Citrus Sinensis ID: 024678


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccc
cccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccEEEcHHHHHHHHHHHHHHHcHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcc
MFLITsifsplppslfikTMCVVNVVTMANLGyseikgkhlkyskfwnfnsdkssnnkeiKLSAKTGMLFLYTPSFLAGlasfwlfphegfRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQseglgeptidLKFLGMILFLLGISGNFYHHNLLSKMRrngekeykiptsglfdkvvcphYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKfedfpkhvksifpyif
MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWnfnsdkssnnKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
*FLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFN*********IKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYI*
**LITS*FSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
*FLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
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MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMIYVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query264 2.2.26 [Sep-21-2011]
Q2QDF6258 Steroid 5-alpha-reductase N/A no 0.636 0.651 0.285 2e-14
Q55C17300 Very-long-chain enoyl-CoA yes no 0.621 0.546 0.299 2e-13
Q9N5Y2308 Probable very-long-chain yes no 0.765 0.655 0.282 6e-12
P31213254 3-oxo-5-alpha-steroid 4-d yes no 0.799 0.830 0.275 1e-11
Q28892254 3-oxo-5-alpha-steroid 4-d N/A no 0.799 0.830 0.270 2e-11
P18405259 3-oxo-5-alpha-steroid 4-d no no 0.628 0.640 0.286 8e-11
Q68FF9255 3-oxo-5-alpha-steroid 4-d yes no 0.397 0.411 0.333 8e-11
Q9UT20282 Uncharacterized protein C yes no 0.458 0.429 0.280 9e-11
O18765254 3-oxo-5-alpha-steroid 4-d no no 0.420 0.437 0.357 1e-10
Q28891263 3-oxo-5-alpha-steroid 4-d N/A no 0.420 0.422 0.339 1e-10
>sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1 SV=1 Back     alignment and function desciption
 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 14/182 (7%)

Query: 95  LLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI--YVQSEGLGEPT 152
           LL S    H+F R V  L+  + +          +S++++     ++  Y+Q+  +    
Sbjct: 79  LLISPFLFHYFNRTV--LYPLRLARNTTQTRGFPVSVAFMAFGFNLLNGYLQARWVSHYK 136

Query: 153 ID--------LKFL-GMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPH 203
            D         +FL G+++F++G+  N     +L  +++ G+  YKIP  GLF+ V CP+
Sbjct: 137 DDYENEELFWWRFLAGLLIFVVGMWVNVRADKVLVGLKKQGDGGYKIPRGGLFELVSCPN 196

Query: 204 YLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKF-EDFPKHVKSIFPY 262
           Y  EI+ ++G   +  +   F + +     LM R+ ATR WYL KF +D+PK  K++ P+
Sbjct: 197 YFGEIMEWFGWAVMTWSWVGFGFFLYTCANLMPRARATRLWYLEKFKDDYPKDRKAVIPF 256

Query: 263 IF 264
           I+
Sbjct: 257 IY 258




Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide. Promotes cotton fibers (seed trichomes) initiation and elongation.
Gossypium hirsutum (taxid: 3635)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 2
>sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 Back     alignment and function description
>sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1 Back     alignment and function description
>sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1 Back     alignment and function description
>sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1 Back     alignment and function description
>sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1 Back     alignment and function description
>sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2 Back     alignment and function description
>sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9.08c PE=3 SV=1 Back     alignment and function description
>sp|O18765|S5A2_PIG 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scrofa GN=SRD5A2 PE=2 SV=2 Back     alignment and function description
>sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis GN=SRD5A1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query264
356499538266 PREDICTED: trans-2,3-enoyl-CoA reductase 0.988 0.981 0.617 3e-93
388518111268 unknown [Medicago truncatula] 0.965 0.951 0.614 7e-91
224113361268 predicted protein [Populus trichocarpa] 0.962 0.947 0.612 7e-90
255637551266 unknown [Glycine max] 0.977 0.969 0.613 1e-89
225461846259 PREDICTED: trans-2,3-enoyl-CoA reductase 0.943 0.961 0.632 6e-89
357497777270 3-oxo-5-alpha-steroid 4-dehydrogenase [M 0.965 0.944 0.621 1e-85
449506368266 PREDICTED: steroid 5-alpha-reductase DET 1.0 0.992 0.597 3e-85
224097510267 predicted protein [Populus trichocarpa] 0.988 0.977 0.596 6e-85
449434536268 PREDICTED: LOW QUALITY PROTEIN: steroid 1.0 0.985 0.597 7e-84
225449809258 PREDICTED: trans-2,3-enoyl-CoA reductase 0.935 0.957 0.596 4e-83
>gi|356499538|ref|XP_003518596.1| PREDICTED: trans-2,3-enoyl-CoA reductase-like [Glycine max] Back     alignment and taxonomy information
 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 166/269 (61%), Positives = 213/269 (79%), Gaps = 8/269 (2%)

Query: 1   MFLITSIFS---PLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNN 57
           M +++++FS   P P SL +  M V+++V++AN G+SEI+GKHL YSKFWN N    S  
Sbjct: 1   MVIMSALFSFIFPPPSSLVVSGMSVISLVSLANAGFSEIRGKHLNYSKFWNANP---SAE 57

Query: 58  KEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKY 117
           K++KLS+K GML LYTP+FLAGLASFW+FPH+G R  LL SA+T+HFFKR+ EV+FIHKY
Sbjct: 58  KQVKLSSKAGMLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKY 117

Query: 118 SSGMVLDSAIVISLSYLISTAAMIYVQ--SEGLGEPTIDLKFLGMILFLLGISGNFYHHN 175
           S  M+LDSAI I+LSY +STA MIY Q  ++GL EP IDL + G++LF++GI GNFYHH 
Sbjct: 118 SGAMLLDSAIPITLSYFLSTATMIYAQHLTQGLPEPPIDLLYPGIVLFVVGIIGNFYHHY 177

Query: 176 LLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLM 235
           LLS +R  GEKEYKIP  G+F+ V+CPHYLFEI+ F+G  FI+QTLYAF + +G T YL+
Sbjct: 178 LLSNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLL 237

Query: 236 GRSYATRAWYLSKFEDFPKHVKSIFPYIF 264
           GRSY+TR WYLSKFEDFPK VK+I P++F
Sbjct: 238 GRSYSTRKWYLSKFEDFPKDVKAIIPFVF 266




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518111|gb|AFK47117.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224113361|ref|XP_002316469.1| predicted protein [Populus trichocarpa] gi|222865509|gb|EEF02640.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255637551|gb|ACU19102.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225461846|ref|XP_002285664.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] Back     alignment and taxonomy information
>gi|357497777|ref|XP_003619177.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] gi|355494192|gb|AES75395.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449506368|ref|XP_004162730.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224097510|ref|XP_002310966.1| predicted protein [Populus trichocarpa] gi|222850786|gb|EEE88333.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434536|ref|XP_004135052.1| PREDICTED: LOW QUALITY PROTEIN: steroid 5-alpha-reductase DET2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225449809|ref|XP_002275776.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query264
TAIR|locus:2146112268 AT5G16010 "AT5G16010" [Arabido 1.0 0.985 0.552 4.1e-81
UNIPROTKB|Q2QDF6258 DET2 "Steroid 5-alpha-reductas 0.685 0.701 0.286 1.1e-16
DICTYBASE|DDB_G0270270300 gpsn2 "synaptic glycoprotein S 0.746 0.656 0.28 1.8e-16
ZFIN|ZDB-GENE-050417-199252 srd5a2a "steroid-5-alpha-reduc 0.761 0.797 0.270 2.9e-16
WB|WBGene00009635243 F42F12.3 [Caenorhabditis elega 0.784 0.851 0.268 1.3e-15
UNIPROTKB|F1NJM2257 LOC770453 "Uncharacterized pro 0.704 0.723 0.268 2e-15
UNIPROTKB|F1PEK6255 SRD5A1 "Uncharacterized protei 0.628 0.650 0.280 2e-15
WB|WBGene00000198308 art-1 [Caenorhabditis elegans 0.765 0.655 0.286 2.1e-15
UNIPROTKB|P31213254 SRD5A2 "3-oxo-5-alpha-steroid 0.768 0.799 0.280 2.6e-15
UNIPROTKB|F1NUW1257 SRD5A2 "Uncharacterized protei 0.416 0.428 0.380 6.9e-15
TAIR|locus:2146112 AT5G16010 "AT5G16010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
 Identities = 148/268 (55%), Positives = 199/268 (74%)

Query:     1 MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEI 60
             M ++TS   P PPS+ +  M VV V  +AN+G+SEI+G HLKYSKF   +S      +  
Sbjct:     1 MEMVTSFVYPPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKFGVSSSSPQPQKERF 60

Query:    61 -KLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSS 119
               +S++ GML LYTP+FLA  +SF++ P +  RF+LL SAL +HFFKR+ EVLFIHKYS 
Sbjct:    61 GSISSRNGMLLLYTPAFLAAASSFFVVPSDDLRFLLLKSALALHFFKRVFEVLFIHKYSG 120

Query:   120 GMVLDSAIVISLSYLISTAAMIYVQSEGLG--EPTIDLKFLGMILFLLGISGNFYHHNLL 177
             GM +DSA+ IS SY  STA M+Y Q+  LG  EP+ D+K  G+++F++GI GN YHH LL
Sbjct:   121 GMAIDSALTISSSYFSSTALMLYSQNLTLGLTEPSFDMKLAGVVMFVVGIVGNLYHHVLL 180

Query:   178 SKMRR-NGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMG 236
             +K+R+ +G+KEYKIP  GLFD ++CPHYLFEIL FW  F I+QT+Y+F +A+G   YL+G
Sbjct:   181 AKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIG 240

Query:   237 RSYATRAWYLSKFEDFPKHVKSIFPYIF 264
             RSYATR WYLSKF+DFPKH+K++ P++F
Sbjct:   241 RSYATRTWYLSKFDDFPKHIKALIPFVF 268




GO:0003865 "3-oxo-5-alpha-steroid 4-dehydrogenase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
UNIPROTKB|Q2QDF6 DET2 "Steroid 5-alpha-reductase DET2" [Gossypium hirsutum (taxid:3635)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270270 gpsn2 "synaptic glycoprotein SC2-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-199 srd5a2a "steroid-5-alpha-reductase, alpha polypeptide 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00009635 F42F12.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJM2 LOC770453 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEK6 SRD5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00000198 art-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P31213 SRD5A2 "3-oxo-5-alpha-steroid 4-dehydrogenase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUW1 SRD5A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_LG_X2215
hypothetical protein (269 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query264
pfam02544150 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-deh 2e-21
PLN02560308 PLN02560, PLN02560, enoyl-CoA reductase 1e-13
PLN03164323 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydr 9e-12
PLN02392260 PLN02392, PLN02392, probable steroid reductase DET 4e-10
COG3752272 COG3752, COG3752, Steroid 5-alpha reductase family 2e-04
pfam06966235 pfam06966, DUF1295, Protein of unknown function (D 0.001
>gnl|CDD|217095 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-dehydrogenase Back     alignment and domain information
 Score = 87.5 bits (217), Expect = 2e-21
 Identities = 40/113 (35%), Positives = 59/113 (52%)

Query: 152 TIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGF 211
           T     +G+ LF+ G+  N     +L  +R+ G   YKIP  GLF+ V CP+Y  EI+ +
Sbjct: 38  TDPRFLIGIGLFVTGMLINIKSDIILRTLRKPGNTGYKIPRGGLFELVSCPNYFGEIMEW 97

Query: 212 WGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 264
            G      +L A  +A      L  R+ A   WYL KFE +PK  K++ P++F
Sbjct: 98  IGYALATWSLPALAFAFFTVCNLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150


This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development. Length = 150

>gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase Back     alignment and domain information
>gnl|CDD|215610 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>gnl|CDD|178015 PLN02392, PLN02392, probable steroid reductase DET2 Back     alignment and domain information
>gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 264
KOG1638257 consensus Steroid reductase [Lipid transport and m 100.0
PLN02392260 probable steroid reductase DET2 100.0
PLN02560308 enoyl-CoA reductase 100.0
PLN03164323 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal 100.0
KOG1639297 consensus Steroid reductase required for elongatio 100.0
PF02544150 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase 100.0
KOG1640304 consensus Predicted steroid reductase [Lipid trans 100.0
PF06966235 DUF1295: Protein of unknown function (DUF1295); In 99.71
COG3752272 Steroid 5-alpha reductase family enzyme [General f 99.67
KOG4650311 consensus Predicted steroid reductase [General fun 99.09
PF01222432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 98.91
PF04191106 PEMT: Phospholipid methyltransferase ; InterPro: I 98.7
COG2020187 STE14 Putative protein-S-isoprenylcysteine methylt 98.54
KOG1435428 consensus Sterol reductase/lamin B receptor [Lipid 98.51
PF0414094 ICMT: Isoprenylcysteine carboxyl methyltransferase 97.85
KOG2628201 consensus Farnesyl cysteine-carboxyl methyltransfe 96.61
COG1755172 Uncharacterized protein conserved in bacteria [Fun 96.6
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=5.4e-65  Score=444.76  Aligned_cols=251  Identities=27%  Similarity=0.456  Sum_probs=208.4

Q ss_pred             ccCCCChhHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCcccCCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHhhc
Q 024678            7 IFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLF   86 (264)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~YGk~~~~~~~~~~~~~g~~i~~r~~w~~~~~p~~~~~~~~~~~~   86 (264)
                      +.++.+..+.+..+.+++++.++.....+.++  ++|||+.  ++.++ .++|  +|+|.+|++||.|+|+++++.+...
T Consensus         2 ~~~~~~~~il~~~~~~~~~~~~~~~~l~~~~k--s~yGr~s--~s~~~-~~~~--ip~~~aw~iqe~Paf~~pl~~~~~~   74 (257)
T KOG1638|consen    2 FVYPLREIILAGSWTLIGAGALAFLALKRQRK--SGYGRHS--SSLNP-TKTR--IPPRIAWFIQELPAFAIPLYSLFRG   74 (257)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHhhccc--cCCceec--CCCcc-hhcC--CCchhHHHHhcCcHHHhhHHHhcCC
Confidence            45677778888888888888888877766554  9999994  33222 2344  9999999999999999999876665


Q ss_pred             CCcc-hHHHHHHHHHHHHHHHHHHHHhhhccccCCcchhHHHHHHHHHHHHhhHhh-hhc-cCCCCCChhh--HHHHHHH
Q 024678           87 PHEG-FRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI-YVQ-SEGLGEPTID--LKFLGMI  161 (264)
Q Consensus        87 ~~~~-~~~~ll~~l~~iHy~~R~~e~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~-~~~-~~~~~~~~~~--~~~~g~~  161 (264)
                      ++++ .+..++.+++++||++|++|++|.+|.+++||+...+....+..+++.+.. |.+ .+...|+..+  +..+|+.
T Consensus        75 ~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~r~liG~~  154 (257)
T KOG1638|consen   75 PSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVALAIAFCTLNGTLQGLYLSHYQLYEDPWVTDIRFLIGVV  154 (257)
T ss_pred             CcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCchhHHHHHHHH
Confidence            6543 567899999999999999999999998888987766554444333322211 111 1222444433  6799999


Q ss_pred             HHHHHHHHHHHHHHHHHccccCCCcccccccccccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 024678          162 LFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYAT  241 (264)
Q Consensus       162 lf~~g~~~n~~~h~~L~~LR~~~~~~y~iP~gglF~~VscPnY~~Eil~w~g~al~~~~~~~~~f~~~~~~~l~~rA~~~  241 (264)
                      +|++|+++|.+||.+|++|||+++++||||+||+|+|||||||||||+||+|+|+++|+++++.|++++++|+.+||.++
T Consensus       155 lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~l~pRA~ah  234 (257)
T KOG1638|consen  155 LFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICNLGPRAYAH  234 (257)
T ss_pred             HHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCccCCCCcceeecccC
Q 024678          242 RAWYLSKFEDFPKHVKSIFPYIF  264 (264)
Q Consensus       242 h~wY~~kF~~yp~~RkalIPfI~  264 (264)
                      ||||+|||+||||+|||+||||+
T Consensus       235 H~WY~~kFe~YPk~RkAlIPfvf  257 (257)
T KOG1638|consen  235 HKWYLKKFEDYPKNRKALIPFVF  257 (257)
T ss_pred             HHHHHHhhccCCccceeeccccC
Confidence            99999999999999999999986



>PLN02392 probable steroid reductase DET2 Back     alignment and domain information
>PLN02560 enoyl-CoA reductase Back     alignment and domain information
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] Back     alignment and domain information
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 Back     alignment and domain information
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long Back     alignment and domain information
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>KOG4650 consensus Predicted steroid reductase [General function prediction only] Back     alignment and domain information
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 Back     alignment and domain information
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 Back     alignment and domain information
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query264
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 99.47
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Back     alignment and structure
Probab=99.47  E-value=1.4e-12  Score=112.25  Aligned_cols=110  Identities=14%  Similarity=0.203  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--CCCcccccccccccCcccccchhhHHHHHHHHHHHhhHHHHHHH--HH
Q 024678          154 DLKFLGMILFLLGISGNFYHHNLLSK-MRR--NGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCY--AI  228 (264)
Q Consensus       154 ~~~~~g~~lf~~g~~~n~~~h~~L~~-LR~--~~~~~y~iP~gglF~~VscPnY~~Eil~w~g~al~~~~~~~~~f--~~  228 (264)
                      ...++|+++++.|......+|.+|.+ .+.  +.+++.++.+.|+|++++||||+||++.|+|++++++++.+++.  ..
T Consensus        76 ~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s~~~~~~~~~~  155 (194)
T 4a2n_B           76 SIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVVLIFGIVA  155 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            35689999999999999999999954 443  33567899999999999999999999999999999988766542  22


Q ss_pred             HHHHHHHHHHHHHHHHHHHhC----ccCCCCcceeecccC
Q 024678          229 GVTFYLMGRSYATRAWYLSKF----EDFPKHVKSIFPYIF  264 (264)
Q Consensus       229 ~~~~~l~~rA~~~h~wY~~kF----~~yp~~RkalIPfI~  264 (264)
                      ++.. +..|....+++.+++|    +||.++++++||+|.
T Consensus       156 ~~~~-~~~ri~~EE~~L~~~fG~~Y~~Y~~rv~r~iP~i~  194 (194)
T 4a2n_B          156 WAIL-YFIRVPKEEELLIEEFGDEYIEYMGKTGRLFPKVV  194 (194)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHTHHHHHHHHHCBSSSCC--
T ss_pred             HHHH-HHHHHHHHHHHHHHHhCHHHHHHHHhCCeeCceeC
Confidence            3333 3356665666666666    457788889999974




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00