Citrus Sinensis ID: 024713

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
MWGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
ccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccEEEccccccccccHHHHHHHHHHHHHHHcccccccEEEEcHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHcccccEEEEccccccHHHHHcccccccccEEEEEEEcccccEEEEEcc
cccHHHHHHHHHHHHHccHHHcccccccccccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccccccccEEEHHHHHHHHHcccEEEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHccccccccccccccccccccccccccHHcHHHccccHHHHHHHHcccccHHcccccccHHHHccccHHHHHEEEEEEcccccccEEEEEEc
MWGYLWIPILFSLSKEFSSVEAQskillpsqrqrqqndavsslsvlvprcpvpdsklnyrpvigivthpgdgasgrlnnatNASYIAASYVKFVESagarvipliynepedvLFEKLELVNGvlytggwakdgLYYAIVEKVFKKILekndagdhfplyaHCLGFELLTMIISKDKNILESFNAADQASTLQFMEntsiegtvfqrfppkliKKLSTDCLVmqnhhygispetlRKNLDLSRFFKMLTTsadednkckpmtil
MWGYLWIPILFSLSKEFSSVEAQSKIllpsqrqrqqNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVThpgdgasgrLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHhygispetlrkNLDLSRFFKMlttsadednkckpmtil
MWGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
*WGYLWIPILFSLSKEF*************************LSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKML****************
*WGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRC******LNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
MWGYLWIPILFSLSKEFSSVEAQSKILLP************SLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
MWGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query263 2.2.26 [Sep-21-2011]
O65355347 Gamma-glutamyl hydrolase yes no 0.965 0.731 0.596 9e-92
P93164342 Gamma-glutamyl hydrolase no no 0.878 0.675 0.539 4e-67
Q54LN4317 Gamma-glutamyl hydrolase yes no 0.771 0.640 0.331 3e-33
Q54HL4 347 Gamma-glutamyl hydrolase no no 0.741 0.561 0.356 4e-31
Q9Z0L8317 Gamma-glutamyl hydrolase yes no 0.752 0.624 0.375 4e-28
Q62867317 Gamma-glutamyl hydrolase yes no 0.707 0.586 0.367 4e-24
Q92820318 Gamma-glutamyl hydrolase yes no 0.730 0.603 0.336 1e-21
A7YWG4318 Gamma-glutamyl hydrolase yes no 0.695 0.575 0.355 2e-20
>sp|O65355|GGH_ARATH Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2 Back     alignment and function desciption
 Score =  336 bits (862), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 157/263 (59%), Positives = 205/263 (77%), Gaps = 9/263 (3%)

Query: 1   MWGYLWIPIL-FSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNY 59
           MW Y+W+P++  SL K+   +   + ILLPSQ     + +        P C  PD  LNY
Sbjct: 1   MWSYVWLPLVALSLFKDSIIMAKAATILLPSQTGFDISRS--------PVCSAPDPNLNY 52

Query: 60  RPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLEL 119
           RPVIGI++HPGDGASGRL+NAT+AS IAASYVK  ES GARVIPLI+NEPE++LF+KLEL
Sbjct: 53  RPVIGILSHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLEL 112

Query: 120 VNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNIL 179
           VNGV+ TGGWAK+GLY+ IV+K+F K+LE+NDAG+HFP+YA CLGFELLTMIIS++++I 
Sbjct: 113 VNGVILTGGWAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMIISQNRDIF 172

Query: 180 ESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLD 239
           E  +A + AS+LQF+EN +I+GT+FQRFPP+L+KKL TDCLVMQNH +GISP++   N+ 
Sbjct: 173 EKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRFGISPQSFEGNIA 232

Query: 240 LSRFFKMLTTSADEDNKCKPMTI 262
           LS FFK++TT  D++ K    T+
Sbjct: 233 LSNFFKIVTTCVDDNGKVYVSTV 255
Has endopeptidase activity against 4-amino-10-methylpteroyl penta-, tetra-, tri- and di-gamma-L-glutamate substrates and is responsible for the production of folic acid, pteglu from teroylpolyglutamates.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 9
>sp|P93164|GGH_SOYBN Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q54LN4|GGHA_DICDI Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum GN=gghA PE=3 SV=1 Back     alignment and function description
>sp|Q54HL4|GGHB_DICDI Gamma-glutamyl hydrolase B OS=Dictyostelium discoideum GN=gghB PE=3 SV=1 Back     alignment and function description
>sp|Q9Z0L8|GGH_MOUSE Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE=1 SV=2 Back     alignment and function description
>sp|Q62867|GGH_RAT Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=Ggh PE=1 SV=1 Back     alignment and function description
>sp|Q92820|GGH_HUMAN Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2 Back     alignment and function description
>sp|A7YWG4|GGH_BOVIN Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
255567082 388 Gamma-glutamyl hydrolase precursor, puta 0.958 0.649 0.751 1e-110
302142873 514 unnamed protein product [Vitis vinifera] 0.946 0.484 0.718 1e-104
225461732 384 PREDICTED: gamma-glutamyl hydrolase [Vit 0.946 0.648 0.718 1e-104
224104165304 predicted protein [Populus trichocarpa] 0.965 0.835 0.685 1e-103
224117460 367 predicted protein [Populus trichocarpa] 0.965 0.692 0.677 1e-102
449456571 375 PREDICTED: gamma-glutamyl hydrolase-like 0.931 0.653 0.648 5e-93
449518069 433 PREDICTED: LOW QUALITY PROTEIN: gamma-gl 0.931 0.565 0.648 6e-93
224122254327 predicted protein [Populus trichocarpa] 0.821 0.660 0.736 1e-91
357452059341 Gamma-glutamylhydrolase [Medicago trunca 0.901 0.695 0.658 3e-91
297789369347 gamma-glutamyl hydrolase 2 [Arabidopsis 0.965 0.731 0.600 2e-90
>gi|255567082|ref|XP_002524523.1| Gamma-glutamyl hydrolase precursor, putative [Ricinus communis] gi|223536197|gb|EEF37850.1| Gamma-glutamyl hydrolase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/270 (75%), Positives = 221/270 (81%), Gaps = 18/270 (6%)

Query: 1   MWGYLWIPILFSLSKEFSSVEAQ--------SKILLPSQRQRQQNDAVSSLSVLVPRCPV 52
           MW YLWIPIL SLSKE S  +A         S ILLPSQ   +           VPRC  
Sbjct: 41  MWNYLWIPILISLSKELSLAKASRSNINSNNSNILLPSQLDDEP----------VPRCLA 90

Query: 53  PDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDV 112
           PD KLNYRPVIGIV+HPGDGASGRL+NATNASYIAASYVKFVESAGARVIPLIYNEP D+
Sbjct: 91  PDPKLNYRPVIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVIPLIYNEPPDI 150

Query: 113 LFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMII 172
           LFEKL LVNGVL+TGGWAK+GLYY IV+ +FKK+L+KNDAG HFPLYA CLGFELLTMII
Sbjct: 151 LFEKLNLVNGVLFTGGWAKNGLYYDIVKAIFKKVLDKNDAGYHFPLYAICLGFELLTMII 210

Query: 173 SKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPE 232
           SKD+NILESFNAADQASTLQFM N +IEGTVFQRFPP L+KKLSTDCLVMQNHHYGISPE
Sbjct: 211 SKDRNILESFNAADQASTLQFMGNINIEGTVFQRFPPGLLKKLSTDCLVMQNHHYGISPE 270

Query: 233 TLRKNLDLSRFFKMLTTSADEDNKCKPMTI 262
            L++N DLS FFK+LTTSAD DNK    T+
Sbjct: 271 RLQENQDLSGFFKILTTSADADNKVYVSTV 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142873|emb|CBI20168.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461732|ref|XP_002285525.1| PREDICTED: gamma-glutamyl hydrolase [Vitis vinifera] Back     alignment and taxonomy information
>gi|224104165|ref|XP_002333977.1| predicted protein [Populus trichocarpa] gi|222839427|gb|EEE77764.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117460|ref|XP_002331718.1| predicted protein [Populus trichocarpa] gi|222874324|gb|EEF11455.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449456571|ref|XP_004146022.1| PREDICTED: gamma-glutamyl hydrolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449518069|ref|XP_004166066.1| PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyl hydrolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224122254|ref|XP_002318789.1| predicted protein [Populus trichocarpa] gi|222859462|gb|EEE97009.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357452059|ref|XP_003596306.1| Gamma-glutamylhydrolase [Medicago truncatula] gi|355485354|gb|AES66557.1| Gamma-glutamylhydrolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297789369|ref|XP_002862660.1| gamma-glutamyl hydrolase 2 [Arabidopsis lyrata subsp. lyrata] gi|297308311|gb|EFH38918.1| gamma-glutamyl hydrolase 2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query263
TAIR|locus:2037603347 GGH2 "gamma-glutamyl hydrolase 0.965 0.731 0.604 1.5e-83
TAIR|locus:2037573352 GGH3 "gamma-glutamyl hydrolase 0.980 0.732 0.581 4.2e-79
TAIR|locus:2037583348 GGH1 "gamma-glutamyl hydrolase 0.889 0.672 0.611 1.3e-75
UNIPROTKB|P93164342 P93164 "Gamma-glutamyl hydrola 0.870 0.669 0.543 2.1e-61
DICTYBASE|DDB_G0286535317 gghA "peptidase C26 family pro 0.771 0.640 0.331 4.7e-32
DICTYBASE|DDB_G0289365 347 gghB "peptidase C26 family pro 0.733 0.556 0.36 2e-31
ZFIN|ZDB-GENE-040426-2615312 ggh "gamma-glutamyl hydrolase 0.745 0.628 0.381 1.4e-30
MGI|MGI:1329035317 Ggh "gamma-glutamyl hydrolase" 0.707 0.586 0.387 7.1e-29
UNIPROTKB|F1RTA3318 GGH "Uncharacterized protein" 0.703 0.581 0.368 1.1e-25
RGD|2682317 Ggh "gamma-glutamyl hydrolase 0.707 0.586 0.372 1.4e-25
TAIR|locus:2037603 GGH2 "gamma-glutamyl hydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 159/263 (60%), Positives = 205/263 (77%)

Query:     1 MWGYLWIPIL-FSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNY 59
             MW Y+W+P++  SL K+   +   + ILLPSQ      D   S     P C  PD  LNY
Sbjct:     1 MWSYVWLPLVALSLFKDSIIMAKAATILLPSQTGF---DISRS-----PVCSAPDPNLNY 52

Query:    60 RPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLEL 119
             RPVIGI++HPGDGASGRL+NAT+AS IAASYVK  ES GARVIPLI+NEPE++LF+KLEL
Sbjct:    53 RPVIGILSHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLEL 112

Query:   120 VNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNIL 179
             VNGV+ TGGWAK+GLY+ IV+K+F K+LE+NDAG+HFP+YA CLGFELLTMIIS++++I 
Sbjct:   113 VNGVILTGGWAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMIISQNRDIF 172

Query:   180 ESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLD 239
             E  +A + AS+LQF+EN +I+GT+FQRFPP+L+KKL TDCLVMQNH +GISP++   N+ 
Sbjct:   173 EKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRFGISPQSFEGNIA 232

Query:   240 LSRFFKMLTTSADEDNKCKPMTI 262
             LS FFK++TT  D++ K    T+
Sbjct:   233 LSNFFKIVTTCVDDNGKVYVSTV 255
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006541 "glutamine metabolic process" evidence=IEA
GO:0008242 "omega peptidase activity" evidence=IEA;IDA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0046900 "tetrahydrofolylpolyglutamate metabolic process" evidence=IDA
GO:0006833 "water transport" evidence=RCA
GO:0006970 "response to osmotic stress" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
TAIR|locus:2037573 GGH3 "gamma-glutamyl hydrolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037583 GGH1 "gamma-glutamyl hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P93164 P93164 "Gamma-glutamyl hydrolase" [Glycine max (taxid:3847)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286535 gghA "peptidase C26 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289365 gghB "peptidase C26 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2615 ggh "gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1329035 Ggh "gamma-glutamyl hydrolase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1RTA3 GGH "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|2682 Ggh "gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65355GGH_ARATH3, ., 4, ., 1, 9, ., 90.59690.96570.7319yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.19.90.914
3rd Layer3.4.190.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
cd01747273 cd01747, GATase1_Glutamyl_Hydrolase, Type 1 glutam 1e-84
pfam07722219 pfam07722, Peptidase_C26, Peptidase C26 1e-39
cd01745189 cd01745, GATase1_2, Subgroup of proteins having th 2e-04
cd0312892 cd03128, GAT_1, Type 1 glutamine amidotransferase 0.004
>gnl|CDD|153218 cd01747, GATase1_Glutamyl_Hydrolase, Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information 
 Score =  253 bits (648), Expect = 1e-84
 Identities = 89/196 (45%), Positives = 124/196 (63%), Gaps = 6/196 (3%)

Query: 63  IGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNG 122
           IGI+T P DGA    +N T  SYIAASYVKF+ESAGARV+P+  NE E+   +  + +NG
Sbjct: 1   IGILTQPVDGAG---SNKTGHSYIAASYVKFLESAGARVVPIWINESEEYYDKLFKSING 57

Query: 123 VLYTGGWA--KDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILE 180
           +L+ GG        Y    + ++   LE+NDAGD+FP++  CLGFELLT + S +  +LE
Sbjct: 58  ILFPGGAVDIDTSGYARTAKIIYNLALERNDAGDYFPVWGTCLGFELLTYLTSGETLLLE 117

Query: 181 SFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDL 240
           +  A + A  L F    +++  +F+RFPP L+K L+T+ L M NH YGISPE   +N  L
Sbjct: 118 ATEATNSALPLNF-TEDALQSRLFKRFPPDLLKSLATEPLTMNNHRYGISPENFTENGLL 176

Query: 241 SRFFKMLTTSADEDNK 256
           S FF +LTT+ D +  
Sbjct: 177 SDFFNVLTTNDDWNGV 192

Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. Length = 273
>gnl|CDD|219535 pfam07722, Peptidase_C26, Peptidase C26 Back     alignment and domain information
>gnl|CDD|153216 cd01745, GATase1_2, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 263
KOG1559340 consensus Gamma-glutamyl hydrolase [Coenzyme trans 100.0
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 100.0
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 99.97
COG2071243 Predicted glutamine amidotransferases [General fun 99.93
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 99.89
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.85
PRK08007187 para-aminobenzoate synthase component II; Provisio 99.81
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 99.81
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.81
PRK06895190 putative anthranilate synthase component II; Provi 99.81
PRK05637208 anthranilate synthase component II; Provisional 99.81
PRK06774191 para-aminobenzoate synthase component II; Provisio 99.81
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 99.8
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 99.8
PRK07765214 para-aminobenzoate synthase component II; Provisio 99.8
PRK05670189 anthranilate synthase component II; Provisional 99.79
PRK08857193 para-aminobenzoate synthase component II; Provisio 99.79
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 99.79
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 99.78
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 99.78
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 99.77
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 99.77
PLN02335222 anthranilate synthase 99.77
PRK12564360 carbamoyl phosphate synthase small subunit; Review 99.76
CHL00101190 trpG anthranilate synthase component 2 99.76
PRK00758184 GMP synthase subunit A; Validated 99.75
PLN02347 536 GMP synthetase 99.75
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 99.75
PRK09065237 glutamine amidotransferase; Provisional 99.73
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 99.73
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 99.72
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.7
PRK00074 511 guaA GMP synthase; Reviewed 99.7
PRK13566720 anthranilate synthase; Provisional 99.7
PRK07567242 glutamine amidotransferase; Provisional 99.7
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 99.7
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 99.68
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 99.67
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 99.66
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.65
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 99.64
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 99.64
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.63
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.63
PRK12838354 carbamoyl phosphate synthase small subunit; Review 99.63
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.62
PRK07053234 glutamine amidotransferase; Provisional 99.62
PRK06490239 glutamine amidotransferase; Provisional 99.62
PRK05665240 amidotransferase; Provisional 99.61
PRK08250235 glutamine amidotransferase; Provisional 99.6
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.6
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.59
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.59
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.58
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.58
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.57
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 99.54
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 99.52
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.49
PRK06186229 hypothetical protein; Validated 99.49
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 99.48
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 99.46
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.46
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 99.45
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.41
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 99.41
PRK05380533 pyrG CTP synthetase; Validated 99.36
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.36
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.32
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 99.26
KOG0026223 consensus Anthranilate synthase, beta chain [Amino 99.25
PLN02327557 CTP synthase 99.24
KOG1224 767 consensus Para-aminobenzoate (PABA) synthase ABZ1 99.23
KOG1622 552 consensus GMP synthase [Nucleotide transport and m 99.23
KOG0623 541 consensus Glutamine amidotransferase/cyclase [Amin 99.2
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 99.16
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 99.15
KOG3179245 consensus Predicted glutamine synthetase [Nucleoti 99.11
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 99.09
PRK05368302 homoserine O-succinyltransferase; Provisional 99.03
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 99.01
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 98.98
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 98.81
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 98.79
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 98.75
KOG2387585 consensus CTP synthase (UTP-ammonia lyase) [Nucleo 98.71
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 98.62
COG0311194 PDX2 Predicted glutamine amidotransferase involved 98.61
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 98.56
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 98.42
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 98.38
cd03131175 GATase1_HTS Type 1 glutamine amidotransferase (GAT 98.37
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 98.32
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 98.31
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 98.28
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 98.26
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 98.15
PRK00784488 cobyric acid synthase; Provisional 98.11
PHA033661304 FGAM-synthase; Provisional 98.09
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 98.07
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 98.06
cd0312892 GAT_1 Type 1 glutamine amidotransferase (GATase1)- 98.04
KOG3210226 consensus Imidazoleglycerol-phosphate synthase sub 97.86
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 97.73
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 97.73
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 97.67
cd03133213 GATase1_ES1 Type 1 glutamine amidotransferase (GAT 97.57
PF04204298 HTS: Homoserine O-succinyltransferase ; InterPro: 97.56
PRK11780217 isoprenoid biosynthesis protein with amidotransfer 97.5
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 97.49
PRK05282233 (alpha)-aspartyl dipeptidase; Validated 97.49
cd03169180 GATase1_PfpI_1 Type 1 glutamine amidotransferase ( 97.47
TIGR00313475 cobQ cobyric acid synthase CobQ. 97.45
TIGR01382166 PfpI intracellular protease, PfpI family. The memb 97.4
PRK04155287 chaperone protein HchA; Provisional 97.36
cd03147231 GATase1_Ydr533c_like Type 1 glutamine amidotransfe 97.23
cd03134165 GATase1_PfpI_like A type 1 glutamine amidotransfer 97.22
TIGR01001300 metA homoserine O-succinyltransferase. The apparen 97.11
cd03148232 GATase1_EcHsp31_like Type 1 glutamine amidotransfe 97.07
COG0693188 ThiJ Putative intracellular protease/amidase [Gene 96.96
cd03129210 GAT1_Peptidase_E_like Type 1 glutamine amidotransf 96.93
cd03132142 GATase1_catalase Type 1 glutamine amidotransferase 96.93
PF01965147 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T 96.72
PRK11574196 oxidative-stress-resistance chaperone; Provisional 96.51
cd03137187 GATase1_AraC_1 AraC transcriptional regulators hav 96.45
cd03140170 GATase1_PfpI_3 Type 1 glutamine amidotransferase ( 96.4
cd03135163 GATase1_DJ-1 Type 1 glutamine amidotransferase (GA 96.39
COG3442250 Predicted glutamine amidotransferase [General func 96.23
cd03139183 GATase1_PfpI_2 Type 1 glutamine amidotransferase ( 96.02
PF03575154 Peptidase_S51: Peptidase family S51; InterPro: IPR 95.73
PRK11249752 katE hydroperoxidase II; Provisional 95.69
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 95.59
cd03141221 GATase1_Hsp31_like Type 1 glutamine amidotransfera 95.46
cd03138195 GATase1_AraC_2 AraC transcriptional regulators hav 95.38
COG1897307 MetA Homoserine trans-succinylase [Amino acid tran 95.2
TIGR02069250 cyanophycinase cyanophycinase. This model describe 95.13
COG1797451 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme 95.09
cd03145217 GAT1_cyanophycinase Type 1 glutamine amidotransfer 94.98
TIGR01383179 not_thiJ DJ-1 family protein. This model represent 94.53
cd03136185 GATase1_AraC_ArgR_like AraC transcriptional regula 94.41
KOG19071320 consensus Phosphoribosylformylglycinamidine syntha 94.21
PRK09393 322 ftrA transcriptional activator FtrA; Provisional 93.95
KOG2764247 consensus Putative transcriptional regulator DJ-1 93.26
PF13278166 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M 93.07
COG3340224 PepE Peptidase E [Amino acid transport and metabol 92.61
PRK03372 306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.23
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.65
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.56
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.43
PRK02649 305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.95
COG4285253 Uncharacterized conserved protein [Function unknow 87.4
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 86.23
PF09825 367 BPL_N: Biotin-protein ligase, N terminal; InterPro 85.67
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 84.52
PF03358152 FMN_red: NADPH-dependent FMN reductase; InterPro: 84.46
COG0303404 MoeA Molybdopterin biosynthesis enzyme [Coenzyme m 84.32
COG0655207 WrbA Multimeric flavodoxin WrbA [General function 82.65
PRK01231 295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.37
PRK01215264 competence damage-inducible protein A; Provisional 81.45
TIGR02667163 moaB_proteo molybdenum cofactor biosynthesis prote 80.73
>KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-56  Score=389.75  Aligned_cols=254  Identities=60%  Similarity=1.040  Sum_probs=234.0

Q ss_pred             CCccchHHHHHhhhccchhhhhhcccccchhhhhhccccccccccccCCCCCCCCCCCCCcEEEEeCCCCCCCCCCCCCC
Q 024713            1 MWGYLWIPILFSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNA   80 (263)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvIGI~~~~~~~~~~~~~~~   80 (263)
                      ||++++++.|.++.....+......|+||+|.+.+.|        ++|.|++|||++|+||||||+++|++++.+++.++
T Consensus         1 m~~~~~~~~l~~~~~S~~~~~~~~~ilLps~~g~e~S--------RspvcsapdpnlnykPvIGIL~hpg~g~~~rl~n~   72 (340)
T KOG1559|consen    1 MWRFLFFLSLLFFMASPGALLCAESILLPSQAGFELS--------RSPVCSAPDPNLNYKPVIGILSHPGDGASGRLKNA   72 (340)
T ss_pred             CcchHHHHHHHHhccChHHHHHHhheecccccccccc--------cCccccCCCCCcccCceeEEeccCCCCccceeccc
Confidence            8886666665544344447777899999999998765        68899999999999999999999999999999999


Q ss_pred             CchhhhHHHHHHHHHHcCCeEEEEecCCChhhHHHhcccCCEEEECCCCCCChhhHHHHHHHHHHHHHhCCCCCcceEEe
Q 024713           81 TNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYA  160 (263)
Q Consensus        81 ~~~s~i~~s~v~~le~~G~~~v~i~~~~~~~~l~~~l~~~dGlilpGG~~~~~~~~~~~~~li~~a~~~~d~g~~~PILG  160 (263)
                      .+++||++||||.+|..||||+++.++++++.+..+++.+||||||||++....|++.++.+++++++++|+|+|+||+|
T Consensus        73 t~~~yIAASYVK~aEsgGARViPli~nepEe~lfqklelvNGviftGGwak~~dY~~vvkkifnk~le~nDaGehFPvyg  152 (340)
T KOG1559|consen   73 TGRSYIAASYVKLAESGGARVIPLIYNEPEEILFQKLELVNGVIFTGGWAKRGDYFEVVKKIFNKVLERNDAGEHFPVYG  152 (340)
T ss_pred             cCcchhHHHHHHHHHcCCceEEEEecCCcHHHHHHHHHHhceeEecCcccccccHHHHHHHHHHHHHhccCCccccchhh
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             ccchhHHHHHHHcCcccccccccCCCcceeeEEeecCCCCCcccccCChhhhhhcCCCceeEEEecceecCCCccccccC
Q 024713          161 HCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDL  240 (263)
Q Consensus       161 IClG~QlL~~~~GG~~~~l~~~~~~~~~~pl~~~~~~~~~s~Lf~~lp~~~~~~l~~~~~~~~~Hs~~V~p~~~~~~~~L  240 (263)
                      ||+||++|.++.+-..++++.++..+...+++|+.+.+..+++|+++|+++++.|+.+++++++|.|+|+|++|+.|+.|
T Consensus       153 ~CLGFE~lsmiISqnrdile~~d~vd~AssLqF~~nvn~~~t~FQrFPpELLkkL~~dcLvmq~Hk~gisp~nF~~N~~L  232 (340)
T KOG1559|consen  153 ICLGFELLSMIISQNRDILERFDAVDVASSLQFVGNVNIHGTMFQRFPPELLKKLSTDCLVMQNHKFGISPKNFQGNPAL  232 (340)
T ss_pred             hhhhHHHHHHHHhcChhHHHhhcccccccceeeecccceeehhHhhCCHHHHHHhccchheeeccccccchhhccCCHHH
Confidence            99999999999874447889999999999999998777789999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEEccCCCCEEEEEe
Q 024713          241 SRFFKMLTTSADEDNKCKPMTI  262 (263)
Q Consensus       241 ~~~f~v~Ats~D~~g~~fvs~v  262 (263)
                      ++||+|++|+.|.++++|||||
T Consensus       233 s~FFnilTT~~D~~~k~fvSTv  254 (340)
T KOG1559|consen  233 SSFFNILTTCTDGNSKTFVSTV  254 (340)
T ss_pred             HHHHhheeeecCCCceEEEEee
Confidence            9999999999999999999997

>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02327 CTP synthase Back     alignment and domain information
>KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>KOG3210 consensus Imidazoleglycerol-phosphate synthase subunit H-like [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 Back     alignment and domain information
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi Back     alignment and domain information
>PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>PRK05282 (alpha)-aspartyl dipeptidase; Validated Back     alignment and domain information
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>TIGR01382 PfpI intracellular protease, PfpI family Back     alignment and domain information
>PRK04155 chaperone protein HchA; Provisional Back     alignment and domain information
>cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein Back     alignment and domain information
>cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus Back     alignment and domain information
>TIGR01001 metA homoserine O-succinyltransferase Back     alignment and domain information
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) Back     alignment and domain information
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] Back     alignment and domain information
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins Back     alignment and domain information
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases Back     alignment and domain information
>PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity Back     alignment and domain information
>PRK11574 oxidative-stress-resistance chaperone; Provisional Back     alignment and domain information
>cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein Back     alignment and domain information
>cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02069 cyanophycinase cyanophycinase Back     alignment and domain information
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase Back     alignment and domain information
>TIGR01383 not_thiJ DJ-1 family protein Back     alignment and domain information
>cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09393 ftrA transcriptional activator FtrA; Provisional Back     alignment and domain information
>KOG2764 consensus Putative transcriptional regulator DJ-1 [General function prediction only; Defense mechanisms] Back     alignment and domain information
>PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C Back     alignment and domain information
>COG3340 PepE Peptidase E [Amino acid transport and metabolism] Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>COG4285 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1 Back     alignment and domain information
>COG0303 MoeA Molybdopterin biosynthesis enzyme [Coenzyme metabolism] Back     alignment and domain information
>COG0655 WrbA Multimeric flavodoxin WrbA [General function prediction only] Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01215 competence damage-inducible protein A; Provisional Back     alignment and domain information
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
1l9x_A315 Structure Of Gamma-Glutamyl Hydrolase Length = 315 3e-23
>pdb|1L9X|A Chain A, Structure Of Gamma-Glutamyl Hydrolase Length = 315 Back     alignment and structure 
Iteration: 1

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 15/214 (7%)
Query: 46  LVPRCP--VPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIP 103
           LVPR     P      +P+IGI+         ++       YIAASYVK++ESAGARV+P
Sbjct: 14  LVPRGSHMRPHGDTAKKPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGARVVP 70
Query: 104 LIYNEPE---DVLFEKLELVNGVLYTGGWAK-DGLYYAIVEKVFKKI-LEKNDAGDHFPL 158
           +  +  E   ++LF+    +NG+L+ GG        YA V K+F  + ++  D GD+FP+
Sbjct: 71  VRLDLTEKDYEILFKS---INGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPV 127
Query: 159 YAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTD 218
           +  CLGFE L+++IS +  +L + +  D A  L F     +   +FQ FP +L+  L+ +
Sbjct: 128 WGTCLGFEELSLLISGE-CLLTATDTVDVAMPLNFT-GGQLHSRMFQNFPTELLLSLAVE 185
Query: 219 CLVMQNHHYGISPETLRKNLDLSRFFKMLTTSAD 252
            L    H + +S +    N  L +FF +LTT+ D
Sbjct: 186 PLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTD 219

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query263
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 2e-51
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 7e-07
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Length = 315 Back     alignment and structure
 Score =  169 bits (429), Expect = 2e-51
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 7/219 (3%)

Query: 41  SSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGAR 100
           SS  V       P      +P+IGI+         ++       YIAASYVK++ESAGAR
Sbjct: 11  SSGLVPRGSHMRPHGDTAKKPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGAR 67

Query: 101 VIPLIYNEPEDVLFEKLELVNGVLYTGGWA--KDGLYYAIVEKVFKKILEKNDAGDHFPL 158
           V+P+  +  E       + +NG+L+ GG    +   Y  + +  +   ++  D GD+FP+
Sbjct: 68  VVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPV 127

Query: 159 YAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTD 218
           +  CLGFE L+++IS  + +L + +  D A  L F     +   +FQ FP +L+  L+ +
Sbjct: 128 WGTCLGFEELSLLIS-GECLLTATDTVDVAMPLNFTGG-QLHSRMFQNFPTELLLSLAVE 185

Query: 219 CLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKC 257
            L    H + +S +    N  L +FF +LTT+ D   + 
Sbjct: 186 PLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEF 224
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 99.97
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 99.93
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 99.81
2a9v_A212 GMP synthase; structural genomics, joint center fo 99.79
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 99.78
1i1q_B192 Anthranilate synthase component II; tryptophan bio 99.78
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 99.77
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 99.76
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 99.76
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 99.75
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 99.74
3m3p_A250 Glutamine amido transferase; structural genomics, 99.74
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.73
3uow_A 556 GMP synthetase; structural genomics consortium, SG 99.72
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.72
3l7n_A236 Putative uncharacterized protein; glutamine amidot 99.72
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 99.71
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 99.67
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 99.66
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 99.66
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.64
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 99.61
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.61
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 99.57
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.57
1vco_A550 CTP synthetase; tetramer, riken structural genomic 99.55
1q7r_A219 Predicted amidotransferase; structural genomics, Y 99.55
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 99.49
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 99.48
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 99.47
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 99.46
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 99.43
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 99.38
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 99.2
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 99.14
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 98.82
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 98.66
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 98.62
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 98.11
4hcj_A177 THIJ/PFPI domain protein; structural genomics, PSI 97.67
3l18_A168 Intracellular protease I; gatase1_PFPI_LIKE, hydro 97.61
2rk3_A197 Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha 97.47
2vrn_A190 Protease I, DR1199; cysteine sulfenic acid, DJ-1/T 97.44
1vhq_A232 Enhancing lycopene biosynthesis protein 2; structu 97.4
4e08_A190 DJ-1 beta; flavodoxin-like fold, stress response, 97.34
2ab0_A205 YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase 97.22
3ttv_A753 Catalase HPII; heme orientation, oxidoreductase; H 97.11
3ej6_A688 Catalase-3; heme, hydrogen iron, metal-binding, ox 97.1
3efe_A212 THIJ/PFPI family protein; structural GEN csgid, ce 97.1
3l3b_A242 ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, 97.01
2fex_A188 Conserved hypothetical protein; structural genomic 96.99
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 96.77
3cne_A175 Putative protease I; structural genomics, PSI-2, M 96.67
3uk7_A 396 Class I glutamine amidotransferase-like domain-CO 96.64
3ot1_A208 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate 96.55
2iuf_A688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 96.5
3kkl_A244 Probable chaperone protein HSP33; peptidase, heat 96.42
3f5d_A206 Protein YDEA; unknow protein, PSI-II, nysgrc, stru 96.39
3n7t_A247 Macrophage binding protein; seattle structural gen 96.37
3ewn_A253 THIJ/PFPI family protein; monomer, PSI nysgrc, str 96.3
1n57_A291 Chaperone HSP31, protein YEDU; alpha-beta sandwich 96.16
3fse_A 365 Two-domain protein containing DJ-1/THIJ/PFPI-like 96.15
3er6_A209 Putative transcriptional regulator protein; struct 96.14
3gra_A202 Transcriptional regulator, ARAC family; transcript 96.11
3noq_A231 THIJ/PFPI family protein; DJ-1 superfamily, isocya 96.07
1sy7_A715 Catalase 1; heme oxidation, singlet oxygen, oxidor 95.93
3mgk_A211 Intracellular protease/amidase related enzyme (THI 95.86
3en0_A291 Cyanophycinase; serine protease, beta peptide spec 95.85
1u9c_A224 APC35852; structural genomics, protein structure i 95.7
1rw7_A243 YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI supe 95.26
4gdh_A194 DJ-1, uncharacterized protein C22E12.03C; unknown 93.31
3bhn_A236 THIJ/PFPI domain protein; structural genomics, joi 90.29
3h75_A 350 Periplasmic sugar-binding domain protein; protein 85.82
2an1_A292 Putative kinase; structural genomics, PSI, protein 82.73
3pzy_A164 MOG; ssgcid, seattle structural genomics center fo 81.72
3l6u_A293 ABC-type sugar transport system periplasmic compo; 81.5
3m9w_A 313 D-xylose-binding periplasmic protein; xylose bindi 80.71
3uug_A 330 Multiple sugar-binding periplasmic receptor CHVE; 80.1
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
Probab=99.97  E-value=1.1e-30  Score=239.26  Aligned_cols=213  Identities=31%  Similarity=0.488  Sum_probs=148.7

Q ss_pred             ccccCCCCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHHHcCCeEEEEecCCChhhHHHhcccCCEE
Q 024713           44 SVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGV  123 (263)
Q Consensus        44 ~~~~~~~~~~~~~~~~~PvIGI~~~~~~~~~~~~~~~~~~s~i~~s~v~~le~~G~~~v~i~~~~~~~~l~~~l~~~dGl  123 (263)
                      ++.--+|-.+.+..+.||+|||++.......  . .....+|+.++|+++|+++|+++++++++.+.+.++..++.+|||
T Consensus        14 ~~~~~~~m~~~~~~~~~P~IGI~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~i~~~l~~~dgl   90 (315)
T 1l9x_A           14 LVPRGSHMRPHGDTAKKPIIGILMQKCRNKV--M-KNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGI   90 (315)
T ss_dssp             --------------CCCCEEEEECEECCSHH--H-HTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEE
T ss_pred             cccCccccCCCcccCCCCEEEEECCcccccc--c-ccCcceehHHHHHHHHHHCCCEEEEEecCCCHHHHHHHHhcCCEE
Confidence            3344567777778888999999997653210  0 012357888999999999999999999877667777767889999


Q ss_pred             EECCCC-CCChhhHHH-HHHHHHHHHHhCCCCCcceEEeccchhHHHHHHHcCcccccccccCCCcceeeEEeecCCCCC
Q 024713          124 LYTGGW-AKDGLYYAI-VEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEG  201 (263)
Q Consensus       124 ilpGG~-~~~~~~~~~-~~~li~~a~~~~d~g~~~PILGIClG~QlL~~~~GG~~~~l~~~~~~~~~~pl~~~~~~~~~s  201 (263)
                      |||||+ ++++..+.. ...+++.+++..++|+.+||||||+|||+|+.++||++. +..+...+...|++.+.... .+
T Consensus        91 il~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~-~~~~~~~g~~~p~~~~~~~~-~s  168 (315)
T 1l9x_A           91 LFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECL-LTATDTVDVAMPLNFTGGQL-HS  168 (315)
T ss_dssp             EECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCC-CEEEEEEEEEECCEECSTTT-TC
T ss_pred             EEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccc-cccccccCCCCCeeeccCCC-CC
Confidence            999997 566654433 346777777763334349999999999999999999842 33333233345665543333 78


Q ss_pred             cccccCChhhhhhcCCCceeEEEecceecCCCccccccCCCCcEEEEEEccCCCCEEEEEe
Q 024713          202 TVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTI  262 (263)
Q Consensus       202 ~Lf~~lp~~~~~~l~~~~~~~~~Hs~~V~p~~~~~~~~L~~~f~v~Ats~D~~g~~fvs~v  262 (263)
                      +||+.+|+++...++++..++++|+|+|.++.+.++..|+++|+++|++.| +..++|+++
T Consensus       169 ~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~~~~~~~~l~~g~~v~A~s~d-g~ve~i~~i  228 (315)
T 1l9x_A          169 RMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTD-GKIEFISTM  228 (315)
T ss_dssp             STTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHHHHHEEEEEEEES-SSCEEEEEE
T ss_pred             hHHHhcChhhhhhccccceEEEhhhhhcCccccccccccCCCCEEEEEcCC-CCEEEEEEe
Confidence            999999998877777777888999999988777665578899999999965 457888664
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii} Back     alignment and structure
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A Back     alignment and structure
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... Back     alignment and structure
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} Back     alignment and structure
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A Back     alignment and structure
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster} Back     alignment and structure
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis} Back     alignment and structure
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis} Back     alignment and structure
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2 Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A* Back     alignment and structure
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV} Back     alignment and structure
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida} Back     alignment and structure
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} Back     alignment and structure
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2 Back     alignment and structure
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A Back     alignment and structure
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A Back     alignment and structure
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4} Back     alignment and structure
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A Back     alignment and structure
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum} Back     alignment and structure
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* Back     alignment and structure
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 263
d1l9xa_288 c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Ho 9e-29
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 9e-29
 Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 7/195 (3%)

Query: 60  RPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLEL 119
           +P+IGI+         ++       YIAASYVK++ESAGARV+P+  +  E       + 
Sbjct: 3   KPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKS 59

Query: 120 VNGVLYTGGWA--KDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKN 177
           +NG+L+ GG    +   Y  + +  +   ++  D GD+FP++  CLGFE L+++IS  + 
Sbjct: 60  INGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISG-EC 118

Query: 178 ILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKN 237
           +L + +  D A  L F     +   +FQ FP +L+  L+ + L    H + +S +    N
Sbjct: 119 LLTATDTVDVAMPLNFT-GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMN 177

Query: 238 LDLSRFFKMLTTSAD 252
             L +FF +LTT+ D
Sbjct: 178 EKLKKFFNVLTTNTD 192

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query263
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 100.0
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 99.82
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 99.8
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 99.73
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 99.72
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 99.72
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 99.7
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.65
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 99.64
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.62
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.61
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.54
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.51
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.37
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 99.31
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 99.22
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 98.99
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 98.89
d1p80a1156 Catalase, C-terminal domain {Escherichia coli, HPI 97.86
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 97.52
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 97.47
d1sy7a1184 Catalase, C-terminal domain {Neurospora crassa [Ta 97.33
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 97.31
d1p5fa_186 DJ-1 {Human (Homo sapiens) [TaxId: 9606]} 97.27
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 97.03
d2fexa1188 Hypothetical protein Atu0886 {Agrobacterium tumefa 96.68
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 96.67
d2ab0a1195 Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] 96.43
d1n57a_279 HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} 95.03
d1fyea_229 Aspartyl dipeptidase PepE {Salmonella typhimurium 91.49
d1wu2a3144 MoeA, central domain {Pyrococcus horikoshii, PH164 86.76
d1jyea_271 Lac-repressor (lacR) core (C-terminal domain) {Esc 86.46
d1uz5a3148 MoeA, central domain {Archaeon Pyrococcus horikosh 85.3
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 84.86
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 84.38
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 83.74
d2ftsa3155 Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId 83.42
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=272.97  Aligned_cols=198  Identities=32%  Similarity=0.531  Sum_probs=164.0

Q ss_pred             CCcEEEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHHHcCCeEEEEecCCChhhHHHhcccCCEEEECCCCC-CChhhH-
Q 024713           59 YRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWA-KDGLYY-  136 (263)
Q Consensus        59 ~~PvIGI~~~~~~~~~~~~~~~~~~s~i~~s~v~~le~~G~~~v~i~~~~~~~~l~~~l~~~dGlilpGG~~-~~~~~~-  136 (263)
                      .||||||++++.+..   .......+||+++|+++++++|++|++++++.+.++++++++++||||||||+. .++..+ 
T Consensus         2 ~kPiIGI~~~~~~~~---~~~~~~~~yi~~sYvk~ie~aGa~vvpi~~~~~~~~~~~~l~~idGillpGG~~~~~~~~~~   78 (288)
T d1l9xa_           2 KKPIIGILMQKCRNK---VMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYA   78 (288)
T ss_dssp             CCCEEEEECEECCSH---HHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHH
T ss_pred             CCCEEEEeCCcccCc---ccccchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHhhcCCeEecCCCCCccccccc
Confidence            699999999875432   123346799999999999999999999999999999999999999999999985 445433 


Q ss_pred             HHHHHHHHHHHHhCCCCCcceEEeccchhHHHHHHHcCcccccccccCCCcceeeEEeecCCCCCcccccCChhhhhhcC
Q 024713          137 AIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLS  216 (263)
Q Consensus       137 ~~~~~li~~a~~~~d~g~~~PILGIClG~QlL~~~~GG~~~~l~~~~~~~~~~pl~~~~~~~~~s~Lf~~lp~~~~~~l~  216 (263)
                      ...+.+++.++.+++.++++||||||+|||+|+.++||+.. .......+...++.+..... .+.+|..+|..+...+.
T Consensus        79 ~~~r~~~~~~l~~~~~~~~~PilGIC~G~Qll~~~~gG~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  156 (288)
T d1l9xa_          79 KVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECL-LTATDTVDVAMPLNFTGGQL-HSRMFQNFPTELLLSLA  156 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCC-CEEEEEEEEEECCEECSTTT-TCSTTTTSCHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhhCCCCeEEEcHHHHHHHHHhCCEee-ccccCcCCcceeEEecCCCc-cceeEeecccchhhhcc
Confidence            44568888888888888999999999999999999999732 22233344456666665444 78899999999999999


Q ss_pred             CCceeEEEecceecCCCccccccCCCCcEEEEEEccCCCCEEEEEe
Q 024713          217 TDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNKCKPMTI  262 (263)
Q Consensus       217 ~~~~~~~~Hs~~V~p~~~~~~~~L~~~f~v~Ats~D~~g~~fvs~v  262 (263)
                      ++..++++|+|+|++.++..++.|+++|+++|++.| ++.+||+++
T Consensus       157 ~~~~~~~~H~~~v~~~~~~~~~~l~~~~~v~a~s~d-~~~e~I~~i  201 (288)
T d1l9xa_         157 VEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTD-GKIEFISTM  201 (288)
T ss_dssp             HSCCEEEEEEEECBHHHHHTCHHHHHHEEEEEEEES-SSCEEEEEE
T ss_pred             CCceEEEecccEEEecccchhhhcCCceEEEEEECC-CCeEEEEEE
Confidence            999999999999999999888899999999999977 678999875
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fyea_ c.23.16.4 (A:) Aspartyl dipeptidase PepE {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]} Back     information, alignment and structure
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure