Citrus Sinensis ID: 024678
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| 356499538 | 266 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.988 | 0.981 | 0.617 | 3e-93 | |
| 388518111 | 268 | unknown [Medicago truncatula] | 0.965 | 0.951 | 0.614 | 7e-91 | |
| 224113361 | 268 | predicted protein [Populus trichocarpa] | 0.962 | 0.947 | 0.612 | 7e-90 | |
| 255637551 | 266 | unknown [Glycine max] | 0.977 | 0.969 | 0.613 | 1e-89 | |
| 225461846 | 259 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.943 | 0.961 | 0.632 | 6e-89 | |
| 357497777 | 270 | 3-oxo-5-alpha-steroid 4-dehydrogenase [M | 0.965 | 0.944 | 0.621 | 1e-85 | |
| 449506368 | 266 | PREDICTED: steroid 5-alpha-reductase DET | 1.0 | 0.992 | 0.597 | 3e-85 | |
| 224097510 | 267 | predicted protein [Populus trichocarpa] | 0.988 | 0.977 | 0.596 | 6e-85 | |
| 449434536 | 268 | PREDICTED: LOW QUALITY PROTEIN: steroid | 1.0 | 0.985 | 0.597 | 7e-84 | |
| 225449809 | 258 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.935 | 0.957 | 0.596 | 4e-83 |
| >gi|356499538|ref|XP_003518596.1| PREDICTED: trans-2,3-enoyl-CoA reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/269 (61%), Positives = 213/269 (79%), Gaps = 8/269 (2%)
Query: 1 MFLITSIFS---PLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNN 57
M +++++FS P P SL + M V+++V++AN G+SEI+GKHL YSKFWN N S
Sbjct: 1 MVIMSALFSFIFPPPSSLVVSGMSVISLVSLANAGFSEIRGKHLNYSKFWNANP---SAE 57
Query: 58 KEIKLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKY 117
K++KLS+K GML LYTP+FLAGLASFW+FPH+G R LL SA+T+HFFKR+ EV+FIHKY
Sbjct: 58 KQVKLSSKAGMLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKY 117
Query: 118 SSGMVLDSAIVISLSYLISTAAMIYVQ--SEGLGEPTIDLKFLGMILFLLGISGNFYHHN 175
S M+LDSAI I+LSY +STA MIY Q ++GL EP IDL + G++LF++GI GNFYHH
Sbjct: 118 SGAMLLDSAIPITLSYFLSTATMIYAQHLTQGLPEPPIDLLYPGIVLFVVGIIGNFYHHY 177
Query: 176 LLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLM 235
LLS +R GEKEYKIP G+F+ V+CPHYLFEI+ F+G FI+QTLYAF + +G T YL+
Sbjct: 178 LLSNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLL 237
Query: 236 GRSYATRAWYLSKFEDFPKHVKSIFPYIF 264
GRSY+TR WYLSKFEDFPK VK+I P++F
Sbjct: 238 GRSYSTRKWYLSKFEDFPKDVKAIIPFVF 266
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388518111|gb|AFK47117.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224113361|ref|XP_002316469.1| predicted protein [Populus trichocarpa] gi|222865509|gb|EEF02640.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255637551|gb|ACU19102.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225461846|ref|XP_002285664.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357497777|ref|XP_003619177.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] gi|355494192|gb|AES75395.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449506368|ref|XP_004162730.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224097510|ref|XP_002310966.1| predicted protein [Populus trichocarpa] gi|222850786|gb|EEE88333.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449434536|ref|XP_004135052.1| PREDICTED: LOW QUALITY PROTEIN: steroid 5-alpha-reductase DET2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225449809|ref|XP_002275776.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 264 | ||||||
| TAIR|locus:2146112 | 268 | AT5G16010 "AT5G16010" [Arabido | 1.0 | 0.985 | 0.552 | 4.1e-81 | |
| UNIPROTKB|Q2QDF6 | 258 | DET2 "Steroid 5-alpha-reductas | 0.685 | 0.701 | 0.286 | 1.1e-16 | |
| DICTYBASE|DDB_G0270270 | 300 | gpsn2 "synaptic glycoprotein S | 0.746 | 0.656 | 0.28 | 1.8e-16 | |
| ZFIN|ZDB-GENE-050417-199 | 252 | srd5a2a "steroid-5-alpha-reduc | 0.761 | 0.797 | 0.270 | 2.9e-16 | |
| WB|WBGene00009635 | 243 | F42F12.3 [Caenorhabditis elega | 0.784 | 0.851 | 0.268 | 1.3e-15 | |
| UNIPROTKB|F1NJM2 | 257 | LOC770453 "Uncharacterized pro | 0.704 | 0.723 | 0.268 | 2e-15 | |
| UNIPROTKB|F1PEK6 | 255 | SRD5A1 "Uncharacterized protei | 0.628 | 0.650 | 0.280 | 2e-15 | |
| WB|WBGene00000198 | 308 | art-1 [Caenorhabditis elegans | 0.765 | 0.655 | 0.286 | 2.1e-15 | |
| UNIPROTKB|P31213 | 254 | SRD5A2 "3-oxo-5-alpha-steroid | 0.768 | 0.799 | 0.280 | 2.6e-15 | |
| UNIPROTKB|F1NUW1 | 257 | SRD5A2 "Uncharacterized protei | 0.416 | 0.428 | 0.380 | 6.9e-15 |
| TAIR|locus:2146112 AT5G16010 "AT5G16010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 148/268 (55%), Positives = 199/268 (74%)
Query: 1 MFLITSIFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEI 60
M ++TS P PPS+ + M VV V +AN+G+SEI+G HLKYSKF +S +
Sbjct: 1 MEMVTSFVYPPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKFGVSSSSPQPQKERF 60
Query: 61 -KLSAKTGMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSS 119
+S++ GML LYTP+FLA +SF++ P + RF+LL SAL +HFFKR+ EVLFIHKYS
Sbjct: 61 GSISSRNGMLLLYTPAFLAAASSFFVVPSDDLRFLLLKSALALHFFKRVFEVLFIHKYSG 120
Query: 120 GMVLDSAIVISLSYLISTAAMIYVQSEGLG--EPTIDLKFLGMILFLLGISGNFYHHNLL 177
GM +DSA+ IS SY STA M+Y Q+ LG EP+ D+K G+++F++GI GN YHH LL
Sbjct: 121 GMAIDSALTISSSYFSSTALMLYSQNLTLGLTEPSFDMKLAGVVMFVVGIVGNLYHHVLL 180
Query: 178 SKMRR-NGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMG 236
+K+R+ +G+KEYKIP GLFD ++CPHYLFEIL FW F I+QT+Y+F +A+G YL+G
Sbjct: 181 AKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIG 240
Query: 237 RSYATRAWYLSKFEDFPKHVKSIFPYIF 264
RSYATR WYLSKF+DFPKH+K++ P++F
Sbjct: 241 RSYATRTWYLSKFDDFPKHIKALIPFVF 268
|
|
| UNIPROTKB|Q2QDF6 DET2 "Steroid 5-alpha-reductase DET2" [Gossypium hirsutum (taxid:3635)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0270270 gpsn2 "synaptic glycoprotein SC2-like protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050417-199 srd5a2a "steroid-5-alpha-reductase, alpha polypeptide 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00009635 F42F12.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NJM2 LOC770453 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEK6 SRD5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00000198 art-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P31213 SRD5A2 "3-oxo-5-alpha-steroid 4-dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NUW1 SRD5A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_LG_X2215 | hypothetical protein (269 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 264 | |||
| pfam02544 | 150 | pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-deh | 2e-21 | |
| PLN02560 | 308 | PLN02560, PLN02560, enoyl-CoA reductase | 1e-13 | |
| PLN03164 | 323 | PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydr | 9e-12 | |
| PLN02392 | 260 | PLN02392, PLN02392, probable steroid reductase DET | 4e-10 | |
| COG3752 | 272 | COG3752, COG3752, Steroid 5-alpha reductase family | 2e-04 | |
| pfam06966 | 235 | pfam06966, DUF1295, Protein of unknown function (D | 0.001 |
| >gnl|CDD|217095 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-dehydrogenase | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 2e-21
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 152 TIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGF 211
T +G+ LF+ G+ N +L +R+ G YKIP GLF+ V CP+Y EI+ +
Sbjct: 38 TDPRFLIGIGLFVTGMLINIKSDIILRTLRKPGNTGYKIPRGGLFELVSCPNYFGEIMEW 97
Query: 212 WGIFFIAQTLYAFCYAIGVTFYLMGRSYATRAWYLSKFEDFPKHVKSIFPYIF 264
G +L A +A L R+ A WYL KFE +PK K++ P++F
Sbjct: 98 IGYALATWSLPALAFAFFTVCNLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
|
This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development. Length = 150 |
| >gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase | Back alignment and domain information |
|---|
| >gnl|CDD|215610 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178015 PLN02392, PLN02392, probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 100.0 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 100.0 | |
| PLN02560 | 308 | enoyl-CoA reductase | 100.0 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 100.0 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 100.0 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 100.0 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 100.0 | |
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 99.71 | |
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 99.67 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 99.09 | |
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 98.91 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 98.7 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 98.54 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 98.51 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 97.85 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 96.61 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 96.6 |
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-65 Score=444.76 Aligned_cols=251 Identities=27% Similarity=0.456 Sum_probs=208.4
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCcccCCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHhhc
Q 024678 7 IFSPLPPSLFIKTMCVVNVVTMANLGYSEIKGKHLKYSKFWNFNSDKSSNNKEIKLSAKTGMLFLYTPSFLAGLASFWLF 86 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~YGk~~~~~~~~~~~~~g~~i~~r~~w~~~~~p~~~~~~~~~~~~ 86 (264)
+.++.+..+.+..+.+++++.++.....+.++ ++|||+. ++.++ .++| +|+|.+|++||.|+|+++++.+...
T Consensus 2 ~~~~~~~~il~~~~~~~~~~~~~~~~l~~~~k--s~yGr~s--~s~~~-~~~~--ip~~~aw~iqe~Paf~~pl~~~~~~ 74 (257)
T KOG1638|consen 2 FVYPLREIILAGSWTLIGAGALAFLALKRQRK--SGYGRHS--SSLNP-TKTR--IPPRIAWFIQELPAFAIPLYSLFRG 74 (257)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHhhccc--cCCceec--CCCcc-hhcC--CCchhHHHHhcCcHHHhhHHHhcCC
Confidence 45677778888888888888888877766554 9999994 33222 2344 9999999999999999999876665
Q ss_pred CCcc-hHHHHHHHHHHHHHHHHHHHHhhhccccCCcchhHHHHHHHHHHHHhhHhh-hhc-cCCCCCChhh--HHHHHHH
Q 024678 87 PHEG-FRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI-YVQ-SEGLGEPTID--LKFLGMI 161 (264)
Q Consensus 87 ~~~~-~~~~ll~~l~~iHy~~R~~e~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~-~~~-~~~~~~~~~~--~~~~g~~ 161 (264)
++++ .+..++.+++++||++|++|++|.+|.+++||+...+....+..+++.+.. |.+ .+...|+..+ +..+|+.
T Consensus 75 ~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~r~liG~~ 154 (257)
T KOG1638|consen 75 PSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVALAIAFCTLNGTLQGLYLSHYQLYEDPWVTDIRFLIGVV 154 (257)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCchhHHHHHHHH
Confidence 6543 567899999999999999999999998888987766554444333322211 111 1222444433 6799999
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCcccccccccccCcccccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 024678 162 LFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCYAIGVTFYLMGRSYAT 241 (264)
Q Consensus 162 lf~~g~~~n~~~h~~L~~LR~~~~~~y~iP~gglF~~VscPnY~~Eil~w~g~al~~~~~~~~~f~~~~~~~l~~rA~~~ 241 (264)
+|++|+++|.+||.+|++|||+++++||||+||+|+|||||||||||+||+|+|+++|+++++.|++++++|+.+||.++
T Consensus 155 lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~l~pRA~ah 234 (257)
T KOG1638|consen 155 LFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICNLGPRAYAH 234 (257)
T ss_pred HHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCccCCCCcceeecccC
Q 024678 242 RAWYLSKFEDFPKHVKSIFPYIF 264 (264)
Q Consensus 242 h~wY~~kF~~yp~~RkalIPfI~ 264 (264)
||||+|||+||||+|||+||||+
T Consensus 235 H~WY~~kFe~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 235 HKWYLKKFEDYPKNRKALIPFVF 257 (257)
T ss_pred HHHHHHhhccCCccceeeccccC
Confidence 99999999999999999999986
|
|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
|---|
| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 264 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.47 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-12 Score=112.25 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--CCCcccccccccccCcccccchhhHHHHHHHHHHHhhHHHHHHH--HH
Q 024678 154 DLKFLGMILFLLGISGNFYHHNLLSK-MRR--NGEKEYKIPTSGLFDKVVCPHYLFEILGFWGIFFIAQTLYAFCY--AI 228 (264)
Q Consensus 154 ~~~~~g~~lf~~g~~~n~~~h~~L~~-LR~--~~~~~y~iP~gglF~~VscPnY~~Eil~w~g~al~~~~~~~~~f--~~ 228 (264)
...++|+++++.|......+|.+|.+ .+. +.+++.++.+.|+|++++||||+||++.|+|++++++++.+++. ..
T Consensus 76 ~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s~~~~~~~~~~ 155 (194)
T 4a2n_B 76 SIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVVLIFGIVA 155 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 35689999999999999999999954 443 33567899999999999999999999999999999988766542 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----ccCCCCcceeecccC
Q 024678 229 GVTFYLMGRSYATRAWYLSKF----EDFPKHVKSIFPYIF 264 (264)
Q Consensus 229 ~~~~~l~~rA~~~h~wY~~kF----~~yp~~RkalIPfI~ 264 (264)
++.. +..|....+++.+++| +||.++++++||+|.
T Consensus 156 ~~~~-~~~ri~~EE~~L~~~fG~~Y~~Y~~rv~r~iP~i~ 194 (194)
T 4a2n_B 156 WAIL-YFIRVPKEEELLIEEFGDEYIEYMGKTGRLFPKVV 194 (194)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHTHHHHHHHHHCBSSSCC--
T ss_pred HHHH-HHHHHHHHHHHHHHHhCHHHHHHHHhCCeeCceeC
Confidence 3333 3356665666666666 457788889999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00