Citrus Sinensis ID: 024774

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
MNRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
cccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccEEEEccEEccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEcccccccccEEEcccccccccccccEEcHHHHccccccccccccccccccccccccccEEEEcccHHHHHHHHHcccccccHHHHHHHHHcccccccccccHHHHccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccc
mnrdydaegerqegvENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNdvvdesdpdldepqIEHLLQTAEAIrkdypdedwlHLTGLIHDLGkvlnlpsfgglpqwavvgdtfpvgcafdesivhhkyfkenpdysnpafnteygvysegcgldnvmmswgHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETfskydlyskskvridvekVKPYYLSLIEKYFPAKLKW
mnrdydaegerqegvenfyrinhiNQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSkydlyskskvridvekvkpyYLSLiekyfpaklkw
MNRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
**************VENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD**********IEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPA****
MNRDYD*EGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
***********QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
**R*YDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLKW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query262 2.2.26 [Sep-21-2011]
Q8L799311 Inositol oxygenase 1 OS=A yes no 0.992 0.836 0.85 1e-134
Q5Z8T3308 Probable inositol oxygena yes no 0.992 0.844 0.807 1e-126
Q8H1S0317 Inositol oxygenase 4 OS=A no no 0.992 0.820 0.8 1e-126
O82200317 Inositol oxygenase 2 OS=A no no 0.992 0.820 0.796 1e-124
Q9FJU4314 Inositol oxygenase 5 OS=A no no 0.992 0.828 0.773 1e-122
Q54GH4292 Inositol oxygenase OS=Dic yes no 0.980 0.880 0.536 1e-78
Q4V8T0278 Inositol oxygenase OS=Dan yes no 0.958 0.902 0.509 9e-71
Q9QXN5285 Inositol oxygenase OS=Mus yes no 0.977 0.898 0.486 3e-70
A7MBE4285 Inositol oxygenase OS=Bos yes no 0.977 0.898 0.490 2e-69
Q5REY9285 Inositol oxygenase OS=Pon yes no 0.977 0.898 0.486 3e-69
>sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1 Back     alignment and function desciption
 Score =  477 bits (1227), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 221/260 (85%), Positives = 241/260 (92%)

Query: 3   RDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDES 62
           RDYDAE ER+ GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DES
Sbjct: 52  RDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDES 111

Query: 63  DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTF 122
           DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL   SFG LPQWAVVGDTF
Sbjct: 112 DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTF 171

Query: 123 PVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKEN 182
           PVGCAFDESIVHHKYFKENPDY NP++N++YG+Y+EGCGLDNV+MSWGHDDYMYLVAKEN
Sbjct: 172 PVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKEN 231

Query: 183 KTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVE 242
           +TTLPSA LFIIRYHSFYALHKSEAYKHLMN ED EN+KWL+ F+KYDLYSKSKVR++VE
Sbjct: 232 QTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVE 291

Query: 243 KVKPYYLSLIEKYFPAKLKW 262
           +VKPYYLSL  KYFP+KLKW
Sbjct: 292 EVKPYYLSLTNKYFPSKLKW 311
Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 9EC: 9EC: .EC: 1
>sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica GN=Os06g0561000 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1 Back     alignment and function description
>sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2 Back     alignment and function description
>sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1 Back     alignment and function description
>sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1 Back     alignment and function description
>sp|Q4V8T0|MIOX_DANRE Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1 Back     alignment and function description
>sp|Q9QXN5|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2 Back     alignment and function description
>sp|A7MBE4|MIOX_BOVIN Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1 Back     alignment and function description
>sp|Q5REY9|MIOX_PONAB Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
225442398304 PREDICTED: inositol oxygenase 1 [Vitis v 0.992 0.855 0.892 1e-138
388522589305 unknown [Medicago truncatula] 0.992 0.852 0.888 1e-137
388493838305 unknown [Lotus japonicus] 0.992 0.852 0.888 1e-135
356522820306 PREDICTED: inositol oxygenase 1-like [Gl 1.0 0.856 0.882 1e-135
255635830335 unknown [Glycine max] 1.0 0.782 0.878 1e-135
356526059306 PREDICTED: inositol oxygenase 1-like [Gl 1.0 0.856 0.878 1e-135
224099667283 predicted protein [Populus trichocarpa] 0.992 0.918 0.873 1e-134
225445025309 PREDICTED: probable inositol oxygenase [ 0.992 0.841 0.873 1e-133
30683840311 inositol oxygenase 1 [Arabidopsis thalia 0.992 0.836 0.85 1e-132
238478480309 inositol oxygenase 1 [Arabidopsis thalia 0.992 0.841 0.85 1e-132
>gi|225442398|ref|XP_002282395.1| PREDICTED: inositol oxygenase 1 [Vitis vinifera] gi|297743146|emb|CBI36013.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/260 (89%), Positives = 251/260 (96%)

Query: 3   RDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDES 62
           RDYDAE +R++GVENFYRINHINQTYDFVKKMREEY +LNRV+MSIWECCELLNDVVDES
Sbjct: 45  RDYDAESDRKDGVENFYRINHINQTYDFVKKMREEYSRLNRVQMSIWECCELLNDVVDES 104

Query: 63  DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTF 122
           DPDLDEPQIEHLLQTAEAIRKDYP+EDW+HLT LIHDLGKVL LPSFG LPQWAVVGDTF
Sbjct: 105 DPDLDEPQIEHLLQTAEAIRKDYPNEDWMHLTALIHDLGKVLLLPSFGELPQWAVVGDTF 164

Query: 123 PVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKEN 182
           PVGCAFDESIVHHK+FKE+PDY NPA+NT+YGVYSEGCGL+NVMMSWGHDDYMYLVAKEN
Sbjct: 165 PVGCAFDESIVHHKHFKESPDYYNPAYNTKYGVYSEGCGLENVMMSWGHDDYMYLVAKEN 224

Query: 183 KTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVE 242
           KTTLPSA LF+IRYHSFYALH+S+AYK+LMNEED+ENLKWL+ F+KYDLYSKSKVRIDVE
Sbjct: 225 KTTLPSAGLFVIRYHSFYALHRSDAYKYLMNEEDIENLKWLKIFNKYDLYSKSKVRIDVE 284

Query: 243 KVKPYYLSLIEKYFPAKLKW 262
           KVKPYYLSLIEKYFPAKL W
Sbjct: 285 KVKPYYLSLIEKYFPAKLNW 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|388522589|gb|AFK49356.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388493838|gb|AFK34985.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356522820|ref|XP_003530041.1| PREDICTED: inositol oxygenase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|255635830|gb|ACU18263.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356526059|ref|XP_003531637.1| PREDICTED: inositol oxygenase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224099667|ref|XP_002311571.1| predicted protein [Populus trichocarpa] gi|222851391|gb|EEE88938.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445025|ref|XP_002283119.1| PREDICTED: probable inositol oxygenase [Vitis vinifera] gi|297738724|emb|CBI27969.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30683840|ref|NP_172904.2| inositol oxygenase 1 [Arabidopsis thaliana] gi|75154124|sp|Q8L799.1|MIOX1_ARATH RecName: Full=Inositol oxygenase 1; AltName: Full=Myo-inositol oxygenase 1; Short=AtMIOX1; Short=MI oxygenase 1 gi|22531100|gb|AAM97054.1| unknown protein [Arabidopsis thaliana] gi|23197958|gb|AAN15506.1| unknown protein [Arabidopsis thaliana] gi|51968372|dbj|BAD42878.1| unknown protein [Arabidopsis thaliana] gi|51971577|dbj|BAD44453.1| unknown protein [Arabidopsis thaliana] gi|332191053|gb|AEE29174.1| inositol oxygenase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|238478480|ref|NP_001154337.1| inositol oxygenase 1 [Arabidopsis thaliana] gi|332191054|gb|AEE29175.1| inositol oxygenase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
TAIR|locus:2012572311 MIOX1 "myo-inositol oxygenase 0.992 0.836 0.85 6.8e-127
TAIR|locus:2052015317 MIOX2 "myo-inositol oxygenase 0.992 0.820 0.796 7.7e-119
TAIR|locus:2165061314 MIOX5 "myo-inositol oxygenase 0.992 0.828 0.773 1.5e-115
DICTYBASE|DDB_G0290161292 miox "inositol oxygenase" [Dic 0.980 0.880 0.536 1.6e-77
FB|FBgn0036262292 CG6910 [Drosophila melanogaste 0.980 0.880 0.539 6.5e-74
ZFIN|ZDB-GENE-050913-113283 miox "myo-inositol oxygenase" 0.977 0.904 0.501 1.6e-70
ASPGD|ASPL0000003632312 AN5985 [Emericella nidulans (t 0.965 0.810 0.534 2.6e-70
MGI|MGI:1891725285 Miox "myo-inositol oxygenase" 0.977 0.898 0.486 5.6e-68
UNIPROTKB|F1RYH8282 MIOX "Inositol oxygenase" [Sus 0.977 0.907 0.490 3.1e-67
UNIPROTKB|G4N272317 MGG_09462 "Inositol oxygenase 0.965 0.798 0.513 4e-67
TAIR|locus:2012572 MIOX1 "myo-inositol oxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
 Identities = 221/260 (85%), Positives = 241/260 (92%)

Query:     3 RDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDES 62
             RDYDAE ER+ GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DES
Sbjct:    52 RDYDAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDES 111

Query:    63 DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTF 122
             DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL   SFG LPQWAVVGDTF
Sbjct:   112 DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGDTF 171

Query:   123 PVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKEN 182
             PVGCAFDESIVHHKYFKENPDY NP++N++YG+Y+EGCGLDNV+MSWGHDDYMYLVAKEN
Sbjct:   172 PVGCAFDESIVHHKYFKENPDYDNPSYNSKYGIYTEGCGLDNVLMSWGHDDYMYLVAKEN 231

Query:   183 KTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVE 242
             +TTLPSA LFIIRYHSFYALHKSEAYKHLMN ED EN+KWL+ F+KYDLYSKSKVR++VE
Sbjct:   232 QTTLPSAGLFIIRYHSFYALHKSEAYKHLMNNEDRENMKWLKVFNKYDLYSKSKVRVNVE 291

Query:   243 KVKPYYLSLIEKYFPAKLKW 262
             +VKPYYLSL  KYFP+KLKW
Sbjct:   292 EVKPYYLSLTNKYFPSKLKW 311
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0016491 "oxidoreductase activity" evidence=ISS
GO:0019310 "inositol catabolic process" evidence=IEA
GO:0050113 "inositol oxygenase activity" evidence=IEA;IMP
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006949 "syncytium formation" evidence=IGI
TAIR|locus:2052015 MIOX2 "myo-inositol oxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165061 MIOX5 "myo-inositol oxygenase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290161 miox "inositol oxygenase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0036262 CG6910 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-113 miox "myo-inositol oxygenase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ASPGD|ASPL0000003632 AN5985 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
MGI|MGI:1891725 Miox "myo-inositol oxygenase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1RYH8 MIOX "Inositol oxygenase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G4N272 MGG_09462 "Inositol oxygenase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9QXN5MIOX_MOUSE1, ., 1, 3, ., 9, 9, ., 10.48650.97700.8982yesno
Q9UGB7MIOX_HUMAN1, ., 1, 3, ., 9, 9, ., 10.48650.97700.8982yesno
Q4V8T0MIOX_DANRE1, ., 1, 3, ., 9, 9, ., 10.50980.95800.9028yesno
Q8L799MIOX1_ARATH1, ., 1, 3, ., 9, 9, ., 10.850.99230.8360yesno
Q9QXN4MIOX_RAT1, ., 1, 3, ., 9, 9, ., 10.47120.97700.8982yesno
Q5Z8T3MIOX_ORYSJ1, ., 1, 3, ., 9, 9, ., 10.80760.99230.8441yesno
Q9FJU4MIOX5_ARATH1, ., 1, 3, ., 9, 9, ., 10.77390.99230.8280nono
A7MBE4MIOX_BOVIN1, ., 1, 3, ., 9, 9, ., 10.49040.97700.8982yesno
Q8H1S0MIOX4_ARATH1, ., 1, 3, ., 9, 9, ., 10.80.99230.8201nono
Q8WN98MIOX_PIG1, ., 1, 3, ., 9, 9, ., 10.48650.97700.9078yesno
Q54GH4MIOX_DICDI1, ., 1, 3, ., 9, 9, ., 10.53610.98090.8801yesno
O82200MIOX2_ARATH1, ., 1, 3, ., 9, 9, ., 10.79690.99230.8201nono
Q5REY9MIOX_PONAB1, ., 1, 3, ., 9, 9, ., 10.48650.97700.8982yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.990.983
3rd Layer1.13.99.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
pfam05153255 pfam05153, DUF706, Family of unknown function (DUF 1e-168
>gnl|CDD|191210 pfam05153, DUF706, Family of unknown function (DUF706) Back     alignment and domain information 
 Score =  465 bits (1198), Expect = e-168
 Identities = 167/257 (64%), Positives = 194/257 (75%), Gaps = 2/257 (0%)

Query: 6   DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 65
             E    + V  FYR  H  QT DFVKK R E+ K  R +M+IWE  ELLN +VDESDPD
Sbjct: 1   YEEAPLCDRVREFYREQHTKQTVDFVKKARAEFLKFTRAKMTIWEALELLNTLVDESDPD 60

Query: 66  LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVG 125
            D PQI+HLLQTAEAIR+D+PD DW+HLTGLIHDLGKVL    FGG PQWAVVGDTFPVG
Sbjct: 61  TDLPQIQHLLQTAEAIRRDHPDPDWMHLTGLIHDLGKVLAF--FGGEPQWAVVGDTFPVG 118

Query: 126 CAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTT 185
           CAF ESIV+ + FK NPDY NP +NT+YG+Y   CGLDNVMMSWGHD+Y+Y V K NK+T
Sbjct: 119 CAFSESIVYPESFKGNPDYDNPKYNTKYGIYQPNCGLDNVMMSWGHDEYLYQVLKHNKST 178

Query: 186 LPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVK 245
           LP  AL++IRYHSFY  H+  AY HLMNE+D E LKW++ F+ YDLYSKS    DVE +K
Sbjct: 179 LPEEALYMIRYHSFYPWHREGAYTHLMNEKDEEMLKWVKAFNPYDLYSKSDDPPDVEALK 238

Query: 246 PYYLSLIEKYFPAKLKW 262
           PYY  LI+KYFP  L+W
Sbjct: 239 PYYQELIDKYFPGVLEW 255

Family of uncharacterized eukaryotic function. Some members have a described putative function, but a common theme is not evident. Length = 255

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 262
PF05153253 DUF706: Family of unknown function (DUF706) ; Inte 100.0
KOG1573204 consensus Aldehyde reductase [General function pre 100.0
TIGR03276179 Phn-HD phosphonate degradation operons associated 97.2
smart00471124 HDc Metal dependent phosphohydrolases with conserv 95.75
TIGR0027780 HDIG uncharacterized domain HDIG. This domain is f 94.19
PF01966122 HD: HD domain; InterPro: IPR006674 This domain is 93.44
TIGR00488158 putative HD superfamily hydrolase of NAD metabolis 93.36
COG4341186 Predicted HD phosphohydrolase [General function pr 91.95
PRK00106535 hypothetical protein; Provisional 91.33
PF08668196 HDOD: HDOD domain; InterPro: IPR013976 This domain 90.81
TIGR01596177 cas3_HD CRISPR-associated endonuclease Cas3-HD. CR 90.08
TIGR03319514 YmdA_YtgF conserved hypothetical protein YmdA/YtgF 88.46
cd00077145 HDc Metal dependent phosphohydrolases with conserv 88.41
COG2316212 Predicted hydrolase (HD superfamily) [General func 87.51
TIGR00295164 conserved hypothetical protein TIGR00295. This set 82.73
PRK12705508 hypothetical protein; Provisional 80.46
>PF05153 DUF706: Family of unknown function (DUF706) ; InterPro: IPR007828 Inositol oxygenase (1 Back     alignment and domain information 
Probab=100.00  E-value=2.6e-146  Score=987.67  Aligned_cols=250  Identities=68%  Similarity=1.202  Sum_probs=201.7

Q ss_pred             hhHHHHHHHHHhhhcchHHHHHHHHHHhccCCCccccHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhCCCCCc
Q 024774           11 RQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDW   90 (262)
Q Consensus        11 ~~~~V~~fY~~~h~~QT~~fv~~~~~~~~~~~~~~Msi~ea~e~L~~lvDeSDPD~~l~~i~H~lQTAEaiR~d~~~pdW   90 (262)
                      +++||++|||+||++||||||++||++|++++|++|||||||++||+||||||||+|+|||+||||||||||+|||+|||
T Consensus         4 ~~~~V~~~Y~~~h~~QTv~fv~~~~~~~~~~~~~~Mti~eA~~~L~~LvDeSDPD~d~~~i~H~lQTAEaiR~d~~~~dW   83 (253)
T PF05153_consen    4 ACDRVKEFYRLQHTNQTVDFVKKMRAKYLKFDHAEMTIWEALELLNTLVDESDPDTDLPQIQHALQTAEAIRRDHPDPDW   83 (253)
T ss_dssp             -HHHHHHHHHHHHCC--HHHHHHHHHHHTT--SEEE-HHHHHHHGGG---TT-TT--S-HHHHHHHHHHHHHHHSTT-HH
T ss_pred             HhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCcceeeHHHHHHHHHHhccCccCCCchhHHHHHHHHHHHHHHhCCCcch
Confidence            67789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhccCCCCCCCCceeecCceeeecccCCCcccccccccCCCCCCCCCCCCCCcccCCCCccccccccC
Q 024774           91 LHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWG  170 (262)
Q Consensus        91 ~qLtGliHDLGKvl~l~~~~~~~QW~vvGdTfpVGC~f~~~iv~~e~f~~NPD~~~p~ynT~~GiY~~~CGLdnV~mSWg  170 (262)
                      ||||||||||||||++  ||++|||+||||||||||+|+++|||+++|++|||.+||+|||++|||+||||||||+||||
T Consensus        84 ~~LtGLiHDLGKvl~~--~~~e~QW~vvGDTfpVGC~f~~~iv~~e~f~~NpD~~~~~YnTk~GiY~~~CGLdnv~msWg  161 (253)
T PF05153_consen   84 MQLTGLIHDLGKVLAL--FGGEPQWAVVGDTFPVGCAFSESIVFPEFFKDNPDSKNPRYNTKYGIYEPNCGLDNVMMSWG  161 (253)
T ss_dssp             HHHHHHHTTGGGHHHH--C-T--GGGTSS---BSSS---TTSTTCCC-TT-GGGCSTTTSSSSTT--TT--GGGS-B-SS
T ss_pred             hhheehhccchhhhhh--hcCCCCceeecCceeEecccCccccChhhHhhCCCCCCccccCCCCccCCCCCccceeecCC
Confidence            9999999999999999  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHhCCCCCChhhhHHhHhccccccccccccccccChhhHHHHHHHHhcCCccceecCCCCCChhhhhhhhHH
Q 024774          171 HDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLS  250 (262)
Q Consensus       171 HDEYlY~Vlk~n~stLP~eaL~mIRyhSFypwH~~~~Y~~L~~~~D~~~l~wv~~Fn~~DLYsKs~~~pdve~l~PYY~~  250 (262)
                      ||||||+|||+|+||||+|||+|||||||||||++|+|+||||++|.+||+||++||||||||||+++||||+|||||++
T Consensus       162 HDEYlY~Vlk~n~~tLP~eaL~mIRyhSfypwH~~~~Y~~L~~~~D~~~l~wv~~Fn~~dLYSK~~~~pdve~l~PYY~~  241 (253)
T PF05153_consen  162 HDEYLYQVLKHNKSTLPEEALYMIRYHSFYPWHREGAYDHLMNEEDEEMLKWVKEFNKYDLYSKSDEPPDVEELKPYYQS  241 (253)
T ss_dssp             HHHHHHHHHHHCT----HHHHHHHHHTT-HHHHTTS--TTT--HHHHHHHHHHHHHHHHHHHT--SS---HCCCHHHHHH
T ss_pred             chHHHHHHHHcccCccCHHHHHHHHHhccccccccchhhHhhccCcHHHHHHHHHhCCcceeeCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCC
Q 024774          251 LIEKYFPAKLKW  262 (262)
Q Consensus       251 LidKY~P~~l~W  262 (262)
                      |||||||++|+|
T Consensus       242 LidKy~P~~l~W  253 (253)
T PF05153_consen  242 LIDKYFPGKLKW  253 (253)
T ss_dssp             HHHHHS-S-EEE
T ss_pred             HHHHHCCCcCCC
Confidence            999999999998

13.99.1 from EC) is involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. It may be also involved in plant ascorbate biosynthesis [, ].; GO: 0005506 iron ion binding, 0050113 inositol oxygenase activity, 0019310 inositol catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 2HUO_A 3BXD_A 2IBN_A.
>KOG1573 consensus Aldehyde reductase [General function prediction only] Back     alignment and domain information
>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein Back     alignment and domain information
>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif Back     alignment and domain information
>TIGR00277 HDIG uncharacterized domain HDIG Back     alignment and domain information
>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity [] Back     alignment and domain information
>TIGR00488 putative HD superfamily hydrolase of NAD metabolism Back     alignment and domain information
>COG4341 Predicted HD phosphohydrolase [General function prediction only] Back     alignment and domain information
>PRK00106 hypothetical protein; Provisional Back     alignment and domain information
>PF08668 HDOD: HDOD domain; InterPro: IPR013976 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity Back     alignment and domain information
>TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD Back     alignment and domain information
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF Back     alignment and domain information
>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif Back     alignment and domain information
>COG2316 Predicted hydrolase (HD superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00295 conserved hypothetical protein TIGR00295 Back     alignment and domain information
>PRK12705 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
2huo_A289 Crystal Structure Of Mouse Myo-Inositol Oxygenase I 2e-71
2ibn_A246 Crystal Structure Of Human Myo-Inositol Oxygenase ( 4e-61
2ibn_B240 Crystal Structure Of Human Myo-Inositol Oxygenase ( 4e-59
>pdb|2HUO|A Chain A, Crystal Structure Of Mouse Myo-Inositol Oxygenase In Complex With Substrate Length = 289 Back     alignment and structure 
Iteration: 1

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 127/261 (48%), Positives = 176/261 (67%), Gaps = 5/261 (1%)
Query: 3   RDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDES 62
           R+Y   G   + V   Y++ H +QT DFV + R +YG  +  +M+I E   +L+D+VDES
Sbjct: 33  RNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDES 91
Query: 63  DPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTF 122
           DPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK++ L    G PQWAVVGDTF
Sbjct: 92  DPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGEPQWAVVGDTF 148
Query: 123 PVGCAFDESIVH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKE 181
           PVGC    S+V     F++NPD  +P ++TE G+Y   CGL+NV+MSWGHD+Y+Y + K 
Sbjct: 149 PVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKF 208
Query: 182 NKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDV 241
           NK +LPS A ++IR+HSFY  H    Y+ L +++D++ L W++ F+K+DLY+K     DV
Sbjct: 209 NKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDV 268
Query: 242 EKVKPYYLSLIEKYFPAKLKW 262
           E ++PYY  LI+KY P  L W
Sbjct: 269 ESLRPYYQGLIDKYCPGTLSW 289

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
2ibn_A250 Inositol oxygenase; reductase, DIIRON, structural 1e-124
2huo_A289 Inositol oxygenase; protein-substrate complex, HD 1e-122
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4 Length = 250 Back     alignment and structure
 Score =  352 bits (905), Expect = e-124
 Identities = 123/252 (48%), Positives = 168/252 (66%), Gaps = 4/252 (1%)

Query: 12  QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQI 71
            + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P  
Sbjct: 2   MDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNS 61

Query: 72  EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDES 131
            H  QTAE IRK +PD+DW HL GL+HDLGKVL   +  G PQWAVVGDTFPVGC    S
Sbjct: 62  FHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVL---ALFGEPQWAVVGDTFPVGCRPQAS 118

Query: 132 IVH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAA 190
           +V     F++NPD  +P ++TE G+Y   CGLD V+MSWGHD+YMY V K NK +LP  A
Sbjct: 119 VVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEA 178

Query: 191 LFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLS 250
            ++IR+HSFY  H    Y+ L +++D+  L W+  F+K+DLY+K     DV+K++PYY  
Sbjct: 179 FYMIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQG 238

Query: 251 LIEKYFPAKLKW 262
           LI+KY P  L W
Sbjct: 239 LIDKYCPGILSW 250
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A* Length = 289 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
2huo_A289 Inositol oxygenase; protein-substrate complex, HD 100.0
2ibn_A250 Inositol oxygenase; reductase, DIIRON, structural 100.0
3ccg_A190 HD superfamily hydrolase; NP_347894.1, HD domain, 93.91
2o08_A188 BH1327 protein; putative HD superfamily hydrolase, 93.87
2ogi_A196 Hypothetical protein SAG1661; structural genomics, 93.4
3hc1_A305 Uncharacterized HDOD domain protein; HDOD domain p 92.39
3ljx_A288 MMOQ response regulator; structural genomics, PSI- 91.71
3i7a_A281 Putative metal-dependent phosphohydrolase; YP_9268 89.76
2qgs_A225 Protein Se1688; alpha-helical protein, structural 87.03
3m1t_A275 Putative phosphohydrolase; structural genomics, jo 85.31
3djb_A223 Hydrolase, HD family; all alpha-helical protein., 84.11
3b57_A209 LIN1889 protein; Q92AN1, X-RAY, NESG, structural g 82.5
2pq7_A220 Predicted HD superfamily hydrolase; 104161995, HD 81.75
3dto_A223 BH2835 protein; all alpha-helical protein, structu 81.45
2pjq_A231 Uncharacterized protein LP_2664; LPR71, NESG, stru 81.24
3sk9_A265 Putative uncharacterized protein TTHB187; crispr, 80.28
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A* Back     alignment and structure
Probab=100.00  E-value=5.4e-145  Score=991.49  Aligned_cols=256  Identities=50%  Similarity=0.957  Sum_probs=251.3

Q ss_pred             CCcccchhhhHHHHHHHHHhhhcchHHHHHHHHHHhccCCCccccHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHH
Q 024774            3 RDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIR   82 (262)
Q Consensus         3 R~Y~~~~~~~~~V~~fY~~~h~~QT~~fv~~~~~~~~~~~~~~Msi~ea~e~L~~lvDeSDPD~~l~~i~H~lQTAEaiR   82 (262)
                      |||++ +++++||++|||+||++|||+||++||++|++++|++|||||||++||+||||||||+|+|||+||||||||||
T Consensus        33 R~Y~~-~~~~~~V~~fYr~~H~~QTvdfv~~~~~~~~~~~~~~MtIweA~e~Ln~LvDeSDPD~dl~qi~H~lQTAEaiR  111 (289)
T 2huo_A           33 RNYTS-GPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTAEGIR  111 (289)
T ss_dssp             CCSSS-CSSHHHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCSSCTTCCSCHHHHHHHHHHHHH
T ss_pred             hCccc-chhHHHHHHHHHHHhhhhHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHhcCCcCCccchhHHHHHHHHHHHHH
Confidence            89986 66789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCCchhhhhhhccccchhccCCCCCCCCceeecCceeeecccCCCccccc-ccccCCCCCCCCCCCCCCcccCCCC
Q 024774           83 KDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHK-YFKENPDYSNPAFNTEYGVYSEGCG  161 (262)
Q Consensus        83 ~d~~~pdW~qLtGliHDLGKvl~l~~~~~~~QW~vvGdTfpVGC~f~~~iv~~e-~f~~NPD~~~p~ynT~~GiY~~~CG  161 (262)
                      +|||..||||||||||||||||++   +++|||+||||||||||+|+++|||++ +|++|||.+||+|||+||||+||||
T Consensus       112 ~d~pp~dW~qLtGLiHDLGKvl~~---~~epQW~vvGDTfpVGC~f~~~iv~~e~~F~~NpD~~~p~YnTk~GiY~p~CG  188 (289)
T 2huo_A          112 KAHPDKDWFHLVGLLHDLGKIMAL---WGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCG  188 (289)
T ss_dssp             HHCTTCHHHHHHHHHTTGGGGGGG---GTCCGGGTSSCCCBSSSCCCTTSTTTTTSCTTCGGGGSTTTSSSSTTCCTTCC
T ss_pred             HhCCCcchheeeeecccchhhhhh---cCCCceeeecCcceeccccccccccchhhccCCCCCCCccccccCCcccCCCC
Confidence            997777999999999999999987   499999999999999999999999999 9999999999999999999999999


Q ss_pred             ccccccccCcchhHHHHHHhCCCCCChhhhHHhHhccccccccccccccccChhhHHHHHHHHhcCCccceecCCCCCCh
Q 024774          162 LDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDV  241 (262)
Q Consensus       162 LdnV~mSWgHDEYlY~Vlk~n~stLP~eaL~mIRyhSFypwH~~~~Y~~L~~~~D~~~l~wv~~Fn~~DLYsKs~~~pdv  241 (262)
                      ||||+||||||||||+|||+|+||||+|||+|||||||||||++|||+||||++|.+||+||++||||||||||+++|||
T Consensus       189 LdnV~mSWGHDEYlY~Vlk~n~stLP~eaL~mIRyHSFYpwH~~gaY~~L~ne~D~~~l~wv~~Fn~yDLYSKs~~~pdv  268 (289)
T 2huo_A          189 LENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMIRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPDV  268 (289)
T ss_dssp             GGGSCBCSSHHHHHHHHHHHTTCCCCHHHHHHHHHTTCHHHHTSSCCTTTCCHHHHHHHHHHHHHHHHHHHTCCSSCCCH
T ss_pred             ccceeecccchHHHHHHHHcCCCCCCHHHHHHHHHhccCcccccccHhhhcChhHHHHHHHHHHhCcccccccCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHcCCCCCC
Q 024774          242 EKVKPYYLSLIEKYFPAKLKW  262 (262)
Q Consensus       242 e~l~PYY~~LidKY~P~~l~W  262 (262)
                      |+|||||++|||||||++|+|
T Consensus       269 e~lkpYY~~LidKY~P~~l~W  289 (289)
T 2huo_A          269 ESLRPYYQGLIDKYCPGTLSW  289 (289)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEC
T ss_pred             HHHHHHHHHHHHHHCCcccCC
Confidence            999999999999999999999
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4 Back     alignment and structure
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans} Back     alignment and structure
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens} Back     alignment and structure
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A Back     alignment and structure
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B} Back     alignment and structure
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1 Back     alignment and structure
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0 Back     alignment and structure
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1 Back     alignment and structure
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1 Back     alignment and structure
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1 Back     alignment and structure
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1 Back     alignment and structure
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1 Back     alignment and structure
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 262
d2ibna1249 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX { 1e-134
>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]} Length = 249 Back     information, alignment and structure

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  376 bits (968), Expect = e-134
 Identities = 123/251 (49%), Positives = 168/251 (66%), Gaps = 4/251 (1%)

Query: 13  EGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIE 72
           + V   Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   
Sbjct: 2   DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSF 61

Query: 73  HLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESI 132
           H  QTAE IRK +PD+DW HL GL+HDLGKVL   +  G PQWAVVGDTFPVGC    S+
Sbjct: 62  HAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVL---ALFGEPQWAVVGDTFPVGCRPQASV 118

Query: 133 VH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAAL 191
           V     F++NPD  +P ++TE G+Y   CGLD V+MSWGHD+YMY V K NK +LP  A 
Sbjct: 119 VFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAF 178

Query: 192 FIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSL 251
           ++IR+HSFY  H    Y+ L +++D+  L W+  F+K+DLY+K     DV+K++PYY  L
Sbjct: 179 YMIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGL 238

Query: 252 IEKYFPAKLKW 262
           I+KY P  L W
Sbjct: 239 IDKYCPGILSW 249

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
d2ibna1249 Myo-inositol oxygenase MioX {Human (Homo sapiens) 100.0
d3b57a1201 Uncharacterized protein Lin1889 {Listeria innocua 81.39
>d2ibna1 a.211.1.4 (A:37-285) Myo-inositol oxygenase MioX {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: MioX-like
domain: Myo-inositol oxygenase MioX
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-140  Score=943.22  Aligned_cols=247  Identities=51%  Similarity=0.971  Sum_probs=235.4

Q ss_pred             HHHHHHHHHhhhcchHHHHHHHHHHhccCCCccccHHHHHHHHHhhhcCCCCCCCchHHHHHHHHHHHHHhhCCCCCchh
Q 024774           13 EGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLH   92 (262)
Q Consensus        13 ~~V~~fY~~~h~~QT~~fv~~~~~~~~~~~~~~Msi~ea~e~L~~lvDeSDPD~~l~~i~H~lQTAEaiR~d~~~pdW~q   92 (262)
                      |||++|||+||++||||||++||++|+++++++||||||+++||+|||+||||+|+|||+||||||||||++||+|||||
T Consensus         2 drV~~~Y~~~h~~QT~dfv~~~~~~~~~~~~~~mti~eale~Ln~lvD~SDPD~~lpn~~H~~QTAE~iR~~~~~~dW~q   81 (249)
T d2ibna1           2 DRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFH   81 (249)
T ss_dssp             HHHHHHHHHHHHHCCHHHHHHHHHHHTTCCSCEECHHHHHHHGGGCCCTTC---CCCHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHhcCCcceeEHHHHHHHHHhhcCCCCCCCCchhHHHHHHHHHHHHHhCCCcchHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccccchhccCCCCCCCCceeecCceeeecccCCCccccc-ccccCCCCCCCCCCCCCCcccCCCCccccccccCc
Q 024774           93 LTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVHHK-YFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGH  171 (262)
Q Consensus        93 LtGliHDLGKvl~l~~~~~~~QW~vvGdTfpVGC~f~~~iv~~e-~f~~NPD~~~p~ynT~~GiY~~~CGLdnV~mSWgH  171 (262)
                      ||||||||||||++  | |+|||+||||||||||+|+++|||++ +|++|||..||+|||++|||+||||||||+|||||
T Consensus        82 L~GLiHDLGKvl~~--~-ge~qW~vVGDTf~vGC~~~~~iv~~e~~f~~NpD~~~~~yntk~GiY~~~CGLdNv~~SWGH  158 (249)
T d2ibna1          82 LVGLLHDLGKVLAL--F-GEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGH  158 (249)
T ss_dssp             HHHHHTTGGGHHHH--T-TCCGGGTSSCCCBSSSCCCTTSTTHHHHCTTCGGGGCTTTSSSSTTCCTTCCGGGSCBCCSH
T ss_pred             hhhhhhhhHHHhHh--c-CCCceeeecccceecccCCccccccccccccCccccCCccCCcccccCCCCCccceeeeccc
Confidence            99999999999987  6 79999999999999999999999998 69999999999999999999999999999999999


Q ss_pred             chhHHHHHHhCCCCCChhhhHHhHhccccccccccccccccChhhHHHHHHHHhcCCccceecCCCCCChhhhhhhhHHH
Q 024774          172 DDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSL  251 (262)
Q Consensus       172 DEYlY~Vlk~n~stLP~eaL~mIRyhSFypwH~~~~Y~~L~~~~D~~~l~wv~~Fn~~DLYsKs~~~pdve~l~PYY~~L  251 (262)
                      |||||+|||+|+++||+|||+|||||||||||++|+|+||||++|.+||+||++|||||||||+++.||+|+|||||++|
T Consensus       159 DEYLY~Vlk~N~~~LP~eal~mIRyHSfYpwH~~~~Y~~l~n~~D~~ml~~V~~FN~yDLYSK~d~~pd~~~lkpYY~~L  238 (249)
T d2ibna1         159 DEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGL  238 (249)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHHHHHHTTCHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHH
T ss_pred             hHHHHHHHhcCCCcCCHHHHHHHHhhccccccCcchHHHHhChhHHHHHHHHHhcCccccccCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCC
Q 024774          252 IEKYFPAKLKW  262 (262)
Q Consensus       252 idKY~P~~l~W  262 (262)
                      ||||||++|+|
T Consensus       239 idKY~pg~L~W  249 (249)
T d2ibna1         239 IDKYCPGILSW  249 (249)
T ss_dssp             HHHHSCSCEEC
T ss_pred             HHHHCCCCcCC
Confidence            99999999999
>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]} Back     information, alignment and structure