Citrus Sinensis ID: 024546
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| 225461810 | 235 | PREDICTED: bidirectional sugar transport | 0.845 | 0.957 | 0.679 | 2e-90 | |
| 356544144 | 235 | PREDICTED: bidirectional sugar transport | 0.883 | 1.0 | 0.646 | 1e-88 | |
| 356556652 | 235 | PREDICTED: bidirectional sugar transport | 0.860 | 0.974 | 0.657 | 2e-88 | |
| 351722328 | 235 | uncharacterized protein LOC100305842 [Gl | 0.883 | 1.0 | 0.646 | 4e-87 | |
| 358343709 | 235 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.864 | 0.978 | 0.632 | 1e-84 | |
| 358348726 | 236 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.842 | 0.949 | 0.648 | 8e-84 | |
| 388506414 | 236 | unknown [Medicago truncatula] | 0.842 | 0.949 | 0.648 | 1e-83 | |
| 217073964 | 236 | unknown [Medicago truncatula] gi|3884951 | 0.842 | 0.949 | 0.644 | 1e-82 | |
| 388521553 | 235 | unknown [Lotus japonicus] | 0.842 | 0.953 | 0.666 | 1e-80 | |
| 356554726 | 231 | PREDICTED: bidirectional sugar transport | 0.842 | 0.969 | 0.617 | 2e-78 |
| >gi|225461810|ref|XP_002285636.1| PREDICTED: bidirectional sugar transporter SWEET2 [Vitis vinifera] gi|302142809|emb|CBI20104.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/256 (67%), Positives = 196/256 (76%), Gaps = 31/256 (12%)
Query: 11 TVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPL 70
T+ KDA G+AGNIFAFGLFVSP+PTFRRI RN STE FSGLPY+YALLNCL+T+WYGTPL
Sbjct: 11 TICKDAAGVAGNIFAFGLFVSPIPTFRRIARNRSTESFSGLPYIYALLNCLVTLWYGTPL 70
Query: 71 VSADNILVTTVNSIGAAFQLVYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFF 130
VS +NI+VTTVNS+GAAFQLVYIILFITYT+K KKV
Sbjct: 71 VSYNNIMVTTVNSMGAAFQLVYIILFITYTDKRKKV------------------------ 106
Query: 131 PLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFVGLLSCAALISMFASPLFIIN 190
RM GLL+ I +F +IV SL+I + R+M VG LSCAALISMFASPLF+IN
Sbjct: 107 -------RMFGLLMVDIVLFLVIVVGSLEISDFTIRRMVVGFLSCAALISMFASPLFVIN 159
Query: 191 LVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVPNGIGTILGIVQLALYFNYK 250
LVIQT+SVEFMPFYLSLSTFLMS SFLAYGI+N DPF+YVPNG GT+LGIVQL LY YK
Sbjct: 160 LVIQTRSVEFMPFYLSLSTFLMSASFLAYGILNNDPFVYVPNGAGTVLGIVQLGLYSYYK 219
Query: 251 ETSGEESRDPLIVSYA 266
TS EESR+PLIVSY
Sbjct: 220 RTSAEESREPLIVSYG 235
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544144|ref|XP_003540515.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356556652|ref|XP_003546637.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351722328|ref|NP_001237496.1| uncharacterized protein LOC100305842 [Glycine max] gi|255626749|gb|ACU13719.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|358343709|ref|XP_003635940.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355501875|gb|AES83078.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|388509868|gb|AFK43000.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|358348726|ref|XP_003638394.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355504329|gb|AES85532.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388506414|gb|AFK41273.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|217073964|gb|ACJ85342.1| unknown [Medicago truncatula] gi|388495182|gb|AFK35657.1| unknown [Medicago truncatula] gi|388517353|gb|AFK46738.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388521553|gb|AFK48838.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|356554726|ref|XP_003545694.1| PREDICTED: bidirectional sugar transporter SWEET2-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| UNIPROTKB|Q8RZQ8 | 273 | SWEET1A "Bidirectional sugar t | 0.334 | 0.326 | 0.494 | 4.2e-47 | |
| UNIPROTKB|B8AYH1 | 261 | SWEET1B "Bidirectional sugar t | 0.327 | 0.333 | 0.517 | 9.7e-46 | |
| UNIPROTKB|Q60EC2 | 261 | SWEET1B "Bidirectional sugar t | 0.327 | 0.333 | 0.517 | 9.7e-46 | |
| TAIR|locus:2123426 | 258 | SWEET7 [Arabidopsis thaliana ( | 0.379 | 0.391 | 0.405 | 2.2e-40 | |
| TAIR|locus:2033319 | 261 | SWEET6 [Arabidopsis thaliana ( | 0.496 | 0.505 | 0.382 | 3.2e-39 | |
| UNIPROTKB|Q8W0K2 | 254 | SWEET6B "Bidirectional sugar t | 0.349 | 0.366 | 0.430 | 7.3e-38 | |
| UNIPROTKB|A2WSD3 | 254 | SWEET6B "Bidirectional sugar t | 0.349 | 0.366 | 0.430 | 4e-37 | |
| UNIPROTKB|A2WSD8 | 259 | SWEET6A "Bidirectional sugar t | 0.349 | 0.359 | 0.430 | 5.1e-37 | |
| UNIPROTKB|Q8LR09 | 259 | SWEET6A "Bidirectional sugar t | 0.349 | 0.359 | 0.430 | 5.1e-37 | |
| TAIR|locus:2099362 | 236 | SWEET2 "AT3G14770" [Arabidopsi | 0.661 | 0.745 | 0.455 | 6.5e-35 |
| UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Score = 263 (97.6 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 44/89 (49%), Positives = 66/89 (74%)
Query: 18 GIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNIL 77
G++GN+ A LF+SPV TF RII+ STE+FSG+PY LLNCL++ WYG P VS +NIL
Sbjct: 10 GVSGNVIALFLFLSPVVTFWRIIKKRSTEDFSGVPYNMTLLNCLLSAWYGLPFVSPNNIL 69
Query: 78 VTTVNSIGAAFQLVYIILFITYTEKDKKV 106
VTT+N G+ + +Y+++F+ + E+ ++
Sbjct: 70 VTTINGTGSVIEAIYVVIFLIFAERKARL 98
|
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| UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2033319 SWEET6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2099362 SWEET2 "AT3G14770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 266 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 1e-16 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 9e-16 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
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Score = 72.6 bits (179), Expect = 1e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 168 MFVGLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPF 227
+GLL +++F SPL I+ VI+TKSVE MPF L+ L ++ +L YG++ D +
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 228 IYVPNGIGTILGIVQLALYFNYK 250
I +PNG+G +LG + L L+ Y
Sbjct: 61 IIIPNGVGCVLGTIYLILFIIYP 83
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 266 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.85 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.83 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.41 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.28 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.18 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.66 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.02 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 97.94 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 97.39 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 96.61 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 96.22 | |
| PHA02246 | 192 | hypothetical protein | 95.57 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 94.63 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 94.16 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 92.73 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 92.5 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 83.95 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 83.63 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 80.56 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=1.4e-46 Score=331.45 Aligned_cols=211 Identities=45% Similarity=0.771 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCcCCccchhHHHHHHHHHHHHHHhCCcccCCceEEEeechhhHHHHH
Q 024546 11 TVLKDAVGIAGNIFAFGLFVSPVPTFRRIIRNHSTEEFSGLPYVYALLNCLITMWYGTPLVSADNILVTTVNSIGAAFQL 90 (266)
Q Consensus 11 ~~~~~ivg~~a~i~ti~m~~Splp~~~~I~k~kst~~~s~~p~v~~~~n~~lW~~YG~~~l~~~~~~I~~~N~~G~~l~~ 90 (266)
....+++|..|+++++++|++|+|+|+||+|+||+|++|..||+++++||.+|+.|| .+++|+..++.+|++|++++.
T Consensus 3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG--~~~~~d~llitIN~~G~~ie~ 80 (243)
T KOG1623|consen 3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG--LLKVHDYLLITINGIGLVIET 80 (243)
T ss_pred chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh--hhccCceEEEEEehhcHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999 567646789999999999999
Q ss_pred HHHhhheeeecCcccccCcccccchhccccCccccccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhccCcchhhhhh
Q 024546 91 VYIILFITYTEKDKKVSYPFSHMHLVYCSGSAICSVNQFFPLCSRQVRMLGLLLAVIGIFSIIVAVSLQIVNPFSRQMFV 170 (266)
Q Consensus 91 ~y~~v~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 170 (266)
+|+..|+.|+++|++. ........+. +..+++++....++++.+.+.+
T Consensus 81 ~Yi~~f~~ya~~k~~~------------------------------~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l 128 (243)
T KOG1623|consen 81 VYISIFLYYAPKKKTV------------------------------KIVLALVLGV--IGLIILLTLLLFHDPERRVSVL 128 (243)
T ss_pred HHHHHHheecCchhee------------------------------EeeehHHHHH--HHHHHHHHHHhcCCcceeeeee
Confidence 9999999999988852 0011111111 1122234444567778889999
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHHhcCccceechhHHHHHHHHHHHHhhhccccCCcceecChhhHHHHHHHhhhheeEec
Q 024546 171 GLLSCAALISMFASPLFIINLVIQTKSVEFMPFYLSLSTFLMSTSFLAYGIMNWDPFIYVPNGIGTILGIVQLALYFNYK 250 (266)
Q Consensus 171 G~i~~~~si~~~~sPL~~i~~virtks~~~~~~~~~~~~~~n~~lW~~YG~l~~D~~i~~~N~~G~~l~~~ql~l~~~y~ 250 (266)
|.+|.+++++||+|||..+++|+|+||+|.||++++++.++++..|+.||++.+|.++.+||++|++++..|+.+|+.||
T Consensus 129 G~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~ 208 (243)
T KOG1623|consen 129 GIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYP 208 (243)
T ss_pred ehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 024546 251 ETSGE 255 (266)
Q Consensus 251 ~~~~~ 255 (266)
+++.+
T Consensus 209 ~~~~~ 213 (243)
T KOG1623|consen 209 KTTEK 213 (243)
T ss_pred CCccc
Confidence 88744
|
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| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >PHA02246 hypothetical protein | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
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| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00