-ehHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 024538            5 LITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDP   83 (266)
Q Consensus         5 ~~~~~~~~~~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~-~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~   83 (266)
                      |....-++.+++.|+++|+.|+++.|+.|||+||.|++.      ++|+ |++++|+.|++..+.++++++...+. .++
T Consensus        30 llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~------~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~r  102 (367)
T KOG1582|consen   30 LLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNV------EGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KRR  102 (367)
T ss_pred             EEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhcc------ccCcccchHHHHHHHHHHHhhhheEEEeecc-cce
Confidence            344556788999999999999999999999999999974      4677 99999999999998888777654443 356


Q ss_pred             CcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538           84 VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  163 (266)
Q Consensus        84 ~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~  163 (266)
                      ..|+|.|.++|+...+++.++|.++.|+|||+|+++||||++|||++|.++.+|||+++||.++.+++.|+++|+++|++
T Consensus       103 ~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~  182 (367)
T KOG1582|consen  103 VIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQ  182 (367)
T ss_pred             ecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999752


Q ss_pred             CCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhC
Q 024538          164 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH  243 (266)
Q Consensus       164 ~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~  243 (266)
                        .     ++++++.|+.++..++++||+.++.||+.++.++.++.||++|..-.+.++.++.++.+||+.+++.|+.+|
T Consensus       183 --~-----sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaeh  255 (367)
T KOG1582|consen  183 --T-----SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEH  255 (367)
T ss_pred             --c-----CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhC
Confidence              1     158999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hH-HHHHHHHHHHhhhhhhhhhc
Q 024538          244 LD-CFFDVALLSTVSDLCFIIIA  265 (266)
Q Consensus       244 p~-~~~~~~~~s~~~a~Gq~~i~  265 (266)
                      |. ...+.+.+|+++.+||.++.
T Consensus       256 p~~tyGy~~~~s~~gylG~~~VL  278 (367)
T KOG1582|consen  256 PVRTYGYAFLFSLAGYLGIVFVL  278 (367)
T ss_pred             cHhHHHHHHHHHHHhHhhHHHHH
Confidence            98 88888899999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=1.4e-47  Score=348.12  Aligned_cols=241  Identities=35%  Similarity=0.525  Sum_probs=218.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHH
Q 024538           19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI   98 (266)
Q Consensus        19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~   98 (266)
                      +++|++|++++|+.||++||++++++++.     ++|.+++++|++++.+.+.+.....+.+.+++.|+++|++.++++.
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~-----~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGS-----PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF   75 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCC-----cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH
Confidence            46899999999999999999999987641     7999999999999999998887666644567899999999999999


Q ss_pred             HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchh
Q 024538           99 LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVW  178 (266)
Q Consensus        99 ~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~  178 (266)
                      .++.++|.||+|+|+|+|+++||||++|||+++++++||||+++||++++++++|+++++++|.++++++ +.+......
T Consensus        76 ~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~-~~~~~~~~~  154 (303)
T PF08449_consen   76 LASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS-NSSSFSSAL  154 (303)
T ss_pred             HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc-ccccccchh
Confidence            9999999999999999999999999999999999999999999999999999999999999975433211 111223345


Q ss_pred             hHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHh--hCcHHHHHHHHHhChHHHHHHHHHHHh
Q 024538          179 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTV  256 (266)
Q Consensus       179 G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~--~g~~~~~~~f~~~~p~~~~~~~~~s~~  256 (266)
                      |++++++|+++||+++++|||++++|+.+++|+|+|+|++++++.++.++.  +||+.++++|+.+||+.+.+++.++++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998888  999999999999999999999999999


Q ss_pred             hhhhhhhhc
Q 024538          257 SDLCFIIIA  265 (266)
Q Consensus       257 ~a~Gq~~i~  265 (266)
                      +++||.++.
T Consensus       235 ~~~g~~~i~  243 (303)
T PF08449_consen  235 GALGQFFIF  243 (303)
T ss_pred             HHHHHHHHH
Confidence            999999874

; GO: 0055085 transmembrane transport

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3e-29  Score=218.78  Aligned_cols=210  Identities=20%  Similarity=0.300  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHH
Q 024538           19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI   98 (266)
Q Consensus        19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~   98 (266)
                      -+..+.++++++...-+.-|.+.+++.+       ....+||+|+++.++.+++...... ..+|++|+|.|++....++
T Consensus         4 a~~ai~~vf~GCcsnvv~lE~L~~~~pg-------sgNLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~mFF   75 (330)
T KOG1583|consen    4 AAAAISLVFGGCCSNVVFLELLVRNEPG-------SGNLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVAMFF   75 (330)
T ss_pred             HHHHHHHHHHhhhchHHHHHHHHHhCCC-------CeeehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehheee
Confidence            3456788999999999999999987644       3357899999999988877653222 2458899999999999999


Q ss_pred             HHHHHhHHhhhc-CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC-----C-
Q 024538           99 LTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS-----K-  171 (266)
Q Consensus        99 ~a~~~~n~aL~y-vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~-----~-  171 (266)
                      ..++++|.|++| +|+|.|+++||..++.+|++|+++.||||+.+||.+++++|+|++++++.+++ |...+.     + 
T Consensus        76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~~~  154 (330)
T KOG1583|consen   76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDSGS  154 (330)
T ss_pred             eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhcccccCc
Confidence            999999999997 99999999999999999999999999999999999999999999999998643 222211     1 


Q ss_pred             C-Cc--cchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHH
Q 024538          172 G-RE--NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV  240 (266)
Q Consensus       172 ~-~~--~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~  240 (266)
                      + .+  ...+|+.++..++++++..+.+||+++++||.+|.|.|||+|+.++++-+   +.-+|..+.+.-.
T Consensus       155 ~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~  223 (330)
T KOG1583|consen  155 AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLA  223 (330)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHH
Confidence            1 11  22469999999999999999999999999999999999999998776543   3445555554443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.85  E-value=2e-20  Score=165.79  Aligned_cols=199  Identities=15%  Similarity=0.211  Sum_probs=162.0

Q ss_pred             ceeehHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCcchhHH----HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcc
Q 024538           51 YFKYSLFLVFCNRLMTSAVSAGTLIASRKAI---DPVAPVYKY----CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAK  123 (266)
Q Consensus        51 ~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~---~~~~p~~~y----~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k  123 (266)
                      .|+||.|++.+|.+.-.++|.+....++.+.   +.+..|+.|    +|++++..++..++|++++|++.+.+++.||+.
T Consensus        41 ~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   41 NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccH
Confidence            4999999999999999999888766544221   223445444    599999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHcc
Q 024538          124 MIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKG  203 (266)
Q Consensus       124 ~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~  203 (266)
                      ++++.+++.++.-+|++|.-.+.+.+|.+|+++|++.+           .+++..|..++.+|.++.|+++.+.+.++++
T Consensus       121 i~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~  189 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRN  189 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----------cceeehhHHHHHHHHHhhhhhHHHHHHHHhc
Confidence            99999999999999999999999999999999999872           3689999999999999999999999999998


Q ss_pred             CC---CChhhHHHHhhHHHHHHHHH-HHHhhCcHHH-HHHHH--HhChHHHHHHHHHHHhhhhh
Q 024538          204 YD---MEIHNQIFYTTLCSCVLSLS-GLILEGHLFL-AIDFV--YHHLDCFFDVALLSTVSDLC  260 (266)
Q Consensus       204 ~~---~~~~e~m~~~n~~~~~~~~~-~~~~~g~~~~-~~~f~--~~~p~~~~~~~~~s~~~a~G  260 (266)
                      ++   .+|.++|++..+|..+..++ .+.+||-... .-+..  +++-++++.+..+++++.+.
T Consensus       190 ~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la  253 (349)
T KOG1443|consen  190 QPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA  253 (349)
T ss_pred             CccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence            75   57999999999999988876 5677872221 11222  22323555555566666543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.80  E-value=7e-18  Score=154.74  Aligned_cols=221  Identities=18%  Similarity=0.181  Sum_probs=168.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcC----CCCCcchhHH
Q 024538           15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAPVYKY   90 (266)
Q Consensus        15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~----~~~~~p~~~y   90 (266)
                      |.+.+++|.+|+..+++...                +++.|.+=++.+.+.-.++=...+.+|+..    ...+.|+++|
T Consensus        19 Q~lsl~~~~t~~~s~~l~~~----------------~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y   82 (334)
T PF06027_consen   19 QVLSLCITGTGTFSSLLANK----------------GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKY   82 (334)
T ss_pred             HHHHHHHHhHHHHHHHHHhc----------------CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHH
Confidence            55677777777777665422                344665555554433332211222233321    1125788999


Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  170 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~  170 (266)
                      +.+|++++.++++.+.|++|.|....++..+...+.+|+++++++|+||++.|++++++...|+++...+|..+.  +++
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~  160 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDS  160 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccC
Confidence            999999999999999999999999999999998888999999999999999999999999999999998875321  111


Q ss_pred             CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHH-HhhCcHHHHHHHHHhChHHHHH
Q 024538          171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGL-ILEGHLFLAIDFVYHHLDCFFD  249 (266)
Q Consensus       171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~-~~~g~~~~~~~f~~~~p~~~~~  249 (266)
                      ++.++...|.++++++..+.|+.++.||++.|++  +..|.+...++|+++++.+.+ ++|.+-   ++-+.++++....
T Consensus       161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~~---i~~~~w~~~~~~~  235 (334)
T PF06027_consen  161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERSG---IESIHWTSQVIGL  235 (334)
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehhh---hhccCCChhhHHH
Confidence            2346789999999999999999999999999976  468999999999999998765 455443   3334678888887


Q ss_pred             HHHHHHhhh
Q 024538          250 VALLSTVSD  258 (266)
Q Consensus       250 ~~~~s~~~a  258 (266)
                      ++.+++|-.
T Consensus       236 ~v~~~~~lf  244 (334)
T PF06027_consen  236 LVGYALCLF  244 (334)
T ss_pred             HHHHHHHHH
Confidence            777777644

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.75  E-value=6.1e-16  Score=140.24  Aligned_cols=194  Identities=11%  Similarity=0.038  Sum_probs=156.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh--hhcCCCCCcchhHHHHHHHH
Q 024538           19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDPVAPVYKYCLVSMS   96 (266)
Q Consensus        19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~--~~~~~~~~~p~~~y~~~s~~   96 (266)
                      ....+.-.|..-..+.+++.++.+        .|++|.++++.|+..+++...+....  +++..-++..+++.++.+++
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~--------~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   74 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLN--------VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIV   74 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence            344556667777777777877763        37899999999998887765444211  11111122346678999999


Q ss_pred             HHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccc
Q 024538           97 NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT  176 (266)
Q Consensus        97 ~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~  176 (266)
                      ......++|.+++|+|.+..++.|+..|+.+++++++++|||+++++++++++..+|+++....    +       .+++
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~-------~~~~  143 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E-------LSFN  143 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c-------cccc
Confidence            9999999999999999999999999999999999999999999999999999999999875422    1       2345


Q ss_pred             hhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhC
Q 024538          177 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG  231 (266)
Q Consensus       177 ~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g  231 (266)
                      ..|.++.+++.++-++...+.+|..++++.++.+...|.+.++.+..++.....+
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~  198 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITE  198 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence            7899999999999999999999998866778899999999999988888766544

specificities overlap.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=7.8e-17  Score=142.43  Aligned_cols=146  Identities=17%  Similarity=0.291  Sum_probs=127.6

Q ss_pred             cchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCC
Q 024538           85 APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA  164 (266)
Q Consensus        85 ~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~  164 (266)
                      ....+++++|++|...+.+.+.+++|++.+++++.+.+|++.+.+++++++|||.+.+||++.+++++|+++...++..+
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            34678999999999999999999999999999999999999999999999999999999999999999999999886543


Q ss_pred             CCCCCCC------CCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhh
Q 024538          165 DLSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILE  230 (266)
Q Consensus       165 ~~~~~~~------~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~  230 (266)
                      ++.++++      +..+...|+++++++.+++|+.+++.||++|+.+.+.+.+......+|.++.++.....
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~  166 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS  166 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            2111111      12456789999999999999999999999999998989999999999999998876443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=2.1e-17  Score=150.07  Aligned_cols=201  Identities=17%  Similarity=0.193  Sum_probs=165.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhh----cCCCCCcchhHH
Q 024538           15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR----KAIDPVAPVYKY   90 (266)
Q Consensus        15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~----~~~~~~~p~~~y   90 (266)
                      +.....++..-.+++...+..+..++... |     .|+||.+++.+|...+.+.. ...+..+    ++.+++.++++.
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~-~-----~f~~p~~lt~~~~~~~~l~~-~v~~~l~~~~~~~~~~~~~~~~l   86 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSK-Y-----GFPFPITLTMLHLFCGALAL-LVIKVLKLVPPSKISSKLPLRTL   86 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhcc-C-----CCCCccHHHHHHHHHHHHHH-HHHHHhcCCCCCccccccchHHH
Confidence            44555555666666666666666776643 3     59999999999776665443 3333322    222345789999


Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  170 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~  170 (266)
                      +++|+.+..+.+++|.|++|+|+++.++.|+..|+.+.++++++.+|+|+++.|++.+.++.||++.+..|         
T Consensus        87 lpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e---------  157 (316)
T KOG1441|consen   87 LPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE---------  157 (316)
T ss_pred             HHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc---------
Confidence            99999999999999999999999999999999999999999999999999999999999999999998862         


Q ss_pred             CCCccchhhHHHHHHHHHHhHhHHHHHHHHH--ccCCCChhhHHHHhhHHHHHHHH-HHHHh-hCcH
Q 024538          171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLF--KGYDMEIHNQIFYTTLCSCVLSL-SGLIL-EGHL  233 (266)
Q Consensus       171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~--~~~~~~~~e~m~~~n~~~~~~~~-~~~~~-~g~~  233 (266)
                        .+++++|.+..+.+.+..+.++.++++++  |+++.++.+++.|+.+.+.++.+ |.... +|+.
T Consensus       158 --~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~  222 (316)
T KOG1441|consen  158 --LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK  222 (316)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc
Confidence              37899999999999999999999999999  46789999999999999999998 75543 4443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.73  E-value=3.3e-15  Score=138.63  Aligned_cols=198  Identities=11%  Similarity=0.063  Sum_probs=162.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCcchhHH
Q 024538           15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID----PVAPVYKY   90 (266)
Q Consensus        15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~----~~~p~~~y   90 (266)
                      +.++....+...|..-..+.+.+.++.+        .++||++++.+|++.+++...+......++.+    ++..+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~--------~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  117 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALN--------MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNF  117 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            3688999999999999999888888874        36799999999999998776544322111111    12245678


Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  170 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~  170 (266)
                      +++++++......+|.|+++++.+..++.|++.|+.+++++++++|||++++++++++++++|+++...++         
T Consensus       118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~---------  188 (350)
T PTZ00343        118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE---------  188 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc---------
Confidence            99999999988889999999999999999999999999999999999999999999999999999987541         


Q ss_pred             CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCC-----CChhhHHHHhhHHHHHHHHHHHH-hhC
Q 024538          171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEG  231 (266)
Q Consensus       171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~-----~~~~e~m~~~n~~~~~~~~~~~~-~~g  231 (266)
                        .++++.|+++.++|.++.++++.+.++++++++     .++.+...+..+++.+++++... .|+
T Consensus       189 --~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~  253 (350)
T PTZ00343        189 --LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG  253 (350)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence              245688999999999999999999999988653     55666777778899999888665 443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.72  E-value=6.2e-16  Score=138.57  Aligned_cols=194  Identities=18%  Similarity=0.164  Sum_probs=157.5

Q ss_pred             ceeehHHHHHHHHHHHHHHHHHHHHhhh-cCCCC--CcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHH
Q 024538           51 YFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDP--VAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPV  127 (266)
Q Consensus        51 ~F~~~~fL~~~q~~~~~l~~~~~~~~~~-~~~~~--~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipv  127 (266)
                      +|+-..++.+.|.+.+++.-+. .+..| .+.|+  ....|+|.|+++.+.++.+.+..+++|+|+|+.+++|+..++-+
T Consensus        39 ~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~  117 (314)
T KOG1444|consen   39 NFPMGLLLMLLQSLASVLVVLV-LKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILT  117 (314)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHH-HHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHH
Confidence            3445555555999877655332 22222 12221  34568999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCC
Q 024538          128 MIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME  207 (266)
Q Consensus       128 mi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~  207 (266)
                      ++.+.+++|||+++..|.++..+..|.......|           .+++..|+.++..+++..+....+-+|-.+.-+.+
T Consensus       118 ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d-----------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~  186 (314)
T KOG1444|consen  118 AIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD-----------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLN  186 (314)
T ss_pred             HHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc-----------ceecchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9999999999999999999999999988776553           25667799999999999999999999999988889


Q ss_pred             hhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHH---hChHHHHHHHHHHHhh
Q 024538          208 IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY---HHLDCFFDVALLSTVS  257 (266)
Q Consensus       208 ~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~---~~p~~~~~~~~~s~~~  257 (266)
                      .+++|+|.|+++++......+.+||+. ++.+..   .+|.++..+..-+++|
T Consensus       187 ~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~g  238 (314)
T KOG1444|consen  187 KFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMG  238 (314)
T ss_pred             ceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHH
Confidence            999999999999999999889999988 666653   3455666555545444

>TIGR00803 nst UDP-galactose transporter

Probab=99.59  E-value=5.2e-15  Score=128.57  Aligned_cols=152  Identities=18%  Similarity=0.194  Sum_probs=113.5

Q ss_pred             CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCC-------------C-CCCC--CCCCc
Q 024538          111 VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGA-------------D-LSPY--SKGRE  174 (266)
Q Consensus       111 vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~-------------~-~~~~--~~~~~  174 (266)
                      +++|.++.+|+++++|+|+.++...+|||+..||+++++++.|+....++|.+.             + ++..  .....
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            689999999999999999999999999999999999999999999877764311             0 0000  00123


Q ss_pred             cchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHh-hCcHHHHHHHHHhChHHHHHHHHH
Q 024538          175 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL-EGHLFLAIDFVYHHLDCFFDVALL  253 (266)
Q Consensus       175 ~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~-~g~~~~~~~f~~~~p~~~~~~~~~  253 (266)
                      +.+.|..+++.++++||+.+++||+.+|+++.+.++.++.+.+++.+........ .++......|..+||...+.+.  
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  159 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG--  159 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH--
Confidence            5678999999999999999999999988776555555555566665544443333 2455555566678888777554  


Q ss_pred             HHhhhhhhhhhc
Q 024538          254 STVSDLCFIIIA  265 (266)
Q Consensus       254 s~~~a~Gq~~i~  265 (266)
                       +++++||++|.
T Consensus       160 -~~~a~~~~~v~  170 (222)
T TIGR00803       160 -LLNVGGGLCIG  170 (222)
T ss_pred             -HHHHhcCceee
Confidence             57888988764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.52  E-value=8.1e-14  Score=119.24  Aligned_cols=209  Identities=16%  Similarity=0.091  Sum_probs=153.3

Q ss_pred             cCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhh
Q 024538           43 VPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC  121 (266)
Q Consensus        43 ~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~-~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS  121 (266)
                      ++|.-+..+|+-...+.+.|.+.+.+ +.+.++.-| .+. |....++|.+++++.+...+.+.+||+|+++|.++++|.
T Consensus        25 NKyVls~~gfnMnflll~vQSlvcvv-~l~iLk~l~~~~f-R~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKN  102 (309)
T COG5070          25 NKYVLSNLGFNMNFLLLAVQSLVCVV-GLLILKFLRLVEF-RLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKN  102 (309)
T ss_pred             hHheecCCCCchhhHHHHHHHHHHHH-HHHHHHHHhHhhe-ehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhcc
Confidence            34433445788888899999887654 444443333 222 245678999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538          122 AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF  201 (266)
Q Consensus       122 ~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~  201 (266)
                      .++|.+..+..+++|+|.+..+..+.++|+..-...+.+|.... .-+   ...---|+.++..+++-++......++..
T Consensus       103 ltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~-~~~---~~~lN~GY~Wm~~NclssaafVL~mrkri  178 (309)
T COG5070         103 LTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS-AFK---AQILNPGYLWMFTNCLSSAAFVLIMRKRI  178 (309)
T ss_pred             ceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH-HHH---hcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence            99999999999999999999999999999999998888763211 001   11222499999999999888877777666


Q ss_pred             ccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh
Q 024538          202 KGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS  257 (266)
Q Consensus       202 ~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~  257 (266)
                      |-.+...+|.|||.|+.++++.....+..+|..+.=---.-.|+.+..++.-++|+
T Consensus       179 ~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         179 KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            65555679999999999999988766555444332000012345555555444443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.51  E-value=5e-12  Score=115.04  Aligned_cols=175  Identities=15%  Similarity=0.253  Sum_probs=143.6

Q ss_pred             hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCC
Q 024538           87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADL  166 (266)
Q Consensus        87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~  166 (266)
                      ..+..++|+.|...+-+.+.++.|+|-.++++.-.-|+..+.++.+++++||.+++||.+.+++++|+++..+...++..
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999955332221


Q ss_pred             CCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhC-cHHHHHHHHHhChH
Q 024538          167 SPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHLD  245 (266)
Q Consensus       167 ~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g-~~~~~~~f~~~~p~  245 (266)
                      +.....+.+...|...++.+++.+|+.+++-||++|+-+.+.+-+...++.+|.++.+..+..++ +-...-.|++.|-.
T Consensus       172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~  251 (345)
T KOG2234|consen  172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSS  251 (345)
T ss_pred             ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccH
Confidence            11112246889999999999999999999999999998889888889999999999998876553 22222456777777


Q ss_pred             HHHHHHHHHHhhhhhhhhh
Q 024538          246 CFFDVALLSTVSDLCFIII  264 (266)
Q Consensus       246 ~~~~~~~~s~~~a~Gq~~i  264 (266)
                      ..|.+..   -.|+|.+.+
T Consensus       252 ~vw~vVl---~~a~gGLlv  267 (345)
T KOG2234|consen  252 IVWLVVL---LNAVGGLLV  267 (345)
T ss_pred             HHHHHHH---HHhccchhH
Confidence            7665544   555555544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.20  E-value=1.2e-12  Score=114.05  Aligned_cols=210  Identities=16%  Similarity=0.208  Sum_probs=152.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHH
Q 024538           14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLV   93 (266)
Q Consensus        14 ~~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~   93 (266)
                      +|.+++++|..+...+++.     ||           .-+-|.+=+|.+-..-+++=..++..|++  .-+..+++|...
T Consensus        23 GQiLSL~~t~~a~tss~la-----~k-----------~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~--~~~~~~~hYill   84 (336)
T KOG2766|consen   23 GQILSLLITSTAFTSSELA-----RK-----------GINAPTSQTFLNYVLLALVYGPIMLFRRK--YIKAKWRHYILL   84 (336)
T ss_pred             HHHHHHHHHcchhhhHHHH-----hc-----------cCCCccHHHHHHHHHHHHHHhhHHHhhhH--HHHHHHHHhhhe
Confidence            4667788887777666553     22           12234333333322222221122334442  224678899999


Q ss_pred             HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCC
Q 024538           94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGR  173 (266)
Q Consensus        94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~  173 (266)
                      ++.++.++++--.|++|.+....++.-|--..-|++.+|++++.||.+.|+.+|+.+.+|+++...+|-...   +..+.
T Consensus        85 a~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag---d~agg  161 (336)
T KOG2766|consen   85 AFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG---DRAGG  161 (336)
T ss_pred             eEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc---cccCC
Confidence            999999999999999999999888876655555999999999999999999999999999999888863221   11124


Q ss_pred             ccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHH
Q 024538          174 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD  249 (266)
Q Consensus       174 ~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~  249 (266)
                      ++...|.+++++..-|.|+.++.||.+.|+  .+..|+|-..++++.+++.+..+.+..-...+   +++.++...
T Consensus       162 snp~~GD~lvi~GATlYaVSNv~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl---~w~~~i~~y  232 (336)
T KOG2766|consen  162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKN--ADRVELMGFLGLFGAIISAIQFIFERHHVSTL---HWDSAIFLY  232 (336)
T ss_pred             CCCccCcEEEEecceeeeeccccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHhhhccceeeE---eehHHHHHH
Confidence            678899999999999999999999999995  56899999999999999999987776443333   444444433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.20  E-value=1.5e-09  Score=96.10  Aligned_cols=169  Identities=15%  Similarity=0.159  Sum_probs=138.0

Q ss_pred             chh--HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538           86 PVY--KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  163 (266)
Q Consensus        86 p~~--~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~  163 (266)
                      |++  .+.++++++..++.+-|.+|.+.+-+..|+.|-+-+|+|-+++.-+++|+...+||++...+.+|+++....|-.
T Consensus        83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~  162 (372)
T KOG3912|consen   83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVH  162 (372)
T ss_pred             CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecc
Confidence            554  467899999999999999999999999999999999999999999999999999999999999999999887543


Q ss_pred             CCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHH-HHHh-------------
Q 024538          164 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLS-GLIL-------------  229 (266)
Q Consensus       164 ~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~-~~~~-------------  229 (266)
                      .++.+-+ +-++...|..+++.+-+.-|++-+++||.+++++.+|.+..-|-..+++++.-. ...+             
T Consensus       163 ~~~~p~~-d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~  241 (372)
T KOG3912|consen  163 LVTDPYT-DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNP  241 (372)
T ss_pred             cccCCcc-ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCC
Confidence            2221211 125667899999999999999999999999999999999999999999765433 2211             


Q ss_pred             hC---cHHHHHHHHHhChHHHHHHHHHHH
Q 024538          230 EG---HLFLAIDFVYHHLDCFFDVALLST  255 (266)
Q Consensus       230 ~g---~~~~~~~f~~~~p~~~~~~~~~s~  255 (266)
                      .|   |...++.-+.+.|.....+.++.+
T Consensus       242 ~g~~eD~~~~~~~~~e~p~l~val~~~~v  270 (372)
T KOG3912|consen  242 RGVLEDWGDAFAALQESPSLAVALIGFTV  270 (372)
T ss_pred             CcchhhHHHHHHHhcCCchhHHHHhhhhh
Confidence            22   555566667888887665555433

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.12  E-value=1.3e-10  Score=102.42  Aligned_cols=200  Identities=18%  Similarity=0.149  Sum_probs=152.4

Q ss_pred             CceeehHHHHHHHHHHHHHHHHHHHHhhhc----CCCCC-----cchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHh
Q 024538           50 EYFKYSLFLVFCNRLMTSAVSAGTLIASRK----AIDPV-----APVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAK  120 (266)
Q Consensus        50 ~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~----~~~~~-----~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~K  120 (266)
                      ....-|.|.+++|++.+..+........++    ..-|.     ...++..+.++.+.....++|..|+|++++++.+.|
T Consensus        56 ~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgR  135 (347)
T KOG1442|consen   56 VILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGR  135 (347)
T ss_pred             hhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEecc
Confidence            456789999999999887776554332221    11111     234678999999999999999999999999999999


Q ss_pred             hcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHH
Q 024538          121 CAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL  200 (266)
Q Consensus       121 S~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~  200 (266)
                      |...+++.+..++++|+|-+..-..++.+|..|-   .++-   |.+..  ++..++.|++.-+.|.++-|+-..+..|.
T Consensus       136 sLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF---~lGv---dqE~~--~~~ls~~GvifGVlaSl~vAlnaiytkk~  207 (347)
T KOG1442|consen  136 SLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGF---GLGV---DQEGS--TGTLSWIGVIFGVLASLAVALNAIYTKKV  207 (347)
T ss_pred             chhhhHHHHhHHhhcccccccccceeehhheehh---eecc---ccccc--cCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence            9999999999999999999999888888888774   3342   21111  24678899999999999999998888766


Q ss_pred             HccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHh-ChHHHHHHHHHHHhh
Q 024538          201 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFDVALLSTVS  257 (266)
Q Consensus       201 ~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~-~p~~~~~~~~~s~~~  257 (266)
                      .-.-+-..+.+-+|+|..++++.+|.++++||+.+-+.|.+. .-.++..+.+-+++|
T Consensus       208 l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfg  265 (347)
T KOG1442|consen  208 LPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFG  265 (347)
T ss_pred             cccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHH
Confidence            554455578888999999999999999999999987766533 333333333334443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.04  E-value=4.1e-08  Score=86.46  Aligned_cols=189  Identities=15%  Similarity=0.073  Sum_probs=131.4

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHH-HHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH
Q 024538           54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM-SNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT  132 (266)
Q Consensus        54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~-~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~  132 (266)
                      -+..+.+...+.+.+.-.+.. .++   +++.+++.+...+. .......+-+.|++|+|...-.+..+..|+.+++.+.
T Consensus        17 ~~~~~~~~r~~~~~l~l~~~~-~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~   92 (260)
T TIGR00950        17 PLYFAVFRRLIFALLLLLPLL-RRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSD   92 (260)
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-Hhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHH
Confidence            344455555555544332222 222   23334455666654 4577888999999999999999999999999999999


Q ss_pred             HHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHH
Q 024538          133 LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI  212 (266)
Q Consensus       133 l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m  212 (266)
                      ++.|+|.+++++.++.+..+|+.+....+   +       .+.+..|+.+.+.+.++-+..+..+.+..++++.++....
T Consensus        93 l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~  162 (260)
T TIGR00950        93 LMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFT  162 (260)
T ss_pred             HHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHH
Confidence            99999999999999999999998865331   1       1345689999999999999999999999887766555555


Q ss_pred             HHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh-hhhhh
Q 024538          213 FYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS-DLCFI  262 (266)
Q Consensus       213 ~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~-a~Gq~  262 (266)
                      .+...++.++..+.....++...      .++..+..++..++.+ .+|+.
T Consensus       163 ~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  207 (260)
T TIGR00950       163 GWVLLLGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYF  207 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHH
Confidence            45677777777766555543221      1344444455455443 44544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.72  E-value=6.6e-06  Score=74.36  Aligned_cols=186  Identities=12%  Similarity=0.099  Sum_probs=120.6

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHH-HHHHHHhHHhh-hcCChhHHHHHhhcchHHHHHHH
Q 024538           54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILTTTCQYEAL-KYVSFPVQTLAKCAKMIPVMIWG  131 (266)
Q Consensus        54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~-~~a~~~~n~aL-~yvs~p~~~l~KS~k~ipvmi~~  131 (266)
                      -|..+++..++.+.++-.+....+|++.+++..+++....+.+. .....+-+.+. ++++...-.+.=+..|+.+++++
T Consensus        35 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla  114 (292)
T PRK11272         35 PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFS  114 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence            45667777777776665554444443222333445556666654 45677778888 89999888888888999999999


Q ss_pred             HHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhH
Q 024538          132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQ  211 (266)
Q Consensus       132 ~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~  211 (266)
                      .+ .|||.+++++.++++-.+|+.+...++   +       .+.+..|..+.+.+.++-|..+..++|.-+++   +...
T Consensus       115 ~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~-------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~---~~~~  180 (292)
T PRK11272        115 RL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---N-------LSGNPWGAILILIASASWAFGSVWSSRLPLPV---GMMA  180 (292)
T ss_pred             HH-hcccCchhHHHHHHHHHHhHHHHhcCc---c-------cccchHHHHHHHHHHHHHHHHHHHHHhcCCCc---chHH
Confidence            86 699999999999999999998865331   1       12345799999999999999999998764322   2223


Q ss_pred             HHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhh
Q 024538          212 IFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVS  257 (266)
Q Consensus       212 m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~  257 (266)
                      ..+....+.+...+.....++...    ...+++.+..++..++.+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        181 GAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHH
Confidence            334444454444443333332110    012444455555555543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.66  E-value=1.3e-05  Score=74.84  Aligned_cols=183  Identities=13%  Similarity=0.092  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCcch---hHHH
Q 024538           16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPV---YKYC   91 (266)
Q Consensus        16 ~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~-~~~~~~p~---~~y~   91 (266)
                      ..+.......+..+|..+..+-....+.-.        .|..+.+.-+..+.++-.+....+++ +..++.++   .++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~--------~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~   82 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGL--------NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIG   82 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCC--------CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence            444445555566666666554444444321        11224455555554443333323221 22232333   3456


Q ss_pred             HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHH------hccccChhhHHHHHHHHHhhHHhhccCCCCC
Q 024538           92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFPSGAD  165 (266)
Q Consensus        92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~------~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~  165 (266)
                      ..+++......+.+.+++|+|-..-.+.=+..|+.+++++.++      +++|.++++++++++-.+|+.+....+....
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccc
Confidence            6666654555689999999999999999999999999999999      5999999999999999999987664321100


Q ss_pred             -C----------CCC--C-CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC
Q 024538          166 -L----------SPY--S-KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM  206 (266)
Q Consensus       166 -~----------~~~--~-~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~  206 (266)
                       .          +..  . .+..+..+|.++++.+.++-++....|++..++|..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~  217 (358)
T PLN00411        163 FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA  217 (358)
T ss_pred             ccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence             0          000  0 011223669999999999999999999999888754

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.65  E-value=1.3e-05  Score=72.75  Aligned_cols=194  Identities=14%  Similarity=0.178  Sum_probs=116.7

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHH-HHHHHHhHHhhhc-CChhHHHHHhhcchHHHHHHH
Q 024538           54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSN-ILTTTCQYEALKY-VSFPVQTLAKCAKMIPVMIWG  131 (266)
Q Consensus        54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~-~~a~~~~n~aL~y-vs~p~~~l~KS~k~ipvmi~~  131 (266)
                      .|..+++..+..+.+...+..  ++    ++.+++.....++.. .....+.+.+++| ++-..-.+.-++.|+.+++++
T Consensus        31 ~p~~~~~~R~~~a~~~l~~~~--~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~  104 (299)
T PRK11453         31 PPLMLAGLRFMLVAFPAIFFV--AR----PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLG  104 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh--cC----CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHH
Confidence            366666666655443322221  22    123344444444433 3344466778887 777666666778899999999


Q ss_pred             HHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC-Chhh
Q 024538          132 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHN  210 (266)
Q Consensus       132 ~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~-~~~e  210 (266)
                      ++++|+|.+.++++++++..+|+.+....+.  +      +.+.+..|+.+.+.+.++-+.....++|..++++. ....
T Consensus       105 ~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~  176 (299)
T PRK11453        105 AFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMS  176 (299)
T ss_pred             HHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhH
Confidence            9999999999999999999999988764311  1      11334679999999999999999999998765432 2222


Q ss_pred             HHHHhhHHHHHHHH-HHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhh
Q 024538          211 QIFYTTLCSCVLSL-SGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCF  261 (266)
Q Consensus       211 ~m~~~n~~~~~~~~-~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq  261 (266)
                      ..++....+.+... .....+++......+...+++.+..++..++.+...+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~  228 (299)
T PRK11453        177 LVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVG  228 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence            23333333222222 1222344322111222345666666666655544433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.48  E-value=1.7e-05  Score=71.84  Aligned_cols=197  Identities=9%  Similarity=-0.049  Sum_probs=115.9

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcC----ChhHHHHHhhcchHHHHH
Q 024538           54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYV----SFPVQTLAKCAKMIPVMI  129 (266)
Q Consensus        54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yv----s~p~~~l~KS~k~ipvmi  129 (266)
                      -|..+.+.-+..+.++-....  ++++ .++.+.+....-++.......+.+.+++|.    +-..-.+.-+..|+.+++
T Consensus        31 ~P~~~~~~R~~~a~l~l~~~~--~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~l  107 (295)
T PRK11689         31 GPVGGAAMIYSVSGLLLLLTV--GFPR-LRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTIL  107 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHc--cccc-cccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHH
Confidence            355566666555544432221  1211 122333333444455556666777777764    333334556678999999


Q ss_pred             HHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChh
Q 024538          130 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIH  209 (266)
Q Consensus       130 ~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~  209 (266)
                      +++++.|+|.++++++++++-.+|+++....+.+.+..+...+..++..|.++.+.+.++-+..+.+.+|..++++  +.
T Consensus       108 l~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~--~~  185 (295)
T PRK11689        108 FAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN--GI  185 (295)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC--ch
Confidence            9999999999999999999999999887654311000000001123467999999999999999999999866554  33


Q ss_pred             hHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhhhh
Q 024538          210 NQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFII  263 (266)
Q Consensus       210 e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq~~  263 (266)
                      ...+   ..+.+...+....+++..     ...+++.+..++..++++.+++++
T Consensus       186 ~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l  231 (295)
T PRK11689        186 TLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAA  231 (295)
T ss_pred             hHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3322   122222222222333221     134566666666666667666654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.40  E-value=3.4e-06  Score=77.63  Aligned_cols=135  Identities=12%  Similarity=0.087  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  170 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~  170 (266)
                      +....+-+.++...|.||.|-++...++.-|..-.++..++.++.+.|+++.|.++|++-..|+++.+.+|+..+   ++
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~---~~  239 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN---SD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc---cc
Confidence            344566788999999999999999999999999999999999999999999999999999999999999865321   11


Q ss_pred             CCCccchhhHHHHHHHHHHhHhHHHHHHHHHccC--CCChhhHHHHhhHHHHHHHHHHHH
Q 024538          171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DMEIHNQIFYTTLCSCVLSLSGLI  228 (266)
Q Consensus       171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~--~~~~~e~m~~~n~~~~~~~~~~~~  228 (266)
                      ..+++.+.|.++.+++.++.|.+.+.-.|-..++  +.+...+.-|+++|.+++.-|.++
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~  299 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI  299 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence            1246778999999999999999998887766665  566666667899999888876553

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.40  E-value=0.00017  Score=63.61  Aligned_cols=104  Identities=18%  Similarity=0.165  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH-HHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCC
Q 024538           90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT-LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP  168 (266)
Q Consensus        90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~-l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~  168 (266)
                      .....+.......+-+.+++|++.+..++..++.|+.+.+++. +++++|.+++++.+.++...|+.+....+..++   
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~---  149 (292)
T COG0697          73 LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG---  149 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch---
Confidence            4455666677778888889999999999999999999999996 777999999999999999999998876532100   


Q ss_pred             CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538          169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF  201 (266)
Q Consensus       169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~  201 (266)
                          +. ...|..+.+.+.++.++....++++.
T Consensus       150 ----~~-~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         150 ----IL-SLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             ----hH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                11 57899999999999999999999888

>TIGR00688 rarD rarD protein

Probab=98.39  E-value=4.7e-05  Score=67.28  Aligned_cols=134  Identities=10%  Similarity=-0.007  Sum_probs=95.1

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHhhhcC------CCC--Ccc-hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcch
Q 024538           54 YSLFLVFCNRLMTSAVSAGTLIASRKA------IDP--VAP-VYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKM  124 (266)
Q Consensus        54 ~~~fL~~~q~~~~~l~~~~~~~~~~~~------~~~--~~p-~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~  124 (266)
                      -|..+++..++.+.+.-.+....++++      .++  +.. +......++.......+-+.|++|+|...-.+.-.+.|
T Consensus        28 ~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P  107 (256)
T TIGR00688        28 PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINP  107 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence            455677777777664433333222211      011  111 12345667778888999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHc
Q 024538          125 IPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK  202 (266)
Q Consensus       125 ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~  202 (266)
                      +.+++++.+++|||.++++++++++-.+|+++....+  +         +..    .+.+++.++-+.....+++..+
T Consensus       108 i~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~--~---------~~~----~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       108 LVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK--G---------SLP----WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc--C---------Cch----HHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999999999999999999999998765331  0         111    2356677888888888877644

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.33  E-value=0.00017  Score=65.24  Aligned_cols=132  Identities=8%  Similarity=0.015  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhcCCC--C-CcchhH---HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHH
Q 024538           55 SLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYK---YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVM  128 (266)
Q Consensus        55 ~~fL~~~q~~~~~l~~~~~~~~~~~~~~--~-~~p~~~---y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvm  128 (266)
                      |.-+.+.+.+.+.++-......+++..+  + ....++   ...-++.......+-+.+++|+|...-.+.-.+.|+.++
T Consensus        35 ~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~  114 (296)
T PRK15430         35 ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNI  114 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            5567777777765543333323221100  0 011122   233455667789999999999999999999999999999


Q ss_pred             HHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHH
Q 024538          129 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF  201 (266)
Q Consensus       129 i~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~  201 (266)
                      +++++++|||.++++++++++-.+|+++....+  +         +..    .+.+.+.++-|+....+++..
T Consensus       115 l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~--~---------~~~----~~~l~aa~~~a~~~i~~r~~~  172 (296)
T PRK15430        115 VLGMIFLGERFRRMQWLAVILAICGVLVQLWTF--G---------SLP----IIALGLAFSFAFYGLVRKKIA  172 (296)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc--C---------Ccc----HHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999865321  0         111    245556778888888887653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.32  E-value=7.8e-06  Score=63.59  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=66.6

Q ss_pred             cchhHHHHHHHHHH-HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538           85 APVYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  162 (266)
Q Consensus        85 ~p~~~y~~~s~~~~-~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~  162 (266)
                      .|+......+.... .+..+-+.|++|.+ +...+..+..|+.+++++++++|+|.+++++++++++++|+++..++|.
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            44444455566654 88999999999999 6777889999999999999999999999999999999999999988854

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.28  E-value=0.00041  Score=62.73  Aligned_cols=184  Identities=9%  Similarity=-0.011  Sum_probs=110.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHH
Q 024538           55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLI  134 (266)
Q Consensus        55 ~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~  134 (266)
                      |..+.+..++.+.+.-.+....++++ .++..++.....+++......+.+.+++|+|...-.+.-.+.|+.+++++   
T Consensus        40 ~~~~~~~R~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~---  115 (293)
T PRK10532         40 APGVTALRLALGTLILIAIFKPWRLR-FAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS---  115 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh---
Confidence            34467777777655443332222221 12233445567777788888999999999999988887877787777665   


Q ss_pred             hccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHH
Q 024538          135 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY  214 (266)
Q Consensus       135 ~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~  214 (266)
                       +||....+  .+.+..+|+.+....+.  +.      .+.+..|.++.+.+.++-+......+|..++++.  ... .+
T Consensus       116 -~~~~~~~~--~~~i~~~Gv~li~~~~~--~~------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~--~~~-~~  181 (293)
T PRK10532        116 -SRRPVDFV--WVVLAVLGLWFLLPLGQ--DV------SHVDLTGAALALGAGACWAIYILSGQRAGAEHGP--ATV-AI  181 (293)
T ss_pred             -cCChHHHH--HHHHHHHHHheeeecCC--Cc------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hHH-HH
Confidence             35544444  44555678776442211  10      1335689999999999999999999988766543  333 45


Q ss_pred             hhHHHHHHHHHHHHhhCcHHHHHHHHHhChHHHHHHHHHHHhhhhhhh
Q 024538          215 TTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVSDLCFI  262 (266)
Q Consensus       215 ~n~~~~~~~~~~~~~~g~~~~~~~f~~~~p~~~~~~~~~s~~~a~Gq~  262 (266)
                      ...++.+...+....++..      ...++..+..++..++.++++++
T Consensus       182 ~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        182 GSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             HHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHH
Confidence            5566665555544443320      01344443334445555544443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.17  E-value=1.4e-05  Score=61.61  Aligned_cols=119  Identities=16%  Similarity=0.219  Sum_probs=86.6

Q ss_pred             HHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcC--CC-CCcchhHHHHHHHH-HHHHHHHhH
Q 024538           30 LVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA--ID-PVAPVYKYCLVSMS-NILTTTCQY  105 (266)
Q Consensus        30 ~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~--~~-~~~p~~~y~~~s~~-~~~a~~~~n  105 (266)
                      +..+.+++++..++         -.|...++.+++.+.+ ........+++  .+ +...+......+.. ...+..+.+
T Consensus         3 ~a~~~~~~k~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    3 WAIYSVFSKKLLKK---------ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             eeeHHHHHHHHhcc---------CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHH
Confidence            34556666666642         2355667777777665 33333222221  11 11223345566666 689999999


Q ss_pred             HhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538          106 EALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  158 (266)
Q Consensus       106 ~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~  158 (266)
                      .++++++.+...+.....|+.+++++++++|++.+++++++++++..|+.+..
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.16  E-value=0.00049  Score=61.77  Aligned_cols=100  Identities=13%  Similarity=0.087  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS  170 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~  170 (266)
                      ...+........+-+.+++|.|...-...-...|+.+.+++++++|+|.++++++++++...|+.+....+   + +   
T Consensus        67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-~---  139 (281)
T TIGR03340        67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSR---F-A---  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc---c-c---
Confidence            34455677888899999999999999888888899999999999999999999999999999999876432   1 1   


Q ss_pred             CCCccchhhHHHHHHHHHHhHhHHHHHHHH
Q 024538          171 KGRENTVWGVSLMVGYLGFDGFTSTFQDKL  200 (266)
Q Consensus       171 ~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~  200 (266)
                         ..+..|..+.+.+.++-+......++.
T Consensus       140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~  166 (281)
T TIGR03340       140 ---QHRRKAYAWALAAALGTAIYSLSDKAA  166 (281)
T ss_pred             ---ccchhHHHHHHHHHHHHHHhhhhcccc
Confidence               123458778888888888888766544

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.80  E-value=0.00023  Score=57.56  Aligned_cols=83  Identities=19%  Similarity=0.205  Sum_probs=62.6

Q ss_pred             hHHHHHHHHHHhHhHHHHHHHHHcc-----CCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHH--Hh-----ChHH
Q 024538          179 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV--YH-----HLDC  246 (266)
Q Consensus       179 G~~ll~~sl~~dg~~~~~qe~~~~~-----~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~--~~-----~p~~  246 (266)
                      |+++.+.|.++.|+++.++|+++++     .+.++.++++|+++.++++.++..+..++........  .+     .|+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999999998     6899999999999999999998776665444222211  22     4566


Q ss_pred             HHHHHHHHHhhhhhh
Q 024538          247 FFDVALLSTVSDLCF  261 (266)
Q Consensus       247 ~~~~~~~s~~~a~Gq  261 (266)
                      +..++..++.+.+-+
T Consensus        81 ~~~~~~~~~~~~~~n   95 (153)
T PF03151_consen   81 IFLLILSGLLAFLYN   95 (153)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666665555554433

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.72  E-value=0.0013  Score=53.02  Aligned_cols=135  Identities=11%  Similarity=0.130  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh-hhcC-------C-C-----CCcch
Q 024538           22 AVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA-SRKA-------I-D-----PVAPV   87 (266)
Q Consensus        22 ~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~-~~~~-------~-~-----~~~p~   87 (266)
                      ++.+--.+...+.+++|++++++-. ++++.+ +.-+.......+.+...+.... .+.+       . +     +...+
T Consensus         4 ~~l~s~~~~al~~v~~~~~~~~~~~-~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    4 LALASSLFSALRNVLIKKLLKKVSS-NSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-cccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            3444455667788889999876311 122222 2223333333333332222211 1100       0 0     11223


Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538           88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  158 (266)
Q Consensus        88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~  158 (266)
                      ......+++.+..+..++..+++.|.-++.+....|.+.+.++++++++++.+..++.+.++..+|+.+.+
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            34566788888999999999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.53  E-value=0.027  Score=50.98  Aligned_cols=112  Identities=10%  Similarity=0.076  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHhHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhccccChhh----HHHHHHHHHhhHHhhccCCCCCCCC
Q 024538           94 SMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSP  168 (266)
Q Consensus        94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS-~k~ipvmi~~~l~~~kry~~~~----~~~v~~it~Gv~lf~~~~~~~~~~~  168 (266)
                      +......+.+...|.+|+++++-+..=+ .-++.+.+++.+++|+|.+.++    +++++++.+|+++....+.+   +.
T Consensus        66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~---~~  142 (290)
T TIGR00776        66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK---SA  142 (290)
T ss_pred             HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc---cc
Confidence            3446778889999999999988866655 5566788899999999999999    99999999999887655311   11


Q ss_pred             CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHH
Q 024538          169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQI  212 (266)
Q Consensus       169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m  212 (266)
                      +.++..+...|+++.++|-++.++....-++.    +.++.+..
T Consensus       143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~  182 (290)
T TIGR00776       143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVL  182 (290)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceeh
Confidence            10000233679999999999999988888754    24455553

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.39  E-value=0.008  Score=56.21  Aligned_cols=134  Identities=11%  Similarity=0.045  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh-hhcCCCC-----CcchhHHHHHH
Q 024538           21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA-SRKAIDP-----VAPVYKYCLVS   94 (266)
Q Consensus        21 ~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~-~~~~~~~-----~~p~~~y~~~s   94 (266)
                      ....+--.++..|.++|.|..++ |+       ....+++.++++..+...+.... .+...+.     .......+..+
T Consensus       192 ~l~l~aa~~wa~~~il~~~~~~~-~~-------~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~  263 (358)
T PLN00411        192 ALLTIQGIFVSVSFILQAHIMSE-YP-------AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMA  263 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-cC-------cHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHH
Confidence            33444445667788889987642 32       22244555554443333222111 1111110     11111111123


Q ss_pred             HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538           95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  162 (266)
Q Consensus        95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~  162 (266)
                      +....+-.+.|+++++++...--++-...|+..+++++++++++.++.++++.+++.+|+.+...++.
T Consensus       264 i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        264 IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            33456777899999999999999999999999999999999999999999999999999999987654

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.23  E-value=6.6e-05  Score=66.63  Aligned_cols=171  Identities=15%  Similarity=0.170  Sum_probs=115.2

Q ss_pred             hhHHHHH-HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC--C
Q 024538           87 VYKYCLV-SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--G  163 (266)
Q Consensus        87 ~~~y~~~-s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~--~  163 (266)
                      -|+|++. ++.-+.+..+.++|++|+|.+=-++.-=+.|+.+.+++++++|++|+..+.+...+-..|+++-.-.+.  +
T Consensus        96 ~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG  175 (346)
T KOG4510|consen   96 KRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG  175 (346)
T ss_pred             cEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence            3444433 677788889999999999999988888899999999999999999999999999999999987543210  0


Q ss_pred             CCCCCCCC-CCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHHh
Q 024538          164 ADLSPYSK-GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH  242 (266)
Q Consensus       164 ~~~~~~~~-~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~~  242 (266)
                      ++.+...+ ..+.+..|....+.+.+.-+-.-..-.++-|+  .|..--|-|-...+++.+++.+..-|++.  +-.+-+
T Consensus       176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~--lP~cgk  251 (346)
T KOG4510|consen  176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQ--LPHCGK  251 (346)
T ss_pred             CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhcccee--cCcccc
Confidence            11111111 11345667777777777767666666666554  33444566777778888887765555332  111122


Q ss_pred             ChHHHHHHHHHHHhhhhhhhhh
Q 024538          243 HLDCFFDVALLSTVSDLCFIII  264 (266)
Q Consensus       243 ~p~~~~~~~~~s~~~a~Gq~~i  264 (266)
                      +.   +.+.-+++.|.+||+++
T Consensus       252 dr---~l~~~lGvfgfigQIll  270 (346)
T KOG4510|consen  252 DR---WLFVNLGVFGFIGQILL  270 (346)
T ss_pred             ce---EEEEEehhhhhHHHHHH
Confidence            22   22334577788888875

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.02  E-value=0.037  Score=48.42  Aligned_cols=62  Identities=13%  Similarity=0.129  Sum_probs=56.5

Q ss_pred             HHHH-HHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhh
Q 024538           93 VSMS-NILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGC  154 (266)
Q Consensus        93 ~s~~-~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv  154 (266)
                      .+.. ...+..+-+.++++++.....+.....|+..+++++++++++.+..+++++.++..|+
T Consensus       197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            4443 5678888999999999999999999999999999999999999999999999999886

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.93  E-value=0.018  Score=52.32  Aligned_cols=134  Identities=15%  Similarity=0.167  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHh--hhcCCCC-----C--cchhHHH
Q 024538           21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIA--SRKAIDP-----V--APVYKYC   91 (266)
Q Consensus        21 ~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~--~~~~~~~-----~--~p~~~y~   91 (266)
                      +....-..+....+.+|||++++ |+.      .+.-+.+..-+++.....+....  .++..+.     +  ..+...+
T Consensus       157 ~ll~~sl~~~a~~~~~qe~~~~~-~~~------~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~  229 (303)
T PF08449_consen  157 ILLLLSLLLDAFTGVYQEKLFKK-YGK------SPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLL  229 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCC------cHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHH
Confidence            33444446677788899999864 331      11223333333333333333222  2210000     1  1233445


Q ss_pred             HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      ..+++......+-+...+..+-.+..+....+-+.+++++.+++++++++.+|++++++..|+.+-.+.+
T Consensus       230 ~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  230 LFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            6677777777777777888888999999999999999999999999999999999999999999988873

; GO: 0055085 transmembrane transport

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.90  E-value=0.044  Score=49.39  Aligned_cols=124  Identities=8%  Similarity=0.090  Sum_probs=83.0

Q ss_pred             HHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhHH---HHHHH-HHHHHHH
Q 024538           27 MTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKY---CLVSM-SNILTTT  102 (266)
Q Consensus        27 ~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~~~~p~~~y---~~~s~-~~~~a~~  102 (266)
                      -.+|..+++.++|..+.          .+...+..|.....+...+.............+...+   ...++ ....+..
T Consensus       159 ~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~  228 (292)
T PRK11272        159 SASWAFGSVWSSRLPLP----------VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAIS  228 (292)
T ss_pred             HHHHHHHHHHHHhcCCC----------cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            45666667767775421          1233445565555544333322221111111122222   33333 3456677


Q ss_pred             HhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538          103 CQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus       103 ~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      +-+.++++++.....+.-...|+..+++++++++++.+..++++.+++..|+.+....
T Consensus       229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999987665

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.88  E-value=0.037  Score=42.99  Aligned_cols=64  Identities=9%  Similarity=-0.027  Sum_probs=58.8

Q ss_pred             HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538           95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  158 (266)
Q Consensus        95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~  158 (266)
                      ..+..+..+-..+++.+|...--..-+..++-+++.+++++|+|.+++|++.+.++..|+++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5678899999999999999988888888889999999999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=96.74  E-value=0.016  Score=52.32  Aligned_cols=61  Identities=15%  Similarity=0.216  Sum_probs=56.0

Q ss_pred             HHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538          101 TTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus       101 ~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      +.+.+.++++++-.+..+.-..|++.++++++++++++.+..++++.+++..|+.+....+
T Consensus       235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            3566689999999999999999999999999999999999999999999999999988764

specificities overlap.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.53  E-value=0.042  Score=50.92  Aligned_cols=141  Identities=11%  Similarity=0.050  Sum_probs=75.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCcc-hhHH
Q 024538           15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID---PVAP-VYKY   90 (266)
Q Consensus        15 ~~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~~---~~~p-~~~y   90 (266)
                      ..+.--+.+..=-..|..+.++||++.++.     +..++-.++.+.+++.+.+...+   ..+.+.+   .... ...+
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~-----~~~~~lg~~Glfg~ii~~iq~~i---le~~~i~~~~w~~~~~~~~  236 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKKA-----PRVEFLGMLGLFGFIISGIQLAI---LERSGIESIHWTSQVIGLL  236 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccC-----CHHHHHHHHHHHHHHHHHHHHHh---eehhhhhccCCChhhHHHH
Confidence            345544445555677888999999998742     23344444444444443333222   2221111   1101 0111


Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCC
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  163 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~  163 (266)
                      ..-+++.+..-.+....+++-+-....+.=.....-.+++++++++.++++.-+++.+++.+|++++...++.
T Consensus       237 v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  237 VGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            1111111111122233344433333333222333447889999999999999999999999999999987643

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=96.36  E-value=0.059  Score=46.22  Aligned_cols=147  Identities=12%  Similarity=0.125  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCC
Q 024538           89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP  168 (266)
Q Consensus        89 ~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~  168 (266)
                      +-.|-+++-.+++++--.||+-++.+...-.-+|.-.+|.+++++++|.|+..-+++++++-..|+++..+.|+.     
T Consensus        55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-----  129 (290)
T KOG4314|consen   55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-----  129 (290)
T ss_pred             eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-----
Confidence            335566777788888889999999999999999999999999999999999999999999999999999888531     


Q ss_pred             CCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCC-ChhhHHHHhhHHHHHHH-HHH--HHhhC-cHHHHHHHHHhC
Q 024538          169 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM-EIHNQIFYTTLCSCVLS-LSG--LILEG-HLFLAIDFVYHH  243 (266)
Q Consensus       169 ~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~-~~~e~m~~~n~~~~~~~-~~~--~~~~g-~~~~~~~f~~~~  243 (266)
                          ....+.|+...+.|.++.+++-+.-.+...+-+. +....|--..++.+++. ++.  +.++| |-.++++...+-
T Consensus       130 ----~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG  205 (290)
T KOG4314|consen  130 ----HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWG  205 (290)
T ss_pred             ----hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCch
Confidence                1346899999999999999888877666544322 23444545555555553 333  34455 333333333333


Q ss_pred             h
Q 024538          244 L  244 (266)
Q Consensus       244 p  244 (266)
                      |
T Consensus       206 ~  206 (290)
T KOG4314|consen  206 C  206 (290)
T ss_pred             h
Confidence            3

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.23  E-value=0.17  Score=47.02  Aligned_cols=67  Identities=18%  Similarity=0.270  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      ++.+..-+.++..+++.++--++.+.-..|++.+.+.++++++++.+..++++.+++.+|+.+.++.
T Consensus       283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            3344444444446999999999999999999999999999999999999999999999999987653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.15  E-value=0.056  Score=42.71  Aligned_cols=75  Identities=11%  Similarity=0.036  Sum_probs=64.0

Q ss_pred             hhHHHHHHHHHHHHHHHhHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~-~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      +..+...-+++..+.++=..|+|++|..+- -+......+-+.+.++++++++.++.+++...++.+|++.....+
T Consensus        30 ~~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         30 NGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            355677888889999999999999887764 444667889999999999999999999999999999999887664

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.94  E-value=0.6  Score=41.98  Aligned_cols=128  Identities=9%  Similarity=0.065  Sum_probs=86.5

Q ss_pred             hhHHHHHHHHHHHHHHHhHHhhhcCChhHHHH-HhhcchHHHHHHHHHHhccccChhhHH----HHHHHHHhhHHhhccC
Q 024538           87 VYKYCLVSMSNILTTTCQYEALKYVSFPVQTL-AKCAKMIPVMIWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFP  161 (266)
Q Consensus        87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l-~KS~k~ipvmi~~~l~~~kry~~~~~~----~v~~it~Gv~lf~~~~  161 (266)
                      +.--++.+++-......+..|++++.++.-+= .-..-++-+-+++++++++--+..+++    +++++.+|+++.++.|
T Consensus        45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~  124 (269)
T PF06800_consen   45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD  124 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence            34446778888999999999999865432111 112335667888999999876766655    8889999999998886


Q ss_pred             CCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHccCCCChhhHHHHhhHHHHHH
Q 024538          162 SGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVL  222 (266)
Q Consensus       162 ~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~~~~~~~~e~m~~~n~~~~~~  222 (266)
                      .+++   +.+++++..-|+..++++.+....+....+-    .+.++++..+ -...+..+
T Consensus       125 ~~~~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~l-PqaiGm~i  177 (269)
T PF06800_consen  125 KKSD---KSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFL-PQAIGMLI  177 (269)
T ss_pred             cccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHH-HHHHHHHH
Confidence            4322   1112345667999999999988888888643    4556666655 33334433

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.91  E-value=0.57  Score=42.19  Aligned_cols=67  Identities=9%  Similarity=-0.024  Sum_probs=60.2

Q ss_pred             HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      +....+..+.|.++++++-....+.-...|+...++++++++++.++.+++..+++.+|++......
T Consensus       217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            3455677788999999999999999999999999999999999999999999999999999887663

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.73  E-value=0.098  Score=47.77  Aligned_cols=68  Identities=12%  Similarity=0.254  Sum_probs=61.1

Q ss_pred             HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538           95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  162 (266)
Q Consensus        95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~  162 (266)
                      .++..+..++..|+.+.|.+..+=+-+..++...+++..+.|+|.+++++++++++.+|+++.....+
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            45577778999999999999999889999999999999999999999999999999999998776643

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=95.49  E-value=0.13  Score=41.16  Aligned_cols=71  Identities=14%  Similarity=0.093  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHH--HHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           90 YCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGT--LIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~--l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      ...--+++..+..+-+.+++.+|.+.---.=+.-.+-+++.++  ++++++.+++|++.++++.+|+.+...+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            3344567888889999999998776665555544445666666  4799999999999999999999997654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=95.42  E-value=0.7  Score=41.71  Aligned_cols=67  Identities=13%  Similarity=0.059  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           95 MSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        95 ~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      +....+-.+-+.++++++....-+.-..-|+...++++++++++.++.+++..+++..|+.+...+.
T Consensus       223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3445566788889999988888888888888889999999999999999999999999999887764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=95.11  E-value=0.27  Score=43.99  Aligned_cols=63  Identities=6%  Similarity=0.058  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHH
Q 024538           94 SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI  156 (266)
Q Consensus        94 s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~l  156 (266)
                      .+....+..+-++++++++...........|+...++++++++++.++.++++.+++.+|+.+
T Consensus       218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            455566778889999999987777777778888999999999999999999999999999975

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.99  E-value=0.67  Score=35.97  Aligned_cols=73  Identities=8%  Similarity=0.039  Sum_probs=60.0

Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhh-cchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKC-AKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS-~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      ......-+.+..+..+=..|++.+|..+---.-+ ...+-+.+.++++++++.++.+++...++.+|++.....
T Consensus        31 ~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         31 WPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344556777778888888999999887665554 467788999999999999999999999999999998665

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=94.97  E-value=0.82  Score=41.24  Aligned_cols=69  Identities=6%  Similarity=0.072  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      ..++....+..+-++++++++-..--+.-...|+...++++++++++.++.++...+++.+|+.+...+
T Consensus       218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345567788999999999999999999999999999999999999999999999999998888887765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=94.90  E-value=0.47  Score=42.90  Aligned_cols=114  Identities=14%  Similarity=0.179  Sum_probs=74.4

Q ss_pred             chHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCccchhhHHHHHHHHHHhHhHHHHHHHHHc
Q 024538          123 KMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK  202 (266)
Q Consensus       123 k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~dg~~~~~qe~~~~  202 (266)
                      .|+..++.|.+++|+|.++.|+++|++-++||..-+...           .+.+...+.+.+..    |+++...    |
T Consensus       108 nPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----------g~lpwval~la~sf----~~Ygl~R----K  168 (293)
T COG2962         108 NPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----------GSLPWVALALALSF----GLYGLLR----K  168 (293)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----------CCCcHHHHHHHHHH----HHHHHHH----H
Confidence            367788899999999999999999999999999877652           14455444444332    4444443    5


Q ss_pred             cCCCChhhHHHHhhHHHHHHHHHHHHhhCcHHHHHHHHH-hChHHHHHHHHHHHhhh
Q 024538          203 GYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVSD  258 (266)
Q Consensus       203 ~~~~~~~e~m~~~n~~~~~~~~~~~~~~g~~~~~~~f~~-~~p~~~~~~~~~s~~~a  258 (266)
                      +-+.+..+-+.-.-++-++.++..+++.++-.+   |.. +++.....+.+-+..++
T Consensus       169 ~~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTa  222 (293)
T COG2962         169 KLKVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTA  222 (293)
T ss_pred             hcCCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHH
Confidence            567777777777777777777776655443332   444 45554444444344333

>PRK11689 aromatic amino acid exporter; Provisional

Probab=94.86  E-value=1.2  Score=40.03  Aligned_cols=69  Identities=10%  Similarity=-0.024  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           92 LVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        92 ~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      ..++....+-.+-|+++|+++...-.+.=...|+...++++++.+++.+..+++..+++..|+.+....
T Consensus       220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            334556667888899999999998888888889999999999999999999999999999999988765

>TIGR00803 nst UDP-galactose transporter

Probab=94.68  E-value=0.37  Score=41.49  Aligned_cols=66  Identities=15%  Similarity=0.231  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHH
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSI  156 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~l  156 (266)
                      ..+.+.......+-+..++|.+-.+..+.-+...+.+.++++++++++.+..+++++.++..|+.+
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344566777778889999999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=94.67  E-value=0.16  Score=40.53  Aligned_cols=71  Identities=11%  Similarity=0.173  Sum_probs=53.5

Q ss_pred             hHHHHH-HHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhh
Q 024538           88 YKYCLV-SMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFI  158 (266)
Q Consensus        88 ~~y~~~-s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~  158 (266)
                      +.|... ++....+-.+=+.|++-=+.|-.+=.-+..++.+.+++++++|+|.+..+++.+.++++|+++..
T Consensus        67 ~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          67 WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            345544 44445555566778876555555545566788899999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.20  E-value=0.89  Score=35.09  Aligned_cols=74  Identities=15%  Similarity=0.076  Sum_probs=60.9

Q ss_pred             hhHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           87 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      .+.....-+.+..+-.+=-.|+|++|..+ |-+.---..+-+.+.|+++++++.+..+++...++.+|++.--..
T Consensus        30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34556667777888888888999988876 455566667789999999999999999999999999999876554

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=94.17  E-value=0.38  Score=37.32  Aligned_cols=70  Identities=13%  Similarity=0.114  Sum_probs=58.0

Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHh
Q 024538           88 YKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  157 (266)
Q Consensus        88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf  157 (266)
                      ......-..+..+-++=..|+|++|..+ +-+.-....+-+.+.++++++++.++.|++...++..|++..
T Consensus        36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3455667777888888889999988875 345555667889999999999999999999999999999874

>PRK11431 multidrug efflux system protein; Provisional

Probab=94.11  E-value=0.46  Score=36.58  Aligned_cols=74  Identities=11%  Similarity=0.030  Sum_probs=60.6

Q ss_pred             hhHHHHHHHHHHHHHHHhHHhhhcCChhH-HHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           87 VYKYCLVSMSNILTTTCQYEALKYVSFPV-QTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        87 ~~~y~~~s~~~~~a~~~~n~aL~yvs~p~-~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      +......-..+..+.++=..|+|.+|..+ +-+.-.-..+-+.+.++++++++.++.+++...++..|++.-...
T Consensus        29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            34455667788888888889999988875 445555677889999999999999999999999999999986543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=93.25  E-value=4.4  Score=36.77  Aligned_cols=127  Identities=11%  Similarity=0.103  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHHHHhhhcCC-----CCCcchhHHHHHHHHH
Q 024538           23 VSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAI-----DPVAPVYKYCLVSMSN   97 (266)
Q Consensus        23 ~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~~~~~~~~~-----~~~~p~~~y~~~s~~~   97 (266)
                      +.++-.+|..||....++.-..    ...+       +.+++.-...+.+++.+.....     .+..........+...
T Consensus       153 al~la~sf~~Ygl~RK~~~v~a----~~g~-------~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT  221 (293)
T COG2962         153 ALALALSFGLYGLLRKKLKVDA----LTGL-------TLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcCCch----HHhH-------HHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH
Confidence            4455678999998777664221    1111       2455556666666665433211     2334455667778888


Q ss_pred             HHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           98 ILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        98 ~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      .....+-..|-+.+|+++-=+..=-.|+-..+.+++++++.++..|+++-+.+-.|+++++.+
T Consensus       222 avpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         222 AVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999988887777777888999999999999999999999999999876

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=92.80  E-value=5.4  Score=34.65  Aligned_cols=74  Identities=18%  Similarity=0.157  Sum_probs=61.3

Q ss_pred             hhHHHHHHHHHH-HHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           87 VYKYCLVSMSNI-LTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        87 ~~~y~~~s~~~~-~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      +......++... .+..+-+.+++.++.......-...++..+++++++.+++.+..+++..+++..|+.+....
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            334445555555 47888899999999998888777778888888999999999999999999999999987655

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=90.89  E-value=0.5  Score=36.91  Aligned_cols=70  Identities=11%  Similarity=0.108  Sum_probs=59.3

Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHh
Q 024538           88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIF  157 (266)
Q Consensus        88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf  157 (266)
                      ++|..+=..|..++..=+..|..-|.+.-+-. -|..-+.+.+.++++.+|.-+++.++.+.++..|+++.
T Consensus        42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            57777778888888888888888777665544 58889999999999999999999999999999999763

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=90.74  E-value=1.1  Score=41.35  Aligned_cols=141  Identities=13%  Similarity=0.049  Sum_probs=97.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHH-HHHH-hhhcCC------CCCcch
Q 024538           16 VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA-GTLI-ASRKAI------DPVAPV   87 (266)
Q Consensus        16 ~~~l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~-~~~~-~~~~~~------~~~~p~   87 (266)
                      .+.-.+++.+-..++....+++|++.+.+    +++.+.... ...+.-++.+.-. .... ..+...      ....+.
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~l-l~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~  235 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSK----GESLNSMNL-LYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF  235 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHH-HHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh
Confidence            34455666667778888899999999743    233333222 2222222222211 2111 111111      222334


Q ss_pred             hHHHHHHHHHHHHHHHhHHhhhcCChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           88 YKYCLVSMSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        88 ~~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      ......+++...-+..++..+..+|-=|++++-..|-+.+..+++++++++.++.+.+..++-.+|+.+....+
T Consensus       236 ~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  236 LILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            45566678888889999999999999999999999999999999999999999999999999999999887663

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=87.79  E-value=5  Score=29.84  Aligned_cols=60  Identities=15%  Similarity=0.104  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHhHHhhhcCChhHH-HHHhhcchHHHHHHHHHHhccccChhhHHHHHHH
Q 024538           91 CLVSMSNILTTTCQYEALKYVSFPVQ-TLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLV  150 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~yvs~p~~-~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~i  150 (266)
                      ...-.++..+..+=..|+|++|.++- -+.-....+-+.+.+.++++++.++.|++...++
T Consensus        33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33444788888888999999887764 4455577888999999999999999999988765

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.22  E-value=12  Score=34.05  Aligned_cols=133  Identities=18%  Similarity=0.255  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCc--eeehHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCCcchhHHH
Q 024538           19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEY--FKYSLFLVFCNRLMTSAVSAGTLIASRK-----AIDPVAPVYKYC   91 (266)
Q Consensus        19 l~~~~~Gi~~~~l~~g~~qE~i~~~~y~~~~~~--F~~~~fL~~~q~~~~~l~~~~~~~~~~~-----~~~~~~p~~~y~   91 (266)
                      -...+.|-..+=..-|-+||+++|...+++.|.  .+|.+-+.+.       +  .-+..+++     ..-.+.|++.|-
T Consensus       191 Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vfl-------f--~~mvlTge~f~a~~fcaehp~~tyG  261 (367)
T KOG1582|consen  191 GVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFL-------F--APMVLTGELFSAWTFCAEHPVRTYG  261 (367)
T ss_pred             eHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHH-------H--HHHHhcccchhhhHHHHhCcHhHHH
Confidence            345667777777788999999998654433443  2333222211       1  11112221     111235666553


Q ss_pred             HHHHHHHHHHHHh-HHhhhc---CChhHHHHHhhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           92 LVSMSNILTTTCQ-YEALKY---VSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        92 ~~s~~~~~a~~~~-n~aL~y---vs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      .. ++...+.+++ +..|..   -.-++-...-..+=..+.+++++++.|.++.....+-.++..|+.+=++++
T Consensus       262 y~-~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  262 YA-FLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HH-HHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            22 2222222222 111211   122333333334455678899999999999999999999999999998885

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=85.24  E-value=5.8  Score=35.78  Aligned_cols=70  Identities=11%  Similarity=0.038  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHhHHhhh-cCChhHHHHHhhcchHHHHHHHHHHhccccChhhH----HHHHHHHHhhHHhhcc
Q 024538           91 CLVSMSNILTTTCQYEALK-YVSFPVQTLAKCAKMIPVMIWGTLIMQKRYKGYDY----FLALLVTLGCSIFILF  160 (266)
Q Consensus        91 ~~~s~~~~~a~~~~n~aL~-yvs~p~~~l~KS~k~ipvmi~~~l~~~kry~~~~~----~~v~~it~Gv~lf~~~  160 (266)
                      ...++....+..+=..+++ +++..+.-+.-..-|+...+++++++|++.+++|+    +..+++..|+.+-.++
T Consensus       215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            3466666666666668888 89988888877777888999999999999999999    9999999998876543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=84.45  E-value=7.4  Score=36.66  Aligned_cols=128  Identities=20%  Similarity=0.207  Sum_probs=72.0

Q ss_pred             HHHHhhhhhhcccCCCCCCCceeehHHHHHHHHHHHHHHHHHH---HHhhhcCCCCCcch-hHHHHHHHHHH----HHHH
Q 024538           31 VIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGT---LIASRKAIDPVAPV-YKYCLVSMSNI----LTTT  102 (266)
Q Consensus        31 l~~g~~qE~i~~~~y~~~~~~F~~~~fL~~~q~~~~~l~~~~~---~~~~~~~~~~~~p~-~~y~~~s~~~~----~a~~  102 (266)
                      +.||++---+ |++-+++|++-.-++|..+.. +++.+.....   +-..+.. +-..|- .++..+-+.+.    .+=+
T Consensus       257 ~~YavY~vll-k~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e-~F~lP~~~q~~~vv~~~ligtvvSDy  333 (416)
T KOG2765|consen  257 LLYAVYTVLL-KRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEE-RFELPSSTQFSLVVFNNLIGTVVSDY  333 (416)
T ss_pred             HHHHHHHHHH-HhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccC-cccCCCCceeEeeeHhhHHHHHHHHH
Confidence            4444443333 333344567888888888776 3444443321   1122321 111221 12222222223    3333


Q ss_pred             HhHHhhhcCChhHHHHHhhcchHH-HHHHHHHHhccccChhhHHHHHHHHHhhHHhhccCC
Q 024538          103 CQYEALKYVSFPVQTLAKCAKMIP-VMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS  162 (266)
Q Consensus       103 ~~n~aL~yvs~p~~~l~KS~k~ip-vmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~~  162 (266)
                      +--+|.-.-+--+.++ --+-.|| -|+...++.+|.|++..+++...+-+|-++..+.+.
T Consensus       334 lW~~a~~lTs~Lv~Tl-gmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  334 LWAKAVLLTSPLVVTL-GMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHhccchhhee-eeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            3333443344334444 3444667 788899999999999999999999999999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	266
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.36
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.11

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.36  E-value=0.0029  Score=47.96  Aligned_cols=72  Identities=10%  Similarity=0.032  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhcc
Q 024538           89 KYCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  160 (266)
Q Consensus        89 ~y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~  160 (266)
                      .+....+.+..+..+-+.++|++|.+.--.. .+..++-+.+.++++++++.++.+++.+.++..|+++....
T Consensus        32 ~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3455566788888999999999999988665 89999999999999999999999999999999999988765

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.11  E-value=0.00063  Score=53.89  Aligned_cols=72  Identities=10%  Similarity=0.037  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHhHHhhhcCChhHHHHH-hhcchHHHHHHHHHHhccccChhhHHHHHHHHHhhHHhhccC
Q 024538           90 YCLVSMSNILTTTCQYEALKYVSFPVQTLA-KCAKMIPVMIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  161 (266)
Q Consensus        90 y~~~s~~~~~a~~~~n~aL~yvs~p~~~l~-KS~k~ipvmi~~~l~~~kry~~~~~~~v~~it~Gv~lf~~~~  161 (266)
                      +....+++..+..+-+.+++++|.+.-... .+..++.++++++++++++.++.+++.++++.+|+++....+
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            355567888899999999999999955444 889999999999999999999999999999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00