Citrus Sinensis ID: 024861

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccHHHHccccEEEEEEEEEcccccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHcccEEEEEcccccEEcHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHcccccHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccEEEcHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mkyrtstttiistkwipFVCLFCFALGIlfsnltwnppesdgrpslnvrRREQQVAVASTDCAKKAFQDQDVAKEVLKTrgaihdgsvesdrtLDKTIGQLQMELAAsrsgrempglessaanastnsrrpkVFVVIGINTafssrkrrdsvrdtwmpqgEKLIQLEREKGIIIRFMIghsatsnsildkaidsedaqhKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Flexible Loop (DISEMBL)
mkyrtstttiistkwipfVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTdcakkafqdqdvAKEVLktrgaihdgsvesdrtldKTIGQLQMELAasrsgrempGLESsaanastnsrrpkvfvvigintafssrkrrdsvrdtwmpqgekliQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Low Complexity Region (SEG)
MKYRtstttiistKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLEssaanastnsRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Disordered region (IsUnstruct)
******TTTIISTKWIPFVCLFCFALGILFSNLTWN***********************************************************************************************KVFVVIGINTAFS*********DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFII**
Disordered Region (DISOPRED)
***************IPFVCLFCFALGILFSNLTWN*******************************************RGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE********************FVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Disordered Region (DISEMBL)
********TIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNV************DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELA*********************SRRPKVFVVIGINTAFS*********DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Disordered Region (DISPRO)
*********IISTKWIPFVCLFCFALGILFSNLTWNPPE**************QVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSG******************RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILLFIIEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q6NQB7	393	Beta-1,3-galactosyltransf	yes	no	0.881	0.585	0.606	1e-80
Q9LM60	398	Probable beta-1,3-galacto	no	no	0.904	0.592	0.534	1e-65
A8MRC7	407	Probable beta-1,3-galacto	no	no	0.923	0.592	0.504	2e-62
Q9MAP8	399	Probable beta-1,3-galacto	no	no	0.919	0.601	0.472	3e-58
Q9ZV71	409	Probable beta-1,3-galacto	no	no	0.877	0.559	0.506	7e-58
Q9SAA4	384	Probable beta-1,3-galacto	no	no	0.839	0.570	0.493	2e-56
Q8LEJ9	407	Probable beta-1,3-galacto	no	no	0.885	0.567	0.481	1e-53
Q9C809	395	Probable beta-1,3-galacto	no	no	0.877	0.579	0.482	9e-52
Q5XEZ1	346	Probable beta-1,3-galacto	no	no	0.563	0.424	0.419	2e-27
Q94F27	338	Probable beta-1,3-galacto	no	no	0.567	0.437	0.417	4e-27

>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1

 Score =  300 bits (767), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 19/249 (7%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK++ S   +IS KW+PF+C+  FALG +F++ +W P    G   ++   R+ ++ + S 
Sbjct: 1   MKHKVSKR-VISLKWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSD 59

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DCA  KKA Q++DV  EVL+T  AI D     DR+LDK++  L    +++RS +EM    
Sbjct: 60  DCAHNKKATQEKDVTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEM---- 106

Query: 119 SSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
               + S  + R KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE+EKGI+I+FMI
Sbjct: 107 ---VDGSETNPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMI 163

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVD
Sbjct: 164 GHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVD 223

Query: 239 DDVHVNLGI 247
           DDVHVNLG+
Sbjct: 224 DDVHVNLGM 232

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1

 Score =  249 bits (637), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 133/249 (53%), Positives = 182/249 (73%), Gaps = 13/249 (5%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK+    +  ++  W+P +C+ CF LG +F++   +     G   +   RR+Q++ + + 
Sbjct: 1   MKHNNKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQ 60

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           D A  KK  QD DV +EVLKT  AI         +LDK++  LQ +L+A+ S +++  + 
Sbjct: 61  DYAHEKKKSQDNDVMEEVLKTHKAI--------ESLDKSVSMLQKQLSATHSPQQIVNV- 111

Query: 119 SSAANAST-NSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
            SA N+ST  +++ KVF+VIGINTAFSSRKRRDS+R+TWMPQGEKL +LE+EKGI+++FM
Sbjct: 112 -SATNSSTEGNQKNKVFMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFM 170

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHS+T NS+LDK IDSEDAQ+ DF RL+H+EGY+ LSAKTK FFS+AVAKWDA+FYVK+
Sbjct: 171 IGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKI 230

Query: 238 DDDVHVNLG 246
           DDDVHVNLG
Sbjct: 231 DDDVHVNLG 239

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1

 Score =  238 bits (608), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/250 (50%), Positives = 171/250 (68%), Gaps = 9/250 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           +K   S+ + +S KW   +CL  F +G+ F+N  WN PES G    +V   E+ + + S 
Sbjct: 5   IKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAER-LKLVSE 63

Query: 61  DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
            C  KA   ++V ++     G + +  + + +TLDKTI  L+MELAA+RS +E   L++ 
Sbjct: 64  GCNPKALYQKEVKRDPQALFGEVANTHI-ALQTLDKTISSLEMELAAARSVQE--SLQNG 120

Query: 121 AA-NASTNSRRP----KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
           A  +     ++P    +  +V+GINTAFSSRKRRDS+R TWMPQGEK  +LE EKGIIIR
Sbjct: 121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           F+IGHSAT+  ILD+AI++ED +H DFLRL+H+EGY ELS KTK +FSTA + WDADFYV
Sbjct: 181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query: 236 KVDDDVHVNL 245
           KVDDDVHVN+
Sbjct: 241 KVDDDVHVNI 250

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1

 Score =  225 bits (573), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/258 (47%), Positives = 170/258 (65%), Gaps = 18/258 (6%)

Query: 2   KYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPES-DGRPSLNVRRREQQVAVAS- 59
           +Y+ S T+ +S +W+  +C+  F LG+L  N      E+ DG    +  + +Q  ++   
Sbjct: 5   RYQKSATSGVSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPL 64

Query: 60  TDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLES 119
            DC  K   + D+   V  T   I        +TLDKTI  L++ELA +R+ R   G + 
Sbjct: 65  VDCESK---EGDILSRVSHTHDVI--------KTLDKTISSLEVELATARAARS-DGRDG 112

Query: 120 SAANAST----NSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
           S A A T    +  RP++F V+GI TAFSSRKRRDS+R TW+P+G++L +LE EKGII+R
Sbjct: 113 SPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMR 172

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           F+IGHS++   +LD  I++E+ QHKDF RL HIEGYHELS+KT+I+FS+AVAKWDADFY+
Sbjct: 173 FVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYI 232

Query: 236 KVDDDVHVNLGICFCNLS 253
           KVDDDVHVNLG+    L+
Sbjct: 233 KVDDDVHVNLGMLGSTLA 250

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1

 Score =  223 bits (569), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 163/247 (65%), Gaps = 18/247 (7%)

Query: 9   TIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQ 68
           +++S KW   +C   F  GILF++  W  PES   P  +V    +++ + S  C  K   
Sbjct: 14  SLVSKKWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERLKLISEGCDPKTLY 73

Query: 69  DQDVAK-------EVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSA 121
            ++V +       EV KT  AI        +TLDKTI  L+MELAA+RS +E     +  
Sbjct: 74  QKEVNRDPQALFGEVSKTHNAI--------QTLDKTISSLEMELAAARSAQESLVNGAPI 125

Query: 122 ANASTNSRRP---KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
           +N     + P   +  +V+GINTAFSSRKRRDSVR TWMP GEK  +LE EKGIIIRF+I
Sbjct: 126 SNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGIIIRFVI 185

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSAT+  ILD++I++ED +H DFLRL+H+EGY ELS KTK +FSTAV+KWDA+FYVKVD
Sbjct: 186 GHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVD 245

Query: 239 DDVHVNL 245
           DDVHVN+
Sbjct: 246 DDVHVNI 252

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/245 (49%), Positives = 158/245 (64%), Gaps = 26/245 (10%)

Query: 3   YRTSTTTIISTKWIPFVCLFCFALGILFSNLTWN-PPESDGRPSLNVRRREQQVAVASTD 61
           Y  +   ++S   + F+CL  F LG+ F+N  WN  PE+ G           +++++S+D
Sbjct: 9   YNFTPRNVVSRNSVFFMCLASFCLGMFFTNRMWNIVPEARGISR------LSKLSLSSSD 62

Query: 62  CAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSA 121
           C KK                 + D    +   LDK+I  L+M+L A+R+ RE     S  
Sbjct: 63  CDKKN----------------VLDYGNNTIGILDKSISNLEMKLVAARAERESL---SGK 103

Query: 122 ANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHS 181
            N S  +++ K F+VIGINTAFSSRKRRDSVR TWMPQGE L +LE EKGII+RF+IGHS
Sbjct: 104 FNISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHS 163

Query: 182 ATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDV 241
             S+ ILDKAI++E+  H DFLRLEH EGY +LSAKTK FF+TAV+ WDA+FY+KVDDDV
Sbjct: 164 VLSHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDV 223

Query: 242 HVNLG 246
           HVNL 
Sbjct: 224 HVNLA 228

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1

 Score =  209 bits (533), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/249 (48%), Positives = 170/249 (68%), Gaps = 18/249 (7%)

Query: 5   TSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC-- 62
           +++ + +S KW  F+C+  F  GILFS+  W  PES+   S +    ++++ + S DC  
Sbjct: 13  SASKSFVSKKWTLFLCIGFFCAGILFSDRMWPEPESN-VVSRDTVASDERLRLESEDCDS 71

Query: 63  AKKAF--QDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
           +KK    + +D+  +V K+  AI        +TLDKTI +L+ ELA +R+ +E     S 
Sbjct: 72  SKKGLKRESKDILGDVYKSPDAI--------QTLDKTISKLETELADARAAQESIMNGSP 123

Query: 121 AAN----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
            ++      T ++R K  +V+G+NTAFSSRKRRDSVR TWMP GE+  +LE EKGI++RF
Sbjct: 124 VSDDFKLPETVTKR-KYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRF 182

Query: 177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
           +IGHS+T   ILD+AI +E+++H DFLRL+H+EGY ELSAKTK +F+TA A WDADFYVK
Sbjct: 183 VIGHSSTPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVK 242

Query: 237 VDDDVHVNL 245
           VDDDVHVN+
Sbjct: 243 VDDDVHVNI 251

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1

 Score =  203 bits (517), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/251 (48%), Positives = 163/251 (64%), Gaps = 22/251 (8%)

Query: 12  STKWIPFVCLFCFALGILFSNLT----WNPPESDGRPSLNVRRREQQVAVASTDCAKKA- 66
           S K I  +CL  F  G LF + T    + P E D   + ++ +  +       DC +   
Sbjct: 7   SGKAIIVLCLASFLAGSLFMSRTLSRSYIPEEEDHHLTKHLSKHLE----IQKDCDEHKR 62

Query: 67  ----FQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAA 122
                + +D+  EV +T  A+        ++L++T+  L+MELAA+R+        S  +
Sbjct: 63  KLIESKSRDIIGEVSRTHQAV--------KSLERTMSTLEMELAAARTSDRSSEFWSERS 114

Query: 123 NASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSA 182
            A   SR  KVF VIGINTAFSS+KRRDSVR TWMP GEKL ++E+EKGI++RF+IGHSA
Sbjct: 115 -AKNQSRLQKVFAVIGINTAFSSKKRRDSVRQTWMPTGEKLKKIEKEKGIVVRFVIGHSA 173

Query: 183 TSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVH 242
           T   +LDKAID ED++HKDFLRL+HIEGYH+LS KT+++FSTA A +DA+FYVKVDDDVH
Sbjct: 174 TPGGVLDKAIDEEDSEHKDFLRLKHIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVH 233

Query: 243 VNLGICFCNLS 253
           VNLG+    L+
Sbjct: 234 VNLGMLVTTLA 244

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 8/155 (5%)

Query: 92  RTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDS 151
           + L++ I + +MEL  ++S   +  L+S +++        K+  VIG+ + F S  RR++
Sbjct: 84  KDLERRIVETEMELTLAKSQGYLKNLKSGSSSG------KKLLAVIGVYSGFGSHLRRNT 137

Query: 152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
            R ++MPQG+ L +LE E+GI+IRF+IG S      LD+ ID E+   KDFL LE H E 
Sbjct: 138 FRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEA 196

Query: 211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
             EL+ K K FFS AV  WDA+FY+KVDD++ ++L
Sbjct: 197 QEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDL 231

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1

 Score =  121 bits (304), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 10/158 (6%)

Query: 92  RTLDKTIGQLQMELAASRSGREMPGLESSA---ANASTNSRRPKVFVVIGINTAFSSRKR 148
           R   KT+  L+MEL+++R      G  S +   A+ +   +RP   VVIGI T+  ++K+
Sbjct: 72  REQKKTLAALEMELSSARQ----EGFVSKSPKLADGTETKKRP--LVVIGIMTSLGNKKK 125

Query: 149 RDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEH- 207
           RD+VR  WM  G  L +LE EKG+I RF+IG SA     +DK+ID+E++Q  DF+ L+  
Sbjct: 126 RDAVRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDV 185

Query: 208 IEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
           +E   E S K K+FF+ A  +WDA FY K  D+++VN+
Sbjct: 186 VEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNI 223

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
255545564	396	Beta-1,3-galactosyltransferase sqv-2, pu	0.931	0.613	0.653	5e-86
356548603	397	PREDICTED: beta-1,3-galactosyltransferas	0.927	0.609	0.640	1e-83
224066889	390	predicted protein [Populus trichocarpa]	0.911	0.610	0.656	3e-83
225459437	397	PREDICTED: beta-1,3-galactosyltransferas	0.927	0.609	0.624	9e-83
356551604	400	PREDICTED: beta-1,3-galactosyltransferas	0.938	0.612	0.637	1e-81
297842561	395	galactosyltransferase family protein [Ar	0.911	0.602	0.602	9e-81
356509466	394	PREDICTED: beta-1,3-galactosyltransferas	0.927	0.614	0.628	9e-81
224082202	397	predicted protein [Populus trichocarpa]	0.888	0.584	0.659	1e-79
42563297	393	beta-1,3-galactosyltransferase 7 [Arabid	0.881	0.585	0.606	6e-79
357461703	395	Avr9 elicitor response protein [Medicago	0.927	0.612	0.592	3e-78

>gi|255545564|ref|XP_002513842.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223546928|gb|EEF48425.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 168/257 (65%), Positives = 193/257 (75%), Gaps = 14/257 (5%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R S    +S KWIPF+C+F F LGILFS   W+P ES+G+  +   R EQ++ + S 
Sbjct: 1   MKARASAK--VSVKWIPFICVFSFVLGILFSIRAWDPSESNGQQLIAQHRHEQELQLVSE 58

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREM--PG 116
           D    KK   D+DV  EVLKT  AI        ++LDK+I  LQME+AASRS +EM   G
Sbjct: 59  DSTSQKKLSNDKDVMGEVLKTHEAI--------QSLDKSIAMLQMEIAASRSSQEMNLDG 110

Query: 117 LESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
             S          R KVF+VIGINTAFSSRKRRDSVR+TWMPQGEKL+QLEREKGIIIRF
Sbjct: 111 ASSVVTPHLEGPPRQKVFMVIGINTAFSSRKRRDSVRETWMPQGEKLVQLEREKGIIIRF 170

Query: 177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
           MIGHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+K
Sbjct: 171 MIGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIK 230

Query: 237 VDDDVHVNLGICFCNLS 253
           VDDDVHVNLG+    L+
Sbjct: 231 VDDDVHVNLGMLAATLA 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548603|ref|XP_003542690.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 166/259 (64%), Positives = 193/259 (74%), Gaps = 17/259 (6%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R+S    IS KW+P   +F F +G+L +   W PPES+G   L+  R EQ++ V S 
Sbjct: 1   MKIRSSKK--ISAKWVPVFSVFSFLIGMLITTRIWEPPESNG-VFLSNHRHEQELQVVSG 57

Query: 61  DCA-KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLES 119
           DCA KK  QD DV  +V KT GAI        ++LDK +  LQMELAA+RS RE    + 
Sbjct: 58  DCAPKKPVQDNDVMNKVYKTHGAI--------QSLDKQVSMLQMELAAARSTREHKISDG 109

Query: 120 SAAN-----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIII 174
           SA       ++    R KVFVVIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+I
Sbjct: 110 SANTLASGVSTEGPPRKKVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVI 169

Query: 175 RFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY 234
           RFMIGHSATSNSILD+AIDSE+AQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDADFY
Sbjct: 170 RFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFY 229

Query: 235 VKVDDDVHVNLGICFCNLS 253
           VKVDDDVHVNLG+    L+
Sbjct: 230 VKVDDDVHVNLGVLATTLA 248

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066889|ref|XP_002302264.1| predicted protein [Populus trichocarpa] gi|222843990|gb|EEE81537.1| predicted protein [Populus trichocarpa]

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 168/256 (65%), Positives = 196/256 (76%), Gaps = 18/256 (7%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNP-PESDGRPSLNVRRREQQVAVAS 59
           MK R +T      KWIPF+C+FCFALGILFSN  W+   E +G+  L+ RR EQ++ V +
Sbjct: 1   MKGRVTTKASAPAKWIPFLCVFCFALGILFSNRLWDSSAEPNGQQLLSQRRHEQELQVIN 60

Query: 60  TDCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGL 117
            D    KK  Q++DV  EVLKT   I        ++LDK+I  LQ +LA S+S +EM  L
Sbjct: 61  GDSTTNKKLSQNKDVMDEVLKTHEVI--------QSLDKSIAVLQTQLA-SKSSQEM-SL 110

Query: 118 ESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
           +SSA        R KVF+VIGINTAFSSRKRRDSVR+TWMPQGEKL+QLEREKGII+RFM
Sbjct: 111 KSSAPVP-----RQKVFMVIGINTAFSSRKRRDSVRETWMPQGEKLVQLEREKGIIVRFM 165

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FYVKV
Sbjct: 166 IGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYVKV 225

Query: 238 DDDVHVNLGICFCNLS 253
           DDDVHVNLG+    L+
Sbjct: 226 DDDVHVNLGMLASTLA 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459437|ref|XP_002285826.1| PREDICTED: beta-1,3-galactosyltransferase 7 [Vitis vinifera] gi|302141885|emb|CBI19088.3| unnamed protein product [Vitis vinifera]

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 161/258 (62%), Positives = 193/258 (74%), Gaps = 16/258 (6%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R+S     S KWIP +C+ CF  G+L +N  W PPES+ +  ++ R+ EQ++ + S 
Sbjct: 1   MKNRSSKK--FSAKWIPIICVLCFCFGMLLTNRLWTPPESNSQ-LISRRQHEQELQIISE 57

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
            C   KK  Q++DV +EV KT  AI        + LDK+I  LQMEL+A+R+ +EM   +
Sbjct: 58  GCTTKKKPTQERDVMEEVQKTHEAI--------QYLDKSISMLQMELSATRNSQEMRSSD 109

Query: 119 SSAA---NASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
            S A   ++S  S R KVFVVIGINTAFSSRKRRDSVR TWMPQGEKL+QLEREKGI+IR
Sbjct: 110 GSGAISTSSSGVSERKKVFVVIGINTAFSSRKRRDSVRATWMPQGEKLLQLEREKGIVIR 169

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           FMIGHSAT NSILD+AIDSEDA H DFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FYV
Sbjct: 170 FMIGHSATPNSILDRAIDSEDAHHNDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYV 229

Query: 236 KVDDDVHVNLGICFCNLS 253
           KVDDDVHVNLG+    L+
Sbjct: 230 KVDDDVHVNLGMLVATLA 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551604|ref|XP_003544164.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/259 (63%), Positives = 192/259 (74%), Gaps = 14/259 (5%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK RTS    IS KW+P   +  F +G+L +   W PPES+G   L+  R EQ++ V S 
Sbjct: 1   MKTRTSKK--ISAKWVPIFSVSSFLIGMLITTRMWEPPESNG-VLLSNHRHEQELQVVSG 57

Query: 61  DCA-KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMP---G 116
           DCA KK  QD+DV  +V KT  AI     +  R+LDK +  LQMELAA+RS RE     G
Sbjct: 58  DCATKKPVQDEDVMSKVYKTHEAI-----QGVRSLDKQVSMLQMELAAARSTREPEISDG 112

Query: 117 LESSAANASTNSRRP--KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIII 174
             ++ A+  T    P  KVFVVIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+I
Sbjct: 113 SNNTLASGVTTEGPPRKKVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVI 172

Query: 175 RFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY 234
           RFMIGHSATSNSILD+AIDSE+AQHKDFLRLEH EGYHELSAKTK FFSTAVAKWDA+FY
Sbjct: 173 RFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHAEGYHELSAKTKTFFSTAVAKWDAEFY 232

Query: 235 VKVDDDVHVNLGICFCNLS 253
           VKVDDDVHVNLG+    L+
Sbjct: 233 VKVDDDVHVNLGVLATTLA 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842561|ref|XP_002889162.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335003|gb|EFH65421.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 150/249 (60%), Positives = 199/249 (79%), Gaps = 11/249 (4%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK++ S   +IS KW+PF+C+  FALG +F++ +W PP   G   ++  RR+ ++ + S 
Sbjct: 1   MKHKVSKR-VISLKWVPFLCISFFALGAIFTSRSWEPPSDSGSQLISQLRRDHELQIVSD 59

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DCA  KKA Q++DV  +VL+T  AI     + DR+LDK++  L+M+LA++++ ++  G E
Sbjct: 60  DCAHNKKATQEKDVIDQVLRTHEAI-----QGDRSLDKSVSTLEMQLASTKTSQD--GSE 112

Query: 119 SSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
           ++ +      R+ KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE++KGI+I+FMI
Sbjct: 113 TTNSLTGETPRK-KVFMVMGINTAFSSRKRRDSVRETWMPQGEKLEKLEQDKGIVIKFMI 171

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVD
Sbjct: 172 GHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVD 231

Query: 239 DDVHVNLGI 247
           DDVHVNLG+
Sbjct: 232 DDVHVNLGM 240

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509466|ref|XP_003523469.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 161/256 (62%), Positives = 192/256 (75%), Gaps = 14/256 (5%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK RTST   IS  WIP   +F F +G+L ++  W+PPES+G  +   +R +QQ+ V S 
Sbjct: 1   MKTRTSTK--ISATWIPIFSVFSFIIGMLVTSRMWDPPESNGLLTAQHQRDQQQLQVISG 58

Query: 61  DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
           DCA K  Q +D   E+ KT  AI        + LDK +  LQMELAA+RS RE  G+  S
Sbjct: 59  DCATKKMQPKDAVSELQKTHEAI--------QALDKQVSMLQMELAAARSSRE-SGISDS 109

Query: 121 AANASTNSR---RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
            A+ +T+     R K F+VIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+IRFM
Sbjct: 110 NASTTTSGEGAPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFM 169

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHSATSNSILD+AIDSE+AQHKDFLRLEH+EGYHELSAKTKIFFSTAV+ WDADFYVKV
Sbjct: 170 IGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVSMWDADFYVKV 229

Query: 238 DDDVHVNLGICFCNLS 253
           DDDVHVNLG+    L+
Sbjct: 230 DDDVHVNLGVLATTLA 245

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082202|ref|XP_002306601.1| predicted protein [Populus trichocarpa] gi|222856050|gb|EEE93597.1| predicted protein [Populus trichocarpa]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/247 (65%), Positives = 190/247 (76%), Gaps = 15/247 (6%)

Query: 8   TTIISTKWIPFVCLFCFALGILFSNLTWNP-PESDGRPSLNVRRREQQVAVASTDCA--K 64
           TT  S KWI F+C+FCFA+G LFSN  W+   E +G+  L+ RR EQ + V + D    K
Sbjct: 4   TTKASVKWILFLCVFCFAIGTLFSNRLWDSSAEPNGQQLLSQRRHEQVLQVINDDSTTNK 63

Query: 65  KAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAANA 124
               + D   EVLKT  AI   S      LDK++  LQM+LAASRS +EM  L+SSAA  
Sbjct: 64  NLSHNNDAMDEVLKTHEAIQLVS------LDKSVAMLQMQLAASRSSQEMS-LDSSAA-V 115

Query: 125 STNSR----RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGH 180
           ST SR    + KVF+VIGINTAFSSRKRRDS+R+TWMPQG+KL+QLER+KGII+RFMIG 
Sbjct: 116 STLSRDGSAKQKVFMVIGINTAFSSRKRRDSIRETWMPQGKKLMQLERDKGIIVRFMIGQ 175

Query: 181 SATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDD 240
           SATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTK FFSTAVAKWDA+FYVKVDDD
Sbjct: 176 SATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKNFFSTAVAKWDAEFYVKVDDD 235

Query: 241 VHVNLGI 247
           VHVNLG+
Sbjct: 236 VHVNLGM 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563297|ref|NP_177904.3| beta-1,3-galactosyltransferase 7 [Arabidopsis thaliana] gi|75127158|sp|Q6NQB7.1|B3GT7_ARATH RecName: Full=Beta-1,3-galactosyltransferase 7 gi|34365705|gb|AAQ65164.1| At1g77810 [Arabidopsis thaliana] gi|51969108|dbj|BAD43246.1| unnamed protein product [Arabidopsis thaliana] gi|62320114|dbj|BAD94299.1| At1g77810 [Arabidopsis thaliana] gi|332197908|gb|AEE36029.1| beta-1,3-galactosyltransferase 7 [Arabidopsis thaliana]

 Score =  300 bits (767), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 19/249 (7%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK++ S   +IS KW+PF+C+  FALG +F++ +W P    G   ++   R+ ++ + S 
Sbjct: 1   MKHKVSKR-VISLKWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSD 59

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DCA  KKA Q++DV  EVL+T  AI D     DR+LDK++  L    +++RS +EM    
Sbjct: 60  DCAHNKKATQEKDVTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEM---- 106

Query: 119 SSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
               + S  + R KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE+EKGI+I+FMI
Sbjct: 107 ---VDGSETNPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMI 163

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVD
Sbjct: 164 GHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVD 223

Query: 239 DDVHVNLGI 247
           DDVHVNLG+
Sbjct: 224 DDVHVNLGM 232

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461703|ref|XP_003601133.1| Avr9 elicitor response protein [Medicago truncatula] gi|355490181|gb|AES71384.1| Avr9 elicitor response protein [Medicago truncatula] gi|388513949|gb|AFK45036.1| unknown [Medicago truncatula]

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/253 (59%), Positives = 184/253 (72%), Gaps = 11/253 (4%)

Query: 4   RTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC- 62
           +T  +T IS KWIP   +F F +G+L +   W  PES+G      +R +Q++ V S DC 
Sbjct: 2   KTRASTKISAKWIPIFSVFSFLIGMLITTRMWEQPESNGVIISKHQRDQQELQVISEDCD 61

Query: 63  --AKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
              KK  + +D   E+ KT  AI        + LDK +  LQMELAA+RS R+     S+
Sbjct: 62  VTKKKQEKPKDEMNELYKTHEAI--------QALDKQVSMLQMELAAARSSRKKNSTGSA 113

Query: 121 AANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGH 180
             ++   S++ K F+VIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+IRFMIGH
Sbjct: 114 TNSSEGASKKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 173

Query: 181 SATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDD 240
           SATSNSILD+AIDSE+AQHKDFLRL+H+EGYHELSAKTKIFFSTAV  WDADFYVKVDDD
Sbjct: 174 SATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVGLWDADFYVKVDDD 233

Query: 241 VHVNLGICFCNLS 253
           VHVNLG+    L+
Sbjct: 234 VHVNLGVLAATLA 246

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
TAIR|locus:2029471	393	AT1G77810 [Arabidopsis thalian	0.854	0.567	0.609	5.3e-72
TAIR|locus:505006138	398	DD46 [Arabidopsis thaliana (ta	0.908	0.595	0.524	2e-63
TAIR|locus:2207225	407	AT1G05170 [Arabidopsis thalian	0.881	0.565	0.519	7.5e-57
TAIR|locus:2062545	409	AT2G32430 [Arabidopsis thalian	0.885	0.564	0.502	2.9e-55
TAIR|locus:2027352	384	AT1G11730 [Arabidopsis thalian	0.570	0.388	0.651	6.1e-54
TAIR|locus:2116452	407	AT4G26940 [Arabidopsis thalian	0.862	0.552	0.493	6.3e-53
TAIR|locus:2038031	399	AT1G32930 [Arabidopsis thalian	0.900	0.588	0.454	3.5e-52
TAIR|locus:2154247	338	AT5G53340 [Arabidopsis thalian	0.578	0.446	0.406	4e-26
TAIR|locus:2059531	346	AT2G25300 [Arabidopsis thalian	0.563	0.424	0.412	6.6e-26
TAIR|locus:2116627	345	AT4G32120 [Arabidopsis thalian	0.563	0.426	0.419	2.9e-25

TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 148/243 (60%), Positives = 184/243 (75%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCA--KKAFQDQD 71
             KW+PF+C+  FALG +F++ +W P    G   ++   R+ ++ + S DCA  KKA Q++D
Sbjct:    13 KWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSDDCAHNKKATQEKD 72

Query:    72 VAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREM-PGLEXXXXXXXXXXRR 130
             V  EVL+T  AI D     DR+LDK++  L    +++RS +EM  G E           R
Sbjct:    73 VTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEMVDGSETNP--------R 115

Query:   131 PKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
              KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE+EKGI+I+FMIGHSATSNSILD+
Sbjct:   116 KKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSILDR 175

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFC 250
             AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVDDDVHVNLG+   
Sbjct:   176 AIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLAS 235

Query:   251 NLS 253
              L+
Sbjct:   236 TLA 238

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0048531 "beta-1,3-galactosyltransferase activity" evidence=IDA

TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 130/248 (52%), Positives = 172/248 (69%)

Query:     1 MKYRXXXXXXXXXKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
             MK+           W+P +C+ CF LG +F++   +     G   +   RR+Q++ + + 
Sbjct:     1 MKHNNKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQ 60

Query:    61 DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
             D A  KK  QD DV +EVLKT  AI     ES   LDK++  LQ +L+A+ S +++  + 
Sbjct:    61 DYAHEKKKSQDNDVMEEVLKTHKAI-----ES---LDKSVSMLQKQLSATHSPQQIVNVS 112

Query:   119 XXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
                       +  KVF+VIGINTAFSSRKRRDS+R+TWMPQGEKL +LE+EKGI+++FMI
Sbjct:   113 ATNSSTEGNQKN-KVFMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMI 171

Query:   179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
             GHS+T NS+LDK IDSEDAQ+ DF RL+H+EGY+ LSAKTK FFS+AVAKWDA+FYVK+D
Sbjct:   172 GHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKID 231

Query:   239 DDVHVNLG 246
             DDVHVNLG
Sbjct:   232 DDVHVNLG 239

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 122/235 (51%), Positives = 158/235 (67%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVA 73
             KW   +CL  F +G+ F+N  WN PES G    +V   E+ + + S  C  KA   ++V 
Sbjct:    18 KWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAER-LKLVSEGCNPKALYQKEVK 76

Query:    74 KEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGLEXXXXXXXXXXRRP 131
             ++     G + +  +   +TLDKTI  L+MELAA+RS +E    G            +  
Sbjct:    77 RDPQALFGEVANTHIAL-QTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQ 135

Query:   132 KVFV-VIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
             + F+ V+GINTAFSSRKRRDS+R TWMPQGEK  +LE EKGIIIRF+IGHSAT+  ILD+
Sbjct:   136 RRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDR 195

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
             AI++ED +H DFLRL+H+EGY ELS KTK +FSTA + WDADFYVKVDDDVHVN+
Sbjct:   196 AIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNI 250

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 118/235 (50%), Positives = 155/235 (65%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVA 73
             KW   +C   F  GILF++  W  PES   P  +V    +++ + S  C  K    ++V 
Sbjct:    19 KWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERLKLISEGCDPKTLYQKEVN 78

Query:    74 KEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRP-- 131
             ++     G +   +  + +TLDKTI  L+MELAA+RS +E               + P  
Sbjct:    79 RDPQALFGEVSK-THNAIQTLDKTISSLEMELAAARSAQESLVNGAPISNDMEKKQLPGK 137

Query:   132 -KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
              +  +V+GINTAFSSRKRRDSVR TWMP GEK  +LE EKGIIIRF+IGHSAT+  ILD+
Sbjct:   138 RRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGIIIRFVIGHSATAGGILDR 197

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
             +I++ED +H DFLRL+H+EGY ELS KTK +FSTAV+KWDA+FYVKVDDDVHVN+
Sbjct:   198 SIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNI 252

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
 Identities = 99/152 (65%), Positives = 118/152 (77%)

Query:    94 LDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVR 153
             LDK+I  L+M+L A+R+ RE   L           +R K F+VIGINTAFSSRKRRDSVR
Sbjct:    79 LDKSISNLEMKLVAARAERE--SLSGKFNISNEAKKR-KYFMVIGINTAFSSRKRRDSVR 135

Query:   154 DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHE 213
              TWMPQGE L +LE EKGII+RF+IGHS  S+ ILDKAI++E+  H DFLRLEH EGY +
Sbjct:   136 STWMPQGENLKKLEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEGYMK 195

Query:   214 LSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
             LSAKTK FF+TAV+ WDA+FY+KVDDDVHVNL
Sbjct:   196 LSAKTKTFFATAVSLWDAEFYIKVDDDVHVNL 227

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 117/237 (49%), Positives = 163/237 (68%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC--AKKAFQDQD 71
             KW  F+C+  F  GILFS+  W  PES+   S +    ++++ + S DC  +KK  + + 
Sbjct:    22 KWTLFLCIGFFCAGILFSDRMWPEPESNV-VSRDTVASDERLRLESEDCDSSKKGLKRE- 79

Query:    72 VAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGLEXXXXXXX-XXX 128
              +K++L   G ++  S ++ +TLDKTI +L+ ELA +R+ +E  M G             
Sbjct:    80 -SKDIL---GDVYK-SPDAIQTLDKTISKLETELADARAAQESIMNGSPVSDDFKLPETV 134

Query:   129 RRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSIL 188
              + K  +V+G+NTAFSSRKRRDSVR TWMP GE+  +LE EKGI++RF+IGHS+T   IL
Sbjct:   135 TKRKYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGIL 194

Query:   189 DKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
             D+AI +E+++H DFLRL+H+EGY ELSAKTK +F+TA A WDADFYVKVDDDVHVN+
Sbjct:   195 DRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNI 251

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 114/251 (45%), Positives = 158/251 (62%)

Query:     2 KYRXXXXXXXXXKWIPFVCLFCFALGILFSNLTWNPPES-DGRPSLNVRRREQQVAVAS- 59
             +Y+         +W+  +C+  F LG+L  N      E+ DG    +  + +Q  ++   
Sbjct:     5 RYQKSATSGVSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPL 64

Query:    60 TDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGL 117
              DC  K   + D+   V  T   I        +TLDKTI  L++ELA +R+ R     G 
Sbjct:    65 VDCESK---EGDILSRVSHTHDVI--------KTLDKTISSLEVELATARAARSDGRDGS 113

Query:   118 EXXXXXXXXXXR-RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
                        + RP++F V+GI TAFSSRKRRDS+R TW+P+G++L +LE EKGII+RF
Sbjct:   114 PAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRF 173

Query:   177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
             +IGHS++   +LD  I++E+ QHKDF RL HIEGYHELS+KT+I+FS+AVAKWDADFY+K
Sbjct:   174 VIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIK 233

Query:   237 VDDDVHVNLGI 247
             VDDDVHVNLG+
Sbjct:   234 VDDDVHVNLGM 244

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 63/155 (40%), Positives = 92/155 (59%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             R   KT+  L+MEL+++R                   +RP   VVIGI T+  ++K+RD+
Sbjct:    72 REQKKTLAALEMELSSARQ-EGFVSKSPKLADGTETKKRP--LVVIGIMTSLGNKKKRDA 128

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI-EG 210
             VR  WM  G  L +LE EKG+I RF+IG SA     +DK+ID+E++Q  DF+ L+ + E 
Sbjct:   129 VRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEA 188

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
               E S K K+FF+ A  +WDA FY K  D+++VN+
Sbjct:   189 PEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNI 223

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 64/155 (41%), Positives = 94/155 (60%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             + L++ I + +MEL  ++S   +  L+             K+  VIG+ + F S  RR++
Sbjct:    84 KDLERRIVETEMELTLAKSQGYLKNLKSGSSSGK------KLLAVIGVYSGFGSHLRRNT 137

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
              R ++MPQG+ L +LE E+GI+IRF+IG S      LD+ ID E+   KDFL LE H E 
Sbjct:   138 FRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEA 196

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
               EL+ K K FFS AV  WDA+FY+KVDD++ ++L
Sbjct:   197 QEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDL 231

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 65/155 (41%), Positives = 92/155 (59%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             + L++ I + +MELA ++S     G            +  K+  VIG+ T F S  +R+ 
Sbjct:    83 KDLERRIVETEMELAQAKS----QGYLKKQKSVSSSGK--KMLAVIGVYTGFGSHLKRNK 136

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
              R +WMP+ + L +LE E+G++IRF+IG SA     LD+ ID E+   KDFL LE H E 
Sbjct:   137 FRGSWMPRDDALKKLE-ERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEA 195

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245
               EL  K K F+S AV  WDA+FYVKVDD+V ++L
Sbjct:   196 QEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDL 230

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_II0817 hypothetical protein (390 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	261
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	2e-90
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	9e-28
pfam13334	89	pfam13334, DUF4094, Domain of unknown function (DU	6e-26

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score =  272 bits (697), Expect = 2e-90
 Identities = 134/252 (53%), Positives = 167/252 (66%), Gaps = 23/252 (9%)

Query: 6   STTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKK 65
           S+ +++S KW   +CL CF  G+LF++  W  PES G     V   E+ + + S  C  K
Sbjct: 11  SSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAER-LKLVSEGCDPK 69

Query: 66  AFQDQDVAK-------EVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE----- 113
               ++V +       EV KT  AI        +TLDKTI  L+MELAA+R+ +E     
Sbjct: 70  TLYQKEVKRDSKDIIGEVSKTHNAI--------QTLDKTISNLEMELAAARAAQESILNG 121

Query: 114 MPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGII 173
            P  E      S+  RR    +V+GINTAFSSRKRRDSVR TWMPQGEK  +LE EKGII
Sbjct: 122 SPISEDLKKTQSSGKRR--YLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGII 179

Query: 174 IRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADF 233
           IRF+IGHSATS  ILD+AI++ED +H DFLRL+H+EGY ELSAKTK +F+TAVA WDADF
Sbjct: 180 IRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADF 239

Query: 234 YVKVDDDVHVNL 245
           YVKVDDDVHVN+
Sbjct: 240 YVKVDDDVHVNI 251

Length = 408

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  105 bits (263), Expect = 9e-28
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)

Query: 147 KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE 206
            RR+++R TWM +G           I   F++G SA ++  +   +  E   + D + ++
Sbjct: 1   ARRNAIRKTWMNKGNS-----EGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVD 55

Query: 207 HIEGYHELSAKTKIFFSTAVAKWD-ADFYVKVDDDVHVN 244
             + Y  L+ KT      AV+K   A +  K+DDDV+  
Sbjct: 56  FEDTYENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFF 94

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)

 Score = 97.0 bits (242), Expect = 6e-26
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 15/101 (14%)

Query: 12  STKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC--AKKAFQD 69
           S KW+  +C F F  G+L +N  W  PES+G     V+  E ++ + S DC   KK    
Sbjct: 1   SRKWVLLLCFFSFFAGLLVTNRLWTLPESNG-----VQDAENRLQLVSEDCDRKKKESDQ 55

Query: 70  QDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRS 110
           +D+  EV  T  AI        ++LDKTI  L+MELAA+RS
Sbjct: 56  KDIMGEVSDTHEAI--------QSLDKTISSLEMELAAARS 88

This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF13334	95	DUF4094: Domain of unknown function (DUF4094)	99.98
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	99.96
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	99.96
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	99.95
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.9
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	98.78
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	98.6
PLN03153	537	hypothetical protein; Provisional	96.43
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	85.87
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	85.82
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	81.47
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	80.03

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=8.3e-67  Score=497.47  Aligned_cols=240  Identities=55%  Similarity=0.861  Sum_probs=217.4

Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccccchhhhccccchhc-------cCChhHHHHHHHh
Q 024861            6 STTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKK-------AFQDQDVAKEVLK   78 (261)
Q Consensus         6 ~~~~~~~~~~~~~l~~~~~~~~~~~~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~   78 (261)
                      ++|+.||+||+++||++|||+|+|||||||..||+++ +..+..+++++++++++||++|       +.+++|+|+||++
T Consensus        11 ~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~   89 (408)
T PLN03193         11 SSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKG-ISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDSKDIIGEVSK   89 (408)
T ss_pred             cccccccHHHHHHHHHHHHHHHHhhccccccCCcccc-ccccccchhhhhhhhccccccccccccccccchhHHHHHHhh
Confidence            4588999999999999999999999999999999887 5555568899999999999853       3589999999999


Q ss_pred             hhcccccCCcccchhhhhhHHHHHHHHhhhccCCCCCCCCCCccc----cCCCCCCCCeeEEEEEeCCCCCHHHHHHHHh
Q 024861           79 TRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAAN----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRD  154 (261)
Q Consensus        79 t~~~i~~~~~~~~~~~~k~~~~lemela~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lvI~V~Sap~n~~rR~aIR~  154 (261)
                      ||+||+        +|||+|++||||||+||+.++.. .++.|.+    ......++++++||+|+|+|+|++||++||+
T Consensus        90 t~~~~~--------~~~~~~~~le~el~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         90 THNAIQ--------TLDKTISNLEMELAAARAAQESI-LNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             HHHHHH--------HHhhhhhHHhHHHHHHHhhhhhh-ccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            999999        99999999999999999987754 5555543    1233567789999999999999999999999


Q ss_pred             hhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEeccCCCCChHHHHHHHHHHHhhcCCccEE
Q 024861          155 TWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY  234 (261)
Q Consensus       155 TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~~~~~adF~  234 (261)
                      |||++++.+.+++..++++++||||++.++++.++++|++|+++|||||++||+|+|.|||.||+++|+|+.++|+|+||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99998877777877899999999999987678899999999999999999999999999999999999999999999999


Q ss_pred             EEeCCceEEehHHHHHHHhhc
Q 024861          235 VKVDDDVHVNLGICFCNLSIL  255 (261)
Q Consensus       235 lKvDDDvfVnl~~L~~~L~~~  255 (261)
                      +|+|||+|||+++|+.+|+++
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~  261 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRH  261 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhc
Confidence            999999999999999999765

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.2e-34  Score=259.93  Aligned_cols=126  Identities=66%  Similarity=0.951  Sum_probs=121.7

Q ss_pred             CCCeeEEEEEeCCCCCHHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEe-cc
Q 024861          130 RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HI  208 (261)
Q Consensus       130 ~~~~~lvI~V~Sap~n~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld-~~  208 (261)
                      +++++++|||.|+|++.+||+++|+||||.++.++++++++||.+|||||+ ++.+++++++|++|+++|+|+|+|| |+
T Consensus         8 ~~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~-~~~g~~~~r~ie~E~~~~~DfllLd~h~   86 (274)
T KOG2288|consen    8 RRKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGT-ATLGASLDRALEEENAQHGDFLLLDRHE   86 (274)
T ss_pred             ccceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEecc-CCccHHHHHHHHHHHHhcCCeEeechhH
Confidence            779999999999999999999999999999999999999999999999999 4578999999999999999999999 99


Q ss_pred             CCCCChHHHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHhhcc
Q 024861          209 EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILL  256 (261)
Q Consensus       209 DsY~nLt~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~~~p  256 (261)
                      |+|.+|+.||+.+|.||+++|+++||+|+|||+|||++.|...|++|+
T Consensus        87 E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r  134 (274)
T KOG2288|consen   87 EAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLARLGTLLARER  134 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceEEEEccccceecHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999764

>PF13334 DUF4094: Domain of unknown function (DUF4094)

Probab=99.98  E-value=4.5e-33  Score=219.51  Aligned_cols=91  Identities=42%  Similarity=0.706  Sum_probs=83.0

Q ss_pred             cchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccc-cccccchhhhccccchhc---cCChhHHHHHHHhhhcccccCC
Q 024861           12 STKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLN-VRRREQQVAVASTDCAKK---AFQDQDVAKEVLKTRGAIHDGS   87 (261)
Q Consensus        12 ~~~~~~~l~~~~~~~~~~~~~r~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~t~~~i~~~~   87 (261)
                      |+||+++||+||||+|+|||||||..||+++ +.+. .+..+++++++++||++|   +.+++|+|+||+|||++||   
T Consensus         1 S~kw~l~Lc~~SF~~G~lft~R~W~~pe~~~-~~~~~~~~~~~~l~l~s~~c~~k~~~~~~~~di~~eV~kTh~aIq---   76 (95)
T PF13334_consen    1 SRKWVLLLCIASFCAGMLFTNRMWTVPESKE-ISRRSSQDAEERLQLVSEDCDPKKLKESDQRDIMGEVSKTHEAIQ---   76 (95)
T ss_pred             CchHHHHHHHHHHHHHHHHhcccccCCcccc-chhhhccccccccccccccccccccccCCccchhHHHHHHHHHHH---
Confidence            6799999999999999999999999999987 5544 457789999999999965   4799999999999999999   


Q ss_pred             cccchhhhhhHHHHHHHHhhhccC
Q 024861           88 VESDRTLDKTIGQLQMELAASRSG  111 (261)
Q Consensus        88 ~~~~~~~~k~~~~lemela~~~~~  111 (261)
                           +|||+||+||||||+||++
T Consensus        77 -----~LdKtIS~LEMELAaARa~   95 (95)
T PF13334_consen   77 -----SLDKTISSLEMELAAARAE   95 (95)
T ss_pred             -----HHHHHHHHHHHHHHHHhcC
Confidence                 9999999999999999983

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=99.96  E-value=1.2e-29  Score=254.14  Aligned_cols=120  Identities=23%  Similarity=0.356  Sum_probs=108.8

Q ss_pred             CCCCeeEEEEEeCCCCCHHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEecc
Q 024861          129 RRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI  208 (261)
Q Consensus       129 ~~~~~~lvI~V~Sap~n~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~  208 (261)
                      +.++++|+|+|+|+|+|++||++||+|||+...    . ...++.++|++|.+.  ++.++..|++|+++|||||++||.
T Consensus       381 ~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~----~-~~~~v~~rFvVG~s~--n~~l~~~L~~Ea~~ygDIIq~dF~  453 (636)
T PLN03133        381 PKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDA----V-RSGAVAVRFFVGLHK--NQMVNEELWNEARTYGDIQLMPFV  453 (636)
T ss_pred             CCCceEEEEEEeCCcccHHHHHHHHHhhccccc----c-CCCceEEEEEEecCC--cHHHHHHHHHHHHHcCCeEEEeee
Confidence            356789999999999999999999999998642    1 245689999999986  467899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHhhc
Q 024861          209 EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSIL  255 (261)
Q Consensus       209 DsY~nLt~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~~~  255 (261)
                      |+|+|||+||++++.|+..|++++|++|+|||+|||+++|+.+|+..
T Consensus       454 DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~  500 (636)
T PLN03133        454 DYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRT  500 (636)
T ss_pred             chhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhc
Confidence            99999999999999999989999999999999999999999999764

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.7e-28  Score=231.63  Aligned_cols=118  Identities=25%  Similarity=0.374  Sum_probs=109.2

Q ss_pred             CeeEEEEEeCCCCCHHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEeccCCC
Q 024861          132 KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGY  211 (261)
Q Consensus       132 ~~~lvI~V~Sap~n~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~DsY  211 (261)
                      .++++++|.|++++++||++||+|||+...     ..+..++++|++|.+++.+ .++..+.+|++.|||||+.||.|+|
T Consensus        94 ~~~lLl~V~S~~~~farR~aiR~TW~~~~~-----v~~~~v~~~FLvG~~~~~~-~~~~~l~~Ea~~ygDIi~~df~Dty  167 (349)
T KOG2287|consen   94 PPELLLLVKSAPDNFARRNAIRKTWGNENN-----VRGGRVRVLFLVGLPSNED-KLNKLLADEARLYGDIIQVDFEDTY  167 (349)
T ss_pred             CceEEEEEecCCCCHHHHHHHHHHhcCccc-----cCCCcEEEEEEecCCCcHH-HHHHHHHHHHHHhCCEEEEecccch
Confidence            489999999999999999999999999863     2356799999999987644 6788999999999999999999999


Q ss_pred             CChHHHHHHHHHHHhh-cCCccEEEEeCCceEEehHHHHHHHhhc
Q 024861          212 HELSAKTKIFFSTAVA-KWDADFYVKVDDDVHVNLGICFCNLSIL  255 (261)
Q Consensus       212 ~nLt~Ktl~~f~wa~~-~~~adF~lKvDDDvfVnl~~L~~~L~~~  255 (261)
                      +|||+|+++++.|+.. |++|+|++|+|||+|||+++|..+|..+
T Consensus       168 ~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~  212 (349)
T KOG2287|consen  168 FNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKL  212 (349)
T ss_pred             hchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhcc
Confidence            9999999999999998 7799999999999999999999999988

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.95  E-value=7.1e-28  Score=208.08  Aligned_cols=104  Identities=31%  Similarity=0.447  Sum_probs=94.9

Q ss_pred             HHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEeccCCCCChHHHHHHHHHHHh
Q 024861          147 KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAV  226 (261)
Q Consensus       147 ~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~DsY~nLt~Ktl~~f~wa~  226 (261)
                      +||++||+||++...     ....++.++||+|.+++.+..++..|.+|+++|+|||++||.|+|+|||+|++++|+|+.
T Consensus         1 ~rR~~IR~TW~~~~~-----~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~   75 (195)
T PF01762_consen    1 ERRQAIRETWGNQRN-----FKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWAS   75 (195)
T ss_pred             ChHHHHHHHHhcccc-----cCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHH
Confidence            589999999999753     124789999999999865678888999999999999999999999999999999999999


Q ss_pred             hcC-CccEEEEeCCceEEehHHHHHHHhhc
Q 024861          227 AKW-DADFYVKVDDDVHVNLGICFCNLSIL  255 (261)
Q Consensus       227 ~~~-~adF~lKvDDDvfVnl~~L~~~L~~~  255 (261)
                      ++| +++|++|+|||+|||+++|..+|..+
T Consensus        76 ~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~  105 (195)
T PF01762_consen   76 KHCPNAKYVLKVDDDVFVNPDRLVSFLKSL  105 (195)
T ss_pred             hhCCchhheeecCcEEEEehHHhhhhhhhc
Confidence            955 59999999999999999999999987

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.90  E-value=9.3e-24  Score=200.27  Aligned_cols=129  Identities=19%  Similarity=0.316  Sum_probs=113.6

Q ss_pred             CCCCeeEEEEEeCCCCC--HHHHHHHHhhhcCCcc-hhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEE
Q 024861          129 RRPKVFVVIGINTAFSS--RKRRDSVRDTWMPQGE-KLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRL  205 (261)
Q Consensus       129 ~~~~~~lvI~V~Sap~n--~~rR~aIR~TW~~~~~-~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~l  205 (261)
                      .++++++++||.|..++  +.||++.|+||++-.. +.+.+.....+.++|++|.+++.+-+.+.++.+|+++|||||++
T Consensus        76 ~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVil  155 (382)
T PTZ00210         76 KAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITL  155 (382)
T ss_pred             ccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEE
Confidence            46789999999999998  8999999999998542 33344445668889999999887779999999999999999999


Q ss_pred             ec------------------cCCCCChHHHHHHHHHHHhh-cCCccEEEEeCCceEEehHHHHHHHhhccc
Q 024861          206 EH------------------IEGYHELSAKTKIFFSTAVA-KWDADFYVKVDDDVHVNLGICFCNLSILLF  257 (261)
Q Consensus       206 d~------------------~DsY~nLt~Ktl~~f~wa~~-~~~adF~lKvDDDvfVnl~~L~~~L~~~p~  257 (261)
                      ||                  .|+|.++|.||+++|+|+.. |++++|++|+|||+|||++.++++|+..|.
T Consensus       156 pf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~pr  226 (382)
T PTZ00210        156 PTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVMPR  226 (382)
T ss_pred             ecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhCCC
Confidence            99                  67778899999999999999 559999999999999999999999987764

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=98.78  E-value=1.1e-08  Score=93.04  Aligned_cols=104  Identities=18%  Similarity=0.224  Sum_probs=57.0

Q ss_pred             eEEEEEeCCCCCHHHH-HHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEeccCCCC
Q 024861          134 FVVIGINTAFSSRKRR-DSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYH  212 (261)
Q Consensus       134 ~lvI~V~Sap~n~~rR-~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~DsY~  212 (261)
                      .++|+|+|++.+.+.| .+|++||++...         ..  .|+.....      +..+..+  ...+++.-+...++.
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~---------~~--~~ifsd~~------d~~l~~~--~~~~l~~~~~~~~~~   67 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCN---------KQ--TFIFSDAE------DPSLPTV--TGVHLVNPNCDAGHC   67 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSG---------GG--EEEEESS--------HHHHHH--HGGGEEE--------
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcC---------Cc--eEEecCcc------ccccccc--cccccccCCCcchhh
Confidence            6899999999876555 999999999763         11  34332221      1222222  223444444555554


Q ss_pred             ChHHHHHHHHHHHhh-cCCccEEEEeCCceEEehHHHHHHHhhcc
Q 024861          213 ELSAKTKIFFSTAVA-KWDADFYVKVDDDVHVNLGICFCNLSILL  256 (261)
Q Consensus       213 nLt~Ktl~~f~wa~~-~~~adF~lKvDDDvfVnl~~L~~~L~~~p  256 (261)
                      ...++.++.+.+... ..+++|++++|||+||++++|..+|..+.
T Consensus        68 ~~~~~~~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~  112 (252)
T PF02434_consen   68 RKTLSCKMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYD  112 (252)
T ss_dssp             -----HHHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-
T ss_pred             HHHHHHHHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCC
Confidence            444455544444322 35889999999999999999999999865

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=98.60  E-value=9.1e-08  Score=91.76  Aligned_cols=102  Identities=25%  Similarity=0.314  Sum_probs=80.5

Q ss_pred             CCCCeeEEEEEeCCCCCHHHH-HHHHhhhcCCcchhhhhhcCCCEEEEEEe---ecCCCCCchhHHhhHHhhhcCCCeEE
Q 024861          129 RRPKVFVVIGINTAFSSRKRR-DSVRDTWMPQGEKLIQLEREKGIIIRFMI---GHSATSNSILDKAIDSEDAQHKDFLR  204 (261)
Q Consensus       129 ~~~~~~lvI~V~Sap~n~~rR-~aIR~TW~~~~~~l~kLe~~~gi~vrFVI---G~s~~~~~~l~~~I~~E~~~ygDIL~  204 (261)
                      -.++..+++.|+|++.+...| +.+=+||++.++        ++   .|+-   +..              ...+. .|.
T Consensus        87 l~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~--------~~---~f~s~~~s~~--------------~~~f~-~v~  140 (364)
T KOG2246|consen   87 LSRSGRVLCWVLTSPMRHVTRADAVKETWLKRCD--------KG---IFFSPTLSKD--------------DSRFP-TVY  140 (364)
T ss_pred             cCCCceEEEEEEecCcCceeehhhhhcccccccC--------cc---eecCccCCCC--------------CCcCc-eee
Confidence            356778999999999888777 699999998864        22   2333   221              11122 336


Q ss_pred             EeccCCCCChHHHHHHHHHHHhhc--CCccEEEEeCCceEEehHHHHHHHhhcc
Q 024861          205 LEHIEGYHELSAKTKIFFSTAVAK--WDADFYVKVDDDVHVNLGICFCNLSILL  256 (261)
Q Consensus       205 ld~~DsY~nLt~Ktl~~f~wa~~~--~~adF~lKvDDDvfVnl~~L~~~L~~~p  256 (261)
                      .+..|+|+++..||..+|++...+  -+++|++|+|||+|+.+++|..+|..+.
T Consensus       141 ~~~~~g~~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yD  194 (364)
T KOG2246|consen  141 YNLPDGYRSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYD  194 (364)
T ss_pred             ccCCcchHHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcC
Confidence            788999999999999999999853  4899999999999999999999999864

>PLN03153 hypothetical protein; Provisional

Probab=96.43  E-value=0.013  Score=59.00  Aligned_cols=113  Identities=19%  Similarity=0.171  Sum_probs=60.0

Q ss_pred             CCCeeEEEEEeCCCCCHH-HHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEecc
Q 024861          130 RPKVFVVIGINTAFSSRK-RRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI  208 (261)
Q Consensus       130 ~~~~~lvI~V~Sap~n~~-rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~  208 (261)
                      ..--.++++|.++....+ |+..|+.+|.+..        -.|  .+|+.....+.  ..+..+-. ...-.|.=.+.+ 
T Consensus       119 t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~--------~rg--~v~ld~~~~~~--~~~~~~P~-i~is~d~s~f~y-  184 (537)
T PLN03153        119 LSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQ--------MRG--HVWLEEQVSPE--EGDDSLPP-IMVSEDTSRFRY-  184 (537)
T ss_pred             CccccEEEEEEEchhhhhhhhhhhhhhcCccc--------cee--EEEecccCCCC--CCcCCCCC-EEeCCCcccccc-
Confidence            334578999999988775 5599999999753        112  23443332110  00000000 000011101111 


Q ss_pred             CCCCChHHHHHH--HHHHHhh--cCCccEEEEeCCceEEehHHHHHHHhhcc
Q 024861          209 EGYHELSAKTKI--FFSTAVA--KWDADFYVKVDDDVHVNLGICFCNLSILL  256 (261)
Q Consensus       209 DsY~nLt~Ktl~--~f~wa~~--~~~adF~lKvDDDvfVnl~~L~~~L~~~p  256 (261)
                      +...+.......  +...+..  .++++||+++|||+|+.+++|+.+|..+.
T Consensus       185 ~~~~Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YD  236 (537)
T PLN03153        185 TNPTGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYD  236 (537)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcC
Confidence            111122221111  2222223  57999999999999999999999998754

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=85.87  E-value=4  Score=34.64  Aligned_cols=105  Identities=12%  Similarity=0.068  Sum_probs=50.8

Q ss_pred             EEEEEeCCCCCHHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCe--EEEeccCCCC
Q 024861          135 VVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDF--LRLEHIEGYH  212 (261)
Q Consensus       135 lvI~V~Sap~n~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDI--L~ld~~DsY~  212 (261)
                      +.|+|.+.-....-++.++.--...        . ..+.+.++...+.   +.....+++-.+.|...  -.+...   .
T Consensus         3 v~Vvip~~~~~~~l~~~l~sl~~~~--------~-~~~~v~vvd~~~~---~~~~~~~~~~~~~~~~~~v~vi~~~---~   67 (228)
T PF13641_consen    3 VSVVIPAYNEDDVLRRCLESLLAQD--------Y-PRLEVVVVDDGSD---DETAEILRALAARYPRVRVRVIRRP---R   67 (228)
T ss_dssp             EEEE--BSS-HHHHHHHHHHHTTSH--------H-HTEEEEEEEE-SS---S-GCTTHHHHHHTTGG-GEEEEE------
T ss_pred             EEEEEEecCCHHHHHHHHHHHHcCC--------C-CCeEEEEEECCCC---hHHHHHHHHHHHHcCCCceEEeecC---C
Confidence            5566666555445555555544321        1 2255544443332   23333455545556543  223222   2


Q ss_pred             ChH--HHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHhhc
Q 024861          213 ELS--AKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSIL  255 (261)
Q Consensus       213 nLt--~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~~~  255 (261)
                      |..  .|.. .+.++.+..+.+|++.+|||+.+..+.|..++...
T Consensus        68 ~~g~~~k~~-a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~  111 (228)
T PF13641_consen   68 NPGPGGKAR-ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAF  111 (228)
T ss_dssp             -HHHHHHHH-HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHH
T ss_pred             CCCcchHHH-HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHH
Confidence            232  2333 45666666789999999999999999888877654

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=85.82  E-value=21  Score=34.02  Aligned_cols=34  Identities=15%  Similarity=0.008  Sum_probs=25.4

Q ss_pred             HHHHHhh-cCCccEEEEeCCceEEehHHHHHHHhh
Q 024861          221 FFSTAVA-KWDADFYVKVDDDVHVNLGICFCNLSI  254 (261)
Q Consensus       221 ~f~wa~~-~~~adF~lKvDDDvfVnl~~L~~~L~~  254 (261)
                      +++.+.+ ..+.+|++..|+|+.+..+.|...++.
T Consensus       123 g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~  157 (384)
T TIGR03469       123 GIAAARTLAPPADYLLLTDADIAHGPDNLARLVAR  157 (384)
T ss_pred             HHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHH
Confidence            5555543 234899999999999998887777653

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=81.47  E-value=25  Score=29.31  Aligned_cols=52  Identities=17%  Similarity=0.097  Sum_probs=35.3

Q ss_pred             CCCeEEEeccCCCCChHHHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHh
Q 024861          199 HKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLS  253 (261)
Q Consensus       199 ygDIL~ld~~DsY~nLt~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~  253 (261)
                      +.-+..++..+.+ +. .|. .++.++......+|++.+|+|..+..+.|..++.
T Consensus        54 ~~~v~~~~~~~~~-~~-g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~~  105 (229)
T cd04192          54 NFQLKILNNSRVS-IS-GKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLLTFVA  105 (229)
T ss_pred             CcceEEeeccCcc-cc-hhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHHHHHH
Confidence            3445666554422 22 333 3346666667899999999999999888888776

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=80.03  E-value=38  Score=32.03  Aligned_cols=108  Identities=13%  Similarity=0.076  Sum_probs=57.7

Q ss_pred             eeEEEEEeCCCCCHHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCC--eEEEeccCC
Q 024861          133 VFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKD--FLRLEHIEG  210 (261)
Q Consensus       133 ~~lvI~V~Sap~n~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygD--IL~ld~~Ds  210 (261)
                      +.+-|+|.+.-....-.+.++ +...+.        -..+.|.|+...+.  ++.. ..+++=.++|.+  +..+.-.+.
T Consensus        41 p~VSViiP~~nee~~l~~~L~-Sl~~q~--------Yp~~EIivvdd~s~--D~t~-~iv~~~~~~~p~~~i~~v~~~~~  108 (373)
T TIGR03472        41 PPVSVLKPLHGDEPELYENLA-SFCRQD--------YPGFQMLFGVQDPD--DPAL-AVVRRLRADFPDADIDLVIDARR  108 (373)
T ss_pred             CCeEEEEECCCCChhHHHHHH-HHHhcC--------CCCeEEEEEeCCCC--CcHH-HHHHHHHHhCCCCceEEEECCCC
Confidence            345555665554444445554 233322        12366766665443  2222 223322345665  322321111


Q ss_pred             CCChHHHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHhh
Q 024861          211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSI  254 (261)
Q Consensus       211 Y~nLt~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~~  254 (261)
                       .....|.-...+ +.+..+.+|++..|+|+.+..+.|...+..
T Consensus       109 -~G~~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~  150 (373)
T TIGR03472       109 -HGPNRKVSNLIN-MLPHARHDILVIADSDISVGPDYLRQVVAP  150 (373)
T ss_pred             -CCCChHHHHHHH-HHHhccCCEEEEECCCCCcChhHHHHHHHH
Confidence             122346544433 445568999999999999999988877654

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	261
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.25

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.25  E-value=1.7e-11  Score=111.28  Aligned_cols=106  Identities=21%  Similarity=0.245  Sum_probs=74.5

Q ss_pred             CCeeEEEEEeCCCCC-HHHHHHHHhhhcCCcchhhhhhcCCCEEEEEEeecCCCCCchhHHhhHHhhhcCCCeEEEecc-
Q 024861          131 PKVFVVIGINTAFSS-RKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI-  208 (261)
Q Consensus       131 ~~~~lvI~V~Sap~n-~~rR~aIR~TW~~~~~~l~kLe~~~gi~vrFVIG~s~~~~~~l~~~I~~E~~~ygDIL~ld~~-  208 (261)
                      ..-.|+|+|+|++.+ ..|+.+||+||++...        ..   .||.+...  +..+    ...  ..++++..++. 
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~--------~~---~fifsd~~--d~~l----~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR--------QQ---TFIFTDSP--DERL----QER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSG--------GG---EEEEESSC--CHHH----HHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCC--------Cc---eEEEcCCC--cccc----ccc--ccccceeccccc
Confidence            345788999999985 5688999999998642        11   24444332  2222    221  24568877763 


Q ss_pred             -CCCCChHHHHHHHHHHHhhcCCccEEEEeCCceEEehHHHHHHHhhcc
Q 024861          209 -EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGICFCNLSILL  256 (261)
Q Consensus       209 -DsY~nLt~Ktl~~f~wa~~~~~adF~lKvDDDvfVnl~~L~~~L~~~p  256 (261)
                       +++.+++.|+...|.+.. ..+++|++|+|||+|||+++|..+|..+.
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d  119 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFP  119 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSC
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCC
Confidence             467889999999888754 25999999999999999999999998753

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00