Citrus Sinensis ID: 024897

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAPKPEEEKKQ
cccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccHHHHcc
ccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccc
maapspreeNVYMAKLAEQAERYEEMVQYMEKVVASastgeeltVEERNLLSVAYKNVIGARRASWRIVSSIEQkeesrgnqdHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIanaelapthpirlgLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDtlgedsykdSTLIMQLLRDNLTlwtsdmqddgtdeikeapkpeeekkq
maapspreenvyMAKLAEQAERYEEMVQYMEKVVASastgeeltvEERNLLSVAYKnvigarrasWRIVSSieqkeesrgnqdhvsVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWtsdmqddgtdeikeapkpeeekkq
MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIkeapkpeeekkQ
************************EMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS*************VSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWT***********************
*****PR**NVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRI*****************SVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLT**************************
*********NVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSS************HVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIK***********
*******EENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTS**********************
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MAAPSPREENVYxxxxxxxxxxxxxxxxxxxxxVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAPKPEEEKKQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query261 2.2.26 [Sep-21-2011]
P93211258 14-3-3 protein 6 OS=Solan N/A no 0.969 0.980 0.889 1e-131
P93784258 14-3-3-like protein 16R O N/A no 0.965 0.976 0.893 1e-131
O65352259 14-3-3-like protein OS=He N/A no 0.984 0.992 0.852 1e-130
P29307260 14-3-3-like protein OS=Oe N/A no 0.977 0.980 0.859 1e-128
P46266260 14-3-3-like protein OS=Pi N/A no 0.984 0.988 0.849 1e-127
P93343260 14-3-3-like protein C OS= N/A no 0.980 0.984 0.852 1e-127
O49998258 14-3-3-like protein F OS= N/A no 0.977 0.988 0.847 1e-126
Q01525259 14-3-3-like protein GF14 yes no 0.977 0.984 0.860 1e-126
O49995255 14-3-3-like protein B OS= N/A no 0.969 0.992 0.853 1e-126
P93210255 14-3-3 protein 5 OS=Solan N/A no 0.969 0.992 0.858 1e-125
>sp|P93211|14336_SOLLC 14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2 Back     alignment and function desciption
 Score =  467 bits (1202), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/254 (88%), Positives = 241/254 (94%), Gaps = 1/254 (0%)

Query: 5   SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRA 64
           SPREENVYMAKLAEQAERYEEMV++MEKVVA+A   EELTVEERNLLSVAYKNVIGARRA
Sbjct: 3   SPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRA 62

Query: 65  SWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSK 124
           SWRI+SSIEQKEESRGN+DHV+ IKEYRSKIE+ELT IC GILKLLD KL+ +AA  DSK
Sbjct: 63  SWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSK 122

Query: 125 VFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFS 184
           VFYLKMKGDYHRYLAEFKTG ERK AAENTL+AYK+AQDIANAELAPTHPIRLGLALNFS
Sbjct: 123 VFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFS 182

Query: 185 VFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDD 244
           VFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQDD
Sbjct: 183 VFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 242

Query: 245 GTDEIKEA-PKPEE 257
           GTDEIKEA PKP++
Sbjct: 243 GTDEIKEATPKPDD 256

Solanum lycopersicum (taxid: 4081)
>sp|P93784|14335_SOLTU 14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|O65352|1433_HELAN 14-3-3-like protein OS=Helianthus annuus PE=2 SV=1 Back     alignment and function description
>sp|P29307|1433_OENEH 14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2 Back     alignment and function description
>sp|P46266|1433_PEA 14-3-3-like protein OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|P93343|1433C_TOBAC 14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|O49998|1433F_TOBAC 14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q01525|14332_ARATH 14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=2 SV=2 Back     alignment and function description
>sp|O49995|1433B_TOBAC 14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P93210|14335_SOLLC 14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
164652940261 14-3-3d protein [Gossypium hirsutum] 0.996 0.996 0.876 1e-131
164652938261 14-3-3c protein [Gossypium hirsutum] 1.0 1.0 0.865 1e-131
335356251261 14-3-3-like protein 2 [Gossypium hirsutu 1.0 1.0 0.869 1e-131
42491254258 14-3-3 protein [Nicotiana tabacum] gi|44 0.980 0.992 0.886 1e-130
23558747258 14-3-3 protein [Nicotiana tabacum] 0.980 0.992 0.882 1e-130
350538649258 14-3-3 protein 6 [Solanum lycopersicum] 0.969 0.980 0.889 1e-129
3023190258 RecName: Full=14-3-3-like protein 16R gi 0.965 0.976 0.893 1e-129
5902676259 RecName: Full=14-3-3-like protein gi|315 0.984 0.992 0.852 1e-128
359492889260 PREDICTED: 14-3-3 protein [Vitis vinifer 0.988 0.992 0.853 1e-128
356515770259 PREDICTED: 14-3-3-like protein-like [Gly 0.980 0.988 0.864 1e-128
>gi|164652940|gb|ABY65003.1| 14-3-3d protein [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/260 (87%), Positives = 244/260 (93%)

Query: 1   MAAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIG 60
           MA PSPREENVYMAKLAEQAERYEEMV++ME VV++    +EL+VEERNLLSVAYKNVIG
Sbjct: 1   MATPSPREENVYMAKLAEQAERYEEMVKFMENVVSAVPAPDELSVEERNLLSVAYKNVIG 60

Query: 61  ARRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAA 120
           ARRASWRIVSSIEQKEE RGN DHV+VI++YR+KIEAEL+EIC GILKLLD+KLVPAA  
Sbjct: 61  ARRASWRIVSSIEQKEEGRGNADHVAVIRDYRAKIEAELSEICAGILKLLDEKLVPAAGN 120

Query: 121 ADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLA 180
            DSKVFYLKMKGDYHRYLAEFKTGD+RK AAENTL AYKSAQDIA AELAPTHPIRLGLA
Sbjct: 121 GDSKVFYLKMKGDYHRYLAEFKTGDDRKSAAENTLTAYKSAQDIAVAELAPTHPIRLGLA 180

Query: 181 LNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSD 240
           LNFSVFYYEILNSPDRAC+LAKQAFDEAI+ELDTLGEDSYKDSTLIMQLLRDNLTLWTSD
Sbjct: 181 LNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSD 240

Query: 241 MQDDGTDEIKEAPKPEEEKK 260
           MQDDGTDEIKEA KPEEEK+
Sbjct: 241 MQDDGTDEIKEASKPEEEKQ 260

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|164652938|gb|ABY65002.1| 14-3-3c protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|335356251|gb|AEH50082.1| 14-3-3-like protein 2 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|42491254|dbj|BAD10939.1| 14-3-3 protein [Nicotiana tabacum] gi|44917159|dbj|BAD12180.1| 14-3-3 h-1 protein [Nicotiana tabacum] gi|44917161|dbj|BAD12181.1| 14-3-3 h-2 protein [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|23558747|emb|CAC84142.3| 14-3-3 protein [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|350538649|ref|NP_001234097.1| 14-3-3 protein 6 [Solanum lycopersicum] gi|26454608|sp|P93211.2|14336_SOLLC RecName: Full=14-3-3 protein 6 gi|15637112|gb|AAL04424.1| 14-3-3 family protein [Solanum lycopersicum] gi|22095154|emb|CAA65149.2| 14-3-3 protein [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|3023190|sp|P93784.1|14335_SOLTU RecName: Full=14-3-3-like protein 16R gi|1888459|emb|CAA72381.1| 14-3-3 protein [Solanum tuberosum] gi|17979213|gb|AAL50217.1| 14-3-3 protein isoform 16R [Solanum tuberosum] Back     alignment and taxonomy information
>gi|5902676|sp|O65352.1|1433_HELAN RecName: Full=14-3-3-like protein gi|3153902|gb|AAC17447.1| 14-3-3-like protein [Helianthus annuus] Back     alignment and taxonomy information
>gi|359492889|ref|XP_003634479.1| PREDICTED: 14-3-3 protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|356515770|ref|XP_003526571.1| PREDICTED: 14-3-3-like protein-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query261
TAIR|locus:2032060259 GRF2 "general regulatory facto 0.934 0.942 0.869 7e-109
TAIR|locus:2122323318 GRF1 "AT4G09000" [Arabidopsis 0.915 0.751 0.858 1.2e-104
TAIR|locus:2146147268 GRF5 "AT5G16050" [Arabidopsis 0.950 0.925 0.815 4.1e-104
TAIR|locus:2076904265 GRF7 "AT3G02520" [Arabidopsis 0.934 0.920 0.833 6.7e-104
UNIPROTKB|Q06967260 GF14F "14-3-3-like protein GF1 0.942 0.946 0.825 3.7e-103
TAIR|locus:2177386255 GRF3 "general regulatory facto 0.934 0.956 0.808 1.6e-102
DICTYBASE|DDB_G0269138252 fttB "14-3-3-like protein" [Di 0.915 0.948 0.740 1.7e-91
UNIPROTKB|Q5ZMT0255 YWHAE "14-3-3 protein epsilon" 0.915 0.937 0.739 2.5e-90
UNIPROTKB|P62261255 YWHAE "14-3-3 protein epsilon" 0.915 0.937 0.739 2.5e-90
UNIPROTKB|P62258255 YWHAE "14-3-3 protein epsilon" 0.915 0.937 0.739 2.5e-90
TAIR|locus:2032060 GRF2 "general regulatory factor 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 213/245 (86%), Positives = 227/245 (92%)

Query:     5 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRA 64
             S REE VYMAKLAEQAERYEEMV++MEKV A+   G+ELTVEERNLLSVAYKNVIGARRA
Sbjct:     3 SGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVD-GDELTVEERNLLSVAYKNVIGARRA 61

Query:    65 SWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSK 124
             SWRI+SSIEQKEESRGN DHV+ I+EYRSKIE EL+ IC GILKLLD +L+PAAA+ DSK
Sbjct:    62 SWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSK 121

Query:   125 VFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFS 184
             VFYLKMKGDYHRYLAEFKTG ERK AAE+TL AYKSAQDIANAELAPTHPIRLGLALNFS
Sbjct:   122 VFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFS 181

Query:   185 VFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDD 244
             VFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQDD
Sbjct:   182 VFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 241

Query:   245 GTDEI 249
               DEI
Sbjct:   242 AADEI 246
GO:0005737 "cytoplasm" evidence=ISM
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2122323 GRF1 "AT4G09000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146147 GRF5 "AT5G16050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076904 GRF7 "AT3G02520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q06967 GF14F "14-3-3-like protein GF14-F" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2177386 GRF3 "general regulatory factor 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269138 fttB "14-3-3-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMT0 YWHAE "14-3-3 protein epsilon" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P62261 YWHAE "14-3-3 protein epsilon" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P62258 YWHAE "14-3-3 protein epsilon" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q964511433B_SOYBNNo assigned EC number0.75520.90800.9595nono
Q964501433A_SOYBNNo assigned EC number0.8320.95400.9688nono
P426531433A_VICFANo assigned EC number0.83780.98460.9846N/Ano
P4265214334_SOLLCNo assigned EC number0.82620.98850.9923N/Ano
O653521433_HELANNo assigned EC number0.85210.98460.9922N/Ano
Q4141814331_SOLTUNo assigned EC number0.83660.95010.9575N/Ano
Q434701433B_HORVUNo assigned EC number0.79060.97700.9732N/Ano
Q4364314332_SOLTUNo assigned EC number0.83850.96550.9921N/Ano
P4910614331_MAIZENo assigned EC number0.80.97310.9731N/Ano
Q0696714336_ORYSJNo assigned EC number0.82420.97700.9807nono
Q5ZMT01433E_CHICKNo assigned EC number0.72150.96550.9882yesno
Q6EUP414335_ORYSJNo assigned EC number0.80620.97700.9732nono
P529081433_CHLRENo assigned EC number0.74790.93860.9459N/Ano
P622621433E_SHEEPNo assigned EC number0.72150.96550.9882N/Ano
P622601433E_RATNo assigned EC number0.72150.96550.9882yesno
P9321114336_SOLLCNo assigned EC number0.88970.96930.9806N/Ano
P9321014335_SOLLCNo assigned EC number0.85820.96930.9921N/Ano
P932591433_MESCRNo assigned EC number0.82870.98080.9696N/Ano
P4264414333_ARATHNo assigned EC number0.80550.96160.9843nono
P4264514335_ARATHNo assigned EC number0.81880.96930.9440nono
P4264314331_ARATHNo assigned EC number0.84250.95780.9363nono
P546321433_DICDINo assigned EC number0.7360.92720.9603yesno
Q2R2W214334_ORYSJNo assigned EC number0.79241.00.9849nono
Q7XTE814332_ORYSJNo assigned EC number0.80390.97310.9694nono
P933431433C_TOBACNo assigned EC number0.85210.98080.9846N/Ano
P933421433A_TOBACNo assigned EC number0.84310.96930.9921N/Ano
P9378414335_SOLTUNo assigned EC number0.89320.96550.9767N/Ano
Q9SP071433_LILLONo assigned EC number0.83590.97310.9806N/Ano
Q84J5514331_ORYSJNo assigned EC number0.79530.98460.9734nono
P4834914336_ARATHNo assigned EC number0.78180.93100.9798nono
P4834814338_ARATHNo assigned EC number0.76950.93100.9798nono
P462661433_PEANo assigned EC number0.84940.98460.9884N/Ano
P622591433E_MOUSENo assigned EC number0.72150.96550.9882yesno
Q9630014337_ARATHNo assigned EC number0.82550.97310.9584nono
Q0152514332_ARATHNo assigned EC number0.86040.97700.9845yesno
Q0152614332_MAIZENo assigned EC number0.81450.94630.9463N/Ano
O499981433F_TOBACNo assigned EC number0.84700.97700.9883N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.84270.94630.9648yesno
O499961433D_TOBACNo assigned EC number0.74690.92720.9718N/Ano
O499971433E_TOBACNo assigned EC number0.85290.90800.8713N/Ano
O499951433B_TOBACNo assigned EC number0.85370.96930.9921N/Ano
P293081433_SPIOLNo assigned EC number0.86760.78160.9272N/Ano
P9320814332_SOLLCNo assigned EC number0.84580.96550.9921N/Ano
P9320914333_SOLLCNo assigned EC number0.83650.98080.9846N/Ano
P4607714334_ARATHNo assigned EC number0.82770.99610.9737nono
P622581433E_HUMANNo assigned EC number0.72150.96550.9882yesno
P9320614331_SOLLCNo assigned EC number0.74280.92720.9718N/Ano
P9320714310_SOLLCNo assigned EC number0.73680.93100.9642N/Ano
P293051433A_HORVUNo assigned EC number0.81710.97700.9732N/Ano
P293071433_OENEHNo assigned EC number0.85990.97700.9807N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015189001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (260 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00031656001
RecName- Full=Adenosylhomocysteinase; EC=3.3.1.1; (445 aa)
      • 0.483
GSVIVG00015916001
RecName- Full=Adenosylhomocysteinase; EC=3.3.1.1; (444 aa)
      • 0.483
GSVIVG00036860001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (845 aa)
      • 0.480
GSVIVG00036115001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (833 aa)
      • 0.480
GSVIVG00035924001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (846 aa)
      • 0.480
GSVIVG00034182001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (641 aa)
      • 0.480
GSVIVG00034164001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (847 aa)
      • 0.480
GSVIVG00024515001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (846 aa)
      • 0.480
GSVIVG00021720001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (825 aa)
      • 0.480
GSVIVG00019288001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (665 aa)
      • 0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-154
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-151
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-142
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 1e-128
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-127
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-125
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 1e-124
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 1e-102
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 4e-99
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 1e-98
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 2e-91
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 2e-88
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 4e-87
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information 
 Score =  429 bits (1105), Expect = e-154
 Identities = 211/245 (86%), Positives = 228/245 (93%), Gaps = 1/245 (0%)

Query: 7   REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASW 66
           REENVYMAKLAEQAERYEEMV++MEKV  +  + EELTVEERNLLSVAYKNVIGARRASW
Sbjct: 1   REENVYMAKLAEQAERYEEMVEFMEKVAKTVDS-EELTVEERNLLSVAYKNVIGARRASW 59

Query: 67  RIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVF 126
           RI+SSIEQKEESRGN+DHV+ IKEYR KIE EL++IC GILKLL+  L+P+A+AA+SKVF
Sbjct: 60  RIISSIEQKEESRGNEDHVASIKEYRGKIETELSKICDGILKLLESHLIPSASAAESKVF 119

Query: 127 YLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVF 186
           YLKMKGDYHRYLAEFKTG ERK AAENTL AYKSAQDIA AEL PTHPIRLGLALNFSVF
Sbjct: 120 YLKMKGDYHRYLAEFKTGAERKEAAENTLVAYKSAQDIALAELPPTHPIRLGLALNFSVF 179

Query: 187 YYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDGT 246
           YYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSD+QDDG 
Sbjct: 180 YYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDLQDDGA 239

Query: 247 DEIKE 251
           DEIKE
Sbjct: 240 DEIKE 244

14-3-3 homologues mediates signal transduction by binding to phosphoserine-containing proteins. They are involved in growth factor signalling and also interact with MEK kinases. Length = 244
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 261
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 96.1
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 92.68
PF1286294 Apc5: Anaphase-promoting complex subunit 5 91.06
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 90.55
PF04781111 DUF627: Protein of unknown function (DUF627); Inte 82.59
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 81.15
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=9.8e-96  Score=624.93  Aligned_cols=237  Identities=75%  Similarity=1.132  Sum_probs=231.5

Q ss_pred             CCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024897            4 PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQD   83 (261)
Q Consensus         4 ~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~   83 (261)
                      +..|++.+|+|||++||+||++|++-||.++   ..+.+|+.+|||||||||||+||+||+|||++++++||++.+||..
T Consensus         2 s~~rE~svylAkLaeqAERYe~MvenMk~va---s~~~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~~~   78 (268)
T COG5040           2 STSREDSVYLAKLAEQAERYEEMVENMKLVA---SSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTH   78 (268)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCChh
Confidence            3459999999999999999999999999999   6899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 024897           84 HVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQD  163 (261)
Q Consensus        84 ~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~  163 (261)
                      ++.+|+.||++|+.||..||++|+++|++||||.+++.|++|||+|||||||||+|||..|+.+.++.+.+.++|+.|.+
T Consensus        79 qv~lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~Ase  158 (268)
T COG5040          79 QVELIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAASE  158 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcCCCC
Q 024897          164 IANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQD  243 (261)
Q Consensus       164 ~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e~~~  243 (261)
                      +|...||||||||||||||||||||||+|++++||.+||+|||+||++||+|+|++|+|||+||||||||||+||++.++
T Consensus       159 iA~teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLSEEsYkDSTLIMQLLRDNLTLWTSd~e~  238 (268)
T COG5040         159 IATTELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDAEY  238 (268)
T ss_pred             HhhccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhhhhhhcchHHHHHHHHhcceeeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997543

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF04781 DUF627: Protein of unknown function (DUF627); InterPro: IPR006866 This domain represents the N-terminal region of several plant proteins of unknown function Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 1e-123
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 1e-120
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 1e-118
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 1e-116
3axy_C240 Structure Of Florigen Activation Complex Consisting 1e-116
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 8e-99
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 8e-98
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 3e-97
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 4e-91
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 1e-84
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 1e-84
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 1e-84
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 2e-84
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 2e-84
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 3e-83
2o02_A230 Phosphorylation Independent Interactions Between 14 5e-83
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 8e-83
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 6e-82
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 2e-81
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 2e-81
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 8e-81
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 2e-79
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 2e-79
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 7e-79
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 9e-79
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 1e-78
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 2e-78
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 7e-78
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 7e-78
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 7e-78
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 7e-78
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 8e-78
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 8e-78
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 2e-77
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 4e-77
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 4e-13
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure 
Iteration: 1

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/247 (85%), Positives = 230/247 (93%), Gaps = 1/247 (0%)
Query: 3   APSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGAR 62
           AP+ REENVYMAKLAEQAERYEEMV++MEKV  S  + EELTVEERNLLSVAYKNVIGAR
Sbjct: 4   APTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGS-EELTVEERNLLSVAYKNVIGAR 62
Query: 63  RASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAAD 122
           RASWRI+SSIEQKEESRGN++HV+ I+EYRSKIE EL++IC GILKLLD KL+P+AA+ D
Sbjct: 63  RASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGD 122
Query: 123 SKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALN 182
           SKVFYLKMKGDYHRYLAEFKTG ERK AAE+TL AYK+AQDIA  ELAPTHPIRLGLALN
Sbjct: 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALN 182
Query: 183 FSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQ 242
           FSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSDMQ
Sbjct: 183 FSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQ 242
Query: 243 DDGTDEI 249
           DDG DEI
Sbjct: 243 DDGADEI 249
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query261
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 1e-105
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 1e-104
2npm_A260 14-3-3 domain containing protein; cell regulator p 1e-104
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 1e-101
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 1e-100
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 1e-99
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 4e-97
2o8p_A227 14-3-3 domain containing protein; signaling protei 2e-87
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
 Score =  305 bits (781), Expect = e-105
 Identities = 219/258 (84%), Positives = 237/258 (91%), Gaps = 1/258 (0%)

Query: 2   AAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGA 61
            AP+ REENVYMAKLAEQAERYEEMV++MEKV  S    EELTVEERNLLSVAYKNVIGA
Sbjct: 3   VAPTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLG-SEELTVEERNLLSVAYKNVIGA 61

Query: 62  RRASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAA 121
           RRASWRI+SSIEQKEESRGN++HV+ I+EYRSKIE EL++IC GILKLLD KL+P+AA+ 
Sbjct: 62  RRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASG 121

Query: 122 DSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLAL 181
           DSKVFYLKMKGDYHRYLAEFKTG ERK AAE+TL AYK+AQDIA  ELAPTHPIRLGLAL
Sbjct: 122 DSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLAL 181

Query: 182 NFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDM 241
           NFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSDM
Sbjct: 182 NFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 241

Query: 242 QDDGTDEIKEAPKPEEEK 259
           QDDG DEIKE PKP+E K
Sbjct: 242 QDDGADEIKEDPKPDEAK 259
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 93.47
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 93.44
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 93.07
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 92.91
3qww_A433 SET and MYND domain-containing protein 2; methyltr 92.47
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 92.42
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 91.91
3u4t_A272 TPR repeat-containing protein; structural genomics 90.43
3qww_A433 SET and MYND domain-containing protein 2; methyltr 90.07
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 89.81
3u3w_A293 Transcriptional activator PLCR protein; ternary co 89.66
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 89.33
2qfc_A293 PLCR protein; TPR, HTH, transcription regulation; 89.03
3q15_A 378 PSP28, response regulator aspartate phosphatase H; 88.49
4i17_A228 Hypothetical protein; TPR repeats protein, structu 86.7
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 86.28
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 85.84
4g1t_A472 Interferon-induced protein with tetratricopeptide 85.49
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 85.38
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 84.95
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 84.38
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 83.11
2gw1_A 514 Mitochondrial precursor proteins import receptor; 81.1
3rkv_A162 Putative peptidylprolyl isomerase; structural geno 81.03
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 80.55
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
Probab=100.00  E-value=7.1e-98  Score=665.73  Aligned_cols=239  Identities=61%  Similarity=0.973  Sum_probs=223.9

Q ss_pred             CchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcchh
Q 024897            5 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQDH   84 (261)
Q Consensus         5 ~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~~   84 (261)
                      .+|+++||+||||+||||||||+.+||+++   +.+++||.||||||||||||+||+||+|||+|++++|+++.+|++.+
T Consensus         2 ~~re~lv~~AklaeqaeRyddM~~~Mk~v~---~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~   78 (248)
T 3uzd_A            2 VDREQLVQKARLAEQAERYDDMAAAMKNVT---ELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKK   78 (248)
T ss_dssp             CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-
T ss_pred             CcHHHHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHH
Confidence            479999999999999999999999999999   68999999999999999999999999999999999999988888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCc--chHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHH
Q 024897           85 VSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAA--DSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQ  162 (261)
Q Consensus        85 ~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~  162 (261)
                      ++.+++||++|++||..+|++||++||++|||.++++  +++|||+|||||||||+|||..|++|+.++++|++||++|+
T Consensus        79 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~  158 (248)
T 3uzd_A           79 IEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAH  158 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999  99999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcCCC
Q 024897          163 DIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQ  242 (261)
Q Consensus       163 ~~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e~~  242 (261)
                      ++|+.+||||||||||||||||||||||+|+|++||.+|++|||+||++||+|+|++|+|||+||||||||||+||++.+
T Consensus       159 ~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~  238 (248)
T 3uzd_A          159 EISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQ  238 (248)
T ss_dssp             HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCc
Confidence            99998999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCc
Q 024897          243 DDGT  246 (261)
Q Consensus       243 ~~~~  246 (261)
                      ++++
T Consensus       239 ~~~~  242 (248)
T 3uzd_A          239 DDDG  242 (248)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7663
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 261
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 1e-124
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 1e-116
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 4e-99
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 2e-92
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  351 bits (902), Expect = e-124
 Identities = 203/237 (85%), Positives = 220/237 (92%), Gaps = 1/237 (0%)

Query: 4   PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARR 63
           P+ REENVYMAKLAEQAERYEEMV++MEKV  S    EELTVEERNLLSVAYKNVIGARR
Sbjct: 1   PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSL-GSEELTVEERNLLSVAYKNVIGARR 59

Query: 64  ASWRIVSSIEQKEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADS 123
           ASWRI+SSIEQKEESRGN++HV+ I+EYRSKIE EL++IC GILKLLD KL+P+AA+ DS
Sbjct: 60  ASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDS 119

Query: 124 KVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNF 183
           KVFYLKMKGDYHRYLAEFKTG ERK AAE+TL AYK+AQDIA  ELAPTHPIRLGLALNF
Sbjct: 120 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNF 179

Query: 184 SVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSD 240
           SVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 180 SVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query261
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 89.0
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 83.11
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 81.79
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 80.54
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=1.3e-89  Score=609.39  Aligned_cols=236  Identities=86%  Similarity=1.254  Sum_probs=222.9

Q ss_pred             CCchhhHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhcCcch
Q 024897            4 PSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESRGNQD   83 (261)
Q Consensus         4 ~~~r~~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlSvayKn~i~~~R~s~R~l~~ieqke~~~~~~~   83 (261)
                      +.+|+++||+|||++|||||+||+.+||++++. ..+++||.|||||||+||||+||++|+|||+|++++++++..|++.
T Consensus         1 ~~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~-~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~   79 (236)
T d1o9da_           1 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNS-LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE   79 (236)
T ss_dssp             CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred             CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChH
Confidence            467999999999999999999999999999941 1278999999999999999999999999999999999998888888


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccCcchHHHHHHhhcchhhhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 024897           84 HVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQD  163 (261)
Q Consensus        84 ~~~~i~~yr~kie~EL~~~C~eii~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~  163 (261)
                      +++.+++||++|++||..+|++|+++||++|||.+++++++|||+|||||||||+|||.+|+++++++++|.++|++|++
T Consensus        80 ~~~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~  159 (236)
T d1o9da_          80 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQD  159 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCchhHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHhhHhhhhcC
Q 024897          164 IANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEDSYKDSTLIMQLLRDNLTLWTSD  240 (261)
Q Consensus       164 ~a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iAk~afd~Ai~~ld~l~ee~y~ds~~ilqLLrDNl~lW~~e  240 (261)
                      +|+.+||||||+||||+||||||||||+|++++||++|++|||+|++++|++++++|+|+++|||||||||++|++|
T Consensus       160 ~a~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l~ee~~~ds~~i~qLLrdNl~lW~~e  236 (236)
T d1o9da_         160 IATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  236 (236)
T ss_dssp             HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred             HHHhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHhcCC
Confidence            99989999999999999999999999999999999999999999999999999999999999999999999999985
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure