Citrus Sinensis ID: 024733

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHEHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccc
Coil and Loop (DISEMBL)
mksssklfTFGLVAAWYSSNIGVLLLNKYLlsnygfrypiFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFgnvslrflpvsfnqavgattpFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIasggepsfhLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Flexible Loop (DISEMBL)
MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Low Complexity Region (SEG)
MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Disordered region (IsUnstruct)
******LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCL**
Disordered Region (DISOPRED)
*****KL**FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS**EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT*
Disordered Region (DISEMBL)
MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Disordered Region (DISPRO)
**SSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCL**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	263	2.2.26 [Sep-21-2011]
Q5XF09	308	Probable sugar phosphate/	yes	no	0.984	0.840	0.888	1e-135
Q6DBP3	309	Probable sugar phosphate/	yes	no	0.984	0.838	0.888	1e-134
Q9FYE5	309	Probable sugar phosphate/	no	no	0.984	0.838	0.713	1e-105
Q9SS40	355	Probable sugar phosphate/	no	no	0.961	0.712	0.707	1e-104
Q9LDH3	361	Probable sugar phosphate/	no	no	0.973	0.709	0.636	2e-88
Q9SFE9	341	GDP-mannose transporter G	no	no	0.923	0.712	0.337	2e-33
Q9C521	336	UDP-galactose transporter	no	no	0.973	0.761	0.319	5e-32
Q3E6T0	349	Probable sugar phosphate/	no	no	0.935	0.704	0.303	1e-19
Q9SUV2	350	Probable sugar phosphate/	no	no	0.931	0.7	0.316	2e-19
Q9LFN3	351	Probable sugar phosphate/	no	no	0.927	0.695	0.310	2e-19

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/259 (88%), Positives = 249/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           + ++ + FT GLVA+WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 3   IAANGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 62

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           MKMVPMQTIRSR+QFLKI+ALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 63  MKMVPMQTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 122

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           L+T KREAWLTY TL+PVVTGV+IASG EPSFHLFGF+MCIAATAARALKSVLQGILLSS
Sbjct: 123 LITFKREAWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSS 182

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAYF
Sbjct: 183 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYF 242

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 243 VNLTNFLVTKHTSALTLQV 261

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  478 bits (1231), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/259 (88%), Positives = 248/259 (95%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           M ++ + FT GLVA+WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 3   MATNGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 62

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSR+QF KI+ALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 63  LKMVPMQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 122

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMT K+EAWLTY TL+PVVTGV+IASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS
Sbjct: 123 LMTRKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 182

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAY 
Sbjct: 183 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYL 242

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVT HTSALTLQV
Sbjct: 243 VNLTNFLVTNHTSALTLQV 261

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  381 bits (979), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/262 (71%), Positives = 222/262 (84%), Gaps = 3/262 (1%)

Query: 1   MKSSSK---LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIA 57
           M SS+K   LF   L+ +WYSSNIGVLLLNK+LLSNYGF++PIFLTMCHM+AC++LSYI+
Sbjct: 1   MSSSAKKQTLFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYIS 60

Query: 58  IAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAV 117
           I ++K+VP+Q ++SR QFLK++ LS VFC SVV GN+SLR+LPVSFNQAVGATTPFFTA+
Sbjct: 61  IVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTAL 120

Query: 118 FAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGIL 177
           FAYLMT KREAW+TY  L+PVV GV+IASGGEP FH FGF+MCI+ATAARA KSVLQGIL
Sbjct: 121 FAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGIL 180

Query: 178 LSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL 237
           LSSEGEKLNSMNL+LYM+PIAV+ LLP TL ME +V+ +TL LA+    +   LL NS +
Sbjct: 181 LSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVM 240

Query: 238 AYFVNLTNFLVTKHTSALTLQV 259
           AY  NL NFLVTKHTSALTLQV
Sbjct: 241 AYSANLLNFLVTKHTSALTLQV 262

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/253 (70%), Positives = 216/253 (85%)

Query: 7   LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM 66
           LF   L+  WY+SNIGVLLLNK+LLSNYGF++PIFLTMCHM+AC++LSY++I ++K+VP+
Sbjct: 56  LFISSLIILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPL 115

Query: 67  QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKR 126
           Q ++SR QFLK++ LS VFC SVV GN+SLR+LPVSFNQAVGATTPFFTA+FAY+MT KR
Sbjct: 116 QYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKR 175

Query: 127 EAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLN 186
           EAW+TY  L+PVVTGV+IASGGEP FH FGF+MCI+ATAARA KSVLQGILLSSEGE+LN
Sbjct: 176 EAWVTYGALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLN 235

Query: 187 SMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNF 246
           SMNL+LYM+PIAV+ LLP T+ ME +V+ +TL L R    +   LL NS +AY  NL NF
Sbjct: 236 SMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNF 295

Query: 247 LVTKHTSALTLQV 259
           LVTKHTSALTLQV
Sbjct: 296 LVTKHTSALTLQV 308

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score =  325 bits (833), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 163/256 (63%), Positives = 202/256 (78%)

Query: 4   SSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKM 63
           S  + T  ++AAW+ SNIGVLLLNKYLL  YGFRYPIFLTM HM +C+  S   I    +
Sbjct: 54  SPTILTAAIIAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGI 113

Query: 64  VPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMT 123
           VP Q I SR QFLKI +LS +FC+SVV GN SLR++PVSFNQA+GATTPFFTAVF++L+T
Sbjct: 114 VPRQHILSRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLIT 173

Query: 124 LKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGE 183
            K E+   Y+ L+PVV+G+++AS  EPSFHLFGFL+C+A+TA RALKSV+QGI+L+SE E
Sbjct: 174 CKTESTEVYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESE 233

Query: 184 KLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL 243
           KL+SMNLLLYMAP+A  +LLP TL +E NV+ + +  AR D  II+ L  N+ +AY VNL
Sbjct: 234 KLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNL 293

Query: 244 TNFLVTKHTSALTLQV 259
           TNFLVTKHTSALTLQV
Sbjct: 294 TNFLVTKHTSALTLQV 309

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 145/249 (58%), Gaps = 6/249 (2%)

Query: 13  VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSR 72
           +  W+  N+ V+++NK++     F++P+ ++  H    S+ +YI I  +K+ P+  +   
Sbjct: 19  ILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPE 78

Query: 73  LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTY 132
            ++ +I  +SFVFCI++V GN+SLR++PVSF Q + + TP  T V  +L+  K   W  +
Sbjct: 79  DRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIW 138

Query: 133 VTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLL 192
            +L+P+V G+++ S  E SF++FGF   +    A + K++L   LL   G K +S+N + 
Sbjct: 139 ASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLL--HGYKFDSINTVY 196

Query: 193 YMAPIAVVLL-LPATLIMEKNVVGITLALARDDVKIIWYLLFNSA-LAYFVNLTNFLVTK 250
           YMAP A ++L LPA L+    ++    A       +I  +LFNS  LA+ +N + F V +
Sbjct: 197 YMAPFATMILGLPAFLLERNGILDWFEAHPSPWSALI--ILFNSGVLAFCLNFSIFYVIQ 254

Query: 251 HTSALTLQV 259
            T+A+T  V
Sbjct: 255 STTAVTFNV 263

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  138 bits (347), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 146/260 (56%), Gaps = 4/260 (1%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           M+  S   +   +  W+  N+ V+++NK++     F++P+ ++  H    S+ +YI I  
Sbjct: 1   MEEGSMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKV 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +K+ P+  +    ++ +I  +SFVFCI++V GNVSLR++PVSF Q + + TP  T V  +
Sbjct: 61  LKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           L+  K   W  + +L+P+V G+++ S  E SF++FGF   +    A + K++L   LL  
Sbjct: 121 LVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL-- 178

Query: 181 EGEKLNSMNLLLYMAPIAVVLL-LPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAY 239
            G K +S+N + YMAP A ++L +PA L+    ++    A       +I  +L +  LA+
Sbjct: 179 HGYKFDSINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALI-IILSSGVLAF 237

Query: 240 FVNLTNFLVTKHTSALTLQV 259
            +N + F V   T+A+T  V
Sbjct: 238 CLNFSIFYVIHSTTAVTFNV 257

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 136/260 (52%), Gaps = 14/260 (5%)

Query: 7   LFTFGLVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMV 64
           + ++  VA W   +  V++ NKY+L    Y + +PI LTM HM+ CS L+++ I   K V
Sbjct: 16  IISYTYVAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFV 75

Query: 65  PMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTL 124
              ++        +  +  ++ +S+   N +  +L VSF Q + A  P   AV++  +  
Sbjct: 76  EPVSMSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLF 133

Query: 125 KREAWL--TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEG 182
           K+E +   T + ++ +  GV IA+ GE  F ++G ++ + A A  A + V+  ILL+S+G
Sbjct: 134 KKEGFKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKG 193

Query: 183 EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF--NSALAYF 240
             LN +  L Y+AP  +  L    +++E  ++  T +   D      YL+F  NS  A+ 
Sbjct: 194 ITLNPITSLYYVAPCCLAFLFIPWIVVEFPILRDTSSFHFD------YLIFGTNSFCAFA 247

Query: 241 VNLTNFLVTKHTSALTLQVC 260
           +NL  FL+   TSALT+ V 
Sbjct: 248 LNLAVFLLVGKTSALTMNVA 267

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 14/259 (5%)

Query: 7   LFTFGLVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMV 64
           L ++  VA W   +  V++ NKY+L    Y + +PI LTM HM  CS L+ I I   K+V
Sbjct: 16  LLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIV 75

Query: 65  PMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTL 124
              ++        +  +  ++ +S+   N +  +L VSF Q + A  P   AV++  + L
Sbjct: 76  EPVSMSRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLL 133

Query: 125 KREAWL--TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEG 182
           K+E++   T   ++ +  GV IA+ GE  F  +G ++ + A A  A + VL  ILL+S+G
Sbjct: 134 KKESFKSETMTNMLSISFGVAIAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKG 193

Query: 183 EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF--NSALAYF 240
             LN +  L Y+AP  +V L    + +E  ++  T +   D      +++F  NS  A+ 
Sbjct: 194 INLNPITSLYYVAPCCLVFLFFPWIFVELPILRETSSFHFD------FVIFGTNSVCAFA 247

Query: 241 VNLTNFLVTKHTSALTLQV 259
           +NL  FL+   TSALT+ V
Sbjct: 248 LNLAVFLLVGKTSALTMNV 266

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 14/258 (5%)

Query: 9   TFGLVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM 66
           ++  VA W   +  V++ NKY+L    Y + +PI LTM HM+ CS L+++ I   K V  
Sbjct: 18  SYSYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVFKFVEP 77

Query: 67  QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKR 126
             +        +  +  ++ +S+   N +  +L VSF Q + A  P   AV++  +  K+
Sbjct: 78  VKMTRETYLRSVVPIGALYALSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLFKK 135

Query: 127 EAWL--TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEK 184
           E +   T + ++ +  GV IA+ GE  F ++G ++ + A A  A + VL  ILL  +G K
Sbjct: 136 EGFKSDTMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDKGIK 195

Query: 185 LNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF--NSALAYFVN 242
           LN +  L Y+AP  +  L    + +E  V+  T +   D      Y +F  NS  A+ +N
Sbjct: 196 LNPITSLYYVAPCCLAFLFIPWIYVEFPVLRDTSSFHLD------YAIFGANSFCAFALN 249

Query: 243 LTNFLVTKHTSALTLQVC 260
           L  FL+   TSALT+ V 
Sbjct: 250 LAVFLLVGKTSALTMNVA 267

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
356551544	306	PREDICTED: probable sugar phosphate/phos	0.984	0.846	0.922	1e-137
224112607	306	predicted protein [Populus trichocarpa]	0.984	0.846	0.915	1e-137
225449232	306	PREDICTED: probable sugar phosphate/phos	0.984	0.846	0.922	1e-136
449521685	306	PREDICTED: probable sugar phosphate/phos	0.984	0.846	0.911	1e-136
449441330	308	PREDICTED: probable sugar phosphate/phos	0.984	0.840	0.907	1e-136
449465053	446	PREDICTED: probable sugar phosphate/phos	0.984	0.580	0.911	1e-135
363807844	306	uncharacterized protein LOC100817995 [Gl	0.984	0.846	0.907	1e-135
224098509	306	predicted protein [Populus trichocarpa]	0.984	0.846	0.899	1e-134
297810683	306	hypothetical protein ARALYDRAFT_487383 [	0.984	0.846	0.895	1e-134
297833916	308	organic anion transporter [Arabidopsis l	0.984	0.840	0.891	1e-134

>gi|356551544|ref|XP_003544134.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Glycine max]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/259 (92%), Positives = 254/259 (98%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MKSSS+LFT GLV+AWYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSL SY+AIAW
Sbjct: 1   MKSSSRLFTIGLVSAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSRLQFLKI+ALS VFC+SVVFGNVSLR+LPVSFNQAVGATTPFFTAVFAY
Sbjct: 61  LKMVPMQTIRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAVGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           +MT KREAWLTY+TL+PVVTGV+IASGGEPSFHLFGF++CIAATAARALKSVLQGILLSS
Sbjct: 121 IMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIVCIAATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIME+NVVGITLALARDDVKIIWYLLFNSALAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112607|ref|XP_002316239.1| predicted protein [Populus trichocarpa] gi|222865279|gb|EEF02410.1| predicted protein [Populus trichocarpa]

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/259 (91%), Positives = 253/259 (97%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MKS+S+ FT GLV++WY SNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 1   MKSTSRFFTIGLVSSWYCSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           MKMVPMQTIRS+ QF+KISALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 61  MKMVPMQTIRSKTQFIKISALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMTLKREAWLTYVTLIPVVTGV+IASGGEPSFHLFGF+MCI+ATAARALKSVLQGILLSS
Sbjct: 121 LMTLKREAWLTYVTLIPVVTGVVIASGGEPSFHLFGFIMCISATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIME+NVVGITLALARDDVKIIWYLLFNS+LAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSSLAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449232|ref|XP_002279987.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Vitis vinifera] gi|147859522|emb|CAN81426.1| hypothetical protein VITISV_014591 [Vitis vinifera]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/259 (92%), Positives = 250/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MK+SS+ FT GLV AWYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 1   MKNSSRFFTIGLVTAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           MKMVPMQTIRSR+QF+KISALS VFC SVV GN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 61  MKMVPMQTIRSRVQFMKISALSLVFCASVVSGNISLRFLPVSFNQAIGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCI ATAARALKSVLQGILLSS
Sbjct: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIGATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATL ME+NVVGITLALARDD+KI+WYLLFNSALAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPATLFMEENVVGITLALARDDIKIVWYLLFNSALAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521685|ref|XP_004167860.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Cucumis sativus]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/259 (91%), Positives = 251/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MK SS+ FT GLV +WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 1   MKGSSRFFTIGLVTSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSR+QFLKI+ALSFVFCISVVFGN+SLR+LPVSFNQAVGATTPFFTAVFAY
Sbjct: 61  LKMVPMQTIRSRIQFLKIAALSFVFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMT+KREAWLTYVTLIPVVTGVIIASGGEPSFHLFGF++C+AATAARALKSVLQGILLSS
Sbjct: 121 LMTMKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPA L ME+NVVGITLALARDD KIIWYLLFNS+LAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPAALFMEENVVGITLALARDDKKIIWYLLFNSSLAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441330|ref|XP_004138435.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Cucumis sativus] gi|449516647|ref|XP_004165358.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Cucumis sativus]

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/259 (90%), Positives = 253/259 (97%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MK +S+ FT GLVAAWYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSYIAIAW
Sbjct: 1   MKGTSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYIAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +K+VP+QTIRSR+QF KISALSF+FCISVVFGN+SLR+LPVSFNQA+GATTPFFTAVFAY
Sbjct: 61  LKLVPLQTIRSRVQFFKISALSFIFCISVVFGNISLRYLPVSFNQAIGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL+C+AATAARALKSVLQGILLS+
Sbjct: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLICVAATAARALKSVLQGILLSA 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           +GEKLNSMNLLLYMAP+AVV LLPATLIME NVVGITLALARDD+KIIWYLLFNS+LAYF
Sbjct: 181 DGEKLNSMNLLLYMAPMAVVFLLPATLIMEHNVVGITLALARDDIKIIWYLLFNSSLAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465053|ref|XP_004150243.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Cucumis sativus]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/259 (91%), Positives = 251/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MK SS+ FT GLV +WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 141 MKGSSRFFTIGLVTSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 200

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSR+QFLKI+ALSFVFCISVVFGN+SLR+LPVSFNQAVGATTPFFTAVFAY
Sbjct: 201 LKMVPMQTIRSRIQFLKIAALSFVFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAY 260

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMT+KREAWLTYVTLIPVVTGVIIASGGEPSFHLFGF++C+AATAARALKSVLQGILLSS
Sbjct: 261 LMTMKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSS 320

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPA L ME+NVVGITLALARDD KIIWYLLFNS+LAYF
Sbjct: 321 EGEKLNSMNLLLYMAPIAVVFLLPAALFMEENVVGITLALARDDKKIIWYLLFNSSLAYF 380

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 381 VNLTNFLVTKHTSALTLQV 399

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807844|ref|NP_001242185.1| uncharacterized protein LOC100817995 [Glycine max] gi|255635088|gb|ACU17902.1| unknown [Glycine max]

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 235/259 (90%), Positives = 250/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MKSS +L   GLV+AWYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSL SY+AIAW
Sbjct: 1   MKSSRRLLRIGLVSAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSRLQFLKI+ALS +FC SVVFGNVSLR+LPVSFNQAVGATTPFFTAVFAY
Sbjct: 61  LKMVPMQTIRSRLQFLKIAALSLIFCFSVVFGNVSLRYLPVSFNQAVGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           +MT KREAWLTY+TL+PVVTGV+IASGGEPSFHLFGF++CIAATAARALKSVLQGILLSS
Sbjct: 121 VMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFVVCIAATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIME+NVVGITLALARDDVKIIWYLLFNSALAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098509|ref|XP_002311199.1| predicted protein [Populus trichocarpa] gi|222851019|gb|EEE88566.1| predicted protein [Populus trichocarpa]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/259 (89%), Positives = 249/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           MKS+S+ FT  LVA+WY SNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 1   MKSTSRFFTISLVASWYCSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           MKMVPMQTIRS+ QFLKISALS VFC+SVVFGN+SLRFLPVSFNQAVGATTPFFTAVFAY
Sbjct: 61  MKMVPMQTIRSKTQFLKISALSLVFCVSVVFGNISLRFLPVSFNQAVGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LM LKREAWLTY TL+PVVTGV+IASGGEPSFHLFGF+MCI+ATAARALKSVLQGILLSS
Sbjct: 121 LMILKREAWLTYATLVPVVTGVVIASGGEPSFHLFGFIMCISATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV+LLP TL+ME+NVVGIT+ALARDD KIIWYLLFNSALAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVILLPVTLVMEENVVGITVALARDDSKIIWYLLFNSALAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810683|ref|XP_002873225.1| hypothetical protein ARALYDRAFT_487383 [Arabidopsis lyrata subsp. lyrata] gi|297319062|gb|EFH49484.1| hypothetical protein ARALYDRAFT_487383 [Arabidopsis lyrata subsp. lyrata]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/259 (89%), Positives = 249/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           M ++ + FT GLV +WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 1   MATNGRFFTIGLVTSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 60

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           +KMVPMQTIRSR+QF KISALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 61  LKMVPMQTIRSRVQFFKISALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 120

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           LMTLK+EAWLTY TL+PVVTGV+IASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS
Sbjct: 121 LMTLKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAYF
Sbjct: 181 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYF 240

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 241 VNLTNFLVTKHTSALTLQV 259

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833916|ref|XP_002884840.1| organic anion transporter [Arabidopsis lyrata subsp. lyrata] gi|297330680|gb|EFH61099.1| organic anion transporter [Arabidopsis lyrata subsp. lyrata]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/259 (89%), Positives = 250/259 (96%)

Query: 1   MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
           + ++ + FT GLVA+WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct: 3   IAANGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 62

Query: 61  MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
           MKMVPMQTIRSR+QFLKI+ALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct: 63  MKMVPMQTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 122

Query: 121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
           L+T KREAWLTY TL+PVVTGV+IASGGEPSFHLFGF+MCIAATAARALKSVLQGILLSS
Sbjct: 123 LITFKREAWLTYFTLVPVVTGVVIASGGEPSFHLFGFIMCIAATAARALKSVLQGILLSS 182

Query: 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
           EGEKLNSMNLLLYMAPIAVV LLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAYF
Sbjct: 183 EGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYF 242

Query: 241 VNLTNFLVTKHTSALTLQV 259
           VNLTNFLVTKHTSALTLQV
Sbjct: 243 VNLTNFLVTKHTSALTLQV 261

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.977	0.834	0.894	3.1e-122
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.984	0.838	0.888	6.5e-122
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.980	0.834	0.714	1.5e-97
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.961	0.712	0.707	9.7e-96
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.973	0.709	0.636	2.2e-82
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.931	0.704	0.378	2e-40
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.923	0.712	0.341	7.2e-36
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.973	0.761	0.319	6.5e-35
ZFIN|ZDB-GENE-050417-407	460	slc35e4 "solute carrier family	0.916	0.523	0.317	4.2e-26
TAIR|locus:2127841	350	AT4G32390 [Arabidopsis thalian	0.927	0.697	0.323	1.4e-25

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
 Identities = 230/257 (89%), Positives = 248/257 (96%)

Query:     3 SSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMK 62
             ++ + FT GLVA+WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAWMK
Sbjct:     5 ANGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMK 64

Query:    63 MVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLM 122
             MVPMQTIRSR+QFLKI+ALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAYL+
Sbjct:    65 MVPMQTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLI 124

Query:   123 TLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEG 182
             T KREAWLTY TL+PVVTGV+IASG EPSFHLFGF+MCIAATAARALKSVLQGILLSSEG
Sbjct:   125 TFKREAWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEG 184

Query:   183 EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVN 242
             EKLNSMNLLLYMAPIAVV LLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAYFVN
Sbjct:   185 EKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVN 244

Query:   243 LTNFLVTKHTSALTLQV 259
             LTNFLVTKHTSALTLQV
Sbjct:   245 LTNFLVTKHTSALTLQV 261

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
 Identities = 230/259 (88%), Positives = 248/259 (95%)

Query:     1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
             M ++ + FT GLVA+WYSSNIGVLLLNKYLLSNYGF+YPIFLTMCHMTACSLLSY+AIAW
Sbjct:     3 MATNGRFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAW 62

Query:    61 MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
             +KMVPMQTIRSR+QF KI+ALS VFC+SVVFGN+SLRFLPVSFNQA+GATTPFFTAVFAY
Sbjct:    63 LKMVPMQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAY 122

Query:   121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
             LMT K+EAWLTY TL+PVVTGV+IASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS
Sbjct:   123 LMTRKKEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 182

Query:   181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240
             EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGIT+ALARDD +I+WYLLFNSALAY 
Sbjct:   183 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYL 242

Query:   241 VNLTNFLVTKHTSALTLQV 259
             VNLTNFLVT HTSALTLQV
Sbjct:   243 VNLTNFLVTNHTSALTLQV 261

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 188/263 (71%), Positives = 224/263 (85%)

Query:     1 MKSSSK---LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIA 57
             M SS+K   LF   L+ +WYSSNIGVLLLNK+LLSNYGF++PIFLTMCHM+AC++LSYI+
Sbjct:     1 MSSSAKKQTLFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYIS 60

Query:    58 IAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAV 117
             I ++K+VP+Q ++SR QFLK++ LS VFC SVV GN+SLR+LPVSFNQAVGATTPFFTA+
Sbjct:    61 IVFLKLVPLQHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTAL 120

Query:   118 FAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGIL 177
             FAYLMT KREAW+TY  L+PVV GV+IASGGEP FH FGF+MCI+ATAARA KSVLQGIL
Sbjct:   121 FAYLMTFKREAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGIL 180

Query:   178 LSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF-NSA 236
             LSSEGEKLNSMNL+LYM+PIAV+ LLP TL ME +V+ +TL LA+   + +W LL  NS 
Sbjct:   181 LSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQH-QYMWILLLVNSV 239

Query:   237 LAYFVNLTNFLVTKHTSALTLQV 259
             +AY  NL NFLVTKHTSALTLQV
Sbjct:   240 MAYSANLLNFLVTKHTSALTLQV 262

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
 Identities = 179/253 (70%), Positives = 216/253 (85%)

Query:     7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM 66
             LF   L+  WY+SNIGVLLLNK+LLSNYGF++PIFLTMCHM+AC++LSY++I ++K+VP+
Sbjct:    56 LFISSLIILWYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPL 115

Query:    67 QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKR 126
             Q ++SR QFLK++ LS VFC SVV GN+SLR+LPVSFNQAVGATTPFFTA+FAY+MT KR
Sbjct:   116 QYLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKR 175

Query:   127 EAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLN 186
             EAW+TY  L+PVVTGV+IASGGEP FH FGF+MCI+ATAARA KSVLQGILLSSEGE+LN
Sbjct:   176 EAWVTYGALVPVVTGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLN 235

Query:   187 SMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNF 246
             SMNL+LYM+PIAV+ LLP T+ ME +V+ +TL L R    +   LL NS +AY  NL NF
Sbjct:   236 SMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNF 295

Query:   247 LVTKHTSALTLQV 259
             LVTKHTSALTLQV
Sbjct:   296 LVTKHTSALTLQV 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 163/256 (63%), Positives = 202/256 (78%)

Query:     4 SSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKM 63
             S  + T  ++AAW+ SNIGVLLLNKYLL  YGFRYPIFLTM HM +C+  S   I    +
Sbjct:    54 SPTILTAAIIAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGI 113

Query:    64 VPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMT 123
             VP Q I SR QFLKI +LS +FC+SVV GN SLR++PVSFNQA+GATTPFFTAVF++L+T
Sbjct:   114 VPRQHILSRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLIT 173

Query:   124 LKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGE 183
              K E+   Y+ L+PVV+G+++AS  EPSFHLFGFL+C+A+TA RALKSV+QGI+L+SE E
Sbjct:   174 CKTESTEVYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESE 233

Query:   184 KLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL 243
             KL+SMNLLLYMAP+A  +LLP TL +E NV+ + +  AR D  II+ L  N+ +AY VNL
Sbjct:   234 KLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNL 293

Query:   244 TNFLVTKHTSALTLQV 259
             TNFLVTKHTSALTLQV
Sbjct:   294 TNFLVTKHTSALTLQV 309

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 97/256 (37%), Positives = 153/256 (59%)

Query:    11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIR 70
             G +A W+  NI  L+LNKY+ S+  F YPI LT  HM  C + S   +   K++P+ T++
Sbjct:    19 GALALWFILNISTLILNKYIYSSLYFYYPITLTAIHMFVCWIGSVAVLRVYKLIPLITVQ 78

Query:    71 -SRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTL----K 125
              S  QF+ I  LS +FC ++VFGNVSLR++PVSF Q V ++ P FT +   L       K
Sbjct:    79 WSGKQFINIMILSILFCSNIVFGNVSLRWVPVSFMQTVKSSVPLFTVILTTLFFSNIGGK 138

Query:   126 REAWL--TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGE 183
             +  +   TY+++IP+V GV +AS  E +F+  GF+  +A++   A+ +++ G++L+   +
Sbjct:   139 KTTFTRGTYLSMIPIVGGVCVASLSEVNFNQAGFIAALASSILSAVFAIVSGLILT---Q 195

Query:   184 KLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL 243
             ++N++NLL YM+PI+  LL P +  ME N +     L  +   I+  LL +  +A+ +N 
Sbjct:   196 QMNAVNLLYYMSPISCCLLFPLSAFMEWNAIANEWPLYGESKPIV-ILLLSGLIAFLLNT 254

Query:   244 TNFLVTKHTSALTLQV 259
               FLV K TS LT  V
Sbjct:   255 FTFLVIKLTSPLTYTV 270

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 85/249 (34%), Positives = 146/249 (58%)

Query:    13 VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSR 72
             +  W+  N+ V+++NK++     F++P+ ++  H    S+ +YI I  +K+ P+  +   
Sbjct:    19 ILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPE 78

Query:    73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTY 132
              ++ +I  +SFVFCI++V GN+SLR++PVSF Q + + TP  T V  +L+  K   W  +
Sbjct:    79 DRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIW 138

Query:   133 VTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLL 192
              +L+P+V G+++ S  E SF++FGF   +    A + K++L   LL   G K +S+N + 
Sbjct:   139 ASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLL--HGYKFDSINTVY 196

Query:   193 YMAPIAVVLL-LPATLIMEKNVVGITLALARDDVKIIWYLLFNSA-LAYFVNLTNFLVTK 250
             YMAP A ++L LPA L+ E+N + +    A         +LFNS  LA+ +N + F V +
Sbjct:   197 YMAPFATMILGLPAFLL-ERNGI-LDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQ 254

Query:   251 HTSALTLQV 259
              T+A+T  V
Sbjct:   255 STTAVTFNV 263

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 83/260 (31%), Positives = 146/260 (56%)

Query:     1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW 60
             M+  S   +   +  W+  N+ V+++NK++     F++P+ ++  H    S+ +YI I  
Sbjct:     1 MEEGSMFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKV 60

Query:    61 MKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY 120
             +K+ P+  +    ++ +I  +SFVFCI++V GNVSLR++PVSF Q + + TP  T V  +
Sbjct:    61 LKLKPLIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW 120

Query:   121 LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSS 180
             L+  K   W  + +L+P+V G+++ S  E SF++FGF   +    A + K++L   LL  
Sbjct:   121 LVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL-- 178

Query:   181 EGEKLNSMNLLLYMAPIAVVLL-LPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAY 239
              G K +S+N + YMAP A ++L +PA L+    ++    A       +I  +L +  LA+
Sbjct:   179 HGYKFDSINTVYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALI-IILSSGVLAF 237

Query:   240 FVNLTNFLVTKHTSALTLQV 259
              +N + F V   T+A+T  V
Sbjct:   238 CLNFSIFYVIHSTTAVTFNV 257

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

ZFIN|ZDB-GENE-050417-407 slc35e4 "solute carrier family 35, member E4" [Danio rerio (taxid:7955)]

 Score = 297 (109.6 bits), Expect = 4.2e-26, P = 4.2e-26
 Identities = 80/252 (31%), Positives = 124/252 (49%)

Query:    13 VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSY----IAIAWMKMVPMQT 68
             V+ W  +   +  LNK++ + Y FRYP+ L+  HM    ++ Y      +   K V  Q 
Sbjct:   107 VSVWLVTGTTISSLNKWIFAVYNFRYPLLLSALHMLTAIVVDYGLIKSRVVRHKGVGEQD 166

Query:    69 IRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREA 128
             + +  +  K+  LS  FC S+ FGNV L ++ +SF Q +  TTP FT   + L+  K+  
Sbjct:   167 LTTSAK-CKVFLLSLTFCASIAFGNVGLNYVQLSFAQMIYTTTPLFTLAISALILGKQHH 225

Query:   129 WLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM 188
             +L Y  ++P+  G   +  GE  F   G L   AAT  R +K++ Q ILL  E  K+NS+
Sbjct:   226 FLKYTAMMPICLGASFSIMGEVQFDQTGCLFVFAATMLRGVKTIQQSILLQEE--KINSV 283

Query:   189 NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL-AYFVNLTNFL 247
              LL  M+  +  +L  A L +E N   +      D    +W  +  S L +   NL +  
Sbjct:   284 FLLYLMSIPSFCILAVAALALE-NWAALQSPFQYDHH--LWGFILLSCLGSVLYNLASCC 340

Query:   248 VTKHTSALTLQV 259
             V   TSA+TL +
Sbjct:   341 VITLTSAVTLHI 352

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2127841 AT4G32390 [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 84/260 (32%), Positives = 140/260 (53%)

Query:     7 LFTFGLVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMV 64
             L ++  VA W   +  V++ NKY+L    Y + +PI LTM HM  CS L+ I I   K+V
Sbjct:    16 LLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIV 75

Query:    65 PMQTIRSRLQFLK-ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMT 123
                ++ SR  +++ +  +  ++ +S+   N +  +L VSF Q + A  P   AV++  + 
Sbjct:    76 EPVSM-SRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVL 132

Query:   124 LKREAWL--TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSE 181
             LK+E++   T   ++ +  GV IA+ GE  F  +G ++ + A A  A + VL  ILL+S+
Sbjct:   133 LKKESFKSETMTNMLSISFGVAIAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSK 192

Query:   182 GEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF--NSALAY 239
             G  LN +  L Y+AP  +V L    + +E  ++  T +   D      +++F  NS  A+
Sbjct:   193 GINLNPITSLYYVAPCCLVFLFFPWIFVELPILRETSSFHFD------FVIFGTNSVCAF 246

Query:   240 FVNLTNFLVTKHTSALTLQV 259
              +NL  FL+   TSALT+ V
Sbjct:   247 ALNLAVFLLVGKTSALTMNV 266

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6DBP3	PT505_ARATH	No assigned EC number	0.8880	0.9847	0.8381	yes	no
Q9FYE5	PT504_ARATH	No assigned EC number	0.7137	0.9847	0.8381	no	no
Q5XF09	PT311_ARATH	No assigned EC number	0.8880	0.9847	0.8409	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	9e-15
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	5e-14
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	8e-11
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-07
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	9e-04

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 69.1 bits (170), Expect = 9e-15
 Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 156 GFLMCIAATAARALKSVLQGILLSS-EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVV 214
           GF++ +AA+A  AL+ +L   LL   +G KLN + LL Y++P+A ++LLP  L  E   +
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 215 GITLALARDDVK---IIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVC 260
           G  +     D+K    +  LL +  LA+  NL+ F +   TS LT  V 
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVA 109

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 70.5 bits (173), Expect = 5e-14
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 14/242 (5%)

Query: 11  GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMK-MVPMQTI 69
            L   WY+ N+  ++ NK  L+      P  ++   +    L  +  + W      +  I
Sbjct: 52  LLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWL--FALLYWATGFRKIPRI 107

Query: 70  RSRLQFLKISALSFVFCISVVFGNV-SLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREA 128
           +S   FLK      +  + V FG V S+    VSF   V A  P FTA+ + L   +   
Sbjct: 108 KSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLN 167

Query: 129 WLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSE---GEKL 185
              Y++LIP+V GV +AS  E  F    F   + +    +L+S+     + ++   GE L
Sbjct: 168 LYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENL 227

Query: 186 NSMNLLLYMAPIAVVLLLPATLIMEKN-----VVGITLALARDDVKIIWYLLFNSALAYF 240
            + N+ + +  IA ++ LP  L  E           T  +      II + +F S + Y+
Sbjct: 228 TASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY 287

Query: 241 VN 242
           + 
Sbjct: 288 LY 289

Length = 350

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 8/205 (3%)

Query: 7   LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM 66
           L T  L   WY  N+   + NK LL+   F YP F T+  +   SL   ++  W   +P 
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLS--WSSGLPK 56

Query: 67  QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKR 126
           +   S      +  ++ V  I  V  NVSL  + VSF   + A  PFF+ V      L +
Sbjct: 57  RLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVV-LSAFFLGQ 115

Query: 127 EAWLT-YVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKL 185
           E   T +++L+P+V GV +AS  E SF+  GFL  + +      +++     ++   + L
Sbjct: 116 EFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMT--IKSL 173

Query: 186 NSMNLLLYMAPIAVVLLLPATLIME 210
           +  NL  Y++ +++ LL P   I E
Sbjct: 174 DKTNLYAYISIMSLFLLSPPAFITE 198

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 45/240 (18%), Positives = 86/240 (35%), Gaps = 16/240 (6%)

Query: 33  NYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFG 92
            YG  +   LT       SL+  + +   K +  + I  +        +   F +S V  
Sbjct: 26  EYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPRKIPLK----TYVLIVATFFLSSVLN 81

Query: 93  NVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA----SGG 148
           N +L+++    +    +       +   L+  KR + L Y++ + +  GVII     +  
Sbjct: 82  NEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKD 141

Query: 149 EPSFHL------FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLL 202
             +  L       G  +   A    AL    Q  L    G+   S  ++ Y   +++   
Sbjct: 142 SKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKH--SKEMMFYSHLLSLPFF 199

Query: 203 LPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT 262
           L   L +   ++    +       +++YLL NS   Y      F +     ALT+ +  T
Sbjct: 200 LLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEFGALTVTLVTT 259

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 39.6 bits (93), Expect = 9e-04
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 7/143 (4%)

Query: 99  LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTG-VIIASGGEPSFHLFGF 157
           LPV     +    P +  + + LM  +R   L  +  +  + G V++ S G  S +  G 
Sbjct: 71  LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGL 130

Query: 158 LMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGIT 217
           L+ + +  + AL +VL   L+  EG +L      + +  +  +LLLP    +  N   ++
Sbjct: 131 LLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLL--LGALLLLPFAWFLGPNPQALS 188

Query: 218 LALARDDVKIIWYLLFNSALAYF 240
           L        +++  L  +ALAYF
Sbjct: 189 LQWG----ALLYLGLIGTALAYF 207

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.92
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.86
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.86
PLN00411	358	nodulin MtN21 family protein; Provisional	99.85
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.84
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.84
PRK11272	292	putative DMT superfamily transporter inner membran	99.83
PRK11689	295	aromatic amino acid exporter; Provisional	99.83
PRK15430	296	putative chloramphenical resistance permease RarD;	99.82
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.81
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.79
KOG1581	327	consensus UDP-galactose transporter related protei	99.76
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.75
KOG1580	337	consensus UDP-galactose transporter related protei	99.75
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.7
KOG1582	367	consensus UDP-galactose transporter related protei	99.7
KOG2765	416	consensus Predicted membrane protein [Function unk	99.62
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.62
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.55
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.44
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.41
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.4
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.37
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.33
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.3
COG2510	140	Predicted membrane protein [Function unknown]	99.29
KOG2766	336	consensus Predicted membrane protein [Function unk	99.26
COG2962	293	RarD Predicted permeases [General function predict	99.19
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.18
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.14
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.14
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.04
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.72
PLN00411	358	nodulin MtN21 family protein; Provisional	98.68
PRK11272	292	putative DMT superfamily transporter inner membran	98.58
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.52
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.5
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.48
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.44
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.43
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.42
PRK11689	295	aromatic amino acid exporter; Provisional	98.39
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.2
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.19
PRK15430	296	putative chloramphenical resistance permease RarD;	98.1
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.87
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.83
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.79
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.6
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.59
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.52
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.47
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.43
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.42
COG2076	106	EmrE Membrane transporters of cations and cationic	97.41
PRK11431	105	multidrug efflux system protein; Provisional	97.37
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.31
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.97
COG2962	293	RarD Predicted permeases [General function predict	96.93
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.84
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.75
PRK13499	345	rhamnose-proton symporter; Provisional	96.59
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.24
COG2510	140	Predicted membrane protein [Function unknown]	96.21
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.21
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.08
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.89
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.33
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	95.22
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	94.84
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	93.75
KOG1581	327	consensus UDP-galactose transporter related protei	93.44
KOG4510	346	consensus Permease of the drug/metabolite transpor	92.71
PRK13499	345	rhamnose-proton symporter; Provisional	92.46
KOG2765	416	consensus Predicted membrane protein [Function unk	92.37
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.5
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	89.97
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	89.84
KOG1580	337	consensus UDP-galactose transporter related protei	86.98

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3e-35  Score=249.67  Aligned_cols=257  Identities=44%  Similarity=0.654  Sum_probs=224.3

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHH
Q 024733            3 SSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALS   82 (263)
Q Consensus         3 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (263)
                      +++..+...++..|+.++++.++.||++++.++||+|.+++.+|+..+.+...+ .+..+..|.++.+++.+++..++.|
T Consensus        12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v-~~~l~~~~~~~~~~~~~~~~llpl~   90 (316)
T KOG1441|consen   12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLV-IKVLKLVPPSKISSKLPLRTLLPLG   90 (316)
T ss_pred             cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCCccccccchHHHHHHH
Confidence            344566677789999999999999999999777999999999988777666554 5556666666666778999999999


Q ss_pred             HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHH
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIA  162 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~  162 (263)
                      ++++++..+.|.|++++|++++|++|+++|+++.++++++.+|+++...+.+++.+..||.+.+..|.++|+.|+..+++
T Consensus        91 ~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~  170 (316)
T KOG1441|consen   91 LVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMI  170 (316)
T ss_pred             HHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH-HHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHH
Q 024733          163 ATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLL-PATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFV  241 (263)
Q Consensus       163 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  241 (263)
                      +.+..++++++.|+++.+++++.|+.+++.|+++.+...++ |.....|++.. .......++...+..+. .+++++++
T Consensus       171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~sv~~f~~  248 (316)
T KOG1441|consen  171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLL-NSVLAFLL  248 (316)
T ss_pred             HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHH-HHHHHHHH
Confidence            99999999999999997778899999999999999999999 88777777665 21122234444444444 44999999


Q ss_pred             HHHHHHHHhccCceeEEeecc
Q 024733          242 NLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       242 ~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      |.+.|.+++++||+|++|.|+
T Consensus       249 Nls~f~~ig~tSalT~~V~g~  269 (316)
T KOG1441|consen  249 NLSAFLVIGRTSALTYSVAGH  269 (316)
T ss_pred             HHHHHHHHcccCchhhhhhcc
Confidence            999999999999999999986

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.1e-32  Score=241.77  Aligned_cols=256  Identities=22%  Similarity=0.299  Sum_probs=213.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc-hhhHHHHHHHHH
Q 024733            4 SSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIR-SRLQFLKISALS   82 (263)
Q Consensus         4 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   82 (263)
                      +.+++...+++.|+.+|+..++.||+++++  +|+|++++.+|++++++.+.+... .+.+++++.+ ++++++..++.|
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999998  899999999999999876554432 2233333332 456788999999


Q ss_pred             HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHH
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIA  162 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~  162 (263)
                      +++...+...+.|++++++++++++|++.|+++++++++++|||++++++.+++++++|+.+.+.+|.++++.|++++++
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~  201 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAML  201 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHH
Confidence            99987777788999999999999999999999999999999999999999999999999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhh-----hcccc-chHHHHHHHH
Q 024733          163 ATAARALKSVLQGILLSSEG---EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITL-----ALARD-DVKIIWYLLF  233 (263)
Q Consensus       163 a~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~l~~  233 (263)
                      |++++++|+++.|+..++++   ++.++.+...++.+.+.++++|..+..|+.......     +...+ ....+..++.
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            99999999999999884332   257888888888999999999998766654322111     11111 1234556778


Q ss_pred             HHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733          234 NSALAYFVNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      +++.++++|.++|.+++++||+|+++.++
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~  310 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANT  310 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence            89999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-31  Score=231.19  Aligned_cols=249  Identities=26%  Similarity=0.339  Sum_probs=201.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHH
Q 024733            8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCI   87 (263)
Q Consensus         8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (263)
                      +..+.+..|+..|++.++.||+++++  +++|..+++.|+.++.+.+.+..+ .+.+++++. ++++++..++.|++++.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKI-SSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence            56778899999999999999999998  889999999999999777655421 222233333 45678899999999999


Q ss_pred             HHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHHH
Q 024733           88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAAR  167 (263)
Q Consensus        88 ~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  167 (263)
                      +..+.|.|++|++++++++++++.|+++++++++++|||++++++.+++++++|+.+...+|.+.+..|+++++++++++
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998877667777888999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhc-cccc-hHHHHHHHHHH-HHHHHHH
Q 024733          168 ALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGI--TLAL-ARDD-VKIIWYLLFNS-ALAYFVN  242 (263)
Q Consensus       168 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~--~~~~-~~~~-~~~~~~l~~~~-~~~~~~~  242 (263)
                      ++|.++.||..  +++++|+.+.+.|++..+.+.++|.....|+.+...  +.+. .... ...+......+ ....++|
T Consensus       158 a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (302)
T TIGR00817       158 VSRNIFSKKAM--TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ  235 (302)
T ss_pred             HHHHHHHHHhh--ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence            99999999987  445789999999999999999999986666543211  1010 0011 12222233333 3556677


Q ss_pred             HHHHHHHhccCceeEEeecc
Q 024733          243 LTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       243 ~~~~~~~~~~s~~t~sv~g~  262 (263)
                      ...+.+++++||.++++.+.
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~  255 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNC  255 (302)
T ss_pred             HHHHHHHccCCchHHHHHhh
Confidence            78889999999999988764

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=1.9e-27  Score=198.10  Aligned_cols=251  Identities=21%  Similarity=0.274  Sum_probs=216.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733            7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC   86 (263)
Q Consensus         7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (263)
                      .+.+....+|.++|+.+++.||+++..++||..+++...|.+.+.+.+.+ .+..|..+.++++ ++..|+++|.++++.
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~~~l~-~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLV-LKRLGLVNFRPLD-LRTAKKWFPVSLLFV   88 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH-HHHhceeecCCcC-hHHHHHHccHHHHHH
Confidence            34466788999999999999999999977776667777999988777665 4545555555553 566788999999999


Q ss_pred             HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHH
Q 024733           87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA  166 (263)
Q Consensus        87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~  166 (263)
                      ++...+..+++|+++++++++|..+|+.+++.|..++|.|++.+.+.++....+|.......|.+++..|+.|++.+.+.
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~  168 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT  168 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998899999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhcc-ccchHHHHHHHHHHHHHHHHHHHH
Q 024733          167 RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALA-RDDVKIIWYLLFNSALAYFVNLTN  245 (263)
Q Consensus       167 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~  245 (263)
                      .+.+.++.|+..  +..+.+.+++++|.+.++.+.+....++.+.++ ....+.. ..+...+..+.++|+.++..+++.
T Consensus       169 ~a~~~v~~kk~v--d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s  245 (314)
T KOG1444|consen  169 TAAFVVYVKKSV--DSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS  245 (314)
T ss_pred             HHHHHHHHHHhh--ccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999998  677889999999999999999888886655444 2212211 234577888999999999999999


Q ss_pred             HHHHhccCceeEEeecc
Q 024733          246 FLVTKHTSALTLQVCLT  262 (263)
Q Consensus       246 ~~~~~~~s~~t~sv~g~  262 (263)
                      +.|++.+|++|++++|.
T Consensus       246 ~~ct~~~SAtT~tivG~  262 (314)
T KOG1444|consen  246 FLCTRVNSATTTTIVGA  262 (314)
T ss_pred             HHHHhhccccceeehhh
Confidence            99999999999999984

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=6.2e-27  Score=192.67  Aligned_cols=256  Identities=20%  Similarity=0.405  Sum_probs=223.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhc---CCcccchhhHHHHHHHH
Q 024733            5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMV---PMQTIRSRLQFLKISAL   81 (263)
Q Consensus         5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   81 (263)
                      ++...+..+..||.+|+++.+++|+.-.+  |++|+.++.+|.++-.+......+..+++   .+...+++++.|...|.
T Consensus        13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt   90 (349)
T KOG1443|consen   13 NRVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT   90 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence            46777788899999999999999999887  88899999999988776655544443322   22356788999999999


Q ss_pred             HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHH
Q 024733           82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCI  161 (263)
Q Consensus        82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l  161 (263)
                      ++..+.+..++|+|++|++.+++++.|+..++|+.+++..+.-||+++.-....+++.+|+.+.+.++.++|..|+.+++
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~  170 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVL  170 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh-ccccc----hHHHHHHHHHH
Q 024733          162 AATAARALKSVLQGILLSSEG-EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA-LARDD----VKIIWYLLFNS  235 (263)
Q Consensus       162 ~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~~~  235 (263)
                      .+.++.+++..+.|.++++++ .+-+|+..+++..+...+.++|....+||.....+.. ....|    ......+.++|
T Consensus       171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g  250 (349)
T KOG1443|consen  171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG  250 (349)
T ss_pred             HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence            999999999999999997665 4569999999999999999999999999988764322 22222    24456678899


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEeecc
Q 024733          236 ALAYFVNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       236 ~~~~~~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      .++++.-++.|.++.++|.+|.++.|.
T Consensus       251 ~laF~l~~sEflLl~~Ts~ltlSIaGI  277 (349)
T KOG1443|consen  251 LLAFLLEFSEFLLLSRTSSLTLSIAGI  277 (349)
T ss_pred             HHHHHHHHHHHheeeeccceeeeHHHH
Confidence            999999999999999999999999873

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.92  E-value=8e-23  Score=176.46  Aligned_cols=235  Identities=20%  Similarity=0.359  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 024733           21 IGVLLLNKYLLSN-YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFL   99 (263)
Q Consensus        21 ~~~~~~nK~~l~~-~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~   99 (263)
                      ....+.++.+.++ ++.++|..+++.|+.++.+...+.....+..+    +++.+++.+++.++++.++..+.|.|++|+
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK----SRKIPLKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3444556666654 33448999999999999877666444333111    245667888899999999999999999999


Q ss_pred             chhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCc----c------hHHHHHHHHHHHHHHHH
Q 024733          100 PVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS----F------HLFGFLMCIAATAARAL  169 (263)
Q Consensus       100 ~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~  169 (263)
                      |.+..+++|++.|+++++++++++|||++++++.+++++++|+.+....|.+    .      ...|+++.+++.++.|+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~  168 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF  168 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998766521    1      12399999999999999


Q ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 024733          170 KSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIME-KNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLV  248 (263)
Q Consensus       170 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  248 (263)
                      +.+++||..  ++++.++.+.++|.+.++.+..++.....+ ++..+. .+....++..+..+...+..++..+...+.+
T Consensus       169 ~~~~qe~~~--~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~  245 (303)
T PF08449_consen  169 TGVYQEKLF--KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-IRFISAHPSVLLYLLLFSLTGALGQFFIFYL  245 (303)
T ss_pred             HHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999  778899999999999999999988886532 232221 1122334567788888999999999999999


Q ss_pred             HhccCceeEEeecc
Q 024733          249 TKHTSALTLQVCLT  262 (263)
Q Consensus       249 ~~~~s~~t~sv~g~  262 (263)
                      ++++||++.+++++
T Consensus       246 ~~~~~al~~t~v~t  259 (303)
T PF08449_consen  246 IKKFSALTTTIVTT  259 (303)
T ss_pred             HHhcCchhhhhHHH
Confidence            99999999998765

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.86  E-value=5.6e-22  Score=161.12  Aligned_cols=247  Identities=19%  Similarity=0.284  Sum_probs=206.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC------CcccchhhHHHHHHHHHH
Q 024733           12 LVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP------MQTIRSRLQFLKISALSF   83 (263)
Q Consensus        12 ~~~~~~~~s~~~~~~nK~~l~~--~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   83 (263)
                      ....+-.+|+.+.+.||++++.  ...+.|...+..|.+....++..+.+...+.|      .-++ +-+..++..|.++
T Consensus        32 ~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~l-dl~t~r~vlplsv  110 (347)
T KOG1442|consen   32 AVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQL-DLATARQVLPLSV  110 (347)
T ss_pred             hccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccc-cHHHHHhhcchhh
Confidence            3445667899999999999986  34678999999999999877666554433222      1122 3456788999999


Q ss_pred             HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC---CcchHHHHHHH
Q 024733           84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMC  160 (263)
Q Consensus        84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~  160 (263)
                      .+..+....|..++|.+++++++-|++..+|+.++.++++|||-+..-..++.+++.|-.+.+-+|   ...++.|.+++
T Consensus       111 Vfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifG  190 (347)
T KOG1442|consen  111 VFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFG  190 (347)
T ss_pred             eeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHH
Confidence            999999999999999999999999999999999999999999999999999999999999987777   45779999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHH
Q 024733          161 IAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF  240 (263)
Q Consensus       161 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  240 (263)
                      +.|.++-|+-.++.||..  ....-.-+.+++|.+..+.++.+|... ..|+....+...+.++..+|.++.++|+.+|.
T Consensus       191 VlaSl~vAlnaiytkk~l--~~v~~~iw~lt~ynnv~a~lLflpll~-lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~  267 (347)
T KOG1442|consen  191 VLASLAVALNAIYTKKVL--PPVGDCIWRLTAYNNVNALLLFLPLLI-LNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA  267 (347)
T ss_pred             HHHHHHHHHHHHhhheec--ccccCeehhhHHHHHHHHHHHHHHHHH-HcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence            999999999999999977  323334589999999999999999884 45655444333344567899999999999999


Q ss_pred             HHHHHHHHHhccCceeEEeecc
Q 024733          241 VNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       241 ~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      +|+.+..-+|.+||+|+.+.|+
T Consensus       268 mgyvTg~QIK~TSplThnISgT  289 (347)
T KOG1442|consen  268 MGYVTGWQIKVTSPLTHNISGT  289 (347)
T ss_pred             hhheeeEEEEecccceeeecHh
Confidence            9999999999999999999876

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.86  E-value=3.9e-21  Score=151.94  Aligned_cols=241  Identities=18%  Similarity=0.242  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHh
Q 024733           12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVF   91 (263)
Q Consensus        12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (263)
                      ....|..+|+.+++.||++++..||+....+.+.|.+.+.+.+.+ .+..|..+-|    ..+.|.+.|.+++.......
T Consensus        10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~i-Lk~l~~~~fR----~t~aK~WfpiSfLLv~MIyt   84 (309)
T COG5070          10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLI-LKFLRLVEFR----LTKAKKWFPISFLLVVMIYT   84 (309)
T ss_pred             HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHH-HHHHhHhhee----hhhhhhhcCHHHHHHHHHHh
Confidence            455899999999999999999999999999999999999877665 3443332221    34567788999999999999


Q ss_pred             hhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------cchHHHHHHHHHH
Q 024733           92 GNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--------SFHLFGFLMCIAA  163 (263)
Q Consensus        92 ~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a  163 (263)
                      ...|++|++++.++++|.++.+.++..+..++|.|.+-.+..+.++.+........+|.        ..| .|++|+...
T Consensus        85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~N  163 (309)
T COG5070          85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTN  163 (309)
T ss_pred             cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehh
Confidence            99999999999999999999999999999999999999999999999998888888885        245 499999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHH
Q 024733          164 TAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL  243 (263)
Q Consensus       164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  243 (263)
                      ++..+.+....|+-.  +-.+....+.++|.+..+.+.++..++..|.|....-.  ..........+..+|+++++..+
T Consensus       164 clssaafVL~mrkri--~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~a--nnl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         164 CLSSAAFVLIMRKRI--KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLA--NNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hHhHHHHHHHHHHhh--cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhh--cCCChHHHHHHHHHHHHHhhhhh
Confidence            999999998888766  55566778999999999999999999888777653211  12233445667889999999999


Q ss_pred             HHHHHHhccCceeEEeecc
Q 024733          244 TNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       244 ~~~~~~~~~s~~t~sv~g~  262 (263)
                      +.-.|++-+|.+|++++|+
T Consensus       240 ~saWcvrVtSSTtySMvGA  258 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGA  258 (309)
T ss_pred             ccceeEeehhhhHHHHHHH
Confidence            9999999999999999886

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.85  E-value=4.1e-19  Score=155.82  Aligned_cols=234  Identities=16%  Similarity=0.193  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhh-cCCcccchhhHHHHHHHHHHHHHHHHHhhhh
Q 024733           16 WYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKM-VPMQTIRSRLQFLKISALSFVFCISVVFGNV   94 (263)
Q Consensus        16 ~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (263)
                      -=.+..++..+.|..+++ +.+ |..+.++|+.++++++.++.+++++ ++.++. .++++......+++......+.+.
T Consensus        21 ~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~-~~~~~~~l~l~g~~g~~~~~~~~~   97 (358)
T PLN00411         21 TETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPL-SVSILSKIGLLGFLGSMYVITGYI   97 (358)
T ss_pred             HHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            336677888899999965 677 9999999999998887776655432 222222 234556666667666556668999


Q ss_pred             hccccchhHHHHHhhhHHHHHHHHHHHH------hhcccChhhHHHHhhhhhhheeeecc-CC-----------------
Q 024733           95 SLRFLPVSFNQAVGATTPFFTAVFAYLM------TLKREAWLTYVTLIPVVTGVIIASGG-EP-----------------  150 (263)
Q Consensus        95 sl~~~~~~~~~vi~~~~pi~~~i~~~~~------~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~-----------------  150 (263)
                      +++|++++.+.++.++.|++++++++++      +|||+++++++|++++++|+.+.... +.                 
T Consensus        98 gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~  177 (358)
T PLN00411         98 GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLS  177 (358)
T ss_pred             HHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccc
Confidence            9999999999999999999999999999      69999999999999999999876531 10                 


Q ss_pred             ------cch-HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCH-HHHHHHHHHHHHHHHHHHHHHhccccchhhhhccc
Q 024733          151 ------SFH-LFGFLMCIAATAARALKSVLQGILLSSEGEKLNS-MNLLLYMAPIAVVLLLPATLIMEKNVVGITLALAR  222 (263)
Q Consensus       151 ------~~~-~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~  222 (263)
                            ..+ ..|..++++++++||.|++..|+..    .++++ ...+.++...+...+.+.+...|+.+...+  ...
T Consensus       178 ~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~  251 (358)
T PLN00411        178 PPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW--IIH  251 (358)
T ss_pred             cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc--eec
Confidence                  112 4599999999999999999999987    34433 466777777777777666655554322211  112


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEe
Q 024733          223 DDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQV  259 (263)
Q Consensus       223 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv  259 (263)
                      ++...+. ++..++...+.....+.++++.+|...++
T Consensus       252 ~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~  287 (358)
T PLN00411        252 FDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAI  287 (358)
T ss_pred             cchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHH
Confidence            2222221 22233333333345578899999876553

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.84  E-value=9e-19  Score=147.86  Aligned_cols=220  Identities=15%  Similarity=0.117  Sum_probs=159.0

Q ss_pred             HHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccch
Q 024733           22 GVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPV  101 (263)
Q Consensus        22 ~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~  101 (263)
                      ......|+.+++ +.| |..+.+.|++.+.+.+.+..+. +  +    ++++..+.....++...++..+.+.|++++++
T Consensus         3 ~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         3 TTGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             chHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            344567998876 356 8888989988887766554332 2  1    23344444444455668888999999999999


Q ss_pred             hHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-CcchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 024733          102 SFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-PSFHLFGFLMCIAATAARALKSVLQGILLSS  180 (263)
Q Consensus       102 ~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~  180 (263)
                      +.++++.++.|+++++++.+++|||++++++.++.++++|+.+...++ .+.+..|+.++++++++++.+.++.|+..  
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~--  151 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV--  151 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh--
Confidence            999999999999999999999999999999999999999998876443 44557899999999999999999999987  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH-HHHHHHHHHHHhccCceeEEe
Q 024733          181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA-YFVNLTNFLVTKHTSALTLQV  259 (263)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~s~~t~sv  259 (263)
                      ++.+.++.....+....+.+.++|.....+.+..        .+...+..+...+.++ .......+..+++.++.+.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~  223 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI  223 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence            4344445566667788888888888754332221        1222333333333333 333344577888888876654


Q ss_pred             e
Q 024733          260 C  260 (263)
Q Consensus       260 ~  260 (263)
                      .
T Consensus       224 ~  224 (260)
T TIGR00950       224 L  224 (260)
T ss_pred             H
Confidence            3

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.84  E-value=4.4e-18  Score=146.71  Aligned_cols=230  Identities=14%  Similarity=0.202  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cccchhhHHHHHHHHHHHHHHHHHhhhhhccc
Q 024733           20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QTIRSRLQFLKISALSFVFCISVVFGNVSLRF   98 (263)
Q Consensus        20 s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~   98 (263)
                      ..+....++.+-++ |++.|...++.-++.-.++-.....+++..++ .+. .+++|++.+..+++...+..+.+.|++|
T Consensus        25 ~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~-~~~~~w~y~lla~~Dv~aN~~~v~a~~y  102 (334)
T PF06027_consen   25 ITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV-LKRPWWKYFLLALLDVEANYLVVLAYQY  102 (334)
T ss_pred             HHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh-cchhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            33444556666655 78889988877776544332222222221111 111 2344555667799999999999999999


Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC---------cchHHHHHHHHHHHHHHHH
Q 024733           99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP---------SFHLFGFLMCIAATAARAL  169 (263)
Q Consensus        99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~  169 (263)
                      ++++.+|++.++..+++++++++++|||+++.+++|++++++|+++....|.         +...+|.++++.++++||.
T Consensus       103 TsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~  182 (334)
T PF06027_consen  103 TSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAV  182 (334)
T ss_pred             ccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988876552         2347899999999999999


Q ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 024733          170 KSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVT  249 (263)
Q Consensus       170 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  249 (263)
                      ++++.|+..    ++.+..+.......++.+...+.....|......    .+++.....+++..++.-+......-..+
T Consensus       183 ~nV~~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~----~~w~~~~~~~~v~~~~~lf~~y~l~p~~l  254 (334)
T PF06027_consen  183 SNVLEEKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIES----IHWTSQVIGLLVGYALCLFLFYSLVPIVL  254 (334)
T ss_pred             HHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc----cCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988    3567889999999999999988877777555432    23444444444444444344433445678


Q ss_pred             hccCceeEEe
Q 024733          250 KHTSALTLQV  259 (263)
Q Consensus       250 ~~~s~~t~sv  259 (263)
                      +.+||+...+
T Consensus       255 ~~ssAt~~nL  264 (334)
T PF06027_consen  255 RMSSATFFNL  264 (334)
T ss_pred             HhCccceeeh
Confidence            8899886654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.83  E-value=3e-18  Score=147.24  Aligned_cols=240  Identities=18%  Similarity=0.192  Sum_probs=166.4

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHH
Q 024733            1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISA   80 (263)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (263)
                      |+.+.-+..++....-.+.+.+.....|...++  .| |..++++|+.++.+.+.++.+.+++ +.   +++++++....
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~~---~~~~~~~~~~~   73 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGH-PL---PTLRQWLNAAL   73 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCC-CC---CcHHHHHHHHH
Confidence            344444444555555666777778888999887  77 9999999999998877665554321 11   23445665666


Q ss_pred             HHHHH-HHHHHhhhhhc-cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc-CCcchHHHH
Q 024733           81 LSFVF-CISVVFGNVSL-RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG-EPSFHLFGF  157 (263)
Q Consensus        81 ~~~~~-~~~~~~~~~sl-~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~  157 (263)
                      .|.+. .....+.+.+. ++.+++.++++.++.|+++++++++ +|||++++++.+++++++|+.+...+ +.+.+..|.
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~  152 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGA  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHH
Confidence            66554 56677778888 9999999999999999999999986 69999999999999999999887543 334556899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHH
Q 024733          158 LMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL  237 (263)
Q Consensus       158 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  237 (263)
                      .++++++++||.+.+..||..  +  + ++...+.++...+...+.+.....+.+...      ..+...+..+...++.
T Consensus       153 l~~l~a~~~~a~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~l~i~  221 (292)
T PRK11272        153 ILILIASASWAFGSVWSSRLP--L--P-VGMMAGAAEMLAAGVVLLIASLLSGERLTA------LPTLSGFLALGYLAVF  221 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC--C--C-cchHHHHHHHHHHHHHHHHHHHHcCCcccc------cCCHHHHHHHHHHHHH
Confidence            999999999999999999864  2  2 345566788888888888876443322110      1122223233333332


Q ss_pred             H-HHHHHHHHHHHhccCceeEEe
Q 024733          238 A-YFVNLTNFLVTKHTSALTLQV  259 (263)
Q Consensus       238 ~-~~~~~~~~~~~~~~s~~t~sv  259 (263)
                      + ..-....+..+++.++.+.++
T Consensus       222 ~s~~~~~l~~~~~~~~~~~~~s~  244 (292)
T PRK11272        222 GSIIAISAYMYLLRNVRPALATS  244 (292)
T ss_pred             HHHHHHHHHHHHHhhcCHHHHHH
Confidence            2 222234456777777755443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.83  E-value=2.1e-18  Score=148.47  Aligned_cols=225  Identities=15%  Similarity=0.086  Sum_probs=151.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733           11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV   90 (263)
Q Consensus        11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (263)
                      +....-.+.+.+.....|..+++  +| |..++++|+.++.+++..+.   + +++.   ++++++..+..++.+.....
T Consensus         7 l~~l~a~~~Wg~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~---~-~~~~---~~~~~~~~~~~~l~~~~~~~   76 (295)
T PRK11689          7 LIGLIAILLWSTMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV---G-FPRL---RQFPKRYLLAGGLLFVSYEI   76 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc---c-cccc---ccccHHHHHHHhHHHHHHHH
Confidence            33334444555667788999988  77 99999999999987765432   1 1111   12233444455555566666


Q ss_pred             hhhhhcc----ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCc-----------chHH
Q 024733           91 FGNVSLR----FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS-----------FHLF  155 (263)
Q Consensus        91 ~~~~sl~----~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------~~~~  155 (263)
                      +.+.+++    +.+++.+.++.++.|+++++++++++|||++++++++++++++|+.++..++.+           .+..
T Consensus        77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~  156 (295)
T PRK11689         77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL  156 (295)
T ss_pred             HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence            7666664    467788899999999999999999999999999999999999999888655421           2346


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733          156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS  235 (263)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  235 (263)
                      |..++++++++||.|+++.||..    ++.++.....   ..+...+.+.... +++.. .     +.+...+..+...+
T Consensus       157 G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~-~-----~~~~~~~~~l~~~~  222 (295)
T PRK11689        157 SYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFL-SPQPA-M-----VFSLPAIIKLLLAA  222 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHH-hcCcc-c-----cCCHHHHHHHHHHH
Confidence            99999999999999999999976    3456654422   2333444443323 32221 0     12223333333444


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEe
Q 024733          236 ALAYFVNLTNFLVTKHTSALTLQV  259 (263)
Q Consensus       236 ~~~~~~~~~~~~~~~~~s~~t~sv  259 (263)
                      +.+.......+..+++.+|...++
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~  246 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLAT  246 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHH
Confidence            445555556678889988876554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.82  E-value=7.7e-18  Score=145.00  Aligned_cols=241  Identities=9%  Similarity=0.047  Sum_probs=159.3

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-c-ccchhhHHHHH
Q 024733            1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-Q-TIRSRLQFLKI   78 (263)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~   78 (263)
                      |...++.|.......-.+.+.......|.. ++  .| |..+.++|+.++.+.+..+...++..++ + +..+++++...
T Consensus         1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (296)
T PRK15430          1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFML   76 (296)
T ss_pred             CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHH
Confidence            455667777777776667777777777975 44  77 9999999999997765554433221111 0 00112222323


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHH
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL  158 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~  158 (263)
                      ...++..+.+..+.++|++++|++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+..    .
T Consensus        77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~  152 (296)
T PRK15430         77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----I  152 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----H
Confidence            344566678899999999999999999999999999999999999999999999999999999988754332222    4


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH
Q 024733          159 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA  238 (263)
Q Consensus       159 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  238 (263)
                      ++++++++||.|.++.||..  +++..+....+.++.+.+.....+..   +... ..   ..+.+...+..+...++.+
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~---~~~~~~~~~~~~~~~g~~t  223 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIA--VEAQTGMLIETMWLLPVAAIYLFAIA---DSST-SH---MGQNPMSLNLLLIAAGIVT  223 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHHHHc---cCCc-cc---ccCCcHHHHHHHHHHHHHH
Confidence            68889999999999999865  33334555666666666655543322   1111 00   0011111122233333334


Q ss_pred             HHHHHHHHHHHhccCceeEE
Q 024733          239 YFVNLTNFLVTKHTSALTLQ  258 (263)
Q Consensus       239 ~~~~~~~~~~~~~~s~~t~s  258 (263)
                      ..-..+.+...++.+|.+.+
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s  243 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLG  243 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHH
Confidence            44445567788888776544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.81  E-value=1.7e-17  Score=143.11  Aligned_cols=227  Identities=17%  Similarity=0.215  Sum_probs=148.1

Q ss_pred             HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHHHHhhhhh
Q 024733           17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CISVVFGNVS   95 (263)
Q Consensus        17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s   95 (263)
                      .+.+.+.....|..+++  .| |..++++|+.++.+.+..+.+    +++.      +++.....++.. .....+.+.+
T Consensus        13 ~~~Wg~~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~----~~~~------~~~~~~~~g~~~~~~~~~~~~~~   79 (299)
T PRK11453         13 VVVWGLNFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVA----RPKV------PLNLLLGYGLTISFGQFAFLFCA   79 (299)
T ss_pred             HHHHhhhHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhc----CCCC------chHHHHHHHHHHHHHHHHHHHHH
Confidence            44455666677999887  77 999999999987665443221    1111      123344445543 3444566778


Q ss_pred             ccc-cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC---CcchHHHHHHHHHHHHHHHHHH
Q 024733           96 LRF-LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMCIAATAARALKS  171 (263)
Q Consensus        96 l~~-~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~  171 (263)
                      +++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++   .+.+..|..++++++++++.+.
T Consensus        80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~  159 (299)
T PRK11453         80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGN  159 (299)
T ss_pred             HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            887 689999999999999999999999999999999999999999998876543   2334679999999999999999


Q ss_pred             HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHH-HHHHHHh
Q 024733          172 VLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL-TNFLVTK  250 (263)
Q Consensus       172 v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~  250 (263)
                      ++.||..+ ++...+......++...+.+.........|++.... .+..+.+...+..++..++++....+ ..+..++
T Consensus       160 v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~  237 (299)
T PRK11453        160 IFNKKIMS-HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG  237 (299)
T ss_pred             HHHHHHhc-ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999762 222233445556666666555555444444433110 11112333444444444433332222 2346667


Q ss_pred             ccCceeEE
Q 024733          251 HTSALTLQ  258 (263)
Q Consensus       251 ~~s~~t~s  258 (263)
                      +.+|.+.+
T Consensus       238 ~~~a~~~s  245 (299)
T PRK11453        238 RYETWRVA  245 (299)
T ss_pred             hCCHHHHH
Confidence            77765544

>TIGR00688 rarD rarD protein

Probab=99.79  E-value=6.9e-17  Score=136.23  Aligned_cols=159  Identities=9%  Similarity=-0.015  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC--cc---cchhhHHHHHHHHHHHHH
Q 024733           12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM--QT---IRSRLQFLKISALSFVFC   86 (263)
Q Consensus        12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~   86 (263)
                      ....-.+.+.......|. +++  .| |..+.++|++++.+.+.++...++++++  ++   .++++.+......+++..
T Consensus         6 ~~i~a~~~wg~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   81 (256)
T TIGR00688         6 VSLLASFLFGYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG   81 (256)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence            333444455566667798 455  77 9999999999998776554433221110  11   112222334555677778


Q ss_pred             HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHH
Q 024733           87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA  166 (263)
Q Consensus        87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~  166 (263)
                      .+..+.++|+++++++.++++.++.|+++++++++++|||+++++++++.++++|+.+...++.+.+    .++++++++
T Consensus        82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~  157 (256)
T TIGR00688        82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFS  157 (256)
T ss_pred             HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999999987754332222    357889999


Q ss_pred             HHHHHHHHHHhh
Q 024733          167 RALKSVLQGILL  178 (263)
Q Consensus       167 ~a~~~v~~k~~~  178 (263)
                      ++.|.+..||..
T Consensus       158 ~a~~~i~~~~~~  169 (256)
T TIGR00688       158 FTAYGLIRKALK  169 (256)
T ss_pred             HHHHHHHHhhcC
Confidence            999999999865

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1e-16  Score=132.62  Aligned_cols=220  Identities=17%  Similarity=0.248  Sum_probs=183.7

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 024733           35 GFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFF  114 (263)
Q Consensus        35 ~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~  114 (263)
                      .|..|..+.++|-+.+.+.......+.++.    .+.++.++++...++.+..+.++.+.|++|++-+...+.|++.-+.
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP  122 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP  122 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence            488899999999999988876655543332    2345667778788999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC---------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 024733          115 TAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP---------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKL  185 (263)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~  185 (263)
                      +++++.++.|+|++..+++...++..|+.+....+.         +.+++|+.++....+..++.+..++++.  +..++
T Consensus       123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf--~~~k~  200 (327)
T KOG1581|consen  123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLF--KKYKV  200 (327)
T ss_pred             HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh--ccCCc
Confidence            999999999999999999999999999988765431         2458999999999999999999999999  78899


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733          186 NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       186 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      ++++++++.+.++++...... +..+...+ ..+....++..+..+.+-+.++...+...|+.+++.+|+|.+.+.+
T Consensus       201 s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~-av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t  275 (327)
T KOG1581|consen  201 SSLHMMFGVNLFSAILNGTYL-ILQGHLLP-AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT  275 (327)
T ss_pred             cHhHHHHHHHHHHHHHHHHhh-hcCCCCch-HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence            999999999999999887774 33333222 2333455677888888888888888999999999999999877643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.75  E-value=1.4e-15  Score=130.80  Aligned_cols=228  Identities=14%  Similarity=0.058  Sum_probs=152.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH
Q 024733            6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF   85 (263)
Q Consensus         6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (263)
                      +.+.+.....-..++.......|+.+++  +| |..+.++|++++.+.+.++.+.++  +  +. ++++++.....+++.
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~--~--~~-~~~~~~~~~~~g~~~   81 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWR--L--RF-AKEQRLPLLFYGVSL   81 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHh--c--cC-CHHHHHHHHHHHHHH
Confidence            4556666555555556666689999998  77 999999999999877665433211  1  11 234455566777777


Q ss_pred             HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc--C-CcchHHHHHHHHH
Q 024733           86 CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG--E-PSFHLFGFLMCIA  162 (263)
Q Consensus        86 ~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~  162 (263)
                      .....+.+++++++|++.+.++..+.|+++++++    +||+++  ..++.++++|+.++...  + .+.+..|.+++++
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~  155 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALG  155 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHH
Confidence            7777888999999999999999999999999887    366554  44566778999876532  2 2345689999999


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH-HHH
Q 024733          163 ATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA-YFV  241 (263)
Q Consensus       163 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~  241 (263)
                      +++++|.|.+..||..    ++.++... .++...++..+.|.....++ ..       ..+...+..++.-++++ ...
T Consensus       156 aa~~~a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~-------~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        156 AGACWAIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAG-EA-------LWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccC-cc-------cCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999986    34556555 45667777777777644322 11       11222221222222222 222


Q ss_pred             HHHHHHHHhccCceeEEee
Q 024733          242 NLTNFLVTKHTSALTLQVC  260 (263)
Q Consensus       242 ~~~~~~~~~~~s~~t~sv~  260 (263)
                      ....+..+++.+|...++.
T Consensus       223 ~~l~~~~~~~~~a~~as~~  241 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTL  241 (293)
T ss_pred             HHHHHHHHHhcChhHHHHH
Confidence            2234677888887665543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.4e-17  Score=132.97  Aligned_cols=219  Identities=16%  Similarity=0.226  Sum_probs=181.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 024733           36 FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFT  115 (263)
Q Consensus        36 f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~  115 (263)
                      |.|...+.+.|+....+..-++..++++.+.+    +..-+.+...++-+-+....+|.+++|+|.++..+-|++.|+.+
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D----~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV  125 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRKKTEID----NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV  125 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeeccccccc----CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence            88889999999999987765544333322222    22345567778888899999999999999999999999999999


Q ss_pred             HHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC-------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHH
Q 024733          116 AVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM  188 (263)
Q Consensus       116 ~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~  188 (263)
                      ++++..+.|++++++++..++++++|+++..+.+.       +.-..|-++.+++....++....++|..  ..++.+..
T Consensus       126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrir--a~yq~~g~  203 (337)
T KOG1580|consen  126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIR--ASYQRTGT  203 (337)
T ss_pred             eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHH--HhhccCch
Confidence            99999999999999999999999999999987753       1224799999999999999999999987  77888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733          189 NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       189 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      .++.|.+.++.+.+-... .++|+.+.+.... +..+..++-+.+-++.+++.+.+.|..+...||+|.|++.+
T Consensus       204 ~MM~~~NlwStL~Lg~g~-lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTT  275 (337)
T KOG1580|consen  204 SMMFYTNLWSTLYLGAGL-LFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTT  275 (337)
T ss_pred             hhHHHHHHHHHHHhhhhh-eehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEee
Confidence            999999999998877666 5678877653322 33556777788888999999999999999999999999865

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.70  E-value=1.2e-14  Score=124.28  Aligned_cols=228  Identities=11%  Similarity=-0.005  Sum_probs=140.7

Q ss_pred             HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 024733           18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR   97 (263)
Q Consensus        18 ~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~   97 (263)
                      ++........|...++  -+ +.  .+.+.....+.+..+..++..++..+.++++++......++.......+.+.+++
T Consensus        11 ~~~a~~~~~~k~~~~~--~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   85 (281)
T TIGR03340        11 LMHAGWNLMAKSHADK--EP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYH   85 (281)
T ss_pred             HHHHHHHHHHhhcCCc--hh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444455566766654  12 32  3556655555544444332111111112344555555566667788899999999


Q ss_pred             ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 024733           98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-SFHLFGFLMCIAATAARALKSVLQGI  176 (263)
Q Consensus        98 ~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~l~a~~~~a~~~v~~k~  176 (263)
                      +.+++.++.+.++.|+++++++++++|||+++++++|+.++++|+.+...++. +.+..|..++++++++++.|.+..|+
T Consensus        86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340        86 HADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKA  165 (281)
T ss_pred             cCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccc
Confidence            99999999999999999999999999999999999999999999988765442 34567888999999999999998887


Q ss_pred             hhccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024733          177 LLSSEGEKLNSM----NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHT  252 (263)
Q Consensus       177 ~~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  252 (263)
                      ..    ++.++.    ..+.+..........+.....+.... .     ..+...+..+...++.+..-+...+..+++.
T Consensus       166 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~  235 (281)
T TIGR03340       166 AA----LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-F-----PYARQILPSATLGGLMIGGAYALVLWAMTRL  235 (281)
T ss_pred             cc----cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-h-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            54    222222    22222222221111121111111110 0     1111223334444444444555567888888


Q ss_pred             CceeEEee
Q 024733          253 SALTLQVC  260 (263)
Q Consensus       253 s~~t~sv~  260 (263)
                      ++...+..
T Consensus       236 ~a~~~~~~  243 (281)
T TIGR03340       236 PVATVVAL  243 (281)
T ss_pred             CceEEEee
Confidence            88766654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.2e-16  Score=130.19  Aligned_cols=252  Identities=17%  Similarity=0.196  Sum_probs=205.7

Q ss_pred             CCchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHH
Q 024733            2 KSSSKLFTFGLVAA-WYSSNIGVLLLNKYLLSNYGFR-YPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKIS   79 (263)
Q Consensus         2 ~~~~~~~~~~~~~~-~~~~s~~~~~~nK~~l~~~~f~-~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (263)
                      .+.++|.+.+.|.+ .++.-...-...+++++..+|. +.+.+++.|+++-....++-+.  ..++++   +...||...
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k~---r~iP~rtY~  110 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTKR---RVIPWRTYV  110 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eecccc---eecchhHhh
Confidence            35678888887665 4455556667888899888886 8899999999877554443222  112222   234577777


Q ss_pred             HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC----cchHH
Q 024733           80 ALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP----SFHLF  155 (263)
Q Consensus        80 ~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~----~~~~~  155 (263)
                      ..+.+..+.+.++|.|+.|++.+...++|++.-+.+++.+.++-++|++...+.+..+...|.+.....|.    ++|..
T Consensus       111 ~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~  190 (367)
T KOG1582|consen  111 ILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLI  190 (367)
T ss_pred             hhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCccee
Confidence            88888889999999999999999999999999999999999999999999999999999999999887774    57889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733          156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS  235 (263)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  235 (263)
                      |+.+.-+|.++.|.-...+++.+  +.++-+..|+++|....+.++++..+ ..+|+..+.|....+.+.....+..+-+
T Consensus       191 Gv~mIsgALl~DA~iGNvQEk~m--~~~~~ss~EmvfySy~iG~vflf~~m-vlTge~f~a~~fcaehp~~tyGy~~~~s  267 (367)
T KOG1582|consen  191 GVMMISGALLADAVIGNVQEKAM--KMNPASSSEMVFYSYGIGFVFLFAPM-VLTGELFSAWTFCAEHPVRTYGYAFLFS  267 (367)
T ss_pred             eHHHHHHHHHHHHHhhHHHHHHH--hhCCCCcceEEEeeecccHHHHHHHH-HhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence            99999999999999988888888  66677889999999999999998888 4578877766655565666777888888


Q ss_pred             HHHHHHHHHHHHHHhccCceeEEeec
Q 024733          236 ALAYFVNLTNFLVTKHTSALTLQVCL  261 (263)
Q Consensus       236 ~~~~~~~~~~~~~~~~~s~~t~sv~g  261 (263)
                      ..+|+...+-...++..+|.+.+.+.
T Consensus       268 ~~gylG~~~VLalI~~fGA~~aatvT  293 (367)
T KOG1582|consen  268 LAGYLGIVFVLALIKLFGALIAATVT  293 (367)
T ss_pred             HHhHhhHHHHHHHHHHhchhHHHHHH
Confidence            88888888888999999998876554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.62  E-value=3.5e-14  Score=120.74  Aligned_cols=182  Identities=21%  Similarity=0.293  Sum_probs=142.4

Q ss_pred             HHHHHHHHHH----HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--
Q 024733           77 KISALSFVFC----ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--  150 (263)
Q Consensus        77 ~~~~~~~~~~----~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--  150 (263)
                      +..-.+++++    .....+|.|+.+++++..+++.++.-+|+..++.++..||.|..|.+++.+.+.|+++++.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            4555566665    4566788999999999999999999999999999999999999999999999999999987743  


Q ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccc
Q 024733          151 ------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDD  224 (263)
Q Consensus       151 ------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  224 (263)
                            +....|.++++++++.||.|.++.||..++++.+.|.-....+..++..+++.|...+.+........ . +..
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~-l-P~~  314 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-L-PSS  314 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-C-CCC
Confidence                  23478999999999999999999999997666799999999999999999999887665433221111 1 112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733          225 VKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVC  260 (263)
Q Consensus       225 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~  260 (263)
                      ..+-..+..+++..++--+......-.|||++.++.
T Consensus       315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tlg  350 (416)
T KOG2765|consen  315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLG  350 (416)
T ss_pred             ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheee
Confidence            222233344455556666666788888888887654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.62  E-value=3.8e-14  Score=118.16  Aligned_cols=168  Identities=17%  Similarity=0.226  Sum_probs=132.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC
Q 024733           71 SRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP  150 (263)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~  150 (263)
                      +|+.++ +...+++|+....+.+.++++++++.+|+++.+..+++++++++++|||.++++|.++.+.++|+.+...++.
T Consensus        14 ~~~~~~-~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   14 PKDTLK-LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            344444 5556899999999999999999999999999999999999999999999999999999999999998754321


Q ss_pred             ---------c--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 024733          151 ---------S--------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNV  213 (263)
Q Consensus       151 ---------~--------~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~  213 (263)
                               +        ....|+...+.++++.++..++.+|.+  |+++.+.+..+.....++.++.++.....|++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~l--K~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~  170 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLL--KRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA  170 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence                     0        125899999999999999999999999  666778888888888888888888775555544


Q ss_pred             chhhhhccccchHHHHHHHHHHHHHHHH
Q 024733          214 VGITLALARDDVKIIWYLLFNSALAYFV  241 (263)
Q Consensus       214 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~  241 (263)
                      .........++...+..+...++.|...
T Consensus       171 ~~~~g~f~G~~~~~~~~i~~~a~gGllv  198 (244)
T PF04142_consen  171 ISESGFFHGYSWWVWIVIFLQAIGGLLV  198 (244)
T ss_pred             cccCCchhhcchHHHHHHHHHHHhhHHH
Confidence            3322223344555555556666555544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.55  E-value=2e-11  Score=104.10  Aligned_cols=180  Identities=18%  Similarity=0.178  Sum_probs=127.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHH
Q 024733            8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCI   87 (263)
Q Consensus         8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (263)
                      +.......+...+.......|...++ ..+ +....+.|...+....... ..+++...++ ..++.++..+..++....
T Consensus         7 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (292)
T COG0697           7 LGLLALLLWGLLWGLSFIALKLAVES-LDP-FLFAAALRFLIAALLLLPL-LLLEPRGLRP-ALRPWLLLLLLALLGLAL   82 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-cCC-hHHHHHHHHHHHHHHHHHH-HHhhcccccc-cccchHHHHHHHHHHHHH
Confidence            33444444555555555666766665 223 5566666988887662222 2222111111 122233445555666678


Q ss_pred             HHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-HHhhcccChhhHHHHhhhhhhheeeeccCCcc---hHHHHHHHHHH
Q 024733           88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY-LMTLKREAWLTYVTLIPVVTGVIIASGGEPSF---HLFGFLMCIAA  163 (263)
Q Consensus        88 ~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~-~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~l~a  163 (263)
                      ...+.+.++++++++.++.+.++.|+++.++++ +++|||++++++.+..+++.|+.++..++...   +..|..+++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a  162 (292)
T COG0697          83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAA  162 (292)
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHH
Confidence            889999999999999999999999999999997 66799999999999999999999998776543   35899999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCHHHHHH-HHHH
Q 024733          164 TAARALKSVLQGILLSSEGEKLNSMNLLL-YMAP  196 (263)
Q Consensus       164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~-~~~~  196 (263)
                      +++++.+.+..|+..     +.++..... ++..
T Consensus       163 ~~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~  191 (292)
T COG0697         163 ALLWALYTALVKRLS-----RLGPVTLALLLQLL  191 (292)
T ss_pred             HHHHHHHHHHHHHhc-----CCChHHHHHHHHHH
Confidence            999999999999864     445555555 4444

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.44  E-value=1.5e-12  Score=106.69  Aligned_cols=226  Identities=19%  Similarity=0.246  Sum_probs=164.6

Q ss_pred             HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccc-cchh
Q 024733           24 LLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRF-LPVS  102 (263)
Q Consensus        24 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~-~~~~  102 (263)
                      ...-+.+.++ +-..-..+++.|+++.+.-.++.---....| +    +...|.++..-..+.....++|.++++ +|.+
T Consensus        19 vv~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k-~----kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~P   92 (330)
T KOG1583|consen   19 VVFLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVK-P----KIPLKDYAITVAMFFIVNVTNNYALKFNIPMP   92 (330)
T ss_pred             HHHHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccC-C----CCchhhhheehheeeeeeeeccceeeecccce
Confidence            3444555554 2223478999999988766554321111111 2    233444555555566677899999999 7999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc---CCc--------------ch--HHHHHHHHHH
Q 024733          103 FNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG---EPS--------------FH--LFGFLMCIAA  163 (263)
Q Consensus       103 ~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~---~~~--------------~~--~~G~~~~l~a  163 (263)
                      ...++|+-.++.+|++++++.|+|++.+|+.+.+++.+|+.+.+..   |..              ..  ..|+.+...|
T Consensus        93 lHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~a  172 (330)
T KOG1583|consen   93 LHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFA  172 (330)
T ss_pred             EEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999887532   210              11  3688999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhc-----------cccchHHHHHHH
Q 024733          164 TAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLAL-----------ARDDVKIIWYLL  232 (263)
Q Consensus       164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~  232 (263)
                      .+..|...+++++..  +++.-++-|.++|+...+.++.+..    ..+-.+.+...           ....+..+.+++
T Consensus       173 l~~sa~mgiyqE~~Y--~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl  246 (330)
T KOG1583|consen  173 LLLSAYMGIYQETTY--QKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL  246 (330)
T ss_pred             HHHHHHHHHHHHHHH--HHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence            999999999999999  6667799999999998875544332    22221211111           112357889999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCceeEEeec
Q 024733          233 FNSALAYFVNLTNFLVTKHTSALTLQVCL  261 (263)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~s~~t~sv~g  261 (263)
                      .+++.-+++.-.-+.+..+++++|.+++-
T Consensus       247 ~n~L~Qy~CikgVy~L~te~~sLTVTlvl  275 (330)
T KOG1583|consen  247 FNVLTQYFCIKGVYILTTETSSLTVTLVL  275 (330)
T ss_pred             HHHHHHHHHHHhhhhhhceecceEEEEee
Confidence            99999999988889999999999999864

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.41  E-value=8.5e-12  Score=102.48  Aligned_cols=242  Identities=17%  Similarity=0.141  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHH-HhhcCCc-------ccchhh--H--HHHH
Q 024733           16 WYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAW-MKMVPMQ-------TIRSRL--Q--FLKI   78 (263)
Q Consensus        16 ~~~~s~~~~~~nK~~l~~-----~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~--~--~~~~   78 (263)
                      ..+++...++..||.=+.     .+|+.|+..+..- +++-..++.+.+. +++...+       ...+.+  +  -+.+
T Consensus        11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~m-FlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lf   89 (372)
T KOG3912|consen   11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLM-FLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLF   89 (372)
T ss_pred             hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCccee
Confidence            344555556778886542     3477888776544 4554333332222 2221111       011111  1  2335


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--------  150 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------  150 (263)
                      ++-+++...+..+.+.++.+++++.+|++|....+|+.+++.-+++++++.++|.++..+..|+.++...|.        
T Consensus        90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~  169 (372)
T KOG3912|consen   90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT  169 (372)
T ss_pred             cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc
Confidence            567899988999999999999999999999999999999999999999999999999999999988865541        


Q ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH----HHHHHHhccccc-----hhhhh
Q 024733          151 --SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLL----LPATLIMEKNVV-----GITLA  219 (263)
Q Consensus       151 --~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l----l~~~~~~~~~~~-----~~~~~  219 (263)
                        +.-..|..+.+.|.+.-|.+.++.+|.+  +.++.+|.+...|...++.+.+    .|+.+...+...     ..+.+
T Consensus       170 d~s~iitGdllIiiaqiivaiQ~v~Eek~l--~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD  247 (372)
T KOG3912|consen  170 DYSSIITGDLLIIIAQIIVAIQMVCEEKQL--KKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED  247 (372)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHHHhhh--hhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence              1225799999999999999999999999  7789999999999999995543    333322222111     11111


Q ss_pred             ccc------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733          220 LAR------DDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVC  260 (263)
Q Consensus       220 ~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~  260 (263)
                      ..+      ..+.....+...-+--.++|+.+..+.|..|++|..+.
T Consensus       248 ~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmll  294 (372)
T KOG3912|consen  248 WGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLL  294 (372)
T ss_pred             HHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHH
Confidence            110      11111111111112225689999999999999987654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.40  E-value=1.1e-12  Score=97.79  Aligned_cols=121  Identities=18%  Similarity=0.360  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-HHHHHHhhhhhccc
Q 024733           20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSLRF   98 (263)
Q Consensus        20 s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~   98 (263)
                      +......+|...++  .| |...+++|+..+.+ ..+.....++.+.++. +++++......+.+ ...+..+.+.++++
T Consensus         3 ~a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    3 WAIYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNL-SPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             eeeHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCC-ChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            34566788999998  77 99999999999987 4444444333222222 33444555555655 57899999999999


Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733           99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA  145 (263)
Q Consensus        99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~  145 (263)
                      .+++.++++..+.|+++.+++++++||++++++++++.++++|+.+.
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.37  E-value=5.1e-10  Score=95.51  Aligned_cols=219  Identities=14%  Similarity=0.206  Sum_probs=156.3

Q ss_pred             HHHHHHHHHHHHHhhhCC--CCchHHHHHHHHHHHHHHHHHHHHHH-h---hcCCcccc------hhhHHHHHHHHHHHH
Q 024733           18 SSNIGVLLLNKYLLSNYG--FRYPIFLTMCHMTACSLLSYIAIAWM-K---MVPMQTIR------SRLQFLKISALSFVF   85 (263)
Q Consensus        18 ~~s~~~~~~nK~~l~~~~--f~~p~~l~~~r~~~~~~~~~~~~~~~-~---~~~~~~~~------~~~~~~~~~~~~~~~   85 (263)
                      .-..++.+..|+.-.+++  |. |.+..++-=++-.+.+....... |   .++.+.++      +++..+ +...++.|
T Consensus        25 ~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk-~~vPa~iY  102 (345)
T KOG2234|consen   25 AQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK-VSVPALIY  102 (345)
T ss_pred             HHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH-HHHHHHHH
Confidence            445566667777666543  44 55555444444444333322221 1   11111111      223444 45558899


Q ss_pred             HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-----------CcchH
Q 024733           86 CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-----------PSFHL  154 (263)
Q Consensus        86 ~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-----------~~~~~  154 (263)
                      ++.+.+.+.++.+.+++++|+...+....++++..++++||.++++|.++.+.++|+.+...++           .+..+
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~  182 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF  182 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence            9888899999999999999999999999999999999999999999999999999999876221           12347


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh-ccccchHHHHHHHH
Q 024733          155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA-LARDDVKIIWYLLF  233 (263)
Q Consensus       155 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  233 (263)
                      .|....+.+++..++..++.++.+  |+.+.+.+..+.-...++.++.+......|++... +.. .+.++...|..++.
T Consensus       183 ~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl~  259 (345)
T KOG2234|consen  183 LGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVLL  259 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHHHHH
Confidence            899999999999999999999999  77888888888888888888888877666777654 322 33455566666666


Q ss_pred             HHHHHHHH
Q 024733          234 NSALAYFV  241 (263)
Q Consensus       234 ~~~~~~~~  241 (263)
                      .+.-|.+.
T Consensus       260 ~a~gGLlv  267 (345)
T KOG2234|consen  260 NAVGGLLV  267 (345)
T ss_pred             HhccchhH
Confidence            66555443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.33  E-value=8.4e-12  Score=96.85  Aligned_cols=107  Identities=35%  Similarity=0.562  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccc-----cchHH
Q 024733          156 GFLMCIAATAARALKSVLQGILLSSE---GEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALAR-----DDVKI  227 (263)
Q Consensus       156 G~~~~l~a~~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-----~~~~~  227 (263)
                      |+++++.+.++.|+++++.|+.++++   +++.++.++..|.++.+.+.++|.++..|++..........     .+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78999999999999999999999431   36899999999999999999999998888776433221111     14577


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733          228 IWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT  262 (263)
Q Consensus       228 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~  262 (263)
                      +..++.+|+.++++|++.+.+++++||+|++++|+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~  115 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGN  115 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHH
Confidence            88899999999999999999999999999999885

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.30  E-value=7.4e-10  Score=95.08  Aligned_cols=167  Identities=18%  Similarity=0.133  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhh
Q 024733           15 AWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNV   94 (263)
Q Consensus        15 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (263)
                      .-.+++.+.....|.+-   +.+ +....  |..++.+....+....+. +++  +.++.+..-+..|+..+.+..+...
T Consensus         8 ia~~~wGs~g~~~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~~~--~~~~~~~~g~l~G~~w~ig~~~~~~   78 (290)
T TIGR00776         8 IPALFWGSFVLINVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVL-PEF--WALSIFLVGLLSGAFWALGQINQFK   78 (290)
T ss_pred             HHHHHHhhhHHHHhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhC-Ccc--cccHHHHHHHHHHHHHHhhhhhHHH
Confidence            33444556666667765   365 43332  677776665544333331 211  2233344445556667888899999


Q ss_pred             hccccchhHHHHHhh-hHHHHHHHHHHHHhhcccChhh----HHHHhhhhhhheeeeccCCc-------ch-HHHHHHHH
Q 024733           95 SLRFLPVSFNQAVGA-TTPFFTAVFAYLMTLKREAWLT----YVTLIPVVTGVIIASGGEPS-------FH-LFGFLMCI  161 (263)
Q Consensus        95 sl~~~~~~~~~vi~~-~~pi~~~i~~~~~~~~~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l  161 (263)
                      |.++++++.+..+-+ +.|+++.+.+.+++|||.++++    ++++++.++|+.+....+.+       .+ .+|.++++
T Consensus        79 ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l  158 (290)
T TIGR00776        79 SMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLL  158 (290)
T ss_pred             HHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHH
Confidence            999999999999988 8888999999999999999999    99999999999988653311       33 68999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q 024733          162 AATAARALKSVLQGILLSSEGEKLNSMNLLLYMAP  196 (263)
Q Consensus       162 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~  196 (263)
                      +++++|+.|.+..|+.      +.||.+..+.+..
T Consensus       159 ~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~  187 (290)
T TIGR00776       159 MSTIGYLVYVVVAKAF------GVDGLSVLLPQAI  187 (290)
T ss_pred             HHHHHHHHHHHHHHHc------CCCcceehhHHHH
Confidence            9999999999999973      3677777444443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.29  E-value=4.2e-11  Score=87.19  Aligned_cols=133  Identities=14%  Similarity=0.025  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733           11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV   90 (263)
Q Consensus        11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (263)
                      .+...-.+......++.|.-+++  .| |.+-+++|.+...+.+..+....|+.+...--.++.|......|+..+.+..
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            34444555666777899999998  55 9999999999988877776665554332211133456666677777788999


Q ss_pred             hhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           91 FGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        91 ~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +++.+++-.++|...-+-.+.|.++.+++++++|||+|.++++|+.++.+|+.+.+
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999998875

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.26  E-value=1.4e-11  Score=100.00  Aligned_cols=224  Identities=15%  Similarity=0.165  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 024733           17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSL   96 (263)
Q Consensus        17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl   96 (263)
                      .++..+..+.+.++-+. +.+-|...+++....-+++--.+..+++  +    .-+..|++.+..++...=+......|.
T Consensus        27 SL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~----~~~~~~~hYilla~~DVEaNy~vV~Ay   99 (336)
T KOG2766|consen   27 SLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--K----YIKAKWRHYILLAFVDVEANYFVVKAY   99 (336)
T ss_pred             HHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--H----HHHHHHHHhhheeEEeecccEEEeeeh
Confidence            35556666777887765 4777887777766544333222222222  1    134456667777777666677778899


Q ss_pred             cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------cchHHHHHHHHHHHHHHH
Q 024733           97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--------SFHLFGFLMCIAATAARA  168 (263)
Q Consensus        97 ~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a  168 (263)
                      ||++....+.+-+-..+.+++++|+++|.|+...++.|++++++|+.+....|.        +...+|.+++++++.+||
T Consensus       100 QyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYa  179 (336)
T KOG2766|consen  100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYA  179 (336)
T ss_pred             hhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeee
Confidence            999999999999999999999999999999999999999999999999877652        234689999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHH-HH
Q 024733          169 LKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTN-FL  247 (263)
Q Consensus       169 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~  247 (263)
                      ..++..+.+.    ++.+..+++....+++++...+= +..|..+..    .-+||.....++. .. +..++-++. =.
T Consensus       180 VSNv~EEflv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~----tl~w~~~i~~yl~-f~-L~MFllYsl~pi  248 (336)
T KOG2766|consen  180 VSNVSEEFLV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVS----TLHWDSAIFLYLR-FA-LTMFLLYSLAPI  248 (336)
T ss_pred             eccccHHHHH----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhcccee----eEeehHHHHHHHH-HH-HHHHHHHHhhHH
Confidence            9999999888    68899999999999998887766 355555532    2245544444444 22 222222332 35


Q ss_pred             HHhccCceeEE
Q 024733          248 VTKHTSALTLQ  258 (263)
Q Consensus       248 ~~~~~s~~t~s  258 (263)
                      ++|..|++.+.
T Consensus       249 l~k~~~aT~~n  259 (336)
T KOG2766|consen  249 LIKTNSATMFN  259 (336)
T ss_pred             heecCCceEEE
Confidence            56666766554

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.19  E-value=1.4e-08  Score=84.56  Aligned_cols=191  Identities=11%  Similarity=0.012  Sum_probs=137.4

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc-cchhhHHHHH
Q 024733            1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QT-IRSRLQFLKI   78 (263)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~   78 (263)
                      |+ ....+.+.....-++.++.+-++.|.+-.   .| +..+..-|.+.+.....++....|+.+. .+ .++.+.+...
T Consensus         1 ~~-~~~~~Gil~~l~Ay~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~   75 (293)
T COG2962           1 MA-KDSRKGILLALLAYLLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLML   75 (293)
T ss_pred             CC-CcccchhHHHHHHHHHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHH
Confidence            44 33456666666777788888888888754   66 8899999998887665554444332211 11 1112234444


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHH
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL  158 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~  158 (263)
                      ...++.-+.+.+.+.+|.....+-.+++--...|++..+++.+++|||+++.|++++.+..+||..-.....+.++....
T Consensus        76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~  155 (293)
T COG2962          76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA  155 (293)
T ss_pred             HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence            55566667888999999999888888888999999999999999999999999999999999999887777778876665


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733          159 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT  206 (263)
Q Consensus       159 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  206 (263)
                      +    ++++++|...-|+      .++|+.+....-...-.+..+...
T Consensus       156 l----a~sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl  193 (293)
T COG2962         156 L----ALSFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYL  193 (293)
T ss_pred             H----HHHHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHH
Confidence            4    5688999865555      357777666655544444444443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.18  E-value=8.2e-11  Score=86.71  Aligned_cols=107  Identities=15%  Similarity=0.205  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-ccchhhHHHHHHHHHHHH-HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHH
Q 024733           44 MCHMTACSLLSYIAIAWMKMVPMQ-TIRSRLQFLKISALSFVF-CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL  121 (263)
Q Consensus        44 ~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~  121 (263)
                      .+|+.++.+.+..+...+++.++. +..+++.+......+... ..+..+..+|+++.+ +.+..+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            478888877766655543322111 111223344445546555 488899999999999 58889999999999999999


Q ss_pred             HhhcccChhhHHHHhhhhhhheeeeccCCc
Q 024733          122 MTLKREAWLTYVTLIPVVTGVIIASGGEPS  151 (263)
Q Consensus       122 ~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~  151 (263)
                      ++|||++++++.++.++++|+.++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999877754

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.14  E-value=6.8e-12  Score=102.42  Aligned_cols=192  Identities=16%  Similarity=0.215  Sum_probs=138.0

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHH
Q 024733            2 KSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISAL   81 (263)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (263)
                      |++++....+.... ++.+.++.+..|.+..+     |..+.-.|++.-.+..+....+ .+.+.  ..++..++.++..
T Consensus        33 ~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy-~~~~v--~gp~g~R~~LiLR  103 (346)
T KOG4510|consen   33 KDKPNLGLLLLTVS-YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIY-YMQPV--IGPEGKRKWLILR  103 (346)
T ss_pred             cCCCccCceehhhH-HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEE-Eeeee--ecCCCcEEEEEee
Confidence            34555666666666 66777777777776543     8888888866554443332111 11111  0111222334455


Q ss_pred             HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-----C------
Q 024733           82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-----P------  150 (263)
Q Consensus        82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-----~------  150 (263)
                      ++....+....++|++|.+.+.+.+|....|.++.+++|.++|||.|+...++..+.+.||.++.-++     .      
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~  183 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDS  183 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccc
Confidence            77777788899999999999999999999999999999999999999999999999999999986432     1      


Q ss_pred             ---cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733          151 ---SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT  206 (263)
Q Consensus       151 ---~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  206 (263)
                         +.+.+|...++.+++..|--.++.|++-    ++.|....+.|-...+.+..+...
T Consensus       184 s~~~~~~~gt~aai~s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~  238 (346)
T KOG4510|consen  184 SQVEYDIPGTVAAISSVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGC  238 (346)
T ss_pred             ccccccCCchHHHHHhHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHH
Confidence               2345788888888888888888888865    566767677777777766665554

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.14  E-value=1.3e-08  Score=82.91  Aligned_cols=165  Identities=18%  Similarity=0.143  Sum_probs=130.4

Q ss_pred             HHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 024733           26 LNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQ  105 (263)
Q Consensus        26 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~  105 (263)
                      +.|.++..  ++ |.-.+.+|..++++++..+.|..+++     ..+++++.....|......+.+++.|++.+|.+.+.
T Consensus        30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr~r-----~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV  101 (292)
T COG5006          30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWRRR-----LSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV  101 (292)
T ss_pred             HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHHhc-----cChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence            55888877  44 89999999999998877766644322     245678888999999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee--ccC-CcchHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 024733          106 AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS--GGE-PSFHLFGFLMCIAATAARALKSVLQGILLSSEG  182 (263)
Q Consensus       106 vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~--~~~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~  182 (263)
                      -+-.+-|+.++.++    .||.  +..+.+.+.+.|+.+..  .++ .+.|+.|..+++.+..+|+.|.+..||.-    
T Consensus       102 AiEF~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g----  171 (292)
T COG5006         102 AIEFTGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG----  171 (292)
T ss_pred             hhhhccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc----
Confidence            99999999887654    3444  34444555666776553  222 45789999999999999999999999965    


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 024733          183 EKLNSMNLLLYMAPIAVVLLLPATLI  208 (263)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~ll~~~~~  208 (263)
                      ...+....+..-...+++..+|+...
T Consensus       172 ~~~~g~~g~a~gm~vAaviv~Pig~~  197 (292)
T COG5006         172 RAEHGTAGVAVGMLVAALIVLPIGAA  197 (292)
T ss_pred             ccCCCchHHHHHHHHHHHHHhhhhhh
Confidence            35567778888899999999999853

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.04  E-value=1.4e-08  Score=85.63  Aligned_cols=134  Identities=13%  Similarity=0.042  Sum_probs=98.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-
Q 024733            6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-   84 (263)
Q Consensus         6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   84 (263)
                      ..+...+...-.++........|...++.+.+ +.....+|+.++.+.+.......+. + +.. +++.+...+..+++ 
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-N-PQA-LSLQWGALLYLGLIG  201 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc-chHHHHHHHHHHHHH
Confidence            34555555566667777778889988764333 4455557888887776655443321 1 121 23344444445554 


Q ss_pred             HHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhe
Q 024733           85 FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVI  143 (263)
Q Consensus        85 ~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~  143 (263)
                      ...+..+.++++++.+++.++.+..+.|+++++++++++||+++..++.|..+++.|+.
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            46888999999999999999999999999999999999999999999999999999863

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.72  E-value=2.3e-08  Score=78.49  Aligned_cols=106  Identities=16%  Similarity=0.223  Sum_probs=95.7

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--
Q 024733           73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--  150 (263)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--  150 (263)
                      ...++..|.+++-.+....+..+++.++++.++-+.++.-.|+.++++..+|+|...-++++.++.+.|+.++.+.|.  
T Consensus        51 ~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   51 LFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             eeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            334555677777778888888999999999999999999999999999999999999999999999999999997764  


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024733          151 SFHLFGFLMCIAATAARALKSVLQGILL  178 (263)
Q Consensus       151 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~  178 (263)
                      ..++.|+..++++++..|+|-+..|+..
T Consensus       131 a~e~iGi~~AV~SA~~aAlYKV~FK~~i  158 (290)
T KOG4314|consen  131 ADEIIGIACAVGSAFMAALYKVLFKMFI  158 (290)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999998

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.68  E-value=8.1e-07  Score=78.36  Aligned_cols=134  Identities=8%  Similarity=0.040  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc--ccchhhHHHHHHHHHHHHHHHH
Q 024733           12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ--TIRSRLQFLKISALSFVFCISV   89 (263)
Q Consensus        12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   89 (263)
                      ..+.-.+++...++..|...++  +|.+...++++..++.+...+........+.+  ...........+..++..++.+
T Consensus       193 l~l~aa~~wa~~~il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay  270 (358)
T PLN00411        193 LLTIQGIFVSVSFILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYY  270 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHH
Confidence            3333445555666777887776  66456778888887766654433332211111  0001111111222344445678


Q ss_pred             HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      .+.++++++.+++.+.+...+.|++++++++++++|+++..+++|.++++.|+.+...
T Consensus       271 ~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        271 VIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999999999999988753

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.58  E-value=1.7e-06  Score=74.34  Aligned_cols=132  Identities=13%  Similarity=0.049  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-HHHHH
Q 024733           11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISV   89 (263)
Q Consensus        11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   89 (263)
                      +....-.++.......+|..-+.   + +...+.+|+.++...+.+.....+. +....++.+.+......+++ ..+.+
T Consensus       153 l~~l~a~~~~a~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        153 ILILIASASWAFGSVWSSRLPLP---V-GMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC---c-chHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHHHH
Confidence            33333334444445556664321   2 5567788888887766554333221 11111223445555555654 45788


Q ss_pred             HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      .+.++++++.+++.+.++..++|++.+++++++++|+++..+++|..+++.|+.+...
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999987654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.52  E-value=1.4e-06  Score=63.83  Aligned_cols=64  Identities=11%  Similarity=0.131  Sum_probs=59.3

Q ss_pred             HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +++.....+...+++..|.+.+..+-++.|+++.+.+++++|||++.++++|+.++++|+.+..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4466788899999999999999999999999999999999999999999999999999997754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.50  E-value=5.2e-06  Score=71.42  Aligned_cols=130  Identities=10%  Similarity=-0.000  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHH
Q 024733           10 FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CIS   88 (263)
Q Consensus        10 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   88 (263)
                      .+....-.++.....+..|...++  .+ |.... .+..++.+.+..+......  ... .+...+...+..+++. .+.
T Consensus       150 ~ll~l~aa~~~a~~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        150 AALALGAGACWAIYILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQAG--EAL-WHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHccC--ccc-CCHHHHHHHHHHHHHHHHHH
Confidence            334444445555666777887665  44 66554 4555555554443333221  111 1222333334445544 578


Q ss_pred             HHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           89 VVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        89 ~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +.+.++++++.+++.++++..++|++..++++++++|+++..+++|..++++|+....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999987763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.48  E-value=1.4e-05  Score=61.72  Aligned_cols=132  Identities=10%  Similarity=0.045  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc---c-----c-hhhHHHHH
Q 024733           14 AAWYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QT---I-----R-SRLQFLKI   78 (263)
Q Consensus        14 ~~~~~~s~~~~~~nK~~l~~-----~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~---~-----~-~~~~~~~~   78 (263)
                      +....+...-....|..+++     .+.+ |..+.......+.+.+.+.....+..+. +.   .     . ..+.+...
T Consensus         6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (153)
T PF03151_consen    6 LASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLL   84 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHH
Confidence            34445555666677887777     4677 8888777777777766665544332221 00   0     0 11333334


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +..++.........+..++++++-..++......+.+.++++++++|+++..++.|+.+.++|+.+.+
T Consensus        85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            44455556777888899999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.44  E-value=1.2e-05  Score=69.31  Aligned_cols=139  Identities=17%  Similarity=0.069  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC-----CcccchhhHHHHHHHHH
Q 024733            8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP-----MQTIRSRLQFLKISALS   82 (263)
Q Consensus         8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   82 (263)
                      ........-.++.....+..|...++++-+.......++...+.+.........+...     .... +.+.+...+..+
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~  221 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHHH
Confidence            3444455555666667777888765422121344455566555443332222221111     0111 223344444445


Q ss_pred             HHH-HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           83 FVF-CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        83 ~~~-~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      ++- .+.+.+.+.++++.+++.+..+..++|++..++++++++|+++..+++|..++++|+.+...
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            443 57888999999999999999999999999999999999999999999999999999977643

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.43  E-value=2.4e-06  Score=73.82  Aligned_cols=137  Identities=9%  Similarity=-0.075  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhh---------HHHHHH
Q 024733            9 TFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRL---------QFLKIS   79 (263)
Q Consensus         9 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~   79 (263)
                      ....+.....+.....+..|...++.+.+ |..++..+...+.+.+.+.....+..+.......+         .+...+
T Consensus       146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (302)
T TIGR00817       146 GFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL  224 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence            33444455555566667788887743466 88999999988887766655433211100000000         011111


Q ss_pred             HHHH-HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           80 ALSF-VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        80 ~~~~-~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      ..+. ++...+.+.+.+++++++..+++.....|+++.++++++++|+++..+++|..++++|+.+..
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            2222 222233466679999999999999999999999999999999999999999999999998764

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.42  E-value=1.9e-06  Score=73.64  Aligned_cols=70  Identities=14%  Similarity=0.139  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733           75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII  144 (263)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l  144 (263)
                      +......++...+.+.+.++++++.+++.......++|++..+++++++||+++..+++|..++++|+.+
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            3333444455567889999999999999999999999999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.39  E-value=8.6e-06  Score=70.15  Aligned_cols=128  Identities=13%  Similarity=0.056  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733           11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV   90 (263)
Q Consensus        11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (263)
                      .....-..++...++.+|..-++  .+ |....  . ..+...+.+.....+ .+....+ .+.+...+..++...+.+.
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~~--~~-~~~~~--~-~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~l~~~~~~t~~~~~  230 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYARG--KN-GITLF--F-ILTALALWIKYFLSP-QPAMVFS-LPAIIKLLLAAAAMGFGYA  230 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCC--CC-chhHH--H-HHHHHHHHHHHHHhc-CccccCC-HHHHHHHHHHHHHHHHHHH
Confidence            34444455566667778887655  33 55432  2 222222222122222 1111222 2334444455555567889


Q ss_pred             hhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           91 FGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        91 ~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +.++++++.+++.++.+..+.|++..++++++++|+++..+++|..+++.|+.+..
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            99999999999999999999999999999999999999999999999999987654

>TIGR00803 nst UDP-galactose transporter

Probab=98.20  E-value=2.9e-06  Score=69.99  Aligned_cols=156  Identities=13%  Similarity=0.049  Sum_probs=95.2

Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-------------------C--------c
Q 024733           99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-------------------P--------S  151 (263)
Q Consensus        99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-------------------~--------~  151 (263)
                      +++|.....++..|+++++.++...+||++..++++..+...|+......|                   .        .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            467888899999999999999999999999999999999999987532211                   0        1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHH
Q 024733          152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL  231 (263)
Q Consensus       152 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l  231 (263)
                      ..+.|....+.+..+.++..++.++..  ++++......+.....++.+.........+++..........++...+...
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~--k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKIL--KDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG  159 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcc--cCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence            236788888889999999999999987  443333333343333444333222222222222111111122333344444


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733          232 LFNSALAYFVNLTNFLVTKHTSALTLQVC  260 (263)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~s~~t~sv~  260 (263)
                      ..+++.+.+    ...++|..++++.+++
T Consensus       160 ~~~a~~~~~----v~~vlk~~~~~~~~~~  184 (222)
T TIGR00803       160 LLNVGGGLC----IGGVVRYADNTTKSFV  184 (222)
T ss_pred             HHHHhcCce----eeehhHHhHHHHHHHH
Confidence            444433333    3566777776655443

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.19  E-value=7.6e-05  Score=65.88  Aligned_cols=138  Identities=12%  Similarity=0.028  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc--------ccchhh
Q 024733            7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYG-----FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ--------TIRSRL   73 (263)
Q Consensus         7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~-----f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~   73 (263)
                      +.....+..-.+++....+..|...++.+     .+ +..+...+...+.+.+.++....+..+..        ..+.. 
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~-  270 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNY-  270 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhccccc-
Confidence            33445555556677777788888887542     44 55566666777776666544322211000        00000 


Q ss_pred             HHHHHHHHHHHHHHHHHhhh----hhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           74 QFLKISALSFVFCISVVFGN----VSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~----~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      .+.......+..++.+.+.|    .+++.+++..+++...+.|+++.++++++++|+++..+++|..++++|+.+.+
T Consensus       271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            11112222223344444555    69999999999999999999999999999999999999999999999997754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.10  E-value=9.1e-05  Score=63.81  Aligned_cols=69  Identities=13%  Similarity=0.013  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      ....++...+.+.+.+.++++.+++..+.+....|++..++++++++|+++..+++|..++++|+.+..
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            334455556889999999999999999999999999999999999999999999999999988887653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.95  E-value=0.0002  Score=61.57  Aligned_cols=129  Identities=9%  Similarity=0.041  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHH---HHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHH
Q 024733            7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMT---ACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSF   83 (263)
Q Consensus         7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (263)
                      .|.+.+...-.++-......+|..    +.+ |...++.|..   +++.+.... . ++  . ++...+..+ .....|+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~-~-~~--~-~~~~~~~~~-~~~~~Gi  219 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLG-H-IL--A-KPLKKYAIL-LNILPGL  219 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHH-H-hc--c-cchHHHHHH-HHHHHHH
Confidence            555555555555555666677754    255 7777656654   222222211 1 11  1 111223333 3444777


Q ss_pred             HHHHHHHhhhhhcc-ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhH----HHHhhhhhhheeee
Q 024733           84 VFCISVVFGNVSLR-FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTY----VTLIPVVTGVIIAS  146 (263)
Q Consensus        84 ~~~~~~~~~~~sl~-~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~----~~~~l~~~Gv~l~~  146 (263)
                      +....+.++..+.+ +.+++.+.++-+..|+...+.+++++||+.+++++    +|.++++.|+.+..
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            77888889999999 99999999999999999999999999999999999    99999999987754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.87  E-value=0.00078  Score=57.15  Aligned_cols=132  Identities=19%  Similarity=0.153  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHH-HHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733            8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTM-CHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC   86 (263)
Q Consensus         8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (263)
                      ........-.++.......+|.+. +  .+ +..... .++. ....... .......+ .. .....+......+++..
T Consensus       154 ~g~~~~l~a~~~~a~~~~~~~~~~-~--~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         154 LGLLLALAAALLWALYTALVKRLS-R--LG-PVTLALLLQLL-LALLLLL-LFFLSGFG-AP-ILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-C--CC-hHHHHHHHHHH-HHHHHHH-HHHhcccc-cc-CCHHHHHHHHHHHHHHH
Confidence            344444444455556666777776 3  33 555554 4544 2221111 11111111 11 23344555666666665


Q ss_pred             -HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           87 -ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        87 -~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                       ..+.+.+++++..+++..+.+..+.|++.+++++++++|+++..+++|..+++.|+.+...
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence             5889999999999999999999999999999999999999999999999999999877653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.83  E-value=7.8e-05  Score=55.97  Aligned_cols=72  Identities=14%  Similarity=0.053  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHH--HhhcccChhhHHHHhhhhhhheeeeccC
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL--MTLKREAWLTYVTLIPVVTGVIIASGGE  149 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~--~~~~~~~~~~~~~~~l~~~Gv~l~~~~~  149 (263)
                      ....-.++.+++.+.+.+++..+++.+.-+.+..+..+.+.++.  ++||++|..+++|+.++++|+.+...++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            33344566789999999999999999999999999889888885  8999999999999999999998876443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.79  E-value=0.00053  Score=56.40  Aligned_cols=127  Identities=10%  Similarity=0.014  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHHH
Q 024733           11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CISV   89 (263)
Q Consensus        11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   89 (263)
                      .+.+.-..++.++++..|.+-+.  -+ ...-+..-+..++++...+.....   .+.+.+..-...-+..+++. ++.+
T Consensus       151 ~~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~a---g~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         151 ALALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQA---GPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             HHHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhhc---chhhcChHHHHHHHHHHHHhcccch
Confidence            34445557777888888888753  22 233344666667666555443211   11111112233333344544 3788


Q ss_pred             HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhe
Q 024733           90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVI  143 (263)
Q Consensus        90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~  143 (263)
                      .++..++..+|...+.++.++.|.+.++.++++++|++|..||+++..++.+..
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999998887765

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.60  E-value=0.00065  Score=50.15  Aligned_cols=70  Identities=13%  Similarity=0.288  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      .....++++.++.+...+++++|.+.+--+ ....-+.+.+.+.++++|+++..+++++.++++|+..+..
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            445567778899999999999999998777 4688999999999999999999999999999999987754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.59  E-value=0.002  Score=56.18  Aligned_cols=142  Identities=11%  Similarity=0.082  Sum_probs=90.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchh-hHHHHHHHHHH
Q 024733            5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSR-LQFLKISALSF   83 (263)
Q Consensus         5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   83 (263)
                      ++.+.-+.+..-...-...++..|...++  .| +....+.=.+++.++..+.....++..-++.++. +..-..+..++
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~--~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKK--AP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccc--CC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence            34444444444445555556677888877  45 4444444444555444433332222222222221 11222222233


Q ss_pred             HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC
Q 024733           84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE  149 (263)
Q Consensus        84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~  149 (263)
                      +....+.+....++..++....+-..+..++.++++.+++|+++++..++|.+++++|..+....+
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            333444556778889999999999999999999999999999999999999999999999987654

Some of the sequences in this family are annotated as putative membrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.52  E-value=0.0046  Score=53.31  Aligned_cols=64  Identities=20%  Similarity=0.336  Sum_probs=58.8

Q ss_pred             HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      +.+.++..+...|+.+.|.+..+-+.+..-++.++++..++|||++++.+.|..+++.|..++.
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            4556777888899999999999999999999999999999999999999999999999997754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.47  E-value=0.021  Score=48.22  Aligned_cols=128  Identities=15%  Similarity=0.072  Sum_probs=96.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHh-hhHHHHHHHHHHHHhhcccChhhHH----HHhhhhhhheeeec
Q 024733           73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYV----TLIPVVTGVIIASG  147 (263)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~-~~~pi~~~i~~~~~~~~~~~~~~~~----~~~l~~~Gv~l~~~  147 (263)
                      +.+...+..|++.+++....+.|.++..+|.+--+. ..+-+.+.+++.++++|-.+..+++    +++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            445556677888899999999999999888776664 5566778899999999976666544    88899999999887


Q ss_pred             cCCc--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733          148 GEPS--------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT  206 (263)
Q Consensus       148 ~~~~--------~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~  206 (263)
                      .|.+        ....|+...+++.+.|..|.+..|.      .+.|+++...=++..-.+.-+.+.
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~------~~~~~~~~~lPqaiGm~i~a~i~~  183 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA------FHVSGWSAFLPQAIGMLIGAFIFN  183 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh------cCCChhHhHHHHHHHHHHHHHHHh
Confidence            6532        1257999999999999999988766      357888877766554444444444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.43  E-value=0.0015  Score=47.57  Aligned_cols=69  Identities=12%  Similarity=0.261  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      ...-+++..++.+...+++.+|.+.+--+ ....-+.+.+.+++++||+++..+++++.++++|+.....
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34456677888888899999999998777 4477888999999999999999999999999999988754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.42  E-value=0.0042  Score=53.71  Aligned_cols=138  Identities=12%  Similarity=0.062  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH--Hhh-cCCccc--chhhHHHHHHHHHH
Q 024733            9 TFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW--MKM-VPMQTI--RSRLQFLKISALSF   83 (263)
Q Consensus         9 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~--~~~-~~~~~~--~~~~~~~~~~~~~~   83 (263)
                      .+..+..+.++.......+|.++++++.+ |....+..-.++.+...+....  .+. .+..+.  ...+.+...+..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            55666777888888888999999987777 7777777777776655544433  111 111100  11234455555566


Q ss_pred             HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      .......+.+.-.+..++-..+++..+.-+.+.+++.++++++++..+|.|+.+++.|..+-..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            6666666667778889999999999999999999999999999999999999999999877543

; GO: 0055085 transmembrane transport

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.0014  Score=46.96  Aligned_cols=70  Identities=14%  Similarity=0.089  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHH-HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQ-AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~-vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      .+..-+++..++.+...|++++|.+.+- +-...-...+.+.++++++|+.+..+++++.++++|+.....
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            4445667788899999999999999864 446677889999999999999999999999999999987643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.37  E-value=0.0025  Score=45.95  Aligned_cols=69  Identities=16%  Similarity=0.122  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      .+...+++..++.+...+++.+|.+.+--+ -..-.+.+.+.+++++||++++.+++++.++++|+....
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344566778888888999999999987555 557789999999999999999999999999999998764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.31  E-value=0.0047  Score=44.80  Aligned_cols=68  Identities=10%  Similarity=0.058  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA  145 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~  145 (263)
                      .....+++..++.+...+++.+|.+.+--+ -....+.+.+.+.+++||+++..+++++.++++|+...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444566677888889999999999987555 55778899999999999999999999999999999765

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.97  E-value=0.0083  Score=42.29  Aligned_cols=58  Identities=12%  Similarity=0.081  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHhhhhhccccchhHHHH-HhhhHHHHHHHHHHHHhhcccChhhHHHHhhh
Q 024733           81 LSFVFCISVVFGNVSLRFLPVSFNQA-VGATTPFFTAVFAYLMTLKREAWLTYVTLIPV  138 (263)
Q Consensus        81 ~~~~~~~~~~~~~~sl~~~~~~~~~v-i~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~  138 (263)
                      ...++..++.+...+++++|.+.+-- ......+.+.+.+.+++||+.|..+++++.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34477888899999999999999844 56689999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.93  E-value=0.035  Score=46.89  Aligned_cols=111  Identities=11%  Similarity=0.009  Sum_probs=81.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 024733           36 FRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFF  114 (263)
Q Consensus        36 f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~  114 (263)
                      .| +.+-.++....-......+..+....++ -.......+..+...|...++...++..|-+.+|.++..++.+..|..
T Consensus       172 v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl  250 (293)
T COG2962         172 VD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTL  250 (293)
T ss_pred             Cc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            44 5555556665555554444443322221 000123445666677888999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733          115 TAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus       115 ~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      ..+++.++++|+++..++.+-..+-+|+.+.+.
T Consensus       251 ~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         251 MFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998888777766643

>TIGR00803 nst UDP-galactose transporter

Probab=96.84  E-value=0.026  Score=46.34  Aligned_cols=65  Identities=9%  Similarity=0.020  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733           80 ALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII  144 (263)
Q Consensus        80 ~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l  144 (263)
                      ...+..+....+..+.+++.+.....+...+.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33455667777899999999999999999999999999999999999999999999999998865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.75  E-value=0.078  Score=40.26  Aligned_cols=116  Identities=12%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             HHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHH
Q 024733           25 LLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFN  104 (263)
Q Consensus        25 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~  104 (263)
                      ..|-.+-+..+  .|..-+++-+..+.+.+.++....+..+.+.. ++.+|+.+. .|++-.....+...+...+.++..
T Consensus        18 ~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~-~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~   93 (138)
T PF04657_consen   18 AFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASL-SSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALT   93 (138)
T ss_pred             HHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHH
Confidence            45555555533  38888899999998877766555443322222 233455444 678888888888999999888777


Q ss_pred             HHH-hhhHHHHHHHHHHH----HhhcccChhhHHHHhhhhhhhee
Q 024733          105 QAV-GATTPFFTAVFAYL----MTLKREAWLTYVTLIPVVTGVII  144 (263)
Q Consensus       105 ~vi-~~~~pi~~~i~~~~----~~~~~~~~~~~~~~~l~~~Gv~l  144 (263)
                      ..+ ..-+-+..+++|.+    .-|++.+++|++++.+.++|+.+
T Consensus        94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            766 45567778888885    34678999999999999999853

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.59  E-value=0.46  Score=41.74  Aligned_cols=162  Identities=13%  Similarity=0.105  Sum_probs=103.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHH---hhcCCcccchhhHHHHHHHHH
Q 024733            6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWM---KMVPMQTIRSRLQFLKISALS   82 (263)
Q Consensus         6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   82 (263)
                      ....+..+..=.+++.+...-.|. .++.+++ -...  ...++++++.....-..   ...+.-+..+...+...+..|
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE-~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKWSWE-TMWS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCCchh-HHHH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            445566677777888888888888 5543333 2222  33334444333111111   111100101223445555667


Q ss_pred             HHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhccc-------ChhhHHHHhhhhhhheeeec----cCC
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKRE-------AWLTYVTLIPVVTGVIIASG----GEP  150 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~-------~~~~~~~~~l~~~Gv~l~~~----~~~  150 (263)
                      ++.+.+......+.++..++...-+ ..++-+...++..++++|=.       .....++++++++|+++...    .|.
T Consensus        81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~  160 (345)
T PRK13499         81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER  160 (345)
T ss_pred             HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence            8888888899999999998887766 55667778888888887532       23467888899999999876    432


Q ss_pred             --------cc-hHHHHHHHHHHHHHHHHHH
Q 024733          151 --------SF-HLFGFLMCIAATAARALKS  171 (263)
Q Consensus       151 --------~~-~~~G~~~~l~a~~~~a~~~  171 (263)
                              +. ..+|+.+++++.+.++.|.
T Consensus       161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        161 KMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             ccccccccccchHhHHHHHHHHHHHHHHHH
Confidence                    12 2589999999999999998

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.24  E-value=0.014  Score=42.56  Aligned_cols=70  Identities=16%  Similarity=0.125  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733           75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA  145 (263)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~  145 (263)
                      ++..+|.. .+-.+...+++.+...+.|.+.-+ +++.=++|++.++++.+|..++++++|+.++++|+.+.
T Consensus        42 ~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            44455433 344455566777888888888877 69999999999999999999999999999999999764

Many members are annotated as potential transmembrane proteins.

>COG2510 Predicted membrane protein [Function unknown]

Probab=96.21  E-value=0.088  Score=39.02  Aligned_cols=87  Identities=15%  Similarity=0.149  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHH
Q 024733          157 FLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSA  236 (263)
Q Consensus       157 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  236 (263)
                      .++++++++++++..+..|--.    ++.||...+..-+.....++....+....++..     ...+...+.+++++|+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSGl   75 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSGL   75 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHHH
Confidence            6789999999999999999977    578888888888888888888877554433321     1345567788888998


Q ss_pred             HHHHHHHHHHHHHhcc
Q 024733          237 LAYFVNLTNFLVTKHT  252 (263)
Q Consensus       237 ~~~~~~~~~~~~~~~~  252 (263)
                      .+-......|..+++=
T Consensus        76 a~glswl~Yf~ALk~G   91 (140)
T COG2510          76 AGGLSWLLYFRALKKG   91 (140)
T ss_pred             HHHHHHHHHHHHHhcC
Confidence            8888888888887753

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.21  E-value=0.093  Score=44.31  Aligned_cols=127  Identities=9%  Similarity=-0.011  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733            7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC   86 (263)
Q Consensus         7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (263)
                      .|.+...+.-.+.-..+....|..    +.+ |.....=|.+ +.++.-++.....   +++..+|+.++ -...|+.++
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~~----~~~-~~~~~lPqai-Gm~i~a~i~~~~~---~~~~~~k~~~~-nil~G~~w~  206 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKAF----HVS-GWSAFLPQAI-GMLIGAFIFNLFS---KKPFFEKKSWK-NILTGLIWG  206 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc----CCC-hhHhHHHHHH-HHHHHHHHHhhcc---cccccccchHH-hhHHHHHHH
Confidence            344444444444444555555652    244 6655555533 3222222222211   11112334444 456789999


Q ss_pred             HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHH----HHhhhhhhhe
Q 024733           87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYV----TLIPVVTGVI  143 (263)
Q Consensus        87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~----~~~l~~~Gv~  143 (263)
                      .+..+...|.+.+.++.+-.+..+.++...+.+.+++||+-+++++.    +++++++|..
T Consensus       207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999998888664    4444444543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.08  E-value=0.042  Score=47.04  Aligned_cols=66  Identities=15%  Similarity=0.213  Sum_probs=60.7

Q ss_pred             HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733           82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~  147 (263)
                      -+.+.++-..++.|+.+.|.+..+-+.++..+..++++..++|||.+....+|..++++|..+++.
T Consensus        71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            345568888999999999999999999999999999999999999999999999999999988764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.89  E-value=0.018  Score=49.77  Aligned_cols=141  Identities=13%  Similarity=0.066  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCCchHHHHHHHHHHHHHHHH-HHHHHHhhcCC---cccchhhHHHHH
Q 024733            5 SKLFTFGLVAAWYSSNIGVLLLNKYLLS--NYGFRYPIFLTMCHMTACSLLSY-IAIAWMKMVPM---QTIRSRLQFLKI   78 (263)
Q Consensus         5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~--~~~f~~p~~l~~~r~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~   78 (263)
                      -.+.....++.+......=.+..|.++.  +++.+ +..+...+.-++...+. ++....+....   ...++.-.....
T Consensus       160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~  238 (316)
T KOG1441|consen  160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL  238 (316)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH
Confidence            4566677777888888888888888884  55677 77777777666665555 43322111111   100111112222


Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      ...+.+....+...+..+..+++=+.++.....=+.+.+.++++++|+.|..+..|..+.++|+.+..
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            22334444455667778889999999999999989999999999999999999999999999998764

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.33  E-value=0.77  Score=35.22  Aligned_cols=118  Identities=12%  Similarity=0.062  Sum_probs=77.3

Q ss_pred             HHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhH-
Q 024733           25 LLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSF-  103 (263)
Q Consensus        25 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~-  103 (263)
                      -.|-.+-+.  .+.|..-.+.-+..+.+.+.++...+++++......+..|+.+.. |.+.+...+.+......+.++. 
T Consensus        22 ~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~G-G~lGa~~vt~s~~l~p~lGa~~t   98 (150)
T COG3238          22 AINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIG-GLLGAIFVTSSILLAPRLGAATT   98 (150)
T ss_pred             HHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHc-cchhhhhhhhhHHhccchhHHHH
Confidence            455566655  445888888889888777766655544444333223445555543 5655666666666666655444 


Q ss_pred             HHHHhhhHHHHHHHHHHHHh----hcccChhhHHHHhhhhhhheee
Q 024733          104 NQAVGATTPFFTAVFAYLMT----LKREAWLTYVTLIPVVTGVIIA  145 (263)
Q Consensus       104 ~~vi~~~~pi~~~i~~~~~~----~~~~~~~~~~~~~l~~~Gv~l~  145 (263)
                      ..+..+-+-+..+++|.+=.    +++++..+++++++..+|+.+.
T Consensus        99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            44556777788888886543    3679999999999999996554

>TIGR00688 rarD rarD protein

Probab=95.22  E-value=0.57  Score=39.19  Aligned_cols=49  Identities=8%  Similarity=0.105  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHH
Q 024733           74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLM  122 (263)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~  122 (263)
                      +|...+..+++..+.+.+.++++++.+++..+...++.|++..+++.+.
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            4555666677767889999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=94.84  E-value=0.039  Score=40.28  Aligned_cols=84  Identities=25%  Similarity=0.289  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHH-HHHHHH
Q 024733          165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL-AYFVNL  243 (263)
Q Consensus       165 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~  243 (263)
                      ++||.+.+..|+..    ++.|+...+.+....+.+ +++.....+.++..      +.+...+......+.+ ....+.
T Consensus         1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~   69 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKPFK------NLSPRQWLWLLFLGLLGTALAYL   69 (126)
T ss_pred             ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc------CCChhhhhhhhHhhccceehHHH
Confidence            36788999999988    459999999999999998 77766555544311      1222222333333333 355555


Q ss_pred             HHHHHHhccCceeEEe
Q 024733          244 TNFLVTKHTSALTLQV  259 (263)
Q Consensus       244 ~~~~~~~~~s~~t~sv  259 (263)
                      ..+...++.++...+.
T Consensus        70 ~~~~a~~~~~~~~~~~   85 (126)
T PF00892_consen   70 LYFYALKYISASIVSI   85 (126)
T ss_pred             HHHHHHHhcchhHHHH
Confidence            5667777777665543

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=93.75  E-value=2.5  Score=35.31  Aligned_cols=129  Identities=11%  Similarity=0.004  Sum_probs=85.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhcCCcccc--hhhHHHHHHHHH
Q 024733            6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW-MKMVPMQTIR--SRLQFLKISALS   82 (263)
Q Consensus         6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~   82 (263)
                      ....+..++.-.++|....++++.++++.+  .|...--.|+-+.+++..++... .+..+.++..  ..-.+. .....
T Consensus       112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~-~~~~i  188 (244)
T PF04142_consen  112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWW-VWIVI  188 (244)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchH-HHHHH
Confidence            345566677777888888889999998855  36666667776665554444332 2221111111  111112 22233


Q ss_pred             HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhh
Q 024733           83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIP  137 (263)
Q Consensus        83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l  137 (263)
                      +..+.+-.....-++|.+.=.=....+...+.+.++++.+++.+++..-.+|..+
T Consensus       189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            4456666666778889888788888899999999999999999999988877654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.44  E-value=1.6  Score=37.37  Aligned_cols=139  Identities=8%  Similarity=0.041  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hcCCccc--chhhHHHHHHHH
Q 024733            5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMK-MVPMQTI--RSRLQFLKISAL   81 (263)
Q Consensus         5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~   81 (263)
                      .....++.+..+.+...-.+-..+.+++.++.. +..+.+.-=++..+.-.......+ ..+....  ..++.++..+..
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            355667778888898998888899999876665 444333222222222221111111 0110000  124667888888


Q ss_pred             HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733           82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII  144 (263)
Q Consensus        82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l  144 (263)
                      +.+.+.+..+.++-++.-.+=..+.+.-+.=++...++.+.++.+.+..+|.+..+++.|+..
T Consensus       248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            999988877777666665556677778888899999999999999999999999988877643

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=92.71  E-value=0.095  Score=43.85  Aligned_cols=70  Identities=13%  Similarity=0.055  Sum_probs=59.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhh
Q 024733           72 RLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTG  141 (263)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~G  141 (263)
                      +++|..+.-+|++..++..+...++|.=-++-.++.+++..++..+.+.+++++-||..+|+|+++++..
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS  319 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS  319 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence            4455556667887777888888899999999999999999999999999999999999999988765433

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.46  E-value=3.8  Score=36.07  Aligned_cols=68  Identities=4%  Similarity=0.076  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHHhhhhhccccchhHHHH---Hh-hhHHHHHHHHHHHHhhcccC------hhhHHHHhhhhhhheeeec
Q 024733           79 SALSFVFCISVVFGNVSLRFLPVSFNQA---VG-ATTPFFTAVFAYLMTLKREA------WLTYVTLIPVVTGVIIASG  147 (263)
Q Consensus        79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~v---i~-~~~pi~~~i~~~~~~~~~~~------~~~~~~~~l~~~Gv~l~~~  147 (263)
                      ...|+.......++..|-...+.....+   +. ++..++..+.+. ++||+=+      +..++++++.++|..+...
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            4456666777777777666664443333   55 666677777777 5888655      4456777777777766543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=92.37  E-value=1.2  Score=39.26  Aligned_cols=128  Identities=13%  Similarity=0.052  Sum_probs=86.9

Q ss_pred             HHHHHHHHHhhhC--CCCchHHHHHHHHHHHHHHHHHHHHHH--hhcCCcccchhhHHHHHHHHHHH-HHHHHHhhhhhc
Q 024733           22 GVLLLNKYLLSNY--GFRYPIFLTMCHMTACSLLSYIAIAWM--KMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSL   96 (263)
Q Consensus        22 ~~~~~nK~~l~~~--~f~~p~~l~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl   96 (263)
                      .+...-|.=.+++  +.+-|....++.. ++.++++......  -+.++-+.|+..+.-.++..++. ..++=.+..+|.
T Consensus       261 vY~vllk~~~~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~  339 (416)
T KOG2765|consen  261 VYTVLLKRKIGDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV  339 (416)
T ss_pred             HHHHHHHhhcccccccccHHHHHHHHHH-HHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH
Confidence            4445556665554  4665555554442 3444444222211  12344444554444444444433 346667888899


Q ss_pred             cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC
Q 024733           97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP  150 (263)
Q Consensus        97 ~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~  150 (263)
                      -.+++-.+++-.+.+.+..++.+.++.++++|+..++|...+++|-.++...+.
T Consensus       340 ~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  340 LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            999999999999999999999999999999999999999999999988876553

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.50  E-value=3.8  Score=33.64  Aligned_cols=122  Identities=9%  Similarity=0.007  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhcCC---cccchhhHHHHHHHHHHHHHHHHHhh
Q 024733           17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWM-KMVPM---QTIRSRLQFLKISALSFVFCISVVFG   92 (263)
Q Consensus        17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (263)
                      .+.+...++..|...+--+|. -..-.+..=+.+..++..+.... ++.+.   +.. +.+.....++-|++-.+...+.
T Consensus       164 clssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl-~~d~l~am~ISgl~svgiSy~s  241 (309)
T COG5070         164 CLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL-SVDSLMAMFISGLCSVGISYCS  241 (309)
T ss_pred             hHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC-ChHHHHHHHHHHHHHhhhhhcc
Confidence            355666667777766643344 44444555555544444333332 22221   111 2233444555566666777889


Q ss_pred             hhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhh
Q 024733           93 NVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVT  140 (263)
Q Consensus        93 ~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~  140 (263)
                      -|.++-++...+.+..++.-...++.+.++++|+.++.++.+++++..
T Consensus       242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999888888776543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=89.97  E-value=3.1  Score=31.49  Aligned_cols=91  Identities=22%  Similarity=0.314  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCC-CHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733          157 FLMCIAATAARALKSVLQGILLSSEGEKL-NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS  235 (263)
Q Consensus       157 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  235 (263)
                      .++++.+...-+.+..++.++.    ++. ||+.-.......+.+.+..+....++++..   ...+.+   ++ ..++|
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~---~~~~~p---~w-~~lGG   71 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSLA---SLSSVP---WW-AYLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc---hhccCC---hH-HhccH
Confidence            5678888899999998888887    345 499999999999999988887665544211   111111   12 33388


Q ss_pred             HHHHHHHHHHHHHHhccCceeEE
Q 024733          236 ALAYFVNLTNFLVTKHTSALTLQ  258 (263)
Q Consensus       236 ~~~~~~~~~~~~~~~~~s~~t~s  258 (263)
                      +++..+..+....+++.++....
T Consensus        72 ~lG~~~V~~~~~~vp~lG~~~~~   94 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRLGAALTT   94 (138)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHH
Confidence            88888888888888988876543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.84  E-value=2.3  Score=36.65  Aligned_cols=135  Identities=14%  Similarity=0.049  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC-----CcccchhhHHHHHHHHHHH
Q 024733           10 FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP-----MQTIRSRLQFLKISALSFV   84 (263)
Q Consensus        10 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   84 (263)
                      ..+.....+.........|+-.+..+++ -+.+.+..-++....+.+.....+..+     .+.... ......+..+..
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~-~~~~~~~~lScv  236 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD-SSVLVVMLLSCV  236 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc-hhHHHHHHHHHH
Confidence            4455566667777777788877754444 344444555555444444333332111     000011 112223333443


Q ss_pred             HH-HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733           85 FC-ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS  146 (263)
Q Consensus        85 ~~-~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~  146 (263)
                      .+ +-..+..+..+..|+...++.....-..+.+.+.++++++.++...+|+.+.+.|-.+..
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            33 444667777778888887777755566666666666677788888888877777766654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.98  E-value=1.4  Score=36.34  Aligned_cols=71  Identities=15%  Similarity=0.184  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733           74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII  144 (263)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l  144 (263)
                      .++.+...++..+++.++.+.-..+-++-.-+++..+.-+|+.+.+.++++..++.++|++..+++.|...
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            45566677888888888887777776666667777788899999999999999999999999999887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.44
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.3

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.44  E-value=4.7e-07  Score=65.17  Aligned_cols=72  Identities=13%  Similarity=0.227  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE  149 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~  149 (263)
                      .+...+++..++.+...++++.|.+.+..+ ..+.|+++++++++++||++++.+++++.++++|+.+....+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344456678888999999999999999888 899999999999999999999999999999999998876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.30  E-value=4.3e-07  Score=67.81  Aligned_cols=71  Identities=13%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc
Q 024733           78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG  148 (263)
Q Consensus        78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~  148 (263)
                      .+...+++.+++.+.+.++++.+++.+..+ ..+.|++++++++++++|+++..+++|+.++++|+.+....
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344556778899999999999999998888 89999999999999999999999999999999999887543

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00