Citrus Sinensis ID: 024554

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
Protein Sequence
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Secondary Structure (PSIPRED)
ccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccccccccccccEEEEccHHHHHHcHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHHcc
Coil and Loop (DISEMBL)
MDERGGSFVAVRRIsqgldrgntchstsAEVVAGSAAWLGRGLSCVcaqrresdprpsfdltpAQEECLQRLQLRIdvaydssiPEHREALRALWNAAFPDEELRDLISEQWKemgwqgkdpstdfrgggfiSLENLLYLARNFPKSFQDLLRkqegdrsvweypfavagVNITFMLIQMLdleavkprtMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVtrledlpsysllsr
Flexible Loop (DISEMBL)
MDERGGSFVAVRrisqgldrgntchSTSAEVVAGSAAWLGRGLSCVCAQRRESDprpsfdltpAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREllledvtrledlpsysllsr
Low Complexity Region (SEG)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTrrqlerellleDVTRLEDLPSYSLLSR
Disordered region (IsUnstruct)
********VAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCA******************ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDV**************
Disordered Region (DISOPRED)
***********RRISQGL*************VAGSAAWLGRGLSCVC************DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF*************KEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLR*****RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISEMBL)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQR********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISPRO)
*****GSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	266	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.703	0.191	0.313	1e-25
Q54RS7	618	ELMO domain-containing pr	no	no	0.661	0.284	0.338	9e-24
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.601	0.126	0.306	6e-19
Q54VR8	284	ELMO domain-containing pr	no	no	0.563	0.528	0.316	2e-18
Q08DZ3	293	ELMO domain-containing pr	yes	no	0.744	0.675	0.299	2e-17
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.515	0.467	0.335	2e-17
Q499U2	720	Engulfment and cell motil	yes	no	0.676	0.25	0.276	2e-16
A6QR40	652	Engulfment and cell motil	no	no	0.665	0.271	0.270	4e-16
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.556	0.505	0.335	7e-16
Q96BJ8	720	Engulfment and cell motil	no	no	0.676	0.25	0.266	8e-16

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  116 bits (291), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 27/214 (12%)

Query: 65  QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
           Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 125 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML---IQML 181
           DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L   I  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480

Query: 182 DLEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFKLMDHQWLAMR 226
               + P     +                F      +  AF+ +YC TF+++D  W  M 
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query: 227 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 260
            +YM F  +M S +  +        +T LE  P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  110 bits (275), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 16/192 (8%)

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 177
           DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query: 178 IQMLDLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 231
            Q+ +    +P           A        N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query: 232 FNTVMKSTRRQL 243
           F  V+K  + QL
Sbjct: 530 FPLVIKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 94.7 bits (234), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 16/176 (9%)

Query: 69  LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
           +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348

Query: 129 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKP 188
            G   L++L+YLA+N    F + L  ++ + +   YP+A +G+ +T  L+     E VKP
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKP 401

Query: 189 -------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 237
                    ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct: 402 INISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 11/161 (6%)

Query: 78  VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
           + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query: 138 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 197
           +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    K       + L
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLIDKPHFKIYFFKNGSTL 232

Query: 198 KFLSENESAFDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 237
                  + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct: 233 -------TQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

Dictyostelium discoideum (taxid: 44689)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 19/217 (8%)

Query: 45  CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 92
           CV    +E +  P  D       + CL ++    QL +DV       YDS   +H + L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 93  ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL 152
            LWN   P ++L+  IS+QW ++G+QG DP TDFRG G + L NL+Y + N+      +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 153 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYC 212
            +    +    Y +A+ G+N+T M   +L  EA+K        F+  +   E  F   YC
Sbjct: 193 SRSNHPKL--GYSYAIVGINLTEMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYC 246

Query: 213 ITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 248
                 D  W   +  S M FN   +    +++  LL
Sbjct: 247 YLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 49  QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 98
           + +  +P          + CL ++    QL +DV       YDS   +H E L  LWN  
Sbjct: 79  KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138

Query: 99  FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGD 158
            P ++L   IS+QW E+G+QG DP TDFRG G + L NL+Y + N+      +L +    
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHP 198

Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAVK 187
           +    Y +A+ G+N+T M   +L  EA+K
Sbjct: 199 KL--GYSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF PD E           R L   +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
            P+ D      G ++L+N+LY +R+ P ++   + +        E PFA + + +T +L 
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 179 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 238
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 239 TRRQLERELLLEDVT 253
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
           +P+ D      G ++L+N+LY +R  P ++   + +        E PFA + + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 179 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 238
            +L +   +P +     F       + +F  L+C++ +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 DLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 239 TRRQLERELLLE 250
            R QL R L L+
Sbjct: 471 VREQLARTLALK 482

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 80  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
           YDS+  +H + L  LW+   P ++L   IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 140 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF 199
            + N+      +L +    +    Y +A+ G+N+T M   +L  EA+K        F+  
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALKLHLY---NFVPG 234

Query: 200 LSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 233
           +   E  F   YC      D  WL     S M FN
Sbjct: 235 VPTMEH-FHQFYCYLVYEFDKFWLEEEPESIMYFN 268

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=2 SV=3

 Score = 84.3 bits (207), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+ L  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
           +P+ D      G ++L+N+LY +RN P ++   + +        E PFA   + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 412

Query: 179 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 238
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLRVG--EPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 239 TRRQLERELLLEDVT 253
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
255571033	267	ELMO domain-containing protein, putative	1.0	0.996	0.913	1e-141
225453354	267	PREDICTED: ELMO domain-containing protei	1.0	0.996	0.913	1e-141
449445499	267	PREDICTED: ELMO domain-containing protei	1.0	0.996	0.887	1e-138
356568581	266	PREDICTED: ELMO domain-containing protei	1.0	1.0	0.879	1e-138
356531822	266	PREDICTED: ELMO domain-containing protei	1.0	1.0	0.875	1e-138
297734628	287	unnamed protein product [Vitis vinifera]	1.0	0.926	0.850	1e-137
224137120	267	predicted protein [Populus trichocarpa]	1.0	0.996	0.883	1e-137
224063629	267	predicted protein [Populus trichocarpa]	1.0	0.996	0.880	1e-137
297817322	266	hypothetical protein ARALYDRAFT_486497 [	1.0	1.0	0.842	1e-131
18411543	266	ELMO/CED-12 domain-containing protein [A	1.0	1.0	0.834	1e-131

>gi|255571033|ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223534142|gb|EEF35858.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/267 (91%), Positives = 255/267 (95%), Gaps = 1/267 (0%)

Query: 1   MDERGGSFVAVRRISQGLDRG-NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RG NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLT  QEECLQRLQ RIDVAYDSSIPEH+EALRALWNAAFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTLTQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ A+NFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 239
           MLDLEAVKPRTMVGA FLKFL+ENESAFDLLYCITFKLMDHQWL M ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFNTVMKST 240

Query: 240 RRQLERELLLEDVTRLEDLPSYSLLSR 266
           RRQLERELLLED+TRLEDLPSY LL+R
Sbjct: 241 RRQLERELLLEDITRLEDLPSYGLLTR 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453354|ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]

 Score =  505 bits (1300), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/267 (91%), Positives = 258/267 (96%), Gaps = 1/267 (0%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 239
           MLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD+QWLAM ASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKST 240

Query: 240 RRQLERELLLEDVTRLEDLPSYSLLSR 266
           R QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 RCQLERELLLEDVSRLEDLPSYSLLTR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445499|ref|XP_004140510.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/267 (88%), Positives = 256/267 (95%), Gaps = 1/267 (0%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGL+RGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECL RLQ RID+AYDSSI EH+EALR LWN AFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ A+NFPKSFQDLLRKQEGDRS+WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 239
           MLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMDH+WLAM ASYMDFNTVMK+T
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAMHASYMDFNTVMKAT 240

Query: 240 RRQLERELLLEDVTRLEDLPSYSLLSR 266
           RRQLE+ELL+ED++RLE+LPSY LL+R
Sbjct: 241 RRQLEKELLIEDISRLEELPSYGLLNR 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568581|ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/266 (87%), Positives = 251/266 (94%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD SIPEH++ALRALW+AAFP+EEL  LISEQWK MGWQGK
Sbjct: 61  LTPAQEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 240
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 241 RQLERELLLEDVTRLEDLPSYSLLSR 266
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531822|ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/266 (87%), Positives = 251/266 (94%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD S+PEH++ALR LWNAAFP+EEL  LISEQWK+MGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 240
           LDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNTVMKSTR
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 241 RQLERELLLEDVTRLEDLPSYSLLSR 266
           RQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734628|emb|CBI16679.3| unnamed protein product [Vitis vinifera]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/287 (85%), Positives = 258/287 (89%), Gaps = 21/287 (7%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS--------------------AEVVAGSAAWL 39
           MD+RGG SFVAVRRISQGLDRGNTCHSTS                    AEVVAGSAAWL
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSDLSISVIVNNFMFTDIQICLAEVVAGSAAWL 60

Query: 40  GRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF 99
           GRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+F
Sbjct: 61  GRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASF 120

Query: 100 PDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDR 159
           P+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR
Sbjct: 121 PEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDR 180

Query: 160 SVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMD 219
           ++WEYPFAVAGVNITFMLIQMLDLEAVKPR+M GA FLKFLSENESAFDLLYCITFKLMD
Sbjct: 181 ALWEYPFAVAGVNITFMLIQMLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMD 240

Query: 220 HQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 266
           +QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 241 NQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137120|ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1| predicted protein [Populus trichocarpa]

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 236/267 (88%), Positives = 254/267 (95%), Gaps = 1/267 (0%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHS+SAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSSSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDVAYDSS+PEH+EAL+ALWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPPQEECLQRLQSRIDVAYDSSVPEHQEALKALWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARNFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 239
           MLDLEAVKPRT+VGATFLKFL E++SAFD LYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRTLVGATFLKFLEEDDSAFDRLYCITFKLMDHEWLDMRASYMDFNAVMKST 240

Query: 240 RRQLERELLLEDVTRLEDLPSYSLLSR 266
           RRQLERELL ED+TRLE+LPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEELPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063629|ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1| predicted protein [Populus trichocarpa]

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/267 (88%), Positives = 252/267 (94%), Gaps = 1/267 (0%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHSTSAE VAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSTSAEAVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDV YDSS+ +H+EAL+ LWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPVQEECLQRLQSRIDVPYDSSVLDHQEALKTLWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARNFPKSFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKST 239
           MLDLEAVKPR +VGATFLKFL+EN+SAFDLLYCITFKLMDH+WL MRASYMDFN VMKST
Sbjct: 181 MLDLEAVKPRALVGATFLKFLAENDSAFDLLYCITFKLMDHEWLTMRASYMDFNAVMKST 240

Query: 240 RRQLERELLLEDVTRLEDLPSYSLLSR 266
           RRQLERELL ED+TRLEDLPSY+LL+R
Sbjct: 241 RRQLERELLSEDITRLEDLPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817322|ref|XP_002876544.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata] gi|297322382|gb|EFH52803.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/266 (84%), Positives = 246/266 (92%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RIDVAYDSSI +H+EAL+ LW  AFP+EEL  ++SEQWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSISQHQEALKDLWKLAFPEEELHGIVSEQWKEMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLLY AR FPKSFQDLLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARQFPKSFQDLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 240
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 241 RQLERELLLEDVTRLEDLPSYSLLSR 266
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMVEDITCLEDLPSYSLLSQ 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411543|ref|NP_567097.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|30695160|ref|NP_850727.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|145332909|ref|NP_001078320.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|17473882|gb|AAL38361.1| putative protein [Arabidopsis thaliana] gi|20148671|gb|AAM10226.1| putative protein [Arabidopsis thaliana] gi|21536589|gb|AAM60921.1| unknown [Arabidopsis thaliana] gi|332646511|gb|AEE80032.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646512|gb|AEE80033.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana] gi|332646514|gb|AEE80035.1| ELMO/CED-12 domain-containing protein [Arabidopsis thaliana]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/266 (83%), Positives = 245/266 (92%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLLY AR FPKSF  LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTR 240
           LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 241 RQLERELLLEDVTRLEDLPSYSLLSR 266
           RQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	266
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	1.0	1.0	0.804	6.4e-115
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	1.0	1.0	0.796	2.9e-112
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.875	0.829	0.581	2.9e-71
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.879	0.883	0.546	3.6e-66
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.883	0.727	0.542	9.7e-64
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.563	0.704	0.602	1.3e-45
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.421	0.114	0.407	4.4e-24
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.639	0.275	0.338	1.1e-22
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.563	0.528	0.335	4.4e-20
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.605	0.509	0.325	1.4e-18

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
 Identities = 214/266 (80%), Positives = 234/266 (87%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct:     1 MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct:    61 LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
             DPSTDFRGGGFISLENLLY AR FPKSF  LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query:   181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 240
             LDLEAVKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   241 XXXXXXXXXXDVTRLEDLPSYSLLSR 266
                       D+T LEDLPSYSLLS+
Sbjct:   241 RQLEREIMIEDITSLEDLPSYSLLSQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
 Identities = 212/266 (79%), Positives = 232/266 (87%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+R GSFVAVRRISQGL+RG+  +S+SAE V GSAAWLGRGLSCVCAQRR+SD   +FD
Sbjct:     1 MDDREGSFVAVRRISQGLERGSVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQ LQ RIDVAYDS+IP H+EALR LW  +FP+EEL  LISEQWKEMGWQGK
Sbjct:    61 LTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
             DPSTDFRGGGFISLENLLY ARNF KSFQDLLRKQ GDRSVWEYPFAVAG+N+TFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQM 180

Query:   181 LDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTX 240
             LDLEAVKPRT+VGATFLKFLSENESAFDLLYCI FKLMD QWL+MRASYM+FNTVMKST 
Sbjct:   181 LDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query:   241 XXXXXXXXXXDVTRLEDLPSYSLLSR 266
                       D+  LEDLPSY+LL++
Sbjct:   241 RQLERELMLEDIMHLEDLPSYALLNQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 136/234 (58%), Positives = 175/234 (74%)

Query:    33 AGSAAW-LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREAL 91
             + + +W + + L+CVC  R+ +  R   +LTP QEE L+RL+ R+   YD+S P+H++AL
Sbjct:    48 SSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRPDHQDAL 107

Query:    92 RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDL 151
             RALW+A +PDE+L+DLIS+QWK MGWQGKDPSTDFRG GFISLENLL+ A+ F  SFQ L
Sbjct:   108 RALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRL 167

Query:   152 LRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLY 211
             L KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LSE+E AFDLLY
Sbjct:   168 LNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFDLLY 227

Query:   212 CITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLS 265
             C+ F +MD QWL   A+YM+FN V++ T           DV R+ED+PS+SLLS
Sbjct:   228 CVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 130/238 (54%), Positives = 170/238 (71%)

Query:    28 SAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEH 87
             +A  + G+ +W+G GL       R  D    + L+P QEE LQRLQ R+ V +D + P+H
Sbjct:    29 TATGMVGTRSWIG-GL--FTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDH 85

Query:    88 REALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS 147
             +E+L+ALWN AFP+  L  L++EQWKEMGWQG +PSTDFRG GFI+LENLL+ AR +P  
Sbjct:    86 QESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVC 145

Query:   148 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA-VKPRTMVGATFLKFLSENESA 206
             F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ + G  FLK L E+E A
Sbjct:   146 FRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERA 205

Query:   207 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 264
             FD+LYCI F +MD QWLAM ASYM+FN V+++T           D+ R++DLP+Y+LL
Sbjct:   206 FDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 129/238 (54%), Positives = 168/238 (70%)

Query:    29 AEVVAGSAAWLGRGLSCVCAQRRESDPR--PSFDLTPAQEECLQRLQLRIDVAYDSSIPE 86
             A++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ RI++ +D S  E
Sbjct:    85 AKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKRRIEIPFDGSRME 143

Query:    87 HREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPK 146
             H++ALR LW  A+P  EL  L SE WKEMGWQG DPSTDFRGGG+ISLENL++ A+ +P+
Sbjct:   144 HQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPE 203

Query:   147 SFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESA 206
             SFQ LL KQ+G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G  FL FL E+E A
Sbjct:   204 SFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMA 263

Query:   207 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 264
             FD LYCI F++MD QWLA RASYM+FN V+KST           DV+ + DLP+++LL
Sbjct:   264 FDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 94/156 (60%), Positives = 116/156 (74%)

Query:    82 SSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLA 141
             SS P  R  ++    + + DE+L+DLIS+QWK MGWQ KDPSTDFRG GFISLENL    
Sbjct:    58 SSTPSWR--IKKSLTSTYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENL---- 111

Query:   142 RNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLS 201
             R F K+F  LL+KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LS
Sbjct:   112 RFFAKTFSRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLS 171

Query:   202 ENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 237
             E+E AF LLYC+ F +MD QWL   A+YM+FN V++
Sbjct:   172 ESEWAFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 229 (85.7 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 46/113 (40%), Positives = 66/113 (58%)

Query:    65 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
             Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   125 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML 177
             DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 63/186 (33%), Positives = 107/186 (57%)

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 177
             DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query:   178 IQMLDLEAVKP--RTMVGATFLKFLSE----NESAFDLLYCITFKLMDHQWLAMRASYMD 231
              Q+ +    +P   +   ++++  L      N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct:   470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query:   232 FNTVMK 237
             F  V+K
Sbjct:   530 FPLVIK 535

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 54/161 (33%), Positives = 89/161 (55%)

Query:    78 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
             + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct:   116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query:   138 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 197
             +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP   +   F 
Sbjct:   176 IYFSTQHSEDAREILKNSN---SKCCYPFAITGINITALVLNLID----KPHFKI--YFF 226

Query:   198 KFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 237
             K  S   + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct:   227 KNGS-TLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 55/169 (32%), Positives = 83/169 (49%)

Query:    73 QLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFI 132
             QLR +  YDS   +H + L  LW    PD  L   +++QW+++G+QG DP TDFRG G +
Sbjct:   128 QLRAE-KYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTDFRGMGML 186

Query:   133 SLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR--T 190
              LENLLY A  +  + + +L           Y +A+ G+N+T M   ++   A K     
Sbjct:   187 GLENLLYFATAYNDAAKHVLLHSM--HPTLGYTYAIVGINLTSMAFNLVKTGAAKTHFYN 244

Query:   191 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKS 238
             +V      F +  +  F  LYC  F   D  W+     + MDF  + +S
Sbjct:   245 LVVQHRQDFSTVED--FHKLYCYLFFEFDRFWMESDPRNIMDFREIYQS 291

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	266
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	9e-70

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  212 bits (541), Expect = 9e-70
 Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 67  ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDF 126
             L  L+      +D   PEHR  L+ LW A FPDE L   +SE+WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 127 RGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAV 186
           RG G + L NLLY A N+P  FQ LL +     +  EYPFAVA +N+T ML ++L +  +
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 187 KPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 237
                    F         AF+ LYC  F L D  W  MRA+ MDFN V++
Sbjct: 121 DQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	266
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	100.0

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.5e-67  Score=474.83  Aligned_cols=259  Identities=51%  Similarity=0.814  Sum_probs=243.4

Q ss_pred             CCCCCCceEEEe-eccCCCCCCCcccCCcchhhccchhhhcc-----cccccccccCCCCCCCCcCCCHHHHHHHHHHHH
Q 024554            1 MDERGGSFVAVR-RISQGLDRGNTCHSTSAEVVAGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQL   74 (266)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~L~~~Q~~~L~~L~~   74 (266)
                      |++..|..+||+ +.|.+.+.....+.++.+...|+.+|+|+     ++.|.+...+..+..++..+.+.|+++++.+++
T Consensus        37 ~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~  116 (302)
T KOG2998|consen   37 TDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEE  116 (302)
T ss_pred             hcCCCCCcceeecchhhhhhhhhhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHH
Confidence            578899999999 78888888888888999999999999999     999999999999999999999999999999999


Q ss_pred             hhcccCCCCcHHHHHHHHHHHHHhCCCcccccchhhhHhHhcCCCCCCCCCCCcchhhHHhhHHHHHhhCcHHHHHHHHh
Q 024554           75 RIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRK  154 (266)
Q Consensus        75 ~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~s~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyFa~~~~~~~~~il~~  154 (266)
                      +.++|||.+|++|+++|++||+.++|++++++++|++|++|||||+||+|||||+|+|||+||+|||++||+.+++++.+
T Consensus       117 ~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~  196 (302)
T KOG2998|consen  117 LRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLK  196 (302)
T ss_pred             HHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCC-ccccccceeeccccchhhHHHHHHHHHHHHHHHHHhCCCChhcHH
Q 024554          155 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKP-RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN  233 (266)
Q Consensus       155 q~~~~~~~~yPFAvagINiT~~L~~~L~~~~~~~-~~~~~~~f~~ll~~~~~aF~eLy~~~f~~f~~~W~~~~at~mDF~  233 (266)
                      |.  ++.|+|||||||||||+|++++|+.++++. .++....|     +++.+|+.|||++|..||++|+++++||||||
T Consensus       197 s~--~~r~eYpfAVvgINIT~m~~qmL~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~simefn  269 (302)
T KOG2998|consen  197 SR--HPRWEYPFAVVGINITFMAIQMLDLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATIMEFN  269 (302)
T ss_pred             cC--CCccCCceEEEeecHHHHHHHHHHhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence            65  566999999999999999999999999844 44443333     78899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccccccccCCCccccccC
Q 024554          234 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR  266 (266)
Q Consensus       234 ~Vl~~~r~qL~r~L~~~~~~~i~~~~~~~~~~~  266 (266)
                      .|++++|.|++++|++.|+..+.|+|+|++|.+
T Consensus       270 ~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~~  302 (302)
T KOG2998|consen  270 TVLKSFRRQLERELSLDDVLLITDLPAFNLLLQ  302 (302)
T ss_pred             HHHHHHHHHHHHhhhhhhhcccccchhhhhhcC
Confidence            999999999999999999999999999999964

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=8.5e-50  Score=340.14  Aligned_cols=168  Identities=43%  Similarity=0.767  Sum_probs=152.4

Q ss_pred             HHHHHHHhhcccCCCCcHHHHHHHHHHHHHhCCCcccccchhhhHhHhcCCCCCCCCCCCcchhhHHhhHHHHHhhCcHH
Q 024554           68 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS  147 (266)
Q Consensus        68 ~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~s~~Wk~lGFQg~dP~TDFRg~GiLgL~~LlyFa~~~~~~  147 (266)
                      .|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeec-cccchhhHHHHHHHHHHHHHHHHHhCC
Q 024554          148 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDHQWLAMR  226 (266)
Q Consensus       148 ~~~il~~q~~~~~~~~yPFAvagINiT~~L~~~L~~~~~~~~~~~~~~f~~l-l~~~~~aF~eLy~~~f~~f~~~W~~~~  226 (266)
                      +++|+.++.++.+.++||||+||||||.+|+++|+++...+....  .+... +.+.+.+|++|||++|.+|+++|++++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~  159 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSEFYK--RINFLSFFSSLEAFEELFCACFQLFDRTWKEMN  159 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHHHhh--cccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence            999999988776678999999999999999999999766443332  22222 567789999999999999999999999


Q ss_pred             CChhcHHHHHH
Q 024554          227 ASYMDFNTVMK  237 (266)
Q Consensus       227 at~mDF~~Vl~  237 (266)
                      +|+|||++|++
T Consensus       160 at~~dF~~V~~  170 (170)
T PF04727_consen  160 ATIMDFNKVLK  170 (170)
T ss_pred             CCHHHHHhhcC
Confidence            99999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=100.00  E-value=3e-33  Score=269.52  Aligned_cols=201  Identities=27%  Similarity=0.494  Sum_probs=183.7

Q ss_pred             CCCcCCCHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHHHHHhCCCccc-----------ccchhhhHhHhcCCC-CCCC
Q 024554           56 RPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPS  123 (266)
Q Consensus        56 ~~~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~s~~Wk~lGFQg-~dP~  123 (266)
                      ...++|+.+|...+..+..|+.++.|+.+++..+.++++-..+|.++..           .....+..|.+||.. .||+
T Consensus       273 ~~~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa  352 (713)
T KOG2999|consen  273 ERPIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPA  352 (713)
T ss_pred             cchHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChH
Confidence            3346899999999999999999999999999999999999999987432           235678999999999 9999


Q ss_pred             CCCC--cchhhHHhhHHHHHhhCcHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeeccc
Q 024554          124 TDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLS  201 (266)
Q Consensus       124 TDFR--g~GiLgL~~LlyFa~~~~~~~~~il~~q~~~~~~~~yPFAvagINiT~~L~~~L~~~~~~~~~~~~~~f~~ll~  201 (266)
                      .||-  .+|+|+|+||+|||++||+.+.+++.++++|.++++|||+.++|.+|.|||++|+.+++  +......|.|+||
T Consensus       353 ~df~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--p~E~~~df~pmfF  430 (713)
T KOG2999|consen  353 QDFGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--PDELDRDFIPMFF  430 (713)
T ss_pred             HhcccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--chhhcCccceeee
Confidence            9998  89999999999999999999999999999999999999999999999999999999864  4455567999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHhCCCChhcHHHHHHHHHHHHHHhhcccccccccCCC
Q 024554          202 ENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP  259 (266)
Q Consensus       202 ~~~~aF~eLy~~~f~~f~~~W~~~~at~mDF~~Vl~~~r~qL~r~L~~~~~~~i~~~~  259 (266)
                      .++..|+++||+|.++|+++|++|+||-.||++|+.+||+||.|+|... .++++++-
T Consensus       431 thd~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk  487 (713)
T KOG2999|consen  431 THDTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK  487 (713)
T ss_pred             cCCCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence            9999999999999999999999999999999999999999999999865 77776653

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	266
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 55/254 (21%)

Query: 39  LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRAL---W 95
           L   +      R +        +   Q E L+RL              +   L  L    
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKS---------KPYENCLLVLLNVQ 254

Query: 96  NA----AFPDEELRDLISEQWKE-----MGWQGKDPSTDFRGGGFISLENLLYLARNFPK 146
           NA    AF +   + L++ ++K+             S D         E    L +    
Sbjct: 255 NAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 147 SFQDLLRKQEGDRSVWEYPFAVAGV-------NITFMLIQMLDLEAVKPRTMVGATFLKF 199
             QD L ++    +    P  ++ +         T+   + ++ + +    +   + L  
Sbjct: 314 RPQD-LPREVLTTN----PRRLSIIAESIRDGLATWDNWKHVNCDKLT-TII--ESSLNV 365

Query: 200 LSENE--SAFDLLYC------ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLED 251
           L   E    FD L        I   L+   W       +  + VM     +L +  L+E 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-----FDVIKSDVMVVV-NKLHKYSLVE- 418

Query: 252 VTRLEDLPSYSLLS 265
             +     + S+ S
Sbjct: 419 --KQPKESTISIPS 430

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00